Guide to the Human Genome
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Search of human proteins with 239751080

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239751080 PREDICTED: hypothetical protein XP_002347700 [Homo
sapiens]
         (330 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239751080 PREDICTED: hypothetical protein XP_002347700 [Homo ...   691   0.0  
gi|239745567 PREDICTED: hypothetical protein XP_002344149 [Homo ...   691   0.0  
gi|156071470 hyperpolarization activated cyclic nucleotide-gated...    49   5e-06
gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]            45   1e-04
gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]            45   1e-04
gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo ...    45   1e-04
gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]            45   1e-04
gi|68563515 keratinocyte proline-rich protein [Homo sapiens]           44   2e-04
gi|4503825 frizzled 1 [Homo sapiens]                                   43   3e-04
gi|5730045 solute carrier family 16, member 2 [Homo sapiens]           43   3e-04
gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]         43   3e-04
gi|58761548 tau tubulin kinase 1 [Homo sapiens]                        41   0.002
gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]            40   0.002
gi|62953127 polyhomeotic 1-like [Homo sapiens]                         40   0.003
gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]               40   0.003
gi|150378543 MYST histone acetyltransferase (monocytic leukemia)...    40   0.004
gi|150378463 MYST histone acetyltransferase (monocytic leukemia)...    40   0.004
gi|150378493 MYST histone acetyltransferase (monocytic leukemia)...    40   0.004
gi|209862845 nuclear factor of activated T-cells, cytoplasmic, c...    39   0.005
gi|239757128 PREDICTED: similar to mCG141871 [Homo sapiens]            39   0.005
gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens]            39   0.005
gi|114431236 zinc finger protein 462 [Homo sapiens]                    39   0.006
gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]     39   0.006
gi|13376335 hypothetical protein LOC79946 [Homo sapiens]               39   0.008
gi|118402590 myosin XV [Homo sapiens]                                  38   0.011
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap...    38   0.011
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re...    38   0.014
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re...    38   0.014
gi|14249464 zinc finger and BTB domain containing 45 [Homo sapiens]    38   0.014
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         38   0.014

>gi|239751080 PREDICTED: hypothetical protein XP_002347700 [Homo
           sapiens]
          Length = 330

 Score =  691 bits (1784), Expect = 0.0
 Identities = 330/330 (100%), Positives = 330/330 (100%)

Query: 1   MASHLDYMTSKLHRLSSGGFSPRGGRGTGGLGIAASHLTGGRIAAYSSPGLVAEEGTHSI 60
           MASHLDYMTSKLHRLSSGGFSPRGGRGTGGLGIAASHLTGGRIAAYSSPGLVAEEGTHSI
Sbjct: 1   MASHLDYMTSKLHRLSSGGFSPRGGRGTGGLGIAASHLTGGRIAAYSSPGLVAEEGTHSI 60

Query: 61  GDHHQTRKELKERESHSGPVIATSSTPTQTHHQWPGNHVQLHVQLKQVEVEEDDCHQPEE 120
           GDHHQTRKELKERESHSGPVIATSSTPTQTHHQWPGNHVQLHVQLKQVEVEEDDCHQPEE
Sbjct: 61  GDHHQTRKELKERESHSGPVIATSSTPTQTHHQWPGNHVQLHVQLKQVEVEEDDCHQPEE 120

Query: 121 DSDEHHPAIGRIQVVRGVRNQRPHQQPQHLGGCSSMSAPRRERTKPRSGRSADTEASAPC 180
           DSDEHHPAIGRIQVVRGVRNQRPHQQPQHLGGCSSMSAPRRERTKPRSGRSADTEASAPC
Sbjct: 121 DSDEHHPAIGRIQVVRGVRNQRPHQQPQHLGGCSSMSAPRRERTKPRSGRSADTEASAPC 180

Query: 181 AGLLVRVLTFDGNSAMAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEAS 240
           AGLLVRVLTFDGNSAMAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEAS
Sbjct: 181 AGLLVRVLTFDGNSAMAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEAS 240

Query: 241 GLGAWGARCGRDPGSAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQH 300
           GLGAWGARCGRDPGSAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQH
Sbjct: 241 GLGAWGARCGRDPGSAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQH 300

Query: 301 QPRPLRRPPPGQAARWEFPGSRPGRGSFRA 330
           QPRPLRRPPPGQAARWEFPGSRPGRGSFRA
Sbjct: 301 QPRPLRRPPPGQAARWEFPGSRPGRGSFRA 330


>gi|239745567 PREDICTED: hypothetical protein XP_002344149 [Homo
           sapiens]
          Length = 330

 Score =  691 bits (1784), Expect = 0.0
 Identities = 330/330 (100%), Positives = 330/330 (100%)

Query: 1   MASHLDYMTSKLHRLSSGGFSPRGGRGTGGLGIAASHLTGGRIAAYSSPGLVAEEGTHSI 60
           MASHLDYMTSKLHRLSSGGFSPRGGRGTGGLGIAASHLTGGRIAAYSSPGLVAEEGTHSI
Sbjct: 1   MASHLDYMTSKLHRLSSGGFSPRGGRGTGGLGIAASHLTGGRIAAYSSPGLVAEEGTHSI 60

Query: 61  GDHHQTRKELKERESHSGPVIATSSTPTQTHHQWPGNHVQLHVQLKQVEVEEDDCHQPEE 120
           GDHHQTRKELKERESHSGPVIATSSTPTQTHHQWPGNHVQLHVQLKQVEVEEDDCHQPEE
Sbjct: 61  GDHHQTRKELKERESHSGPVIATSSTPTQTHHQWPGNHVQLHVQLKQVEVEEDDCHQPEE 120

Query: 121 DSDEHHPAIGRIQVVRGVRNQRPHQQPQHLGGCSSMSAPRRERTKPRSGRSADTEASAPC 180
           DSDEHHPAIGRIQVVRGVRNQRPHQQPQHLGGCSSMSAPRRERTKPRSGRSADTEASAPC
Sbjct: 121 DSDEHHPAIGRIQVVRGVRNQRPHQQPQHLGGCSSMSAPRRERTKPRSGRSADTEASAPC 180

