Guide to the Human Genome
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Search of human proteins with 118582286

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|118582286
6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1 [Homo sapiens]
         (471 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|118582286 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase...   960   0.0  
gi|4758902 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4...   725   0.0  
gi|4758900 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3...   669   0.0  
gi|224282149 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase...   653   0.0  
gi|64762406 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase ...   652   0.0  
gi|64762445 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase ...   651   0.0  
gi|58082089 hypothetical protein LOC161394 [Homo sapiens]              37   0.039
gi|4502211 ADP-ribosylation factor 6 [Homo sapiens]                    34   0.25 
gi|126362949 sodium channel, voltage-gated, type III, alpha isof...    33   0.56 
gi|4505753 bisphosphoglycerate mutase 1 [Homo sapiens]                 33   0.73 
gi|223005897 GPN-loop GTPase 1 isoform a [Homo sapiens]                32   1.2  
gi|20270317 mitochondrial ribosome recycling factor isoform 1 [H...    32   1.2  
gi|23503297 protease, serine, 35 [Homo sapiens]                        32   1.2  
gi|66879664 ADP-ribosylation factor 1 [Homo sapiens]                   31   2.1  
gi|66879662 ADP-ribosylation factor 1 [Homo sapiens]                   31   2.1  
gi|66879660 ADP-ribosylation factor 1 [Homo sapiens]                   31   2.1  
gi|4502201 ADP-ribosylation factor 1 [Homo sapiens]                    31   2.1  
gi|50593010 bisphosphoglycerate mutase 2 [Homo sapiens]                31   2.8  
gi|4502203 ADP-ribosylation factor 3 [Homo sapiens]                    31   2.8  
gi|4502209 ADP-ribosylation factor 5 [Homo sapiens]                    30   3.6  
gi|169168318 PREDICTED: similar to hCG1644658 [Homo sapiens]           30   6.2  
gi|169168021 PREDICTED: similar to hCG1644658 [Homo sapiens]           30   6.2  
gi|239742642 PREDICTED: hypothetical protein XP_002342587 [Homo ...    30   6.2  
gi|94721261 2',3'-cyclic nucleotide 3' phosphodiesterase [Homo s...    29   8.1  
gi|34577114 cytomatrix protein p110 [Homo sapiens]                     29   8.1  

>gi|118582286 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 1
           [Homo sapiens]
          Length = 471

 Score =  960 bits (2481), Expect = 0.0
 Identities = 471/471 (100%), Positives = 471/471 (100%)

Query: 1   MSPEMGELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYIST 60
           MSPEMGELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYIST
Sbjct: 1   MSPEMGELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYIST 60

Query: 61  KLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQIRKQCALAALKDVHNYL 120
           KLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQIRKQCALAALKDVHNYL
Sbjct: 61  KLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQIRKQCALAALKDVHNYL 120

Query: 121 SHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPD 180
           SHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPD
Sbjct: 121 SHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPD 180

Query: 181 YIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHIQSRT 240
           YIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHIQSRT
Sbjct: 181 YIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHIQSRT 240

Query: 241 VYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLK 300
           VYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLK
Sbjct: 241 VYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLK 300

Query: 301 VWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY 360
           VWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY
Sbjct: 301 VWTSHMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRY 360

Query: 361 RYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLH 420
           RYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLH
Sbjct: 361 RYPKGESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLH 420

Query: 421 TVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITREPEEALDTVPAHY 471
           TVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITREPEEALDTVPAHY
Sbjct: 421 TVLKLTPVAYGCKVESIYLNVEAVNTHREKPENVDITREPEEALDTVPAHY 471


>gi|4758902 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
           [Homo sapiens]
          Length = 469

 Score =  725 bits (1871), Expect = 0.0
 Identities = 353/466 (75%), Positives = 404/466 (86%), Gaps = 5/466 (1%)

