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Search of human proteins with 239751887
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239751887 PREDICTED: hypothetical protein XP_002348022 [Homo
sapiens]
(174 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239757402 PREDICTED: hypothetical protein [Homo sapiens] 369 e-103
gi|239751887 PREDICTED: hypothetical protein XP_002348022 [Homo ... 369 e-103
gi|239746377 PREDICTED: hypothetical protein XP_002343700 [Homo ... 369 e-103
gi|169194701 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007
gi|89031838 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007
gi|89030878 PREDICTED: hypothetical protein [Homo sapiens] 37 0.007
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens] 35 0.025
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ... 35 0.025
gi|239742272 PREDICTED: hypothetical protein XP_002342469 isofor... 35 0.043
gi|239742270 PREDICTED: hypothetical protein XP_002342468 isofor... 35 0.043
gi|113419909 PREDICTED: hypothetical protein [Homo sapiens] 33 0.095
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 33 0.16
gi|169213941 PREDICTED: similar to mCG2980 [Homo sapiens] 32 0.21
gi|169214360 PREDICTED: similar to mCG2980 isoform 1 [Homo sapiens] 32 0.21
gi|169213374 PREDICTED: similar to mCG2980 isoform 1 [Homo sapiens] 32 0.21
gi|51466802 PREDICTED: hypothetical protein [Homo sapiens] 32 0.21
gi|51466800 PREDICTED: hypothetical protein [Homo sapiens] 32 0.21
gi|169172766 PREDICTED: hypothetical protein LOC389630 [Homo sap... 32 0.21
gi|89027843 PREDICTED: hypothetical protein LOC441328 [Homo sapi... 32 0.28
gi|89027820 PREDICTED: hypothetical protein [Homo sapiens] 32 0.28
gi|239757014 PREDICTED: hypothetical protein [Homo sapiens] 32 0.36
gi|169173146 PREDICTED: hypothetical protein [Homo sapiens] 32 0.36
gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo ... 32 0.36
gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo ... 32 0.36
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens] 31 0.47
gi|38569475 metaxin 1 isoform 1 [Homo sapiens] 31 0.62
gi|38569477 metaxin 1 isoform 2 [Homo sapiens] 31 0.62
gi|42658817 PREDICTED: hypothetical protein [Homo sapiens] 30 0.81
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 30 0.81
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 30 0.81
>gi|239757402 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 369 bits (947), Expect = e-103
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE 60
MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE
Sbjct: 1 MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE 60
Query: 61 AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL 120
AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL
Sbjct: 61 AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL 120
Query: 121 QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT 174
QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT
Sbjct: 121 QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT 174
>gi|239751887 PREDICTED: hypothetical protein XP_002348022 [Homo
sapiens]
Length = 174
Score = 369 bits (947), Expect = e-103
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE 60
MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE
Sbjct: 1 MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE 60
Query: 61 AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL 120
AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL
Sbjct: 61 AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL 120
Query: 121 QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT 174
QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT
Sbjct: 121 QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT 174
>gi|239746377 PREDICTED: hypothetical protein XP_002343700 [Homo
sapiens]
Length = 174
Score = 369 bits (947), Expect = e-103
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE 60
MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE
Sbjct: 1 MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE 60