Query: 181 AGLLVRVLTFDGNSAMAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEAS 240
           AGLLVRVLTFDGNSAMAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEAS
Sbjct: 181 AGLLVRVLTFDGNSAMAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEAS 240

Query: 241 GLGAWGARCGRDPGSAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQH 300
           GLGAWGARCGRDPGSAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQH
Sbjct: 241 GLGAWGARCGRDPGSAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQH 300

Query: 301 QPRPLRRPPPGQAARWEFPGSRPGRGSFRA 330
           QPRPLRRPPPGQAARWEFPGSRPGRGSFRA
Sbjct: 301 QPRPLRRPPPGQAARWEFPGSRPGRGSFRA 330


>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
           potassium channel 2 [Homo sapiens]
          Length = 889

 Score = 49.3 bits (116), Expect = 5e-06
 Identities = 27/64 (42%), Positives = 29/64 (45%), Gaps = 7/64 (10%)

Query: 246 GARCGRDPGSAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRPL 305
           G R G  PG+ PA G        PPPP P P + QP P P P   PG      QH PR  
Sbjct: 7   GGRPGESPGATPAPGP-------PPPPPPAPPQQQPPPPPPPAPPPGPGPAPPQHPPRAE 59

Query: 306 RRPP 309
             PP
Sbjct: 60  ALPP 63



 Score = 31.6 bits (70), Expect = 1.0
 Identities = 24/71 (33%), Positives = 25/71 (35%), Gaps = 25/71 (35%)

Query: 269 PPPPQPRPVRGQ----------------PRPLPGPVNNPGSVNRLRQHQPRPLRRPPPGQ 312
           PPPP P  V                    RPL GP         L    PR +RRPPPG 
Sbjct: 715 PPPPPPPQVTSAIATLQQAAAMSFCPQVARPLVGP---------LALGSPRLVRRPPPGP 765

Query: 313 AARWEFPGSRP 323
           A     PG  P
Sbjct: 766 APAAASPGPPP 776


>gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 556

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 48/189 (25%), Positives = 64/189 (33%), Gaps = 31/189 (16%)

Query: 137 GVRNQRPHQQPQHLGGCSSMSAPRRERTKPRSGRSADTEASAPC-AGLLVRVLTFDGNSA 195
           G R +R + +P           P+R R +P  G          C +G  +  L       
Sbjct: 333 GPRERRVYPRPPSKSQIQRRIRPKRSRRRPYQGTPGRDRPLRDCYSGPRLGYLRGPETRR 392

Query: 196 MAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEASGLGAWGARCGRDPGS 255
               +  +G+ GR  +        P +  PRL    W    ++A             PG 
Sbjct: 393 RGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAP------------PGP 440

Query: 256 APAAGAAPLTLCSPPPPQPRPVRGQP--RPLPGPVNNPGSVNRLRQHQPRPLRRPPPGQA 313
            PA    P     PPPP P P R +P  R  PGP             QP    RPP  Q+
Sbjct: 441 TPARRGLPRPPPPPPPPLPPPPRREPCHRAWPGPA------------QPLGNLRPPVQQS 488

Query: 314 ARWEFPGSR 322
           A    PG R
Sbjct: 489 A----PGGR 493


>gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 884

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 48/189 (25%), Positives = 64/189 (33%), Gaps = 31/189 (16%)

Query: 137 GVRNQRPHQQPQHLGGCSSMSAPRRERTKPRSGRSADTEASAPC-AGLLVRVLTFDGNSA 195
           G R +R + +P           P+R R +P  G          C +G  +  L       
Sbjct: 661 GPRERRVYPRPPSKSQIQRRIRPKRSRRRPYQGTPGRDRPLRDCYSGPRLGYLRGPETRR 720

Query: 196 MAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEASGLGAWGARCGRDPGS 255
               +  +G+ GR  +        P +  PRL    W    ++A             PG 
Sbjct: 721 RGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAP------------PGP 768

Query: 256 APAAGAAPLTLCSPPPPQPRPVRGQP--RPLPGPVNNPGSVNRLRQHQPRPLRRPPPGQA 313
            PA    P     PPPP P P R +P  R  PGP             QP    RPP  Q+
Sbjct: 769 TPARRGLPRPPPPPPPPLPPPPRREPCHRAWPGPA------------QPLGNLRPPVQQS 816

Query: 314 ARWEFPGSR 322
           A    PG R
Sbjct: 817 A----PGGR 821


>gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo
           sapiens]
          Length = 884

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 48/189 (25%), Positives = 64/189 (33%), Gaps = 31/189 (16%)

Query: 137 GVRNQRPHQQPQHLGGCSSMSAPRRERTKPRSGRSADTEASAPC-AGLLVRVLTFDGNSA 195
           G R +R + +P           P+R R +P  G          C +G  +  L       
Sbjct: 661 GPRERRVYPRPPSKSQIQRRIRPKRSRRRPYQGTPGRDRPLRDCYSGPRLGYLRGPETRR 720

Query: 196 MAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEASGLGAWGARCGRDPGS 255
               +  +G+ GR  +        P +  PRL    W    ++A             PG 
Sbjct: 721 RGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAP------------PGP 768

Query: 256 APAAGAAPLTLCSPPPPQPRPVRGQP--RPLPGPVNNPGSVNRLRQHQPRPLRRPPPGQA 313
            PA    P     PPPP P P R +P  R  PGP             QP    RPP  Q+
Sbjct: 769 TPARRGLPRPPPPPPPPLPPPPRREPCHRAWPGPA------------QPLGNLRPPVQQS 816

Query: 314 ARWEFPGSR 322
           A    PG R
Sbjct: 817 A----PGGR 821


>gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 884

 Score = 44.7 bits (104), Expect = 1e-04
 Identities = 48/189 (25%), Positives = 64/189 (33%), Gaps = 31/189 (16%)

