Guide to the Human Genome
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Search of human proteins with 239751734

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751734 PREDICTED: similar to TRIM5/CypA fusion protein
[Homo sapiens]
         (156 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757228 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   334   2e-92
gi|239751734 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   334   2e-92
gi|239746235 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   334   2e-92
gi|10863927 peptidylprolyl isomerase A [Homo sapiens]                 273   3e-74
gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]   270   5e-73
gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]    270   5e-73
gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A iso...   270   5e-73
gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens]             251   2e-67
gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens]              251   2e-67
gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens]              251   2e-67
gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G ...   249   9e-67
gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B ...   248   1e-66
gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens]         248   1e-66
gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C ...   248   1e-66
gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   248   1e-66
gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E ...   246   7e-66
gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   246   7e-66
gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   246   7e-66
gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   243   5e-65
gi|239751853 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   243   5e-65
gi|113428306 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   243   5e-65
gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens]             242   8e-65
gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]             242   8e-65
gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens]             242   8e-65
gi|239756631 PREDICTED: similar to TRIMCyp [Homo sapiens]             225   1e-59
gi|239751117 PREDICTED: similar to TRIMCyp [Homo sapiens]             225   1e-59
gi|239755072 PREDICTED: similar to TRIMCyp [Homo sapiens]             220   3e-58
gi|239749598 PREDICTED: similar to TRIMCyp [Homo sapiens]             220   3e-58
gi|239743865 PREDICTED: similar to TRIMCyp [Homo sapiens]             220   3e-58
gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]        217   3e-57

>gi|239757228 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  334 bits (856), Expect = 2e-92
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MVNPTKFFNEPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGG 60
           MVNPTKFFNEPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGG
Sbjct: 1   MVNPTKFFNEPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGG 60

Query: 61  DFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGE 120
           DFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGE
Sbjct: 61  DFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGE 120

Query: 121 HVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           HVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC
Sbjct: 121 HVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156


>gi|239751734 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  334 bits (856), Expect = 2e-92
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MVNPTKFFNEPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGG 60
           MVNPTKFFNEPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGG
Sbjct: 1   MVNPTKFFNEPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGG 60

Query: 61  DFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGE 120
           DFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGE
Sbjct: 61  DFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGE 120

Query: 121 HVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           HVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC
Sbjct: 121 HVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156


>gi|239746235 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  334 bits (856), Expect = 2e-92
 Identities = 156/156 (100%), Positives = 156/156 (100%)

Query: 1   MVNPTKFFNEPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGG 60
           MVNPTKFFNEPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGG
Sbjct: 1   MVNPTKFFNEPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGG 60

Query: 61  DFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGE 120
           DFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGE
Sbjct: 61  DFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGE 120

Query: 121 HVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           HVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC
Sbjct: 121 HVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156


>gi|10863927 peptidylprolyl isomerase A [Homo sapiens]
          Length = 165

 Score =  273 bits (699), Expect = 3e-74
 Identities = 132/161 (81%), Positives = 140/161 (86%), Gaps = 5/161 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVNPT FF+     EP GR+S +LFADK PKTAEN  ALS GEKGFGYKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC GGDFT HNG+GGK IYGEKF+DENFILK TG GILS  NAGPNTNGSQFFIC+AK+E
Sbjct: 61  MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           WLDG+HV FGKVKEGMNIVEAME FGSRNGKTSKKITIADC
Sbjct: 121 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADC 161


>gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]
          Length = 165

 Score =  270 bits (689), Expect = 5e-73
 Identities = 129/160 (80%), Positives = 137/160 (85%), Gaps = 5/160 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVNPT FF+     E  GRIS +LFADKFPKTAEN CAL+ GEKGFGYKG CFHRIIPGF
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MCHGGDFTHHNG+GGK IYGEK DD+NFILK TG GILS  NAGPNTNGSQFFIC+AKSE
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIAD 155
           WLD +HV  GKVKEGMNIVEAME FGSRNGKTSKK+TI D
Sbjct: 121 WLDSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPD 160


>gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]
          Length = 165

 Score =  270 bits (689), Expect = 5e-73
 Identities = 129/160 (80%), Positives = 137/160 (85%), Gaps = 5/160 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVNPT FF+     E  GRIS +LFADKFPKTAEN CAL+ GEKGFGYKG CFHRIIPGF
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MCHGGDFTHHNG+GGK IYGEK DD+NFILK TG GILS  NAGPNTNGSQFFIC+AKSE
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIAD 155
           WLD +HV  GKVKEGMNIVEAME FGSRNGKTSKK+TI D
Sbjct: 121 WLDSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPD 160


>gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A
           isoform 2 [Homo sapiens]
          Length = 165

 Score =  270 bits (689), Expect = 5e-73
 Identities = 129/160 (80%), Positives = 137/160 (85%), Gaps = 5/160 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVNPT FF+     E  GRIS +LFADKFPKTAEN CAL+ GEKGFGYKG CFHRIIPGF
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MCHGGDFTHHNG+GGK IYGEK DD+NFILK TG GILS  NAGPNTNGSQFFIC+AKSE
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIAD 155
           WLD +HV  GKVKEGMNIVEAME FGSRNGKTSKK+TI D
Sbjct: 121 WLDSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPD 160


>gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  251 bits (640), Expect = 2e-67
 Identities = 122/158 (77%), Positives = 129/158 (81%), Gaps = 5/158 (3%)

Query: 4   PTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCH 58
           PT FF+     +P G +S +LFADKFPKTAEN  ALS GEKGFGYK SCFHRIIPGFMC 
Sbjct: 7   PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQ 66

Query: 59  GGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLD 118
           GGDFTHHNG+G K IYGEKFDDENFILK TG GI S  NAGPNTNGSQF  C+AK+ WLD
Sbjct: 67  GGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLD 126

Query: 119 GEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           G HV  GKVKEGMNI EAME FGSRNGKTSKKITIADC
Sbjct: 127 GMHVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADC 164


>gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  251 bits (640), Expect = 2e-67
 Identities = 122/158 (77%), Positives = 129/158 (81%), Gaps = 5/158 (3%)

Query: 4   PTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCH 58
           PT FF+     +P G +S +LFADKFPKTAEN  ALS GEKGFGYK SCFHRIIPGFMC 
Sbjct: 7   PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQ 66

Query: 59  GGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLD 118
           GGDFTHHNG+G K IYGEKFDDENFILK TG GI S  NAGPNTNGSQF  C+AK+ WLD
Sbjct: 67  GGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLD 126

Query: 119 GEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           G HV  GKVKEGMNI EAME FGSRNGKTSKKITIADC
Sbjct: 127 GMHVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADC 164


>gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  251 bits (640), Expect = 2e-67
 Identities = 122/158 (77%), Positives = 129/158 (81%), Gaps = 5/158 (3%)

Query: 4   PTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCH 58
           PT FF+     +P G +S +LFADKFPKTAEN  ALS GEKGFGYK SCFHRIIPGFMC 
Sbjct: 7   PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQ 66

Query: 59  GGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLD 118
           GGDFTHHNG+G K IYGEKFDDENFILK TG GI S  NAGPNTNGSQF  C+AK+ WLD
Sbjct: 67  GGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLD 126

Query: 119 GEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           G HV  GKVKEGMNI EAME FGSRNGKTSKKITIADC
Sbjct: 127 GMHVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADC 164


>gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G
           [Homo sapiens]
          Length = 164

 Score =  249 bits (635), Expect = 9e-67
 Identities = 124/161 (77%), Positives = 132/161 (81%), Gaps = 5/161 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVN   FF+     +P GRISI+ FADK PKTAEN  ALS GEKGF YKGSCFHRIIPGF
Sbjct: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC GGDFTH NG+G K IYGEKFDDEN I K TGSGILS  NAGPNTNGSQFFIC+AK+E
Sbjct: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           WLDG+HV FGKVKE +NIVEAME FG RN KTSKKITIADC
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADC 161


>gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B
           [Homo sapiens]
          Length = 164

 Score =  248 bits (634), Expect = 1e-66
 Identities = 124/161 (77%), Positives = 132/161 (81%), Gaps = 5/161 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVN   FF+     +P GRISI+LFADK  KTAEN  ALS GEKGF YKGSCFHRIIPGF
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC GGDFT HNG+G K IYGEKFDDEN I K TGSGILS  NAGPNTNGSQFFIC+AK+E
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           WLDG+HV FGKVKE +NIVEAME FG RN KTSKKITIADC
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADC 161


>gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens]
          Length = 164

 Score =  248 bits (634), Expect = 1e-66
 Identities = 124/161 (77%), Positives = 132/161 (81%), Gaps = 5/161 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVN   FF+     +P GRISI+LFADK  KTAEN  ALS GEKGF YKGSCFHRIIPGF
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC GGDFT HNG+G K IYGEKFDDEN I K TGSGILS  NAGPNTNGSQFFIC+AK+E
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           WLDG+HV FGKVKE +NIVEAME FG RN KTSKKITIADC
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADC 161


>gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C
           [Homo sapiens]
          Length = 164

 Score =  248 bits (634), Expect = 1e-66
 Identities = 124/161 (77%), Positives = 132/161 (81%), Gaps = 5/161 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVN   FF+     +P GRISI+LFADK  KTAEN  ALS GEKGF YKGSCFHRIIPGF
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC GGDFT HNG+G K IYGEKFDDEN I K TGSGILS  NAGPNTNGSQFFIC+AK+E
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           WLDG+HV FGKVKE +NIVEAME FG RN KTSKKITIADC
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADC 161


>gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 272

 Score =  248 bits (633), Expect = 1e-66
 Identities = 120/161 (74%), Positives = 134/161 (83%), Gaps = 5/161 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVNPT FF+     +P G +S ++FADK  KTA+N  ALS GEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC GGDFT++NG+GGK +YGEKFDDENFILK+   GILS   AGPNTNGSQFFIC+AK+E
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAKTE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           WL G+HV FGKVKEGMNIVEAME FGSRNGKTSKKITIADC
Sbjct: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADC 161


>gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E
           [Homo sapiens]
          Length = 164

 Score =  246 bits (627), Expect = 7e-66
 Identities = 123/161 (76%), Positives = 130/161 (80%), Gaps = 5/161 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVN   FF      +P GRISI+LFADK PKTAEN  ALS GEKGF YKGSCFHRIIPGF
Sbjct: 1   MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC GGDFT  NG+G K IYGEKFDDEN I K TGSGILS  NAGPNTNGSQFFIC+AK+E
Sbjct: 61  MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           WLDG+HV FGKVKE +NIVEA E FG RN KTSKKITIADC
Sbjct: 121 WLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADC 161


>gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score =  246 bits (627), Expect = 7e-66
 Identities = 119/161 (73%), Positives = 133/161 (82%), Gaps = 5/161 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVNPT FF+     +P G +S ++FADK  KTA+N  ALS GEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC GGDFT++NG+GGK +YGEKFDDENFILK+   GILS   AGPNTNGSQFFIC+A +E
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           WL G+HV FGKVKEGMNIVEAME FGSRNGKTSKKITIADC
Sbjct: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADC 161


>gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score =  246 bits (627), Expect = 7e-66
 Identities = 119/161 (73%), Positives = 133/161 (82%), Gaps = 5/161 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVNPT FF+     +P G +S ++FADK  KTA+N  ALS GEKG  YKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC GGDFT++NG+GGK +YGEKFDDENFILK+   GILS   AGPNTNGSQFFIC+A +E
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           WL G+HV FGKVKEGMNIVEAME FGSRNGKTSKKITIADC
Sbjct: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADC 161


>gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 210

 Score =  243 bits (620), Expect = 5e-65
 Identities = 120/160 (75%), Positives = 130/160 (81%), Gaps = 5/160 (3%)

Query: 2   VNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFM 56
           VNPT FF+     EP G +S +LFADKFPK+AE V ALS GEKGFGYKGSCFHRIIPGFM
Sbjct: 48  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 107

Query: 57  CHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEW 116
           C GGDFT H  +GGK +Y EKFDDENFILK TG GILS  NAGPNTN SQ FIC+AK+E 
Sbjct: 108 CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 167

Query: 117 LDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           LDG+HV FG VKEGM IVEAME FG RNGKTSK+ITIADC
Sbjct: 168 LDGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADC 207


>gi|239751853 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 186

 Score =  243 bits (620), Expect = 5e-65
 Identities = 120/160 (75%), Positives = 130/160 (81%), Gaps = 5/160 (3%)

Query: 2   VNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFM 56
           VNPT FF+     EP G +S +LFADKFPK+AE V ALS GEKGFGYKGSCFHRIIPGFM
Sbjct: 24  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 83

