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Search of human proteins with 239750939
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750939 PREDICTED: hypothetical protein XP_002347609 [Homo
sapiens]
(158 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239756425 PREDICTED: hypothetical protein [Homo sapiens] 313 4e-86
gi|239750939 PREDICTED: hypothetical protein XP_002347609 [Homo ... 313 4e-86
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 42 3e-04
gi|151301154 mucin 6, gastric [Homo sapiens] 37 0.009
gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens] 35 0.027
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 35 0.035
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens] 34 0.045
gi|239744133 PREDICTED: hypothetical protein [Homo sapiens] 34 0.059
gi|161019170 mucin 5AC [Homo sapiens] 33 0.077
gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens] 33 0.077
gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens] 33 0.077
gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens] 33 0.077
gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens] 33 0.077
gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo sap... 33 0.13
gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens] 32 0.23
gi|239752529 PREDICTED: similar to mucin [Homo sapiens] 32 0.23
gi|28373194 adhesion regulating molecule 1 precursor [Homo sapiens] 32 0.29
gi|28373192 adhesion regulating molecule 1 precursor [Homo sapiens] 32 0.29
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 31 0.38
gi|109638745 transforming growth factor beta 1 induced transcrip... 31 0.38
gi|21361591 transforming growth factor beta 1 induced transcript... 31 0.38
gi|239508973 PREDICTED: similar to Mucin-3A [Homo sapiens] 31 0.50
gi|58331120 hypothetical protein LOC29058 isoform 1 [Homo sapiens] 31 0.50
gi|224451082 cytospin A [Homo sapiens] 30 0.66
gi|224451080 cytospin A [Homo sapiens] 30 0.66
gi|191252814 RIMS binding protein 3B [Homo sapiens] 30 0.66
gi|191252806 RIMS binding protein 3C [Homo sapiens] 30 0.66
gi|222418647 mucin 7, secreted precursor [Homo sapiens] 30 0.66
gi|169168434 PREDICTED: hypothetical protein [Homo sapiens] 30 0.66
gi|113417342 PREDICTED: hypothetical protein [Homo sapiens] 30 0.66
>gi|239756425 PREDICTED: hypothetical protein [Homo sapiens]
Length = 158
Score = 313 bits (802), Expect = 4e-86
Identities = 158/158 (100%), Positives = 158/158 (100%)
Query: 1 MYSSRVAQRLKRMPAAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSR 60
MYSSRVAQRLKRMPAAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSR
Sbjct: 1 MYSSRVAQRLKRMPAAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSR 60
Query: 61 SNRSASTVCETLTSATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSS 120
SNRSASTVCETLTSATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSS
Sbjct: 61 SNRSASTVCETLTSATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSS 120
Query: 121 CPMTSTSCCRGSLEEMPFMEVWNSWGILISFSMTVGSA 158
CPMTSTSCCRGSLEEMPFMEVWNSWGILISFSMTVGSA
Sbjct: 121 CPMTSTSCCRGSLEEMPFMEVWNSWGILISFSMTVGSA 158
>gi|239750939 PREDICTED: hypothetical protein XP_002347609 [Homo
sapiens]
Length = 158
Score = 313 bits (802), Expect = 4e-86
Identities = 158/158 (100%), Positives = 158/158 (100%)
Query: 1 MYSSRVAQRLKRMPAAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSR 60
MYSSRVAQRLKRMPAAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSR
Sbjct: 1 MYSSRVAQRLKRMPAAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSR 60
Query: 61 SNRSASTVCETLTSATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSS 120
SNRSASTVCETLTSATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSS
Sbjct: 61 SNRSASTVCETLTSATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSS 120
Query: 121 CPMTSTSCCRGSLEEMPFMEVWNSWGILISFSMTVGSA 158
CPMTSTSCCRGSLEEMPFMEVWNSWGILISFSMTVGSA
Sbjct: 121 CPMTSTSCCRGSLEEMPFMEVWNSWGILISFSMTVGSA 158
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 41.6 bits (96), Expect = 3e-04