Query: 137 GVRNQRPHQQPQHLGGCSSMSAPRRERTKPRSGRSADTEASAPC-AGLLVRVLTFDGNSA 195
           G R +R + +P           P+R R +P  G          C +G  +  L       
Sbjct: 661 GPRERRVYPRPPSKSQIQRRIRPKRSRRRPYQGTPGRDRPLRDCYSGPRLGYLRGPETRR 720

Query: 196 MAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEASGLGAWGARCGRDPGS 255
               +  +G+ GR  +        P +  PRL    W    ++A             PG 
Sbjct: 721 RGGGVWWKGKAGRLAKRCGERHEAPEQGKPRLPPQAWHDQGRDAP------------PGP 768

Query: 256 APAAGAAPLTLCSPPPPQPRPVRGQP--RPLPGPVNNPGSVNRLRQHQPRPLRRPPPGQA 313
            PA    P     PPPP P P R +P  R  PGP             QP    RPP  Q+
Sbjct: 769 TPARRGLPRPPPPPPPPLPPPPRREPCHRAWPGPA------------QPLGNLRPPVQQS 816

Query: 314 ARWEFPGSR 322
           A    PG R
Sbjct: 817 A----PGGR 821


>gi|68563515 keratinocyte proline-rich protein [Homo sapiens]
          Length = 579

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 59/210 (28%), Positives = 80/210 (38%), Gaps = 51/210 (24%)

Query: 159 PRRERTKPRSGRSADTEASAPCAGLLVRVLTFDG-NSAMAAPLASRGRYGRR--RRPSSG 215
           PRR +  PRS   +      PC+   + +   +G  +    P  S   Y  R  RRP S 
Sbjct: 259 PRRLQLFPRS--CSPPRRFEPCSSSYLPLRPSEGFPNYCTPPRRSEPIYNSRCPRRPISS 316

Query: 216 -------GCRL-------PRRFSPR---LRIPVWLQALQEASGLGAWGARCGR-----DP 253
                   CR+       PR+  P+   + IP   +  Q      +WGA C       +P
Sbjct: 317 CSQRRGPKCRIEISSPCCPRQVPPQRCPVEIPPIRRRSQSCGPQPSWGASCPELRPHVEP 376

Query: 254 GSAPA---------AGAAPLTLCSPPPPQPR-------PVRGQPRPLP----GPVNNPGS 293
              P+            +PL  C PP P+PR        +  +PRPLP     P   P  
Sbjct: 377 RPLPSFCPPRRLDQCPESPLQRCPPPAPRPRLRPEPCISLEPRPRPLPRQLSEPCLYPEP 436

Query: 294 VNRLRQHQPRPLRRPPPGQAARWEFPGSRP 323
           +  LR   PRP+  P PGQ    E P  RP
Sbjct: 437 LPALRP-TPRPVPLPRPGQC---EIPEPRP 462


>gi|4503825 frizzled 1 [Homo sapiens]
          Length = 647

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 38/113 (33%), Positives = 48/113 (42%), Gaps = 22/113 (19%)

Query: 162 ERTKPRSGRSADTEASAP-CAGLLVRVLTFDGNSAMAAPLASRGRYGRRRRPSSGGCRLP 220
           E   P+  R+A   AS   CAG L   L  +G+          G  G RRRP       P
Sbjct: 3   EEEAPKKSRAAGGGASWELCAGALSARLAEEGS----------GDAGGRRRPPVD----P 48

Query: 221 RRFSPRLRIPVWLQALQEASGLGAWGARCGRDPGSAPAAGAAPLTLCSPPPPQ 273
           RR + +L + +WL  L+    LG      G+ PG  P  G  P     PPPPQ
Sbjct: 49  RRLARQLLLLLWL--LEAPLLLGVRAQAAGQGPGQGPGPGQQP-----PPPPQ 94


>gi|5730045 solute carrier family 16, member 2 [Homo sapiens]
          Length = 613

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 38/141 (26%), Positives = 56/141 (39%), Gaps = 13/141 (9%)

Query: 194 SAMAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEASGLGAWGARCGRDP 253
           S  ++P +S     R +     G   P   SP   + +  QA +EA G      +  ++P
Sbjct: 40  SGSSSPPSSSSCSSRNKYQPQSGSSGPSSHSPPAAMALQSQASEEAKGPWQEADQEQQEP 99

Query: 254 GSAPAAGAAPLTLCSP-----PPPQPRPVRGQPRPLPGPVNNPG-SVNRLRQHQPRPLRR 307
             +P   + P     P     PPP+P+P   +P+PLP P   P       R H+P     
Sbjct: 100 VGSPEPESEPEPEPEPEPVPVPPPEPQP---EPQPLPDPAPLPELEFESERVHEP----E 152

Query: 308 PPPGQAARWEFPGSRPGRGSF 328
           P P    R    G +P  G F
Sbjct: 153 PTPTVETRGTARGFQPPEGGF 173


>gi|116256356 alpha 4 type IV collagen precursor [Homo sapiens]
          Length = 1690

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 32/76 (42%), Positives = 34/76 (44%), Gaps = 8/76 (10%)

Query: 253  PGSAPAAGAAPLTLCSPPPP--QPRPVRGQPRPLPGPVNNPGSVNRLRQHQ-----PRPL 305
            PG A A G AP  +  P PP  Q  P    PR  PGP   PGSV+ LR        P P 
Sbjct: 1241 PGPAGATGRAPKDIPDPGPPGDQGPPGPDGPRGAPGPPGLPGSVDLLRGEPGDCGLPGPP 1300

Query: 306  RRP-PPGQAARWEFPG 320
              P PPG      FPG
Sbjct: 1301 GPPGPPGPPGYKGFPG 1316


>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
          Length = 1321

 Score = 40.8 bits (94), Expect = 0.002
 Identities = 82/329 (24%), Positives = 111/329 (33%), Gaps = 72/329 (21%)