Query: 57  CHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEW 116
           C GGDFT H  +GGK +Y EKFDDENFILK TG GILS  NAGPNTN SQ FIC+AK+E 
Sbjct: 84  CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 143

Query: 117 LDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           LDG+HV FG VKEGM IVEAME FG RNGKTSK+ITIADC
Sbjct: 144 LDGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADC 183


>gi|113428306 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 186

 Score =  243 bits (620), Expect = 5e-65
 Identities = 120/160 (75%), Positives = 130/160 (81%), Gaps = 5/160 (3%)

Query: 2   VNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFM 56
           VNPT FF+     EP G +S +LFADKFPK+AE V ALS GEKGFGYKGSCFHRIIPGFM
Sbjct: 24  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 83

Query: 57  CHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEW 116
           C GGDFT H  +GGK +Y EKFDDENFILK TG GILS  NAGPNTN SQ FIC+AK+E 
Sbjct: 84  CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 143

Query: 117 LDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           LDG+HV FG VKEGM IVEAME FG RNGKTSK+ITIADC
Sbjct: 144 LDGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADC 183


>gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  242 bits (618), Expect = 8e-65
 Identities = 119/161 (73%), Positives = 128/161 (79%), Gaps = 5/161 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVNPT F +     EP G I  +LFADK PKT EN  ALS GEKGFGYKGSCFHRIIPG 
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC  GDFT HNG+GGK I GEKFDD+NFILK  G GILS  N GPNTN  Q FIC+AK+E
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           WLDG+HV FGKVKEG+NIVEAME FGSRNGKTSKKITI+DC
Sbjct: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDC 161


>gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  242 bits (618), Expect = 8e-65
 Identities = 119/161 (73%), Positives = 128/161 (79%), Gaps = 5/161 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVNPT F +     EP G I  +LFADK PKT EN  ALS GEKGFGYKGSCFHRIIPG 
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC  GDFT HNG+GGK I GEKFDD+NFILK  G GILS  N GPNTN  Q FIC+AK+E
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           WLDG+HV FGKVKEG+NIVEAME FGSRNGKTSKKITI+DC
Sbjct: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDC 161


>gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  242 bits (618), Expect = 8e-65
 Identities = 119/161 (73%), Positives = 128/161 (79%), Gaps = 5/161 (3%)

Query: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVNPT F +     EP G I  +LFADK PKT EN  ALS GEKGFGYKGSCFHRIIPG 
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC  GDFT HNG+GGK I GEKFDD+NFILK  G GILS  N GPNTN  Q FIC+AK+E
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
           WLDG+HV FGKVKEG+NIVEAME FGSRNGKTSKKITI+DC
Sbjct: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDC 161


>gi|239756631 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 166

 Score =  225 bits (573), Expect = 1e-59
 Identities = 116/161 (72%), Positives = 124/161 (77%), Gaps = 6/161 (3%)

Query: 1   MVNPTKFF-----NEPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVNPT FF     ++P   IS  LFADK PKTAEN  ALS GEKGFGYKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFEMAIDSKPLSHISFXLFADKLPKTAENFHALSTGEKGFGYKGSCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC GG FT HNG+GGK IYGEK DDENFILK T  G LS  NAGPNTNGS+FFIC+AK+ 
Sbjct: 61  MCQGGGFTCHNGTGGKSIYGEKLDDENFILKHTCPGTLSMANAGPNTNGSRFFICTAKTV 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
            +  +HV   KVKEGMNIV AME FGSRNGKTSK IT ADC
Sbjct: 121 -VGQKHVVSSKVKEGMNIVGAMEHFGSRNGKTSKMITTADC 160


>gi|239751117 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 166

 Score =  225 bits (573), Expect = 1e-59
 Identities = 116/161 (72%), Positives = 124/161 (77%), Gaps = 6/161 (3%)

Query: 1   MVNPTKFF-----NEPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55
           MVNPT FF     ++P   IS  LFADK PKTAEN  ALS GEKGFGYKGSCFHRIIPGF
Sbjct: 1   MVNPTVFFEMAIDSKPLSHISFXLFADKLPKTAENFHALSTGEKGFGYKGSCFHRIIPGF 60