Identities = 36/137 (26%), Positives = 56/137 (40%), Gaps = 10/137 (7%)
Query: 16 AGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSA 75
+G++ PSS +PG + + TT S++ SS +S + S +T T+T+
Sbjct: 4636 SGSTVTPSS--IPGTTHTARVLTTTTTTVATGSMATPSSSTQTSGTPPSLTTTATTITAT 4693
Query: 76 TRVTELPPAPWT-----FLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTSTSCCR 130
T P T LTST T P +A SSS R+ T+T
Sbjct: 4694 GSTTNPSSTPGTTPITPVLTSTATTPAATSS---KATSSSSPRTATTLPVLTSTATKSTA 4750
Query: 131 GSLEEMPFMEVWNSWGI 147
S +P +W +W +
Sbjct: 4751 TSFTPIPSSTLWTTWTV 4767
Score = 33.5 bits (75), Expect = 0.077
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 15 AAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTS 74
+ G++A PSS+ PG + S T TA SS +SS S R+A+T+ ++
Sbjct: 4265 STGSTATPSST--PGTAPPPKVLTSPATTPTA-----TSSKATSSSSPRTATTLPVLTST 4317
Query: 75 ATR--VTELPPAPWTFLTSTETLP 96
AT+ T + P P + L +T TLP
Sbjct: 4318 ATKSTATSVTPIPSSTLGTTGTLP 4341
Score = 33.5 bits (75), Expect = 0.077
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 12/117 (10%)
Query: 15 AAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTS 74
A G++ PSS+ PG ++ STA + + SS +SS S R+A+T+ ++
Sbjct: 4692 ATGSTTNPSST--PGT-----TPITPVLTSTATTPAATSSKATSSSSPRTATTLPVLTST 4744
Query: 75 ATR--VTELPPAPWTFLTSTETLPG---PPCPSLVRADSSSLMRSGRVSSSCPMTST 126
AT+ T P P + L +T T+P P ++ +SS + S+ T+T
Sbjct: 4745 ATKSTATSFTPIPSSTLWTTWTVPAQTTTPMSTMSTIHTSSTPETTHTSTVLTTTAT 4801
Score = 31.2 bits (69), Expect = 0.38
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 17 GASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSAT 76
G++A PSS+ PG + S T TA SS +SS S R+A+T+ ++AT
Sbjct: 3010 GSTAIPSST--PGTAPPPKVLTSTATTPTA-----TSSKATSSSSPRTATTLPVLTSTAT 3062
Query: 77 R--VTELPPAPWTFLTSTETLP 96
+ T P P L +T TLP
Sbjct: 3063 KSTATSFTPIPSFTLGTTGTLP 3084
Score = 28.9 bits (63), Expect = 1.9
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 15 AAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTS 74
A G +A PSS+ PG L L+ T +TA + S A+ S+ +T T S
Sbjct: 4407 ATGPTATPSST--PGTTW-ILTELTTTATTTASTGSTATP------SSTPGTTWILTEPS 4457
Query: 75 ATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTSTS 127
T +P +ST+ G P S A + ++ S SS P T+T+
Sbjct: 4458 TTATVTVPTGSTATASSTQATAGTPHVS-TTATTPTVTSSKATPSSSPGTATA 4509
Score = 27.7 bits (60), Expect = 4.3
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 18 ASAPPSSS--GLPGAGL-RCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTS 74
A+ P ++S +P + L RLS+TT TA +++++ SS+ STV T T+
Sbjct: 3232 ATTPTATSVTAIPSSSLGTAWTRLSQTTTPTA---TMSTATPSSTPETVHTSTVLTTTTT 3288
Query: 75 ATRVT 79
TR T
Sbjct: 3289 TTRAT 3293
Score = 27.3 bits (59), Expect = 5.6
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 15 AAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTS 74
+ G++A P+S+ + L TT +T +++ + + SSS +A + +
Sbjct: 1922 STGSTATPTSTLRTAPPPKVL-----TTTATTPTVTSSKATPSSSPGTATALPALRSTAT 1976
Query: 75 ATRVTELPPAP-------WTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTSTS 127
T + P P WT L+ T T P ++ A SS + S+ T+T+
Sbjct: 1977 TPTATSVTPIPSSSLGTTWTRLSQTTT----PTATMSTATPSSTPETAHTSTVLTATATT 2032
Score = 26.6 bits (57), Expect = 9.5
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 18 ASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATR 77
+ A PSSS L L + T +T+F+ +SSL + R + T T T +T
Sbjct: 4496 SKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSL--GTTWTRLSQTTTPTATMSTA 4553
Query: 78 VTELPPA---PWTFLTSTETLPG 97
P T LT+T T G
Sbjct: 4554 TPSSTPETVHTSTVLTATATTTG 4576
>gi|151301154 mucin 6, gastric [Homo sapiens]
Length = 2439
Score = 36.6 bits (83), Expect = 0.009
Identities = 29/90 (32%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 41 TTDSTAFSISLASSLLSSSRSNRSASTVCETLTSA-----TRVTELPPAPWTFLTSTETL 95
+T T S A + S S ++RS S TS + VT +P +P T LT+
Sbjct: 2250 STPRTTASTHTAPAFSSQSTTSRSTSLTTRVPTSGFVSLTSGVTGIPTSPVTNLTTRH-- 2307
Query: 96 PGPPCPSLVRADSSSLMRSGRVSSSCPMTS 125
PGP R +SSL G +S P++S
Sbjct: 2308 PGPTLSPTTRFLTSSLTAHGSTPASAPVSS 2337
Score = 27.3 bits (59), Expect = 5.6