Query: 12   LHRLSSGGFSPRGGRGTGGLGIAASHLTGGRIAAYSSPGLVAEEGTHSIGDHHQTRKELK 71
            L   S GG    G R     G+A S L G  I           EG+   G   +T  E+ 
Sbjct: 962  LELASDGGAVEEGARAPLENGLALSGLNGAEI-----------EGSALSGAPRETPSEMA 1010

Query: 72   ERESHSGPVIATSSTP--------------TQTHHQWPGNHVQLHVQLKQVEVEEDDCHQ 117
                 +GP +A    P              +   H  PG+  +  + +  +  EED   +
Sbjct: 1011 TNSLPNGPALADGPAPVSPLEPSPEKVATISPRRHAMPGSRPRSRIPV--LLSEEDTGSE 1068

Query: 118  PEE--DSDEHHPAIGRIQ--VVRGVRNQRPHQQPQHLGGCSSMSAPRRER----TKPRSG 169
            P     + E      R Q  + R V  +R  +    L   +S S+   +R    T   +G
Sbjct: 1069 PSGSLSAKERWSKRARPQQDLARLVMEKRQGRLLLRLASGASSSSSEEQRRASETLSGTG 1128

Query: 170  RSADTEASAPCAGLLVRVLTFDGNSAMAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRI 229
               DT AS P A L          S  AA   S               R+PR     LR+
Sbjct: 1129 SEEDTPASEPAAAL-------PRKSGRAAATRS---------------RIPRPIG--LRM 1164

Query: 230  PVWLQALQEASGLGAWGARCGRDPGSAPAAGAAPLT--LCSPPPPQPRPVRGQPRPLPGP 287
            P+ + A Q AS          R  G+APA   A  +      PP        +P+  PG 
Sbjct: 1165 PMPVAAQQPAS----------RSHGAAPALDTAITSRLQLQTPPGSATAADLRPKQPPGR 1214

Query: 288  VNNPGSVNR-LRQHQPRPLRRPPPGQAAR 315
               PG      R   PR  R P    AAR
Sbjct: 1215 GLGPGRAQAGARPPAPRSPRLPASTSAAR 1243


>gi|239748777 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 350

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 64/227 (28%), Positives = 83/227 (36%), Gaps = 40/227 (17%)

Query: 127 PAIGRIQVVRGVRNQRPHQQPQHLGGCSSMSAPRRERTKPRSGRSA------DTEASAP- 179
           PA  R+    G R     +        +S S P      P S R+A         A+AP 
Sbjct: 20  PARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPPGFIHPPSSRAAVHSRLRAAPAAAPR 79

Query: 180 -----CAGLLVRVLTFDGNSAMAAPLASRGRY-----GRR--RRPSSGGCRLPRRFSPRL 227
                 AG   R     G+   AA  A+  +      GRR  RRP       PR   P  
Sbjct: 80  LLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRRWRRRPGPSPPLQPRSRHPHT 139

Query: 228 RIPVWLQALQEASGLGAWGARCGRDPGSAPAAGAAPLTLCSPPPPQPR------PVRGQP 281
           R P   +A+ EA+ L          PG+ P A + P    SP P + R      P RG P
Sbjct: 140 RYP---RAVPEATPLRP-------PPGTRPRAKSRPGCRSSPFPARSRTPGEAGPPRGDP 189

Query: 282 RP-LPGPVNNPGSVNRLRQ----HQPRPLRRPPPGQAARWEFPGSRP 323
           RP  P P ++P     LR+      P P RR     A +   P  +P
Sbjct: 190 RPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQPQP 236


>gi|62953127 polyhomeotic 1-like [Homo sapiens]
          Length = 1004

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 70/313 (22%), Positives = 106/313 (33%), Gaps = 48/313 (15%)

Query: 24  GGRGTGGLGIAASHLTGGRIAAYSSPGLV-----AEEGTHSIGDHHQTRKELKERESHSG 78
           GG+  GGLG   S   GG        G+V     A+  T S G   +      ++    G
Sbjct: 284 GGQAHGGLGQLPSSGMGGGSCPRKGTGVVQPLPAAQTVTVSQGSQTEAESAAAKKAEADG 343

Query: 79  -------------------PVIATSSTPTQTH-HQWPGNHVQLHVQLKQVEVEEDDC--H 116
                                + +S+T TQ   H       Q+H+Q KQV +++     H
Sbjct: 344 SGQQNVGMNLTRTATPAPSQTLISSATYTQIQPHSLIQQQQQIHLQQKQVVIQQQIAIHH 403

Query: 117 QPE---EDSDEHHPAIGRIQVVRGVRNQRPHQQPQHLGGCSSMSAPRRERTKP------- 166
           Q +     S   H A   +Q+ +  + Q+  QQ Q     ++++AP+  +  P       
Sbjct: 404 QQQFQHRQSQLLHTAT-HLQLAQQQQQQQQQQQQQQQPQATTLTAPQPPQVPPTQQVPPS 462

Query: 167 RSGRSADTEASAPCAGLLVRVLTFDGNSAMAAPLASRGRYGRRRRPSSGGCRLPRRFSPR 226
           +S + A T    P        L  D       P+ S+      + P  G  ++     P 
Sbjct: 463 QSQQQAQTLVVQPMLQSSPLSLPPDAAPKPPIPIQSKPPVAPIKPPQLGAAKMSAAQQPP 522

Query: 227 LRIPVWL-------QALQEASGLGAWGARCGRDPGSAPAAGAAPLTLCSPPPPQPRPVRG 279
             IPV +        A  +A GL    A      G      +    L S PP    P   
Sbjct: 523 PHIPVQVVGTRQPGTAQAQALGLAQLAAAVPTSRGMPGTVQSGQAHLASSPPSSQAPGAL 582

Query: 280 QPRPLPGPVNNPG 292
           Q  P   P   PG
Sbjct: 583 QECP---PTLAPG 592