Query: 7   ELTQTRLQKIWIPHSSGSSRLQR-RRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRY 65
           ELTQ  L+KIW+P+S+G   L   +RG  +   TN PT+++MVGLPARGKTYIS KLTRY
Sbjct: 6   ELTQNPLKKIWMPYSNGRPALHACQRGVCM---TNCPTLIVMVGLPARGKTYISKKLTRY 62

Query: 66  LNWIGTPTKVFNLGQYRREAV-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEE 124
           LNWIG PT+ FN+GQYRR+ V +YK++EFFLPDN E L+IRKQCALAAL+DV  +LS E 
Sbjct: 63  LNWIGVPTREFNVGQYRRDVVKTYKSFEFFLPDNEEGLKIRKQCALAALRDVRRFLSEEG 122

Query: 125 GHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDC 184
           GHVAVFDATNTTRERR+ I  F +++GYK FF+ESIC DP +IA NI QVKLGSPDY++ 
Sbjct: 123 GHVAVFDATNTTRERRATIFNFGEQNGYKTFFVESICVDPEVIAANIVQVKLGSPDYVNR 182

Query: 185 DREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244
           D ++  EDF++RIECYE +Y+ LDE+LD  LSYIKI DVG  Y+VNRV DHIQSR VYYL
Sbjct: 183 DSDEATEDFMRRIECYENSYESLDEDLDRDLSYIKIMDVGQSYVVNRVADHIQSRIVYYL 242

Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304
           MNIHVTPRSIYLCRHGESELN++GRIGGD GLS RG+++A +LA FI  Q I  LKVWTS
Sbjct: 243 MNIHVTPRSIYLCRHGESELNLKGRIGGDPGLSPRGREFAKSLAQFISDQNIKDLKVWTS 302

Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364
            MKRTIQTAEALGVPYEQWK LNEIDAGVCEEMTYEEIQ++YP EFALRDQDKYRYRYPK
Sbjct: 303 QMKRTIQTAEALGVPYEQWKVLNEIDAGVCEEMTYEEIQDNYPLEFALRDQDKYRYRYPK 362

Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424
           GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDK++++LPYLKCPLHTVLK
Sbjct: 363 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKAAEQLPYLKCPLHTVLK 422

Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPENVDITREPEEALDTVPAH 470
           LTPVAYGCKVESI+LNV AVNTHR++P+NVDI+R PEEAL TVPAH
Sbjct: 423 LTPVAYGCKVESIFLNVAAVNTHRDRPQNVDISRPPEEALVTVPAH 468


>gi|4758900 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
           isoform 1 [Homo sapiens]
          Length = 520

 Score =  669 bits (1726), Expect = 0.0
 Identities = 321/449 (71%), Positives = 385/449 (85%), Gaps = 6/449 (1%)

Query: 7   ELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYL 66
           ELTQ+R+QKIW+P     S L R  G   P+ TNSPT+++MVGLPARGKTYIS KLTRYL
Sbjct: 4   ELTQSRVQKIWVPVDHRPS-LPRSCG---PKLTNSPTVIVMVGLPARGKTYISKKLTRYL 59

Query: 67  NWIGTPTKVFNLGQYRREAVS-YKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEG 125
           NWIG PTKVFN+G+YRREAV  Y +Y FF PDN EA+++RKQCALAAL+DV +YL+ E G
Sbjct: 60  NWIGVPTKVFNVGEYRREAVKQYSSYNFFRPDNEEAMKVRKQCALAALRDVKSYLAKEGG 119

Query: 126 HVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCD 185
            +AVFDATNTTRERR +IL FAKE+ +K FFIES+C+DP ++A NI +VK+ SPDY DC+
Sbjct: 120 QIAVFDATNTTRERRHMILHFAKENDFKAFFIESVCDDPTVVASNIMEVKISSPDYKDCN 179

Query: 186 REKVLEDFLKRIECYEVNYQPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYL 244
             + ++DF+KRI CYE +YQPLD ++ D  LS IK+ DVG R++VNRVQDHIQSR VYYL
Sbjct: 180 SAEAMDDFMKRISCYEASYQPLDPDKCDRDLSLIKVIDVGRRFLVNRVQDHIQSRIVYYL 239