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 4/109 (3%)
Query: 19 SAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATRV 78
+APP + G + S T S++F IS +S L +S S +S + L +
Sbjct: 2060 TAPPMTVTTSGTS-QTHSSFSTATASSSF-ISSSSWLPQNSSSRPPSSPITTQLPHLSSA 2117
Query: 79 TELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTSTS 127
T P T S+ P P PS V + S S + SS TS+S
Sbjct: 2118 TT--PVSTTNQLSSSFSPSPSAPSTVSSYVPSSHSSPQTSSPSVGTSSS 2164
>gi|169202626 PREDICTED: similar to mucin 5, partial [Homo sapiens]
Length = 2013
Score = 35.0 bits (79), Expect = 0.027
Identities = 30/97 (30%), Positives = 44/97 (45%), Gaps = 3/97 (3%)
Query: 39 SRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATRVTELPPAPWTFLTS--TETLP 96
+RTT + + AS ++S + S V T T + T + AP T TS T +
Sbjct: 1909 ARTTSAPTTRTTSASPASTTSGPGNTPSPVPTTSTISAPTTSITSAPTTSTTSAPTSSTT 1968
Query: 97 GPPCPSLVRADSSSLMRSGRVSS-SCPMTSTSCCRGS 132
P S A +SS S + S+ S P TST+ G+
Sbjct: 1969 SAPTTSTTSAPTSSTTSSPQTSTTSAPTTSTTSGPGT 2005
Score = 29.3 bits (64), Expect = 1.5
Identities = 31/115 (26%), Positives = 48/115 (41%), Gaps = 7/115 (6%)
Query: 18 ASAPPSSSGLPGAGLRCLLRLSRTTD---STAFSISLASSLLSSSRSNRSASTVCETLTS 74
A + PS + + SRTT ++ S S+ + + S SA T T
Sbjct: 1856 APSTPSGRAISPTQSTSSWQKSRTTTLVTTSTTSTPQTSTTYAHTTSTTSAPTARTTSAP 1915
Query: 75 ATRVTELPPAPWTFLTSTETLPGP-PCPSLVRADSSSLMRSGRVS-SSCPMTSTS 127
TR T PA T + P P P S + A ++S+ + S +S P +ST+
Sbjct: 1916 TTRTTSASPASTT--SGPGNTPSPVPTTSTISAPTTSITSAPTTSTTSAPTSSTT 1968
Score = 26.6 bits (57), Expect = 9.5
Identities = 26/108 (24%), Positives = 46/108 (42%), Gaps = 6/108 (5%)
Query: 41 TTDSTAFSISLASSLLSSSRSNRSA--STVCETLTSATRVTELPPAPWTFLTSTETLPGP 98
T+ S A + +S + +R++ S+ S+ T++ +T T P T + T + P P
Sbjct: 1483 TSSSPAQTTPPTTSKTTETRASGSSAPSSTPGTVSLSTARTTPAPGTATSVKKTFSTPSP 1542
Query: 99 -PCPSLVRADSSSLMRSGRVSSSCPMTSTSCCRGSLEEMPFMEVWNSW 145
P P+ + S+ V SS P + L+E+ W W
Sbjct: 1543 PPVPATSTSSMSTTTPGTSVVSSKPTLTEPSTSSCLQELC---TWTEW 1587
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 34.7 bits (78), Expect = 0.035
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 13/132 (9%)
Query: 13 MPAAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETL 72
+P + PP+S+G L+ ++ S++ S S +SS SSS S+ S+S+ +
Sbjct: 2501 VPHSDVGEPPASTGAQQPSALAALQPAKERRSSS-SSSSSSSSSSSSSSSSSSSSSSGSS 2559
Query: 73 TSATRVTELP------------PAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSS 120
+S + + LP P P E P P P+ + SSS S SSS
Sbjct: 2560 SSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSS 2619
Query: 121 CPMTSTSCCRGS 132
+S+S S
Sbjct: 2620 SSSSSSSSSSSS 2631
Score = 29.3 bits (64), Expect = 1.5
Identities = 20/65 (30%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 37 RLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATRVTELPPAPWTFLTSTETLP 96
R R++ S++ S S +SS SSS S+ S+S+ + +S++ + P+P + LP
Sbjct: 2603 RKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSP--AKPGPQALP 2660
Query: 97 GPPCP 101
P P
Sbjct: 2661 KPASP 2665
>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 34.3 bits (77), Expect = 0.045
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 34 CLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATRVTELPPAPWTFLT--- 90
C + SRT+ + S SS S +S+R++ST C +S T T T T
Sbjct: 98 CSWQFSRTSSTCCCQSSRTSSTSCSCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSSTSCS 157
Query: 91 --STETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTST 126
S+ T C S + +S +S R SS+C S+
Sbjct: 158 YQSSRTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSS 195
>gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]
Length = 375
Score = 33.9 bits (76), Expect = 0.059
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 5/98 (5%)
Query: 34 CLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATRVTELPPAPWTFLT--- 90
C + SRT+ + S SS S +S+R++ST C +S T T T T
Sbjct: 98 CSWQFSRTSSTCRCQSSRTSSTSCSCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSSTSCS 157
Query: 91 --STETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTST 126