Query: 61 AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL 120
AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL
Sbjct: 61 AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL 120
Query: 121 QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT 174
QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT
Sbjct: 121 QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT 174
>gi|169194701 PREDICTED: hypothetical protein [Homo sapiens]
Length = 139
Score = 37.4 bits (85), Expect = 0.007
Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 2 RARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARL--VQADARGPAPAHTP 59
RAR P GHA P LG T RPRP S++ SA RL + ARGPA + +P
Sbjct: 25 RARPPDCSGGHAPSGFPALGLRTAQ---RPRPFSSSPRSASGRLRGPRPVARGPAHSSSP 81
>gi|89031838 PREDICTED: hypothetical protein [Homo sapiens]
Length = 139
Score = 37.4 bits (85), Expect = 0.007
Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 2 RARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARL--VQADARGPAPAHTP 59
RAR P GHA P LG T RPRP S++ SA RL + ARGPA + +P
Sbjct: 25 RARPPDCSGGHAPSGFPALGLRTAQ---RPRPFSSSPRSASGRLRGPRPVARGPAHSSSP 81
>gi|89030878 PREDICTED: hypothetical protein [Homo sapiens]
Length = 139
Score = 37.4 bits (85), Expect = 0.007
Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 2 RARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARL--VQADARGPAPAHTP 59
RAR P GHA P LG T RPRP S++ SA RL + ARGPA + +P
Sbjct: 25 RARPPDCSGGHAPSGFPALGLRTAQ---RPRPFSSSPRSASGRLRGPRPVARGPAHSSSP 81
>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 35.4 bits (80), Expect = 0.025
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 119 CLQPASVLRPHIHEVW---SRPHP-RRRTPPTRAC-ALRSHPATSRIHRGAARLWKVPPR 173
C PA L+ H EVW S HP R PP+R C L P+ SR +L PPR
Sbjct: 4 CFAPAKFLKRHSKEVWKPSSLIHPARSNQPPSRTCPPLPGPPSRSRSPSSRLKLPADPPR 63
>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
sapiens]
Length = 274
Score = 35.4 bits (80), Expect = 0.025
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 5/60 (8%)
Query: 119 CLQPASVLRPHIHEVW---SRPHP-RRRTPPTRAC-ALRSHPATSRIHRGAARLWKVPPR 173
C PA L+ H EVW S HP R PP+R C L P+ SR +L PPR
Sbjct: 4 CFAPAKFLKRHSKEVWKPSSLIHPARSNQPPSRTCPPLPGPPSRSRSPSSRLKLPADPPR 63
>gi|239742272 PREDICTED: hypothetical protein XP_002342469 isoform 2
[Homo sapiens]
Length = 464
Score = 34.7 bits (78), Expect = 0.043
Identities = 46/171 (26%), Positives = 62/171 (36%), Gaps = 35/171 (20%)
Query: 23 STTSPGLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-------- 70
S+ G R P +A++T + + A+ PA T P A TH+ LG
Sbjct: 231 SSPEGGCREVPQAASKTHGLLQAISPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGA 290
Query: 71 ---WRLALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVR 116
+ + L+ L PF L QPP P+T+ R
Sbjct: 291 KRPAQAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPEYLQPPPATTELGPSTSPQMGR 350
Query: 117 AYCLQPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
Q +SV R PH R P +AC + HPATS H GA L
Sbjct: 351 RTPAQVSSVDR-------QPPHSRPCLPTAQACTMSHHPATS--HDGAQPL 392
>gi|239742270 PREDICTED: hypothetical protein XP_002342468 isoform 1
[Homo sapiens]
Length = 464
Score = 34.7 bits (78), Expect = 0.043
Identities = 46/171 (26%), Positives = 62/171 (36%), Gaps = 35/171 (20%)
Query: 23 STTSPGLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-------- 70
S+ G R P +A++T + + A+ PA T P A TH+ LG
Sbjct: 231 SSPEGGCREVPQAASKTHGLLQAISPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGA 290
Query: 71 ---WRLALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVR 116
+ + L+ L PF L QPP P+T+ R
Sbjct: 291 KRPAQAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPEYLQPPPATTELGPSTSPQMGR 350
Query: 117 AYCLQPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
Q +SV R PH R P +AC + HPATS H GA L
Sbjct: 351 RTPAQVSSVDR-------QPPHSRPCLPTAQACTMSHHPATS--HDGAQPL 392
>gi|113419909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 33.5 bits (75), Expect = 0.095
Identities = 46/168 (27%), Positives = 61/168 (36%), Gaps = 29/168 (17%)