Query: 245 MNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTS 304
           MNIHV PR+IYLCRHGE+E N++GRIGGDSGLS RGK++A AL+ F++ Q +  L+VWTS
Sbjct: 240 MNIHVQPRTIYLCRHGENEHNLQGRIGGDSGLSSRGKKFASALSKFVEEQNLKDLRVWTS 299

Query: 305 HMKRTIQTAEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPK 364
            +K TIQTAEAL +PYEQWKALNEIDAGVCEE+TYEEI++ YPEE+ALR+QDKY YRYP 
Sbjct: 300 QLKSTIQTAEALRLPYEQWKALNEIDAGVCEELTYEEIRDTYPEEYALREQDKYYYRYPT 359

Query: 365 GESYEDLVQRLEPVIMELERQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLK 424
           GESY+DLVQRLEPVIMELERQENVLVICHQAV+RCLLAYFLDKS++E+PYLKCPLHTVLK
Sbjct: 360 GESYQDLVQRLEPVIMELERQENVLVICHQAVLRCLLAYFLDKSAEEMPYLKCPLHTVLK 419

Query: 425 LTPVAYGCKVESIYLNVEAVNTHREKPEN 453
           LTPVAYGC+VESIYLNVE+V THRE+ E+
Sbjct: 420 LTPVAYGCRVESIYLNVESVCTHRERSED 448


>gi|224282149 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
           isoform 2 [Homo sapiens]
          Length = 500

 Score =  653 bits (1684), Expect = 0.0
 Identities = 307/420 (73%), Positives = 368/420 (87%), Gaps = 2/420 (0%)

Query: 36  PQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVS-YKNYEFF 94
           P+ TNSPT+++MVGLPARGKTYIS KLTRYLNWIG PTKVFN+G+YRREAV  Y +Y FF
Sbjct: 9   PKLTNSPTVIVMVGLPARGKTYISKKLTRYLNWIGVPTKVFNVGEYRREAVKQYSSYNFF 68

Query: 95  LPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKV 154
            PDN EA+++RKQCALAAL+DV +YL+ E G +AVFDATNTTRERR +IL FAKE+ +K 
Sbjct: 69  RPDNEEAMKVRKQCALAALRDVKSYLAKEGGQIAVFDATNTTRERRHMILHFAKENDFKA 128

Query: 155 FFIESICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLD-EELDS 213
           FFIES+C+DP ++A NI +VK+ SPDY DC+  + ++DF+KRI CYE +YQPLD ++ D 
Sbjct: 129 FFIESVCDDPTVVASNIMEVKISSPDYKDCNSAEAMDDFMKRISCYEASYQPLDPDKCDR 188

Query: 214 HLSYIKIFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGD 273
            LS IK+ DVG R++VNRVQDHIQSR VYYLMNIHV PR+IYLCRHGE+E N++GRIGGD
Sbjct: 189 DLSLIKVIDVGRRFLVNRVQDHIQSRIVYYLMNIHVQPRTIYLCRHGENEHNLQGRIGGD 248

Query: 274 SGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQWKALNEIDAGV 333
           SGLS RGK++A AL+ F++ Q +  L+VWTS +K TIQTAEAL +PYEQWKALNEIDAGV
Sbjct: 249 SGLSSRGKKFASALSKFVEEQNLKDLRVWTSQLKSTIQTAEALRLPYEQWKALNEIDAGV 308

Query: 334 CEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELERQENVLVICH 393
           CEE+TYEEI++ YPEE+ALR+QDKY YRYP GESY+DLVQRLEPVIMELERQENVLVICH
Sbjct: 309 CEELTYEEIRDTYPEEYALREQDKYYYRYPTGESYQDLVQRLEPVIMELERQENVLVICH 368