S+ T C S + +S +S R SS+C S+
Sbjct: 158 YQSSRTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSS 195
Score = 31.2 bits (69), Expect = 0.38
Identities = 36/131 (27%), Positives = 55/131 (41%), Gaps = 25/131 (19%)
Query: 3 SSRVAQRLKRMPAAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSN 62
SSR + ++G S+ S + C + SRT+ + + S SS S +S+
Sbjct: 263 SSRTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSSRTSSTCSCQFSRTSSTSCSCQSS 322
Query: 63 RSASTVCETLTSATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSCP 122
R++ST C +S T T W+ + +SS SGR S +
Sbjct: 323 RTSST-CSCQSSGTSSTSC--ICWS------------------SGTSSTSCSGRFSGT-- 359
Query: 123 MTSTSC-CRGS 132
+STSC CR S
Sbjct: 360 -SSTSCNCRSS 369
Score = 30.8 bits (68), Expect = 0.50
Identities = 32/121 (26%), Positives = 50/121 (41%), Gaps = 10/121 (8%)
Query: 15 AAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTS 74
++G S+ S C + SRT+ ++ S +S S +S+ ++ST C +S
Sbjct: 240 SSGTSSTSCSWQSSRTSSTCSCQSSRTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSS 299
Query: 75 ATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSC----PMTSTSCCR 130
T T T TS C S + + S SG S+SC TS++ C
Sbjct: 300 RTSSTCSCQFSRTSSTSCS------CQSSRTSSTCSCQSSGTSSTSCICWSSGTSSTSCS 353
Query: 131 G 131
G
Sbjct: 354 G 354
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 33.5 bits (75), Expect = 0.077
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 15 AAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTS 74
+ G++A PSS+ PG + S T TA SS +SS S R+A+T+ ++
Sbjct: 4735 STGSTATPSST--PGTAPPPKVLTSPATTPTA-----TSSKATSSSSPRTATTLPVLTST 4787
Query: 75 ATR--VTELPPAPWTFLTSTETLP 96
AT+ T + P P + L +T TLP
Sbjct: 4788 ATKSTATSVTPIPSSTLGTTGTLP 4811
Score = 31.2 bits (69), Expect = 0.38
Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 9/82 (10%)
Query: 17 GASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSAT 76
G++A PSS+ PG + S T TA SS +SS S R+A+T+ ++AT
Sbjct: 3590 GSTAIPSST--PGTAPPPKVLTSTATTPTA-----TSSKATSSSSPRTATTLPVLTSTAT 3642
Query: 77 R--VTELPPAPWTFLTSTETLP 96
+ T P P L +T TLP
Sbjct: 3643 KSTATSFTPIPSFTLGTTGTLP 3664
Score = 28.9 bits (63), Expect = 1.9
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 10/113 (8%)
Query: 15 AAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTS 74
A G +A PSS+ PG L L+ T +TA + S A+ S+ +T T S
Sbjct: 4877 ATGPTATPSST--PGTTW-ILTELTTTATTTASTGSTATP------SSTPGTTWILTEPS 4927
Query: 75 ATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTSTS 127
T +P +ST+ G P S A + ++ S SS P T+T+
Sbjct: 4928 TTATVTVPTGSTATASSTQATAGTPHVS-TTATTPTVTSSKATPSSSPGTATA 4979
Score = 27.7 bits (60), Expect = 4.3
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 6/65 (9%)
Query: 18 ASAPPSSS--GLPGAGL-RCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTS 74
A+ P ++S +P + L RLS+TT TA +++++ SS+ STV T T+
Sbjct: 3812 ATTPTATSVTAIPSSSLGTAWTRLSQTTTPTA---TMSTATPSSTPETVHTSTVLTTTTT 3868
Query: 75 ATRVT 79
TR T
Sbjct: 3869 TTRAT 3873
Score = 27.3 bits (59), Expect = 5.6
Identities = 27/120 (22%), Positives = 50/120 (41%), Gaps = 16/120 (13%)
Query: 15 AAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTS 74
+ G++A P+S+ + L TT +T +++ + + SSS +A + +
Sbjct: 2612 STGSTATPTSTLRTAPPPKVL-----TTTATTPTVTSSKATPSSSPGTATALPALRSTAT 2666
Query: 75 ATRVTELPPAP-------WTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTSTS 127
T + P P WT L+ T T P ++ A SS + S+ T+T+
Sbjct: 2667 TPTATSVTPIPSSSLGTTWTRLSQTTT----PTATMSTATPSSTPETAHTSTVLTATATT 2722
Score = 26.6 bits (57), Expect = 9.5
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 5/83 (6%)
Query: 18 ASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATR 77
+ A PSSS L L + T +T+F+ +SSL + R + T T T +T
Sbjct: 4966 SKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSL--GTTWTRLSQTTTPTATMSTA 5023
Query: 78 VTELPPA---PWTFLTSTETLPG 97
P T LT+T T G
Sbjct: 5024 TPSSTPETVHTSTVLTATATTTG 5046
>gi|239755545 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2852
Score = 33.5 bits (75), Expect = 0.077