Query: 23 STTSPGLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGDWRLALLFI 78
S+ R P +A++T + V+ A+ PA T P A TH+ LG + L
Sbjct: 231 SSPEGSCREVPQAASKTHGLLQAVRTQAQDKRPAVTSQPCPSAATHSLGLG----SNLSF 286
Query: 79 LSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYC---LQP---ASVLRPHIHE 132
SG P N + P+ F P +T LQP A+ L P
Sbjct: 287 GSGAKRPAQAPIQACLNFPKKPRLGPFQIPESTIQGGELGAPENLQPPPAATELGPSRSP 346
Query: 133 VWSR-------------PHPRRRTPPTRACALRSHPATSRIHRGAARL 167
R PH R P +AC + HPA S H GA L
Sbjct: 347 QMGRRTPAQVPSVERQPPHRRPCLPTAQACTMSHHPAAS--HDGAQPL 392
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 32.7 bits (73), Expect = 0.16
Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 14/71 (19%)
Query: 1 MRARGPAPKQGHAACAH---PPLGDSTTSPGLRPRPLSATRTSAFARLVQADARG----- 52
+ ARG AP C PPLG GLRPRP T R + RG
Sbjct: 85 LAARGTAPPAPPRQCLPTPCPPLGH-----GLRPRPPPGTPPPRCPRTLAPGPRGLFPAP 139
Query: 53 -PAPAHTPEAG 62
PAPA T AG
Sbjct: 140 PPAPARTGPAG 150
>gi|169213941 PREDICTED: similar to mCG2980 [Homo sapiens]
Length = 307
Score = 32.3 bits (72), Expect = 0.21
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 5 GPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLV 46
G AP G A+ A PP GD+T +P L PRP T A +V
Sbjct: 45 GSAPS-GEASGAEPPAGDTTAAP-LAPRPSKEELTRCLAEVV 84
>gi|169214360 PREDICTED: similar to mCG2980 isoform 1 [Homo
sapiens]
Length = 307
Score = 32.3 bits (72), Expect = 0.21
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 5 GPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLV 46
G AP G A+ A PP GD+T +P L PRP T A +V
Sbjct: 45 GSAPS-GEASGAEPPAGDTTAAP-LAPRPSKEELTRCLAEVV 84
>gi|169213374 PREDICTED: similar to mCG2980 isoform 1 [Homo
sapiens]
Length = 307
Score = 32.3 bits (72), Expect = 0.21
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)
Query: 5 GPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLV 46
G AP G A+ A PP GD+T +P L PRP T A +V
Sbjct: 45 GSAPS-GEASGAEPPAGDTTAAP-LAPRPSKEELTRCLAEVV 84
>gi|51466802 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 32.3 bits (72), Expect = 0.21
Identities = 45/166 (27%), Positives = 59/166 (35%), Gaps = 35/166 (21%)
Query: 28 GLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-----------WR 72
G R P +A++T + + A+ PA T P A TH+ LG +
Sbjct: 236 GCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGAKRPAQ 295
Query: 73 LALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVRAYCLQ 121
+ L+ L PF L QPP A P+T+ R Q
Sbjct: 296 APIQACLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPSTSPQMGRRTPAQ 355
Query: 122 PASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
SV R PH R P +AC + HPA S H GA L
Sbjct: 356 VPSVDR-------QPPHSRPCLPTAQACTMSHHPAAS--HDGAQPL 392
>gi|51466800 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 32.3 bits (72), Expect = 0.21
Identities = 45/166 (27%), Positives = 59/166 (35%), Gaps = 35/166 (21%)
Query: 28 GLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-----------WR 72
G R P +A++T + + A+ PA T P A TH+ LG +
Sbjct: 236 GCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGAKRPAQ 295
Query: 73 LALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVRAYCLQ 121
+ L+ L PF L QPP A P+T+ R Q
Sbjct: 296 APIQACLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPSTSPQMGRRTPAQ 355
Query: 122 PASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
SV R PH R P +AC + HPA S H GA L
Sbjct: 356 VPSVDR-------QPPHSRPCLPTAQACTMSHHPAAS--HDGAQPL 392
>gi|169172766 PREDICTED: hypothetical protein LOC389630 [Homo
sapiens]
Length = 464
Score = 32.3 bits (72), Expect = 0.21
Identities = 45/166 (27%), Positives = 59/166 (35%), Gaps = 35/166 (21%)
Query: 28 GLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-----------WR 72
G R P +A++T + + A+ PA T P A TH+ LG +
Sbjct: 236 GCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGAKRPAQ 295
Query: 73 LALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVRAYCLQ 121
+ L+ L PF L QPP A P+T+ R Q
Sbjct: 296 APIQACLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPSTSPQMGRRTPAQ 355
Query: 122 PASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
SV R PH R P +AC + HPA S H GA L
Sbjct: 356 VPSVDR-------QPPHSRPCLPTAQACTMSHHPAAS--HDGAQPL 392
>gi|89027843 PREDICTED: hypothetical protein LOC441328 [Homo
sapiens]
Length = 464
Score = 32.0 bits (71), Expect = 0.28
Identities = 44/171 (25%), Positives = 59/171 (34%), Gaps = 35/171 (20%)
Query: 23 STTSPGLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-------- 70
S+ G R P +A++T + + A+ PA T P A TH+ LG
Sbjct: 231 SSPEGGCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGA 290
Query: 71 ---WRLALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVR 116
+ + L+ L PF L QPP A P+T+ R
Sbjct: 291 KRPAQAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPSTSPQMGR 350
Query: 117 AYCLQPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
Q SV W PH P +AC + HPA H GA L
Sbjct: 351 RTPAQVPSV-------DWQPPHSTPCLPTAQACTMSHHPAAG--HDGAQPL 392
>gi|89027820 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 32.0 bits (71), Expect = 0.28
Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 9/70 (12%)
Query: 98 QPPQFAAFPAPTTTRSRVRAYCLQPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPAT 157
QPP A P+T+ R Q SV R PH R P +AC + HPA
Sbjct: 332 QPPPAATELGPSTSPQMGRRTPAQVPSVDR-------QPPHSRPCLPTAQACTMSHHPAA 384
Query: 158 SRIHRGAARL 167
S H GA L
Sbjct: 385 S--HDGAQPL 392
>gi|239757014 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 31.6 bits (70), Expect = 0.36
Identities = 48/169 (28%), Positives = 62/169 (36%), Gaps = 35/169 (20%)
Query: 15 CAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPEAGTHTGLLGDWRLA 74
C HPP+ +PG+R P A T+ LV + PA AG G +
Sbjct: 88 CKHPPVFQCAVNPGIRAVP--AMDTALLPPLVFFASLSPA------AGIRLG------CS 133
Query: 75 LLFILSGDHVWTLRPFLELFNQTQPPQ--FAA-----FPAPTTTRSRVRAYCLQPASVLR 127
+L DH+ RP + P F+A PA R R RA C + SV+
Sbjct: 134 PSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRERALCGRCCSVVV 193
Query: 128 PHIHEVWSRPHPRRRTPPTRACALR-------------SHPATS-RIHR 162
R R R P + ALR S PA S R+HR
Sbjct: 194 AVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHR 242
>gi|169173146 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 31.6 bits (70), Expect = 0.36
Identities = 45/168 (26%), Positives = 60/168 (35%), Gaps = 29/168 (17%)
Query: 23 STTSPGLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGDWRLALLFI 78
S+ R P +A++T + V+ A+ PA T P A TH+ LG + L
Sbjct: 231 SSPEGSCREVPQAASKTHGLLQAVRTQAQDKRPAVTSQPCPSAATHSLGLG----SNLSF 286
Query: 79 LSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYC---LQP---ASVLRPHIHE 132
G P N + P+ F P +T LQP A+ L P
Sbjct: 287 GPGAKRPAQAPIQACLNFPKKPRLGPFQIPESTIQGGELGAPENLQPPPAATELGPSRSP 346
Query: 133 VWSR-------------PHPRRRTPPTRACALRSHPATSRIHRGAARL 167
R PH R P +AC + HPA S H GA L
Sbjct: 347 QMGRRTPAQVPSVERQPPHRRPCLPTAQACTMSHHPAAS--HDGAQPL 392
>gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo
sapiens]
Length = 598
Score = 31.6 bits (70), Expect = 0.36
Identities = 48/169 (28%), Positives = 62/169 (36%), Gaps = 35/169 (20%)
Query: 15 CAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPEAGTHTGLLGDWRLA 74
C HPP+ +PG+R P A T+ LV + PA AG G +
Sbjct: 405 CKHPPVFQCAVNPGIRAVP--AMDTALLPPLVFFASLSPA------AGIRLG------CS 450
Query: 75 LLFILSGDHVWTLRPFLELFNQTQPPQ--FAA-----FPAPTTTRSRVRAYCLQPASVLR 127
+L DH+ RP + P F+A PA R R RA C + SV+
Sbjct: 451 PSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRERALCGRCCSVVV 510
Query: 128 PHIHEVWSRPHPRRRTPPTRACALR-------------SHPATS-RIHR 162
R R R P + ALR S PA S R+HR
Sbjct: 511 AVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHR 559
>gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo
sapiens]
Length = 616
Score = 31.6 bits (70), Expect = 0.36
Identities = 48/169 (28%), Positives = 62/169 (36%), Gaps = 35/169 (20%)
Query: 15 CAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPEAGTHTGLLGDWRLA 74
C HPP+ +PG+R P A T+ LV + PA AG G +
Sbjct: 423 CKHPPVFQCAVNPGIRAVP--AMDTALLPPLVFFASLSPA------AGIRLG------CS 468
Query: 75 LLFILSGDHVWTLRPFLELFNQTQPPQ--FAA-----FPAPTTTRSRVRAYCLQPASVLR 127