Query: 394 QAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEAVNTHREKPEN 453
           QAV+RCLLAYFLDKS++E+PYLKCPLHTVLKLTPVAYGC+VESIYLNVE+V THRE+ E+
Sbjct: 369 QAVLRCLLAYFLDKSAEEMPYLKCPLHTVLKLTPVAYGCRVESIYLNVESVCTHRERSED 428


>gi|64762406 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
           isoform a [Homo sapiens]
          Length = 505

 Score =  652 bits (1681), Expect = 0.0
 Identities = 312/430 (72%), Positives = 369/430 (85%), Gaps = 2/430 (0%)

Query: 26  RLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREA 85
           R+  ++ S     TNSPT+++M+GLPARGKTY+S KLTRYLNWIG PTKVFNLG YRREA
Sbjct: 22  RMSEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREA 81

Query: 86  V-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLIL 144
           V SYK+Y+FF  DN EA++IRKQCAL AL+DV  YL+ E G +AVFDATNTTRERR +IL
Sbjct: 82  VKSYKSYDFFRHDNEEAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMIL 141

Query: 145 QFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNY 204
            FA+++ +KVFF+ES+C+DP +IA NI +VK+ SPDY + +RE V+EDFLKRIECY+V Y
Sbjct: 142 NFAEQNSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMEDFLKRIECYKVTY 201

Query: 205 QPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESE 263
           +PLD +  D  LS+IK+ +VG R++VNRVQD+IQS+ VYYLMNIHV PR+IYLCRHGESE
Sbjct: 202 RPLDPDNYDKDLSFIKVINVGQRFLVNRVQDYIQSKIVYYLMNIHVQPRTIYLCRHGESE 261

Query: 264 LNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQW 323
            N+ G+IGGDSGLSVRGKQ+A AL  F++ Q I+ LKVWTS +KRTIQTAE+LGVPYEQW
Sbjct: 262 FNLLGKIGGDSGLSVRGKQFAQALRKFLEEQEITDLKVWTSQLKRTIQTAESLGVPYEQW 321

Query: 324 KALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELE 383
           K LNEIDAGVCEEMTY EI++ YPEEFALRDQ+KY YRYP GESY+DLVQRLEPVIMELE
Sbjct: 322 KILNEIDAGVCEEMTYAEIEKRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELE 381

Query: 384 RQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEA 443
           RQ NVLVI HQAVMRCLLAYFLDK +DELPYL+CPLHT+ KLTPVAYGCKVE+I LNVEA
Sbjct: 382 RQGNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKLNVEA 441

Query: 444 VNTHREKPEN 453
           VNTHR+KP N
Sbjct: 442 VNTHRDKPTN 451


>gi|64762445 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 2
           isoform b [Homo sapiens]
          Length = 471

 Score =  651 bits (1680), Expect = 0.0
 Identities = 316/449 (70%), Positives = 375/449 (83%), Gaps = 6/449 (1%)

Query: 26  RLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREA 85
           R+  ++ S     TNSPT+++M+GLPARGKTY+S KLTRYLNWIG PTKVFNLG YRREA
Sbjct: 22  RMSEKKCSWASYMTNSPTLIVMIGLPARGKTYVSKKLTRYLNWIGVPTKVFNLGVYRREA 81

Query: 86  V-SYKNYEFFLPDNMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRSLIL 144
           V SYK+Y+FF  DN EA++IRKQCAL AL+DV  YL+ E G +AVFDATNTTRERR +IL
Sbjct: 82  VKSYKSYDFFRHDNEEAMKIRKQCALVALEDVKAYLTEENGQIAVFDATNTTRERRDMIL 141

Query: 145 QFAKEHGYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNY 204
            FA+++ +KVFF+ES+C+DP +IA NI +VK+ SPDY + +RE V+EDFLKRIECY+V Y
Sbjct: 142 NFAEQNSFKVFFVESVCDDPDVIAANILEVKVSSPDYPERNRENVMEDFLKRIECYKVTY 201