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 17/125 (13%)
Query: 16 AGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLAS---SLLSSSRSNRSASTVCETL 72
AG + P+S G+ + LL + T +S++ ++L + ++S + + +
Sbjct: 1482 AGPTESPASKGVTAS----LLAIPHTPESSSLPVALQTPTPGMVSGAMETTRVTVIFAGS 1537
Query: 73 TSATRVTELPPAP-WTFLTSTETLPG---------PPCPSLVRADSSSLMRSGRVSSSCP 122
+ T + PPAP + +T T+ G PP PSL + SS + S S P
Sbjct: 1538 PNITVSSRSPPAPRFPLMTKAVTVRGHGSLPVRTTPPQPSLTASPSSRPVASPGAISRSP 1597
Query: 123 MTSTS 127
+S S
Sbjct: 1598 TSSGS 1602
>gi|239755543 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2924
Score = 33.5 bits (75), Expect = 0.077
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 17/125 (13%)
Query: 16 AGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLAS---SLLSSSRSNRSASTVCETL 72
AG + P+S G+ + LL + T +S++ ++L + ++S + + +
Sbjct: 1554 AGPTESPASKGVTAS----LLAIPHTPESSSLPVALQTPTPGMVSGAMETTRVTVIFAGS 1609
Query: 73 TSATRVTELPPAP-WTFLTSTETLPG---------PPCPSLVRADSSSLMRSGRVSSSCP 122
+ T + PPAP + +T T+ G PP PSL + SS + S S P
Sbjct: 1610 PNITVSSRSPPAPRFPLMTKAVTVRGHGSLPVRTTPPQPSLTASPSSRPVASPGAISRSP 1669
Query: 123 MTSTS 127
+S S
Sbjct: 1670 TSSGS 1674
>gi|239744300 PREDICTED: otogelin isoform 2 [Homo sapiens]
Length = 2852
Score = 33.5 bits (75), Expect = 0.077
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 17/125 (13%)
Query: 16 AGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLAS---SLLSSSRSNRSASTVCETL 72
AG + P+S G+ + LL + T +S++ ++L + ++S + + +
Sbjct: 1482 AGPTESPASKGVTAS----LLAIPHTPESSSLPVALQTPTPGMVSGAMETTRVTVIFAGS 1537
Query: 73 TSATRVTELPPAP-WTFLTSTETLPG---------PPCPSLVRADSSSLMRSGRVSSSCP 122
+ T + PPAP + +T T+ G PP PSL + SS + S S P
Sbjct: 1538 PNITVSSRSPPAPRFPLMTKAVTVRGHGSLPVRTTPPQPSLTASPSSRPVASPGAISRSP 1597
Query: 123 MTSTS 127
+S S
Sbjct: 1598 TSSGS 1602
>gi|239744298 PREDICTED: otogelin isoform 1 [Homo sapiens]
Length = 2924
Score = 33.5 bits (75), Expect = 0.077
Identities = 31/125 (24%), Positives = 55/125 (44%), Gaps = 17/125 (13%)
Query: 16 AGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLAS---SLLSSSRSNRSASTVCETL 72
AG + P+S G+ + LL + T +S++ ++L + ++S + + +
Sbjct: 1554 AGPTESPASKGVTAS----LLAIPHTPESSSLPVALQTPTPGMVSGAMETTRVTVIFAGS 1609
Query: 73 TSATRVTELPPAP-WTFLTSTETLPG---------PPCPSLVRADSSSLMRSGRVSSSCP 122
+ T + PPAP + +T T+ G PP PSL + SS + S S P
Sbjct: 1610 PNITVSSRSPPAPRFPLMTKAVTVRGHGSLPVRTTPPQPSLTASPSSRPVASPGAISRSP 1669
Query: 123 MTSTS 127
+S S
Sbjct: 1670 TSSGS 1674
>gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo
sapiens]
Length = 1064
Score = 32.7 bits (73), Expect = 0.13
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 49 ISLASSLLSSSRSNRSASTVCETL-TSATRVTELPPAPWTFLTSTETLP 96
++ + S S N S+S + T+ TS T ++ LPP T +TST +P
Sbjct: 385 VTTTTETTSQSSLNFSSSAIYSTVSTSTTAISSLPPTSGTMVTSTNIVP 433
Score = 28.9 bits (63), Expect = 1.9
Identities = 22/73 (30%), Positives = 32/73 (43%), Gaps = 6/73 (8%)
Query: 21 PPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATRVTE 80
P +S PG + L+ + T S +L SSL+SS+ S S A +V
Sbjct: 57 PQLASPAPGHRENAPMTLTTSPHDTLISETLLSSLVSSNTSTTPTSKF------AFKVET 110
Query: 81 LPPAPWTFLTSTE 93
PP +L +TE
Sbjct: 111 TPPTVLVYLATTE 123
>gi|239758058 PREDICTED: similar to mucin, partial [Homo sapiens]
Length = 967
Score = 32.0 bits (71), Expect = 0.23
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 38 LSRTTDSTAFS-ISLASSLLSSSRSNRSASTVCETLTSATRVTELPPAPWTFLTSTETLP 96
L TT+ST+ S +S S + ++ ++ S + ++ + + PP+ + +T+TET
Sbjct: 296 LITTTESTSHSPLSFTSVITTTESTSHSTPSFTSSIATTETTSHTPPSFTSLITTTET-- 353
Query: 97 GPPCPSLVRADSSSLMRSGRVSSSCPMTSTS 127
PS +SL+ + +S P + TS
Sbjct: 354 ----PSHSNPSFTSLITATESTSHSPPSFTS 380
Score = 30.4 bits (67), Expect = 0.66
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 17/100 (17%)
Query: 39 SRTTDSTAFSISLASSLLSSSRSNRSASTVCET-----------LTSATRVTELPPAPWT 87
S +T S FSI+ ++ S+ S SA T ET +T++ + PP +
Sbjct: 715 SHSTPSFPFSITTTETIPHSTPSLNSAITTTETMSHSIPGFASSITTSETTSPFPPRFTS 774
Query: 88 FLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTSTS 127