Query: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115
           MC GG FT HNG+GGK IYGEK DDENFILK T  G LS  NAGPNTNGS+FFIC+AK+ 
Sbjct: 61  MCQGGGFTCHNGTGGKSIYGEKLDDENFILKHTCPGTLSMANAGPNTNGSRFFICTAKTV 120

Query: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156
            +  +HV   KVKEGMNIV AME FGSRNGKTSK IT ADC
Sbjct: 121 -VGQKHVVSSKVKEGMNIVGAMEHFGSRNGKTSKMITTADC 160


>gi|239755072 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  220 bits (561), Expect = 3e-58
 Identities = 104/139 (74%), Positives = 115/139 (82%)

Query: 18  QLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGGDFTHHNGSGGKYIYGEK 77
           +LF +K  K + N  A S  EKGFGYKGSCFHRIIPGFMC  GDFT+HNG+G K +YGEK
Sbjct: 80  KLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYGEK 139

Query: 78  FDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGEHVFFGKVKEGMNIVEAM 137
           FD ENFILK TG GILS  N G NTN SQFFIC+AK+EWLDG+HV FGKVKEGM+I+EAM
Sbjct: 140 FDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIMEAM 199

Query: 138 EGFGSRNGKTSKKITIADC 156
           E FGSRNGKTSKKITIADC
Sbjct: 200 ERFGSRNGKTSKKITIADC 218


>gi|239749598 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  220 bits (561), Expect = 3e-58
 Identities = 104/139 (74%), Positives = 115/139 (82%)

Query: 18  QLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGGDFTHHNGSGGKYIYGEK 77
           +LF +K  K + N  A S  EKGFGYKGSCFHRIIPGFMC  GDFT+HNG+G K +YGEK
Sbjct: 80  KLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYGEK 139

Query: 78  FDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGEHVFFGKVKEGMNIVEAM 137
           FD ENFILK TG GILS  N G NTN SQFFIC+AK+EWLDG+HV FGKVKEGM+I+EAM
Sbjct: 140 FDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIMEAM 199

Query: 138 EGFGSRNGKTSKKITIADC 156
           E FGSRNGKTSKKITIADC
Sbjct: 200 ERFGSRNGKTSKKITIADC 218


>gi|239743865 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  220 bits (561), Expect = 3e-58
 Identities = 104/139 (74%), Positives = 115/139 (82%)

Query: 18  QLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGGDFTHHNGSGGKYIYGEK 77
           +LF +K  K + N  A S  EKGFGYKGSCFHRIIPGFMC  GDFT+HNG+G K +YGEK
Sbjct: 80  KLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYGEK 139

Query: 78  FDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGEHVFFGKVKEGMNIVEAM 137
           FD ENFILK TG GILS  N G NTN SQFFIC+AK+EWLDG+HV FGKVKEGM+I+EAM
Sbjct: 140 FDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIMEAM 199

Query: 138 EGFGSRNGKTSKKITIADC 156
           E FGSRNGKTSKKITIADC
Sbjct: 200 ERFGSRNGKTSKKITIADC 218


>gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]
          Length = 207

 Score =  217 bits (553), Expect = 3e-57
 Identities = 98/147 (66%), Positives = 118/147 (80%)

Query: 10  EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGFMCHGGDFTHHNGSG 69
           +P GR+ ++L AD  PKTAEN  AL  GEKGFGYKGS FHR+IP FMC  GDFT+HNG+G
Sbjct: 57  KPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGDFTNHNGTG 116

Query: 70  GKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSEWLDGEHVFFGKVKE 129
           GK IYG +F DENF LK  G G+LS  NAGPNTNGSQFFIC+ K++WLDG+HV FG VKE
Sbjct: 117 GKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVKE 176

Query: 130 GMNIVEAMEGFGSRNGKTSKKITIADC 156
           GM++V+ +E FGS++G+TSKKI I DC
Sbjct: 177 GMDVVKKIESFGSKSGRTSKKIVITDC 203


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.140    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,507,447
Number of Sequences: 37866
Number of extensions: 305907
Number of successful extensions: 460
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 351
Number of HSP's gapped (non-prelim): 82
length of query: 156
length of database: 18,247,518
effective HSP length: 94
effective length of query: 62
effective length of database: 14,688,114
effective search space: 910663068
effective search space used: 910663068
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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