Query: 205 QPLD-EELDSHLSYIKIFDVGTRYMVNRVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESE 263
           +PLD +  D  LS+IK+ +VG R++VNRVQD+IQS+ VYYLMNIHV PR+IYLCRHGESE
Sbjct: 202 RPLDPDNYDKDLSFIKVINVGQRFLVNRVQDYIQSKIVYYLMNIHVQPRTIYLCRHGESE 261

Query: 264 LNIRGRIGGDSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQTAEALGVPYEQW 323
            N+ G+IGGDSGLSVRGKQ+A AL  F++ Q I+ LKVWTS +KRTIQTAE+LGVPYEQW
Sbjct: 262 FNLLGKIGGDSGLSVRGKQFAQALRKFLEEQEITDLKVWTSQLKRTIQTAESLGVPYEQW 321

Query: 324 KALNEIDAGVCEEMTYEEIQEHYPEEFALRDQDKYRYRYPKGESYEDLVQRLEPVIMELE 383
           K LNEIDAGVCEEMTY EI++ YPEEFALRDQ+KY YRYP GESY+DLVQRLEPVIMELE
Sbjct: 322 KILNEIDAGVCEEMTYAEIEKRYPEEFALRDQEKYLYRYPGGESYQDLVQRLEPVIMELE 381

Query: 384 RQENVLVICHQAVMRCLLAYFLDKSSDELPYLKCPLHTVLKLTPVAYGCKVESIYLNVEA 443
           RQ NVLVI HQAVMRCLLAYFLDK +DELPYL+CPLHT+ KLTPVAYGCKVE+I LNVEA
Sbjct: 382 RQGNVLVISHQAVMRCLLAYFLDKGADELPYLRCPLHTIFKLTPVAYGCKVETIKLNVEA 441

Query: 444 VNTHREKPENVDIT----REPEEALDTVP 468
           VNTHR+KP   + T    R P  A   +P
Sbjct: 442 VNTHRDKPTAAETTLAVRRRPSAASLMLP 470


>gi|58082089 hypothetical protein LOC161394 [Homo sapiens]
          Length = 674

 Score = 37.0 bits (84), Expect = 0.039
 Identities = 36/134 (26%), Positives = 56/134 (41%), Gaps = 12/134 (8%)

Query: 51  PARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQIRKQCAL 110
           P RGK  +S K  +         + + LG  R    S   +  FL    + L + ++C+ 
Sbjct: 444 PKRGKLSLSDKFRK---------EYYALGSLRESEESIGTHYEFLQPLQKLLNVSEECSY 494

Query: 111 AALKDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICNDPGIIAEN 170
           +   +    LS       V D +   +ER S   +   E G ++ F E +  DP  +AE 
Sbjct: 495 SDPSESQTELSEFVHEKEVVDLSQELKERVSEDDETQPEKGTELQF-EHLNWDPEEVAEW 553

Query: 171 IRQVKLGSPDYIDC 184
           I Q  LG P Y +C
Sbjct: 554 ISQ--LGFPQYKEC 565


>gi|4502211 ADP-ribosylation factor 6 [Homo sapiens]
          Length = 175

 Score = 34.3 bits (77), Expect = 0.25
 Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 5/56 (8%)

Query: 38 FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEF 93
          F N    ++M+GL A GKT I  KL    +    PT  FN+     E V+YKN +F
Sbjct: 9  FGNKEMRILMLGLDAAGKTTILYKLKLGQSVTTIPTVGFNV-----ETVTYKNVKF 59


>gi|126362949 sodium channel, voltage-gated, type III, alpha isoform
           1 [Homo sapiens]
          Length = 2000

 Score = 33.1 bits (74), Expect = 0.56
 Identities = 20/67 (29%), Positives = 35/67 (52%), Gaps = 7/67 (10%)

Query: 7   ELTQTRLQKIWIPHSSGSSRLQRRRGSSIPQFTNSPTMVIMVGLPARGKTYISTKLTRYL 66
           E +++R   +++PH  G      RR S++ Q + S  MV   GLPA GK + +      +
Sbjct: 602 EDSESRRDSLFVPHRHGE-----RRNSNVSQASMSSRMV--PGLPANGKMHSTVDCNGVV 654