+T+T+T P PS ++ + S +S P++ TS
Sbjct: 775 LITTTKTTSHSP-PSF-----TASLTSTEATSHSPLSFTS 808
Score = 30.0 bits (66), Expect = 0.86
Identities = 21/84 (25%), Positives = 39/84 (46%), Gaps = 7/84 (8%)
Query: 20 APPS------SSGLPGAGLRCLLRLSRTTDSTAFSI-SLASSLLSSSRSNRSASTVCETL 72
+PPS ++G+ L TTDST+ S S SS+ S+ + S + +
Sbjct: 374 SPPSFTSAIATTGITSHSTPIFTSLIATTDSTSHSTPSFTSSITSTETISHSTPSFSSLI 433
Query: 73 TSATRVTELPPAPWTFLTSTETLP 96
T+ + P+ + +T+T++ P
Sbjct: 434 TATKTTSHSTPSLTSLITTTKSTP 457
Score = 26.9 bits (58), Expect = 7.3
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 41 TTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATRVTELPPAPWTF-LTSTETLPGPP 99
TT++ + S + +S +++ + ++ +L + T T L P +TF +++TET P
Sbjct: 214 TTETRSHSPPIFTSSITTIETTSHSTPSFTSLMTTTETTSLSPPAFTFSISTTETNSHSP 273
Query: 100 -----------CPSLVRADSSSLMRSGRVSSSCPMTSTS 127
PS +SL+ + +S P++ TS
Sbjct: 274 PSFTSSIATTETPSHSPPSFTSLITTTESTSHSPLSFTS 312
>gi|239752529 PREDICTED: similar to mucin [Homo sapiens]
Length = 594
Score = 32.0 bits (71), Expect = 0.23
Identities = 23/91 (25%), Positives = 45/91 (49%), Gaps = 7/91 (7%)
Query: 38 LSRTTDSTAFS-ISLASSLLSSSRSNRSASTVCETLTSATRVTELPPAPWTFLTSTETLP 96
L TT+ST+ S +S S + ++ ++ S + ++ + + PP+ + +T+TET
Sbjct: 125 LITTTESTSHSPLSFTSVITTTESTSHSTPSFTSSIATTETTSHTPPSFTSLITTTET-- 182
Query: 97 GPPCPSLVRADSSSLMRSGRVSSSCPMTSTS 127
PS +SL+ + +S P + TS
Sbjct: 183 ----PSHSNPSFTSLITATESTSHSPPSFTS 209
Score = 29.6 bits (65), Expect = 1.1
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 7/87 (8%)
Query: 20 APPS------SSGLPGAGLRCLLRLSRTTDSTAFSI-SLASSLLSSSRSNRSASTVCETL 72
+PPS ++G+ L TTDST+ S S SS+ S+ + S + +
Sbjct: 203 SPPSFTSAIATTGITSHSTPIFTSLIATTDSTSHSTPSFTSSITSTETISHSTPSFSSLI 262
Query: 73 TSATRVTELPPAPWTFLTSTETLPGPP 99
T+ + P+ + +T+T T P
Sbjct: 263 TATKTTSHSTPSLTSLITTTNTSHSTP 289
Score = 29.3 bits (64), Expect = 1.5
Identities = 20/89 (22%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 41 TTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATRVTELPPAPWTFLTSTETL--PGP 98
+T++ + S SSL++++++ ++ +L + T + P+ + +TSTET P
Sbjct: 247 STETISHSTPSFSSLITATKTTSHSTPSLTSLITTTNTSHSTPSLTSLVTSTETASHSTP 306
Query: 99 PCPSLVRADSSSLMRSGRVSSSCPMTSTS 127
SL+ ++ + ++SS T T+
Sbjct: 307 SFTSLITTIEATSHSTPSLTSSITTTGTT 335
Score = 27.7 bits (60), Expect = 4.3
Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 3/90 (3%)
Query: 41 TTDSTAFSI-SLASSLLSSSRSNRSASTVCETLTSATRVTELPPAPWTFLTSTETL--PG 97
TT S + S SL S++ ++ + S +T+ + LPP + +T+T+T
Sbjct: 411 TTQSASHSTPSLTSAISTTEAMSHSIPVFTSLITTTETTSHLPPRFTSLITTTKTTSHSP 470
Query: 98 PPCPSLVRADSSSLMRSGRVSSSCPMTSTS 127
P +L+ + ++ + +SS T T+
Sbjct: 471 PSFTALITSTKTTSHSTPSFTSSIATTETT 500
Score = 26.9 bits (58), Expect = 7.3
Identities = 23/99 (23%), Positives = 46/99 (46%), Gaps = 12/99 (12%)
Query: 41 TTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATRVTELPPAPWTF-LTSTETLPGPP 99
TT++ + S + +S +++ + ++ +L + T T L P +TF +++TET P
Sbjct: 43 TTETRSHSPPIFTSSITTIETTSHSTPSFTSLMTTTETTSLSPPAFTFSISTTETNSHSP 102
Query: 100 -----------CPSLVRADSSSLMRSGRVSSSCPMTSTS 127
PS +SL+ + +S P++ TS
Sbjct: 103 PSFTSSIATTETPSHSPPSFTSLITTTESTSHSPLSFTS 141
>gi|28373194 adhesion regulating molecule 1 precursor [Homo sapiens]
Length = 407
Score = 31.6 bits (70), Expect = 0.29
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 7 AQRLKRMPAAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSAS 66
+Q ++ + AG L G GL LL S S++ SSS ++SA+
Sbjct: 166 SQLMQLIGPAGLGGLGGLGALTGPGLASLLGSSGPPGSSS----------SSSSRSQSAA 215
Query: 67 TVCETLTSATRVTELPPAPWTFLTSTETLPGP 98
+ TS+TR T P AP ++ T P P
Sbjct: 216 VTPSSTTSSTRATPAPSAP---AAASATSPSP 244
>gi|28373192 adhesion regulating molecule 1 precursor [Homo sapiens]
Length = 407
Score = 31.6 bits (70), Expect = 0.29
Identities = 27/92 (29%), Positives = 40/92 (43%), Gaps = 13/92 (14%)
Query: 7 AQRLKRMPAAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSAS 66
+Q ++ + AG L G GL LL S S++ SSS ++SA+
Sbjct: 166 SQLMQLIGPAGLGGLGGLGALTGPGLASLLGSSGPPGSSS----------SSSSRSQSAA 215