+L DH+ RP + P F+A PA R R RA C + SV+
Sbjct: 469 PSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRERALCGRCCSVVV 528
Query: 128 PHIHEVWSRPHPRRRTPPTRACALR-------------SHPATS-RIHR 162
R R R P + ALR S PA S R+HR
Sbjct: 529 AVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHR 577
>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 31.2 bits (69), Expect = 0.47
Identities = 41/130 (31%), Positives = 50/130 (38%), Gaps = 13/130 (10%)
Query: 27 PGLRPRPLSATRTSAFARLVQADARGPAPAHTPEAGTHTGLLGDWRLALLFILSGDHVWT 86
PG R P A RT + AR P+PA AG GL G W A + +
Sbjct: 52 PGNRHPPPPAARTHPGS----CRARCPSPA----AG---GLRGPWTAAPGRQRADEGAAA 100
Query: 87 LRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCLQPASVLRPHIHEVWSRPHPRRRTPPT 146
RP + + P AA PAP R +R P RP + P PP+
Sbjct: 101 ARPERQRVWARRLPGSAAAPAPG--RDALRLPPPPPPPPERPRLPPAGLAGGPADSAPPS 158
Query: 147 RACALRSHPA 156
A A RS PA
Sbjct: 159 PAPAPRSRPA 168
>gi|38569475 metaxin 1 isoform 1 [Homo sapiens]
Length = 466
Score = 30.8 bits (68), Expect = 0.62
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 3 ARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAH 57
ARGP P+ A+ A S SPG+ P PL+AT A A +G A AH
Sbjct: 90 ARGPVPRSSAASRAR----RSLASPGISPGPLTATIGGAVAG--GGPRQGRAEAH 138
>gi|38569477 metaxin 1 isoform 2 [Homo sapiens]
Length = 435
Score = 30.8 bits (68), Expect = 0.62
Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 6/55 (10%)
Query: 3 ARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAH 57
ARGP P+ A+ A S SPG+ P PL+AT A A +G A AH
Sbjct: 90 ARGPVPRSSAASRAR----RSLASPGISPGPLTATIGGAVAG--GGPRQGRAEAH 138
>gi|42658817 PREDICTED: hypothetical protein [Homo sapiens]
Length = 464
Score = 30.4 bits (67), Expect = 0.81
Identities = 45/171 (26%), Positives = 60/171 (35%), Gaps = 35/171 (20%)
Query: 23 STTSPGLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-------- 70
S+ G R P +A++T + + A+ PA T P A TH+ LG
Sbjct: 231 SSPEGGCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGA 290
Query: 71 ---WRLALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVR 116
+ + L+ L PF L QPP A P+T+ R
Sbjct: 291 KRPAQAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPSTSPQMGR 350
Query: 117 AYCLQPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
Q SV R PH R P +AC + H A S H GA L
Sbjct: 351 RTPAQVPSVER-------QPPHSRPCLPTAQACTMSHHSAAS--HDGAQPL 392
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 30.4 bits (67), Expect = 0.81
Identities = 30/113 (26%), Positives = 39/113 (34%), Gaps = 38/113 (33%)
Query: 18 PPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE-AGTHTGLLGDWRLALL 76
PPL S+ P + P P AT + GP P H P G H L
Sbjct: 1747 PPLFPSSAHPTVPPYPSQATHHTTL---------GPGPQHQPSGTGPHCPL--------- 1788
Query: 77 FILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCLQPASVLRPH 129
++G H+ QP + P PT + +C P SV PH
Sbjct: 1789 -PVTGPHL-------------QPQGPNSIPTPTAS-----GFCPHPGSVALPH 1822
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 30.4 bits (67), Expect = 0.81
Identities = 30/113 (26%), Positives = 39/113 (34%), Gaps = 38/113 (33%)
Query: 18 PPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE-AGTHTGLLGDWRLALL 76
PPL S+ P + P P AT + GP P H P G H L
Sbjct: 1747 PPLFPSSAHPTVPPYPSQATHHTTL---------GPGPQHQPSGTGPHCPL--------- 1788
Query: 77 FILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCLQPASVLRPH 129
++G H+ QP + P PT + +C P SV PH
Sbjct: 1789 -PVTGPHL-------------QPQGPNSIPTPTAS-----GFCPHPGSVALPH 1822
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.134 0.448
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,282,794
Number of Sequences: 37866
Number of extensions: 498567
Number of successful extensions: 1877
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 1810
Number of HSP's gapped (non-prelim): 148
length of query: 174
length of database: 18,247,518
effective HSP length: 95
effective length of query: 79
effective length of database: 14,650,248
effective search space: 1157369592
effective search space used: 1157369592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.