Query: 67  NWIGTPT 73
           + +G P+
Sbjct: 655 SLVGGPS 661


>gi|4505753 bisphosphoglycerate mutase 1 [Homo sapiens]
          Length = 254

 Score = 32.7 bits (73), Expect = 0.73
 Identities = 25/79 (31%), Positives = 34/79 (43%), Gaps = 11/79 (13%)

Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
           + L RHGES  N+  R  G  D+ LS  G + A      ++  G      +TS  KR I+
Sbjct: 6   LVLIRHGESAWNLENRFSGWYDADLSPAGHEEAKRGGQALRDAGYEFDICFTSVQKRAIR 65

Query: 312 TAEALGVPYEQWKALNEID 330
           T          W  L+ ID
Sbjct: 66  TL---------WTVLDAID 75


>gi|223005897 GPN-loop GTPase 1 isoform a [Homo sapiens]
          Length = 388

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)

Query: 42  PTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEA 101
           P  ++++G+   GKT    +LT +L+  GTP  V NL     E     N +  + D ++ 
Sbjct: 33  PVCLLVLGMAGSGKTTFVQRLTGHLHAQGTPPYVINLDPAVHEVPFPANID--IRDTVKY 90

Query: 102 LQIRKQCAL 110
            ++ KQ  L
Sbjct: 91  KEVMKQYGL 99


>gi|20270317 mitochondrial ribosome recycling factor isoform 1 [Homo
           sapiens]
          Length = 262

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 20/116 (17%)

Query: 107 QCALAALKDVH----NYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIESICN 162
           +C  AA+K +     N     EG +        TRE R ++++ AK++  K         
Sbjct: 153 ECTAAAIKAIRESGMNLNPEVEGTLIRVPIPQVTREHREMLVKLAKQNTNKA-------- 204

Query: 163 DPGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLD--EELDSHLS 216
                 +++R+V+  S + +   ++ V ED ++ IE  +++    D   ELD HL+
Sbjct: 205 -----KDSLRKVRTNSMNKLKKSKDTVSEDTIRLIE-KQISQMADDTVAELDRHLA 254


>gi|23503297 protease, serine, 35 [Homo sapiens]
          Length = 413

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 37/128 (28%), Positives = 61/128 (47%), Gaps = 21/128 (16%)

Query: 164 PGIIAENIRQVKLGSPDYIDCDREKVLEDFLKRIECYEVNYQPLDEELDSHLSYIKIFDV 223
           P I++E  R   L SP + + D  K++ + +  IEC +    P   EL+ +LSY  +F+ 
Sbjct: 35  PRIVSE--RTFHLTSPAF-EADA-KMMVNTVCGIECQKELPTPSLSELEDYLSYETVFEN 90

Query: 224 GTRYMVN-RVQDHIQSRTVYYLMNIHVTPRSIYLCRHGESELNIRGRIGGDSGLSVRGKQ 282
           GTR +   +VQD +   T       ++T + + + R        R   G DS  S+  K+
Sbjct: 91  GTRTLTRVKVQDLVLEPTQ------NITTKGVSVRRK-------RQVYGTDSRFSILDKR 137

Query: 283 YAYALANF 290
           +   L NF
Sbjct: 138 F---LTNF 142


>gi|66879664 ADP-ribosylation factor 1 [Homo sapiens]
          Length = 181

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 15/114 (13%)

Query: 38  FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
           F      ++MVGL A GKT I  KL         PT  FN+     E V YKN  F + D
Sbjct: 13  FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWD 67

Query: 98  NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKE 149
                +IR            +Y  + +G + V D+ +  R  E R  +++   E
Sbjct: 68  VGGQDKIRPLW--------RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAE 113


>gi|66879662 ADP-ribosylation factor 1 [Homo sapiens]
          Length = 181

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 15/114 (13%)