Query: 67 TVCETLTSATRVTELPPAPWTFLTSTETLPGP 98
+ TS+TR T P AP ++ T P P
Sbjct: 216 VTPSSTTSSTRATPAPSAP---AAASATSPSP 244
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 31.2 bits (69), Expect = 0.38
Identities = 23/82 (28%), Positives = 41/82 (50%)
Query: 15 AAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTS 74
++ +S+ SSS + S ++ S++ S S +SS SSS S+ S+S+ + +S
Sbjct: 2619 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSS 2678
Query: 75 ATRVTELPPAPWTFLTSTETLP 96
+ E PAP ++ LP
Sbjct: 2679 CSSDDEAAPAPTAGPSAQAALP 2700
Score = 28.5 bits (62), Expect = 2.5
Identities = 21/81 (25%), Positives = 39/81 (48%)
Query: 18 ASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATR 77
A++P SSS + S ++ S++ S S +SS SSS S+ S+S+ + +S++
Sbjct: 2609 AASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2668
Query: 78 VTELPPAPWTFLTSTETLPGP 98
+ + + E P P
Sbjct: 2669 SSSTTDEDSSCSSDDEAAPAP 2689
Score = 26.6 bits (57), Expect = 9.5
Identities = 18/62 (29%), Positives = 34/62 (54%)
Query: 15 AAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTS 74
A+ +A P+SS + S ++ S++ S S +SS SSS S+ S+S+ + +S
Sbjct: 2605 ASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2664
Query: 75 AT 76
++
Sbjct: 2665 SS 2666
>gi|109638745 transforming growth factor beta 1 induced transcript 1
isoform 1 [Homo sapiens]
Length = 461
Score = 31.2 bits (69), Expect = 0.38
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 16/108 (14%)
Query: 4 SRVAQRLKRMPAAGASAP-PSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSN 62
S V + PAA A+ P SSSG+ G GL L RL + ++T F+I+ ++S S+
Sbjct: 61 STVCKPRSPKPAAPAAPPFSSSSGVLGTGLCELDRLLQELNATQFNIT--DEIMSQFPSS 118
Query: 63 RSASTVCETLTSATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSS 110
+ AS + S + +LP P P L +A ++S
Sbjct: 119 KVASGEQKEDQSEDK-------------KRPSLPSSPSPGLPKASATS 153
>gi|21361591 transforming growth factor beta 1 induced transcript 1
isoform 2 [Homo sapiens]
Length = 444
Score = 31.2 bits (69), Expect = 0.38
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 16/108 (14%)
Query: 4 SRVAQRLKRMPAAGASAP-PSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSN 62
S V + PAA A+ P SSSG+ G GL L RL + ++T F+I+ ++S S+
Sbjct: 44 STVCKPRSPKPAAPAAPPFSSSSGVLGTGLCELDRLLQELNATQFNIT--DEIMSQFPSS 101
Query: 63 RSASTVCETLTSATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSS 110
+ AS + S + +LP P P L +A ++S
Sbjct: 102 KVASGEQKEDQSEDK-------------KRPSLPSSPSPGLPKASATS 136
>gi|239508973 PREDICTED: similar to Mucin-3A [Homo sapiens]
Length = 596
Score = 30.8 bits (68), Expect = 0.50
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 19 SAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATRV 78
S PP+SS LP + TT T ++ + + S S + S+ST+ T+TS +
Sbjct: 366 SLPPTSSSLPTTE-------TATTPMTNL-VTTTTEISSHSTPSFSSSTIYSTVTS--HI 415
Query: 79 TELPPAPWTFLTSTET--LPGPPCPSLVRAD----SSSLMRSGRVSSSCPMTSTS 127
+ A + T++ET P P PS + D S + V +S +T+T+
Sbjct: 416 STSTTAITSHFTTSETAVTPTPVTPSSLSTDIPTTSLRTLTPSSVGTSTSLTTTT 470
>gi|58331120 hypothetical protein LOC29058 isoform 1 [Homo
sapiens]
Length = 183
Score = 30.8 bits (68), Expect = 0.50
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Query: 26 GLPGAGLRCLLRLS-RTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATR 77
G PGA LR L LS R S S LL+SS S+ SAS +C+ + +R
Sbjct: 16 GRPGAALRWSLVLSPRLEPSGVISAHCNLHLLASSDSSASASRLCQRVMMPSR 68
>gi|224451082 cytospin A [Homo sapiens]
Length = 1117
Score = 30.4 bits (67), Expect = 0.66
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 30 AGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATRVTELPPAPWTFL 89
A LR + LSR + +++ +L+ +S SAS V +A T L P+P
Sbjct: 819 AALRQGMGLSRRSSTSSEPTPTVKTLI---KSFDSASQVPNPAAAAIPRTPLSPSP---- 871
Query: 90 TSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTSTSCCRGSLEEMPFME 140
+ PP ++ S+ SG +S+S P+T+ S R + E+P E
Sbjct: 872 -----MKTPPAAAVSPMQRHSI--SGPISTSKPLTALSDKRPNYGEIPVQE 915
>gi|224451080 cytospin A [Homo sapiens]
Length = 1117
Score = 30.4 bits (67), Expect = 0.66