>gi|72004269 tetra-peptide repeat homeobox [Homo sapiens]
          Length = 411

 Score = 40.0 bits (92), Expect = 0.003
 Identities = 28/87 (32%), Positives = 36/87 (41%), Gaps = 18/87 (20%)

Query: 253 PGSAPAAGAAPLTLCSPPP-PQPRPVRGQ-----PRPLPGPVNNPGSVNRLRQHQPRPLR 306
           P   P  G  P  +  P P P P P+ G      P P+PGP++ PG +       P P +
Sbjct: 218 PNPGPIPGPIPGPISGPNPGPIPGPISGPNPGLIPGPIPGPISGPGPI---IGPIPSPAQ 274

Query: 307 RPPPGQ---------AARWEFPGSRPG 324
            P PG+           R   PGS PG
Sbjct: 275 IPGPGRLQGPGPILSPGRMRSPGSLPG 301



 Score = 35.0 bits (79), Expect = 0.092
 Identities = 48/194 (24%), Positives = 64/194 (32%), Gaps = 51/194 (26%)

Query: 139 RNQRPHQQPQHLGGCSSMSA------PRRERTKPRSGRSADTEASAPCAGLLVRVLTFDG 192
           R +R  QQPQ + G     A      P    + P+ G S    A+ P    L        
Sbjct: 22  RERRLQQQPQRVPGQRGRGARAAPLVPAASASAPQRGPSGILPAAEPTICSL-------- 73

Query: 193 NSAMAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEASGLGAWGARCGRD 252
           + A   P   R + G     S G   +P       +IP               G   G  
Sbjct: 74  HQAWGGP-GCRAQKGIPAALSPGPGPIPAPIPGPAQIP---------------GPLPGSI 117

Query: 253 PGSAPAAGAAPLTLCSPPP---------------PQPRPVRGQPRPLPGPVNNPGSVNRL 297
           PG  P     P  + +P P               P P P+ G P P+PGP++ P S    
Sbjct: 118 PGPIPGPAQIPSPIPAPIPGPISGPVQIPGPFRGPIPGPISG-PAPIPGPISGPFS---- 172

Query: 298 RQHQPRPLRRPPPG 311
               P P+  P PG
Sbjct: 173 -GPNPGPIPGPNPG 185



 Score = 33.9 bits (76), Expect = 0.21
 Identities = 26/82 (31%), Positives = 35/82 (42%), Gaps = 16/82 (19%)

Query: 253 PGSAPAAGAAPLTLCSPPP-PQPRPVRGQ---------PRPLPGPVNNPGSVNRLRQHQP 302
           P S P +G  P  +  P P P P P+ G          P P+PGP++ P     +    P
Sbjct: 166 PISGPFSGPNPGPIPGPNPGPIPGPISGPIPGPISVPIPGPIPGPISGP-----ISGPNP 220

Query: 303 RPLRRPPPGQAARWEFPGSRPG 324
            P+  P PG  +    PG  PG
Sbjct: 221 GPIPGPIPGPIS-GPNPGPIPG 241



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 22/65 (33%), Positives = 29/65 (44%), Gaps = 13/65 (20%)

Query: 251 RDPGSAPAAGAAPLTLCSPPP---PQPRPVRG-QPRPLPGPVNNPGSVNRLRQHQPRPLR 306
           R P   P +G AP+      P   P P P+ G  P P+PGP++ P          P P+ 
Sbjct: 150 RGPIPGPISGPAPIPGPISGPFSGPNPGPIPGPNPGPIPGPISGP---------IPGPIS 200

Query: 307 RPPPG 311
            P PG
Sbjct: 201 VPIPG 205


>gi|150378543 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 269  PPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRPLRRPPP 310
            PPP QP+P   QP+P P P   P      +Q QP+P + PPP
Sbjct: 1654 PPPQQPQPPPPQPQPAPQPP--PPQQQPQQQPQPQPQQPPPP 1693



 Score = 29.3 bits (64), Expect = 5.1
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 18/55 (32%)

Query: 269  PPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRPLRRPPPGQAARWEFPGSRP 323
            PPPP P+    QP+P P               QP+P  +PPP Q    + P  +P
Sbjct: 1651 PPPPPPQ----QPQPPPP--------------QPQPAPQPPPPQQQPQQQPQPQP 1687


>gi|150378463 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 269  PPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRPLRRPPP 310
            PPP QP+P   QP+P P P   P      +Q QP+P + PPP
Sbjct: 1654 PPPQQPQPPPPQPQPAPQPP--PPQQQPQQQPQPQPQQPPPP 1693



 Score = 29.3 bits (64), Expect = 5.1
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 18/55 (32%)

Query: 269  PPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRPLRRPPPGQAARWEFPGSRP 323
            PPPP P+    QP+P P               QP+P  +PPP Q    + P  +P
Sbjct: 1651 PPPPPPQ----QPQPPPP--------------QPQPAPQPPPPQQQPQQQPQPQP 1687


>gi|150378493 MYST histone acetyltransferase (monocytic leukemia) 3
            [Homo sapiens]
          Length = 2004

 Score = 39.7 bits (91), Expect = 0.004
 Identities = 19/42 (45%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 269  PPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRPLRRPPP 310
            PPP QP+P   QP+P P P   P      +Q QP+P + PPP
Sbjct: 1654 PPPQQPQPPPPQPQPAPQPP--PPQQQPQQQPQPQPQQPPPP 1693



 Score = 29.3 bits (64), Expect = 5.1
 Identities = 18/55 (32%), Positives = 24/55 (43%), Gaps = 18/55 (32%)

Query: 269  PPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRPLRRPPPGQAARWEFPGSRP 323
            PPPP P+    QP+P P               QP+P  +PPP Q    + P  +P
Sbjct: 1651 PPPPPPQ----QPQPPPP--------------QPQPAPQPPPPQQQPQQQPQPQP 1687