Query: 38  FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
           F      ++MVGL A GKT I  KL         PT  FN+     E V YKN  F + D
Sbjct: 13  FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWD 67

Query: 98  NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKE 149
                +IR            +Y  + +G + V D+ +  R  E R  +++   E
Sbjct: 68  VGGQDKIRPLW--------RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAE 113


>gi|66879660 ADP-ribosylation factor 1 [Homo sapiens]
          Length = 181

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 15/114 (13%)

Query: 38  FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
           F      ++MVGL A GKT I  KL         PT  FN+     E V YKN  F + D
Sbjct: 13  FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWD 67

Query: 98  NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKE 149
                +IR            +Y  + +G + V D+ +  R  E R  +++   E
Sbjct: 68  VGGQDKIRPLW--------RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAE 113


>gi|4502201 ADP-ribosylation factor 1 [Homo sapiens]
          Length = 181

 Score = 31.2 bits (69), Expect = 2.1
 Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 15/114 (13%)

Query: 38  FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
           F      ++MVGL A GKT I  KL         PT  FN+     E V YKN  F + D
Sbjct: 13  FGKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWD 67

Query: 98  NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKE 149
                +IR            +Y  + +G + V D+ +  R  E R  +++   E
Sbjct: 68  VGGQDKIRPLW--------RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAE 113


>gi|50593010 bisphosphoglycerate mutase 2 [Homo sapiens]
          Length = 253

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 47/206 (22%), Positives = 80/206 (38%), Gaps = 41/206 (19%)

Query: 254 IYLCRHGESELNIRGRIGG--DSGLSVRGKQYAYALANFIQSQGISSLKVWTSHMKRTIQ 311
           + + RHGES  N   R  G  D+ LS +G + A   A  I+   +     +TS +KR I+
Sbjct: 6   LVMVRHGESTWNQENRFCGWFDAELSEKGTEEAKRGAKAIKDAKMEFDICYTSVLKRAIR 65

Query: 312 T-------AEALGVPYEQWKALNEIDAGVCEEMTYEEIQEHYPEE--------FALRD-- 354
           T        + + +P  +   LNE   G    +   E    + EE        F +    
Sbjct: 66  TLWAILDGTDQMWLPVVRTWRLNERHYGGLTGLNKAETAAKHGEEQVKIWRRSFDIPPPP 125

Query: 355 -QDKYRY--------RY--------PKGESYEDLVQRL-----EPVIMELERQENVLVIC 392
             +K+ Y        RY        P  ES +D + R      E ++ +++  + VL+  
Sbjct: 126 MDEKHPYYNSISKERRYAGLKPGELPTCESLKDTIARALPFWNEEIVPQIKAGKRVLIAA 185

Query: 393 HQAVMRCLLAYFLDKSSDELPYLKCP 418
           H   +R ++ +    S   +  L  P
Sbjct: 186 HGNSLRGIVKHLEGMSDQAIMELNLP 211


>gi|4502203 ADP-ribosylation factor 3 [Homo sapiens]
          Length = 181

 Score = 30.8 bits (68), Expect = 2.8
 Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 15/107 (14%)

Query: 45  VIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPDNMEALQI 104
           ++MVGL A GKT I  KL         PT  FN+     E V YKN  F + D     +I
Sbjct: 20  ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNISFTVWDVGGQDKI 74

Query: 105 RKQCALAALKDVHNYLSHEEGHVAVFDATNTTR--ERRSLILQFAKE 149
           R            +Y  + +G + V D+ +  R  E R  +++   E
Sbjct: 75  RPLW--------RHYFQNTQGLIFVVDSNDRERVNEAREELMRMLAE 113


>gi|4502209 ADP-ribosylation factor 5 [Homo sapiens]
          Length = 180

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 31/104 (29%), Positives = 43/104 (41%), Gaps = 13/104 (12%)

Query: 38  FTNSPTMVIMVGLPARGKTYISTKLTRYLNWIGTPTKVFNLGQYRREAVSYKNYEFFLPD 97
           F      ++MVGL A GKT I  KL         PT  FN+     E V YKN  F + D
Sbjct: 13  FGKKQMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNV-----ETVEYKNICFTVWD 67