Identities = 31/111 (27%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 30 AGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLTSATRVTELPPAPWTFL 89
A LR + LSR + +++ +L+ +S SAS V +A T L P+P
Sbjct: 819 AALRQGMGLSRRSSTSSEPTPTVKTLI---KSFDSASQVPNPAAAAIPRTPLSPSP---- 871
Query: 90 TSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTSTSCCRGSLEEMPFME 140
+ PP ++ S+ SG +S+S P+T+ S R + E+P E
Sbjct: 872 -----MKTPPAAAVSPMQRHSI--SGPISTSKPLTALSDKRPNYGEIPVQE 915
>gi|191252814 RIMS binding protein 3B [Homo sapiens]
Length = 1639
Score = 30.4 bits (67), Expect = 0.66
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 7 AQRLKRMPAAGASAPPSSSGLPGAGLRCLL-RLSRTTDSTAFSISLASSLLSSSRSNRSA 65
++ L + +A +S+P + L C SR+ DST SL +S+S
Sbjct: 260 SRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTR-------SLPKASKSEERP 312
Query: 66 STVCETLTSATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTS 125
S+ +T T +R PP+P LP PP PS R S+ G S C + +
Sbjct: 313 SSP-DTSTPGSRRLSPPPSP---------LPPPPPPSAHRKLSNPRGGEGSESQPCEVLT 362
Query: 126 TS 127
S
Sbjct: 363 PS 364
>gi|191252806 RIMS binding protein 3C [Homo sapiens]
Length = 1639
Score = 30.4 bits (67), Expect = 0.66
Identities = 34/122 (27%), Positives = 51/122 (41%), Gaps = 18/122 (14%)
Query: 7 AQRLKRMPAAGASAPPSSSGLPGAGLRCLL-RLSRTTDSTAFSISLASSLLSSSRSNRSA 65
++ L + +A +S+P + L C SR+ DST SL +S+S
Sbjct: 260 SRSLGLVSSACSSSPDGLLSTHASSLDCFAPACSRSLDSTR-------SLPKASKSEERP 312
Query: 66 STVCETLTSATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTS 125
S+ +T T +R PP+P LP PP PS R S+ G S C + +
Sbjct: 313 SSP-DTSTPGSRRLSPPPSP---------LPPPPPPSAHRKLSNPRGGEGSESQPCEVLT 362
Query: 126 TS 127
S
Sbjct: 363 PS 364
>gi|222418647 mucin 7, secreted precursor [Homo sapiens]
Length = 377
Score = 30.4 bits (67), Expect = 0.66
Identities = 29/114 (25%), Positives = 45/114 (39%), Gaps = 18/114 (15%)
Query: 14 PAAGASAPPSSSGLPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVCETLT 73
P+A APPSSS P ++TA + +++ + S+S ET
Sbjct: 195 PSATTQAPPSSSAPP--------------ETTA----APPTPPATTPAPPSSSAPPETTA 236
Query: 74 SATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMTSTS 127
+ + PAP + ET PP PS D SS +++ P S +
Sbjct: 237 APPTPSATTPAPLSSSAPPETTAVPPTPSATTLDPSSASAPPETTAAPPTPSAT 290
>gi|169168434 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 30.4 bits (67), Expect = 0.66
Identities = 30/115 (26%), Positives = 39/115 (33%), Gaps = 11/115 (9%)
Query: 15 AAGASAPPSSSG-----LPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVC 69
A GA A PSS G +P G+R L R + R R A+
Sbjct: 50 ALGAPACPSSGGEGLAVVPAPGVRVRRALGRPGSGVGCGEKAREGRKEAKRCGREAAVAM 109
Query: 70 ETLTSATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMT 124
E S E P + P PP P+ A S +R G S P++
Sbjct: 110 EGAASLPADRERSPR------TPGAGPWPPAPARPAAPPCSAVRLGYRSGEWPLS 158
>gi|113417342 PREDICTED: hypothetical protein [Homo sapiens]
Length = 186
Score = 30.4 bits (67), Expect = 0.66
Identities = 30/115 (26%), Positives = 39/115 (33%), Gaps = 11/115 (9%)
Query: 15 AAGASAPPSSSG-----LPGAGLRCLLRLSRTTDSTAFSISLASSLLSSSRSNRSASTVC 69
A GA A PSS G +P G+R L R + R R A+
Sbjct: 50 ALGAPACPSSGGEGLAVVPAPGVRVRRALGRPGSGVGCGEKAREGRKEAKRCGREAAVAM 109
Query: 70 ETLTSATRVTELPPAPWTFLTSTETLPGPPCPSLVRADSSSLMRSGRVSSSCPMT 124
E S E P + P PP P+ A S +R G S P++
Sbjct: 110 EGAASLPADRERSPR------TPGAGPWPPAPARPAAPPCSAVRLGYRSGEWPLS 158
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.123 0.365
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,226,950
Number of Sequences: 37866
Number of extensions: 262280
Number of successful extensions: 2171
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 74
Number of HSP's that attempted gapping in prelim test: 1886
Number of HSP's gapped (non-prelim): 292
length of query: 158
length of database: 18,247,518
effective HSP length: 94
effective length of query: 64
effective length of database: 14,688,114
effective search space: 940039296
effective search space used: 940039296
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.