>gi|209862845 nuclear factor of activated T-cells, cytoplasmic,
           calcineurin-dependent 4 isoform 1 [Homo sapiens]
          Length = 964

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 33/109 (30%), Positives = 41/109 (37%), Gaps = 13/109 (11%)

Query: 190 FDGNSAMAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEASGLGAWGAR- 248
           F GNS+   P +S    GR     +G           L   +     +EA  LGA G   
Sbjct: 39  FPGNSSPGLPSSSSP--GRDLGAPAGSMGAASCEDEELEFKLVFGEEKEAPPLGAGGLGE 96

Query: 249 ----------CGRDPGSAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGP 287
                     C    G  P  GAAP+ +  PPPP+P      PRP P P
Sbjct: 97  ELDSEDAPPCCRLALGEPPPYGAAPIGIPRPPPPRPGMHSPPPRPAPSP 145


>gi|239757128 PREDICTED: similar to mCG141871 [Homo sapiens]
          Length = 306

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 46/129 (35%), Positives = 52/129 (40%), Gaps = 27/129 (20%)

Query: 212 PSSGGCRLPRRFSPRLRIPVWLQALQEASGLGAWGARCGRDPGSAPAAGAAPLTLCSPPP 271
           P S G   P RFS RLR PV+  ++Q    L    +RC R  G   A   APLT    PP
Sbjct: 143 PPSPGAARPARFSFRLR-PVFNASVQ---FLHCQLSRCRRLRGVRRA--PAPLT----PP 192

Query: 272 PQPRPVRGQPRPLPGPVNNPGSVNRLRQH--------------QPRPLRRPP---PGQAA 314
           P P P R  P+         GS   L                  PRP  RPP   PG+A 
Sbjct: 193 PPPPPSRCLPQDEACADTGSGSAEGLAADGPHLHTLTQPIVVTVPRPPPRPPKSVPGRAV 252

Query: 315 RWEFPGSRP 323
           R E P   P
Sbjct: 253 RPEPPAPAP 261



 Score = 33.9 bits (76), Expect = 0.21
 Identities = 40/127 (31%), Positives = 48/127 (37%), Gaps = 33/127 (25%)

Query: 220 PRRFSPRLRIP----VWLQALQEASGLGAWGA---RCGRDPGSAPAAGAA---------- 262
           PRR  P L +P    V++QA   A     WG    RC   P S PA G A          
Sbjct: 75  PRRAGP-LEVPADSRVFVQAAL-ARPSPRWGLALHRCSVTPSSRPAPGPALALLREGCPA 132

Query: 263 PLTLCSPPPPQPRPVRGQPRPLP---GPVNNP---------GSVNRLR--QHQPRPLRRP 308
             ++  PPPP P P   +P        PV N              RLR  +  P PL  P
Sbjct: 133 DTSVAFPPPPPPSPGAARPARFSFRLRPVFNASVQFLHCQLSRCRRLRGVRRAPAPLTPP 192

Query: 309 PPGQAAR 315
           PP   +R
Sbjct: 193 PPPPPSR 199


>gi|113428072 PREDICTED: similar to mCG141871 [Homo sapiens]
          Length = 358

 Score = 39.3 bits (90), Expect = 0.005
 Identities = 46/129 (35%), Positives = 52/129 (40%), Gaps = 27/129 (20%)

Query: 212 PSSGGCRLPRRFSPRLRIPVWLQALQEASGLGAWGARCGRDPGSAPAAGAAPLTLCSPPP 271
           P S G   P RFS RLR PV+  ++Q    L    +RC R  G   A   APLT    PP
Sbjct: 195 PPSPGAARPARFSFRLR-PVFNASVQ---FLHCQLSRCRRLRGVRRA--PAPLT----PP 244

Query: 272 PQPRPVRGQPRPLPGPVNNPGSVNRLRQH--------------QPRPLRRPP---PGQAA 314
           P P P R  P+         GS   L                  PRP  RPP   PG+A 
Sbjct: 245 PPPPPSRCLPQDEACADTGSGSAEGLAADGPHLHTLTQPIVVTVPRPPPRPPKSVPGRAV 304

Query: 315 RWEFPGSRP 323
           R E P   P
Sbjct: 305 RPEPPAPAP 313



 Score = 33.9 bits (76), Expect = 0.21
 Identities = 40/127 (31%), Positives = 48/127 (37%), Gaps = 33/127 (25%)

Query: 220 PRRFSPRLRIP----VWLQALQEASGLGAWGA---RCGRDPGSAPAAGAA---------- 262
           PRR  P L +P    V++QA   A     WG    RC   P S PA G A          
Sbjct: 127 PRRAGP-LEVPADSRVFVQAAL-ARPSPRWGLALHRCSVTPSSRPAPGPALALLREGCPA 184

Query: 263 PLTLCSPPPPQPRPVRGQPRPLP---GPVNNP---------GSVNRLR--QHQPRPLRRP 308
             ++  PPPP P P   +P        PV N              RLR  +  P PL  P
Sbjct: 185 DTSVAFPPPPPPSPGAARPARFSFRLRPVFNASVQFLHCQLSRCRRLRGVRRAPAPLTPP 244

Query: 309 PPGQAAR 315
           PP   +R
Sbjct: 245 PPPPPSR 251


>gi|114431236 zinc finger protein 462 [Homo sapiens]
          Length = 2506

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 269 PPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRPLRRPPPGQ 312
           PPPP P P   QP+PL  P   P  +    Q  P+P  +PPP Q
Sbjct: 545 PPPPPPPPPPSQPQPLQQP--QPPQLQPPHQVPPQPQTQPPPTQ 586



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 1/47 (2%)

Query: 269 PPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRPLRRP-PPGQAA 314
           PPPP P   +   +P P  +  P  V    Q QP P ++P PP QAA
Sbjct: 549 PPPPPPSQPQPLQQPQPPQLQPPHQVPPQPQTQPPPTQQPQPPTQAA 595