Query: 98  NMEALQIRKQCALAALKDVHNYLSHEEGHVAVFDATNTTRERRS 141
                +IR            +Y  + +G + V D+ +  R + S
Sbjct: 68  VGGQDKIRPLW--------RHYFQNTQGLIFVVDSNDRERVQES 103


>gi|169168318 PREDICTED: similar to hCG1644658 [Homo sapiens]
          Length = 59

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 12/35 (34%), Positives = 24/35 (68%)

Query: 157 IESICNDPGIIAENIRQVKLGSPDYIDCDREKVLE 191
           I++IC + G++A   R++K+ + DYID  + ++ E
Sbjct: 24  IKAICTEAGLMALRERRMKVTNEDYIDFSKIEIRE 58


>gi|169168021 PREDICTED: similar to hCG1644658 [Homo sapiens]
          Length = 59

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 12/35 (34%), Positives = 24/35 (68%)

Query: 157 IESICNDPGIIAENIRQVKLGSPDYIDCDREKVLE 191
           I++IC + G++A   R++K+ + DYID  + ++ E
Sbjct: 24  IKAICTEAGLMALRERRMKVTNEDYIDFSKIEIRE 58


>gi|239742642 PREDICTED: hypothetical protein XP_002342587 [Homo
           sapiens]
          Length = 59

 Score = 29.6 bits (65), Expect = 6.2
 Identities = 12/35 (34%), Positives = 24/35 (68%)

Query: 157 IESICNDPGIIAENIRQVKLGSPDYIDCDREKVLE 191
           I++IC + G++A   R++K+ + DYID  + ++ E
Sbjct: 24  IKAICTEAGLMALRERRMKVTNEDYIDFSKIEIRE 58


>gi|94721261 2',3'-cyclic nucleotide 3' phosphodiesterase [Homo
           sapiens]
          Length = 421

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 13/45 (28%), Positives = 23/45 (51%)

Query: 114 KDVHNYLSHEEGHVAVFDATNTTRERRSLILQFAKEHGYKVFFIE 158
           +D+  Y    +  + V D TN  RER   + + A ++ Y+V  +E
Sbjct: 105 EDLAAYCRRRDIRILVLDDTNHERERLEQLFEMADQYQYQVVLVE 149


>gi|34577114 cytomatrix protein p110 [Homo sapiens]
          Length = 957

 Score = 29.3 bits (64), Expect = 8.1
 Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 24/151 (15%)

Query: 88  YKNYEFFLPDNMEALQ---IRKQCALAALKDVHNYLSHEEG----HVAVFDATNTTRERR 140
           YK++  F+   ++ L+    +K+  L AL+     LS++      H+ V   + T +E+R
Sbjct: 425 YKSHSKFMKTKIDQLKQELSKKESELLALQTKLETLSNQNSDCKQHIEVLKESLTAKEQR 484

Query: 141 SLILQFAKEH------------GYKVFFIESICNDPGIIAENIRQVKLGSPDYIDCDREK 188
           + ILQ   +               K   ++ +  + G +A  IR +K    D ++  +E+
Sbjct: 485 AAILQTEVDALRLRLEEKESFLNKKTKQLQDLTEEKGTLAGEIRDMK----DMLEV-KER 539

Query: 189 VLEDFLKRIECYEVNYQPLDEELDSHLSYIK 219
            +    K+IE  +   +  D++L +    +K
Sbjct: 540 KINVLQKKIENLQEQLRDKDKQLTNLKDRVK 570


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.136    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,775,890
Number of Sequences: 37866
Number of extensions: 775892
Number of successful extensions: 1877
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 1855
Number of HSP's gapped (non-prelim): 25
length of query: 471
length of database: 18,247,518
effective HSP length: 106
effective length of query: 365
effective length of database: 14,233,722
effective search space: 5195308530
effective search space used: 5195308530
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 64 (29.3 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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