>gi|116256354 alpha 2 type IV collagen preproprotein [Homo sapiens]
          Length = 1712

 Score = 38.9 bits (89), Expect = 0.006
 Identities = 43/140 (30%), Positives = 49/140 (35%), Gaps = 27/140 (19%)

Query: 192  GNSAMAAPLASRGRYGRRRRPSS-------GGCRLPRRFSPRLRIPVWLQALQEASGL-G 243
            G   +  P  S+G  GR   P         G   LP    P LR    L  L    G  G
Sbjct: 1152 GFPGLTGPPGSQGELGRIGLPGGKGDDGWPGAPGLPG--FPGLRGIRGLHGLPGTKGFPG 1209

Query: 244  AWGARCGRDPGSAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPR 303
            + G+    DPG              P PP  R   G+   LPGPV  PG     +  Q  
Sbjct: 1210 SPGSDIHGDPGF-------------PGPPGERGDPGEANTLPGPVGVPGQ----KGDQGA 1252

Query: 304  PLRRPPPGQAARWEFPGSRP 323
            P  R PPG      FPG  P
Sbjct: 1253 PGERGPPGSPGLQGFPGITP 1272


>gi|13376335 hypothetical protein LOC79946 [Homo sapiens]
          Length = 257

 Score = 38.5 bits (88), Expect = 0.008
 Identities = 45/148 (30%), Positives = 56/148 (37%), Gaps = 38/148 (25%)

Query: 191 DGNSAMAAPLASRGRYGRR-------RRPSSGGCRLPRRFSPRLRIPVW--------LQA 235
           D + +  AP  +  R G R       RRP+    R  R  SP    P W         + 
Sbjct: 27  DKSGSAGAPSKNSSRLGGRPCMCTAGRRPNRASGRRRRSCSPA---PTWPPLCCYPQSRP 83

Query: 236 LQEASGLGAWGARCGRDPGSAPAAGAAPLTLCSPPPPQPRP-------VRGQPRPLPGPV 288
              A+G GA     GR  G+  A+ A        PP  PRP       +R  PRP  GP 
Sbjct: 84  TASAAGPGACMRASGRPHGNTTASTA--------PPRHPRPRRPGGPALRPTPRPCAGPA 135

Query: 289 NNPGSVN-RLRQHQPRPLRRPPPGQAAR 315
             P S + R R    RP R P  G+  R
Sbjct: 136 PPPASRDCRCR----RPRRWPRAGRRGR 159



 Score = 30.4 bits (67), Expect = 2.3
 Identities = 34/129 (26%), Positives = 44/129 (34%), Gaps = 17/129 (13%)

Query: 142 RPHQQPQHLGGCSSMSAPRRERTKPRSGRSADTEASAPCAGLLVRVLTFDGNSAMAAPLA 201
           RPH      G  ++ +AP R     R G  A      PCAG      + D          
Sbjct: 99  RPH------GNTTASTAPPRHPRPRRPGGPALRPTPRPCAGPAPPPASRDCRCRRPRRWP 152

Query: 202 SRGRYGRRR---RPSSGGCRLPRRFSPRLRIPVWLQALQEASGLGAWGARCGRDPGSAPA 258
             GR GRR    +PS  G     R +P              S  G+ GAR    P    A
Sbjct: 153 RAGRRGRRAGACKPSCAGAAWSARGAP--------LCSYRTSCAGSCGARTAPTPAPTCA 204

Query: 259 AGAAPLTLC 267
           + +A  + C
Sbjct: 205 SPSAAASSC 213


>gi|118402590 myosin XV [Homo sapiens]
          Length = 3530

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 42/120 (35%), Positives = 45/120 (37%), Gaps = 41/120 (34%)

Query: 247 ARCGRDPGSAPAAGAAPLTLC------SPPPPQPRPVRGQPRP----------LPGPVNN 290
           AR   D    PA   AP TL       SPP P PRP    P P          LP P + 
Sbjct: 635 ARSSNDARRPPAPQPAPRTLSHWSALLSPPVP-PRPPSSGPPPAPPLSPALSGLPRPASP 693

Query: 291 PGSVNRLRQHQP---RPLRRPPPGQAARW-----------------EFPGSRPG-RGSFR 329
            GS   LR+H P    P   PP  QA+ W                  FPG RP  RGS R
Sbjct: 694 YGS---LRRHPPPWAAPAHVPPAPQASWWAFVEPPAVSPEVPPDLLAFPGPRPSFRGSRR 750


>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo
           sapiens]
          Length = 1747

 Score = 38.1 bits (87), Expect = 0.011
 Identities = 27/72 (37%), Positives = 33/72 (45%), Gaps = 4/72 (5%)

Query: 255 SAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRPLRRP-PPGQA 313
           S P AG A  +  S P P P  V G P P PG    P S  R+R   P P   P PP + 
Sbjct: 422 SGPLAGRAGQSKISDPGPGPGGVGGAPLPPPGA---PRSCIRIRARFPAPPAPPAPPPRG 478

Query: 314 ARWEFPGSRPGR 325
            + +   + PGR
Sbjct: 479 PKRKLYSAVPGR 490



 Score = 33.1 bits (74), Expect = 0.35
 Identities = 36/125 (28%), Positives = 46/125 (36%), Gaps = 17/125 (13%)

Query: 194  SAMAAPLASRGRYGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEASGLGAWGARCGRDP 253
            SA  +P    G      RPS    R P   + R   PV   +L+   GLGA     GR  
Sbjct: 1563 SAQRSPGGPGGGASYSVRPSG---RYP--VARRAPSPVKPASLERVEGLGAGAGGAGRPF 1617

Query: 254  GSAPAAGAAPLTLCSPPPPQ----------PRPVRGQPRPLPGPVN--NPGSVNRLRQHQ 301
            G  P       +L  P  P+           R     P PLP P +   PG+    R  Q
Sbjct: 1618 GLTPPTILKSSSLSIPHEPKEVRFVVRSVSARSRSPSPSPLPSPASGPGPGAPGPRRPFQ 1677

Query: 302  PRPLR 306
             +PL+
Sbjct: 1678 QKPLQ 1682



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 8/60 (13%)

Query: 255 SAPAAGAAPLTLCSPPPPQPRPVRGQPRPLP----GPVNNPGSVNRLRQHQPRPLRRPPP 310
           SAP +G AP     PPP    P R + RP P     P  N G+ +       +P RR  P
Sbjct: 914 SAPESGDAP----RPPPAATPPERPKRRPRPPGPDSPYANLGAFSASLFAPSKPQRRKSP 969


>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a2 isoform a [Homo sapiens]
          Length = 1590

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 8/53 (15%)

Query: 252 DPGSAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRP 304
           DPG+ P  G +P      P P P P+ G   P PGP  +PGSV+ +    P P
Sbjct: 6   DPGAMPHPGPSP-----GPGPSPGPILG---PSPGPGPSPGSVHSMMGPSPGP 50



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 12/61 (19%)

Query: 250 GRDPGSAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPR--PLRR 307
           G  P  AP A A P     P P  P+P  GQP P          V +L+Q Q R  P+++
Sbjct: 284 GGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSP----------VLQLQQKQSRISPIQK 333

Query: 308 P 308
           P
Sbjct: 334 P 334


>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a2 isoform b [Homo sapiens]
          Length = 1572

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 8/53 (15%)

Query: 252 DPGSAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRP 304
           DPG+ P  G +P      P P P P+ G   P PGP  +PGSV+ +    P P
Sbjct: 6   DPGAMPHPGPSP-----GPGPSPGPILG---PSPGPGPSPGSVHSMMGPSPGP 50



 Score = 34.3 bits (77), Expect = 0.16
 Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 12/61 (19%)

Query: 250 GRDPGSAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPR--PLRR 307
           G  P  AP A A P     P P  P+P  GQP P          V +L+Q Q R  P+++
Sbjct: 284 GGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSP----------VLQLQQKQSRISPIQK 333

Query: 308 P 308
           P
Sbjct: 334 P 334


>gi|14249464 zinc finger and BTB domain containing 45 [Homo sapiens]
          Length = 511

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 28/76 (36%), Positives = 37/76 (48%), Gaps = 7/76 (9%)

Query: 251 RDPG-SAPAAGAAPLTLCSPPPPQPRPVRGQPRPLPG--PVNNPGSVNRLRQHQPRPLRR 307
           R PG SAP     PL    PPP  P  +R + R L    P  +PG+ +  +Q QP  L+ 
Sbjct: 126 RAPGTSAPT----PLPTPVPPPLAPAQLRHRLRHLLAARPPGHPGAAHSRKQRQPARLQL 181

Query: 308 PPPGQAARWEFPGSRP 323
           P P   A+ E P + P
Sbjct: 182 PAPPTPAKAEGPDADP 197


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 37.7 bits (86), Expect = 0.014
 Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 5/110 (4%)

Query: 202 SRGR-YGRRRRPSSGGCRLPRRFSPRLRIPVWLQALQEASGLGAWGARCGRDPGSAPAAG 260
           SR R Y  RRRPS      PRR +P  R+P   +  +  S +     R  R   S   + 
Sbjct: 304 SRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPV----RRRRRSSASLSGSS 359

Query: 261 AAPLTLCSPPPPQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRPLRRPPP 310
           ++  +  S  PP+  P R    P      +P +    R+H+P P   PPP
Sbjct: 360 SSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPP 409



 Score = 32.0 bits (71), Expect = 0.78
 Identities = 56/229 (24%), Positives = 78/229 (34%), Gaps = 29/229 (12%)

Query: 106 KQVEVEEDDCHQPEEDSDEHHPAIGRIQVVRGVRNQRPHQQPQHLGGCSSMSAPRRERTK 165
           ++VE+ E      EED      A   +Q  R  R Q   Q     G  SS    R +R+ 
Sbjct: 458 RKVELSES-----EEDKGGKMAAADSVQQRRQYRRQN-QQSSSDSGSSSSSEDERPKRSH 511

Query: 166 PRSGRSADTEASAPCAGLLVRVLTFDGNSAMAAP------LASRGRYGRRRRPSSGGCRL 219
            ++G        +P              SA  +P       + RGR  RRR PS    R 
Sbjct: 512 VKNGEVGRRRRHSP------------SRSASPSPRKRQKETSPRGR--RRRSPSPPPTR- 556

Query: 220 PRRFSPRLRIPVWLQALQEASGLGAWGARCGRDPGSAPAAGAAPLTLCSPPPPQPRPVRG 279
            RR SP    P   +            +   R    +P   + P+     P P P+    
Sbjct: 557 -RRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPKRRTA 615

Query: 280 QPRPLPGPVNNPGSVNRLR-QHQPRPLRRPPPGQAARWEFPGSRPGRGS 327
            P P P    +P    + R  H P P +R  P    R     S+  +GS
Sbjct: 616 SPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKHRKGS 664



 Score = 28.9 bits (63), Expect = 6.6
 Identities = 20/60 (33%), Positives = 24/60 (40%), Gaps = 7/60 (11%)

Query: 254 GSAPAAGAAPLTLCSPPP-----PQPRPVRGQPRPLPGPVNNPGSVNRLRQHQPRPLRRP 308
           GS+P+         SP P     P PRP   Q    P PV    S +  R+  P P  RP
Sbjct: 663 GSSPSRSTREAR--SPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRP 720


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.134    0.424 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,051,571
Number of Sequences: 37866
Number of extensions: 1225139
Number of successful extensions: 12040
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 744
Number of HSP's that attempted gapping in prelim test: 8871
Number of HSP's gapped (non-prelim): 3132
length of query: 330
length of database: 18,247,518
effective HSP length: 103
effective length of query: 227
effective length of database: 14,347,320
effective search space: 3256841640
effective search space used: 3256841640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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