Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 239750922

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239750922 PREDICTED: hypothetical protein [Homo sapiens]
         (923 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239750922 PREDICTED: hypothetical protein [Homo sapiens]          1924   0.0  
gi|239745320 PREDICTED: hypothetical protein XP_002343437 [Homo ...  1924   0.0  
gi|14149904 anthrax toxin receptor 1 isoform 1 precursor [Homo s...    42   0.003
gi|226498192 atonal homolog 8 [Homo sapiens]                           38   0.038
gi|113429443 PREDICTED: transmembrane protein 46-like [Homo sapi...    38   0.050
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]     37   0.11 
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]     37   0.11 
gi|150170670 piccolo isoform 2 [Homo sapiens]                          36   0.14 
gi|150378539 piccolo isoform 1 [Homo sapiens]                          36   0.14 
gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo ...    36   0.19 
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H...    36   0.19 
gi|15451844 ADAM metallopeptidase domain 19 preproprotein [Homo ...    35   0.25 
gi|67782330 trinucleotide repeat containing 6B isoform 3 [Homo s...    35   0.32 
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre...    35   0.32 
gi|27262667 colony stimulating factor 1 isoform a precursor [Hom...    35   0.42 
gi|27262663 colony stimulating factor 1 isoform b precursor [Hom...    35   0.42 
gi|27262661 colony stimulating factor 1 isoform a precursor [Hom...    35   0.42 
gi|239749931 PREDICTED: FLJ43861 protein [Homo sapiens]                35   0.42 
gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo sap...    35   0.42 
gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]            35   0.42 
gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo sap...    35   0.42 
gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo ...    34   0.55 
gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo ...    34   0.55 
gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo ...    34   0.55 
gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo ...    34   0.55 
gi|40353727 synaptopodin isoform A [Homo sapiens]                      34   0.55 
gi|207442670 double homeobox, 5 [Homo sapiens]                         34   0.55 
gi|152963637 zinc finger protein 787 [Homo sapiens]                    34   0.55 
gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]            34   0.72 
gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]            34   0.72 

>gi|239750922 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 923

 Score = 1924 bits (4983), Expect = 0.0
 Identities = 923/923 (100%), Positives = 923/923 (100%)

Query: 1   MFSTTTAPRCCSSWLELRSRACRISSQCVALTTWGMRLQSVGRMEVSMAKPPAAARCSSS 60
           MFSTTTAPRCCSSWLELRSRACRISSQCVALTTWGMRLQSVGRMEVSMAKPPAAARCSSS
Sbjct: 1   MFSTTTAPRCCSSWLELRSRACRISSQCVALTTWGMRLQSVGRMEVSMAKPPAAARCSSS 60

Query: 61  SSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMSASKFCRPEQ 120
           SSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMSASKFCRPEQ
Sbjct: 61  SSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMSASKFCRPEQ 120

Query: 121 LREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSP 180
           LREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSP
Sbjct: 121 LREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSP 180

Query: 181 GKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPD 240
           GKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPD
Sbjct: 181 GKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPD 240

Query: 241 RHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHV 300
           RHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHV
Sbjct: 241 RHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHV 300

Query: 301 GIKGQVSQALHCPAPSACVDLVIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN 360
           GIKGQVSQALHCPAPSACVDLVIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN
Sbjct: 301 GIKGQVSQALHCPAPSACVDLVIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN 360

Query: 361 VQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRV 420
           VQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRV
Sbjct: 361 VQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRV 420

Query: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSY 480
           EPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSY
Sbjct: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSY 480

Query: 481 TDKSAPSPSRPPPRACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGSVSFHV 540
           TDKSAPSPSRPPPRACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGSVSFHV
Sbjct: 481 TDKSAPSPSRPPPRACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGSVSFHV 540

Query: 541 AQRSPLQVELRGMWGEDRCFSHSQILMGWRNPGLSAPGRKTSFHRVHSHNRLMEGQAHRL 600
           AQRSPLQVELRGMWGEDRCFSHSQILMGWRNPGLSAPGRKTSFHRVHSHNRLMEGQAHRL
Sbjct: 541 AQRSPLQVELRGMWGEDRCFSHSQILMGWRNPGLSAPGRKTSFHRVHSHNRLMEGQAHRL 600

Query: 601 TTSARMRMLSFSLHLYRSFSSETPLAVMNEARLALPAAWIRASTATSCSSSCSEAHRAIT 660
           TTSARMRMLSFSLHLYRSFSSETPLAVMNEARLALPAAWIRASTATSCSSSCSEAHRAIT
Sbjct: 601 TTSARMRMLSFSLHLYRSFSSETPLAVMNEARLALPAAWIRASTATSCSSSCSEAHRAIT 660

Query: 661 LSMTPLSSKARLPASHGPCRRQDTVWMAPASLVPKKLAWLAQPHPFHDSNVQKTPDLLPL 720
           LSMTPLSSKARLPASHGPCRRQDTVWMAPASLVPKKLAWLAQPHPFHDSNVQKTPDLLPL
Sbjct: 661 LSMTPLSSKARLPASHGPCRRQDTVWMAPASLVPKKLAWLAQPHPFHDSNVQKTPDLLPL 720

Query: 721 THNDGTFFASEAFFDTFLEGIKHNLQQVAGSQGHSLAFHAQDGDYSPSSHALLFWVQQYL 780
           THNDGTFFASEAFFDTFLEGIKHNLQQVAGSQGHSLAFHAQDGDYSPSSHALLFWVQQYL
Sbjct: 721 THNDGTFFASEAFFDTFLEGIKHNLQQVAGSQGHSLAFHAQDGDYSPSSHALLFWVQQYL 780

Query: 781 KHLFHFGIRRGHQGLRRCWSAFSEGRYPVSYEATHSQWCHLHCGSVNGLPMALNSAFIPP 840
           KHLFHFGIRRGHQGLRRCWSAFSEGRYPVSYEATHSQWCHLHCGSVNGLPMALNSAFIPP
Sbjct: 781 KHLFHFGIRRGHQGLRRCWSAFSEGRYPVSYEATHSQWCHLHCGSVNGLPMALNSAFIPP 840

Query: 841 ARELADRKVHLPPGSRLENCVYTPGPDPFTTSQCFHLSGSLTYLLLNLAPDVPQGLLENF 900
           ARELADRKVHLPPGSRLENCVYTPGPDPFTTSQCFHLSGSLTYLLLNLAPDVPQGLLENF
Sbjct: 841 ARELADRKVHLPPGSRLENCVYTPGPDPFTTSQCFHLSGSLTYLLLNLAPDVPQGLLENF 900

Query: 901 VLGLQAHTSLQVKDSLVQAAQLL 923
           VLGLQAHTSLQVKDSLVQAAQLL
Sbjct: 901 VLGLQAHTSLQVKDSLVQAAQLL 923


>gi|239745320 PREDICTED: hypothetical protein XP_002343437 [Homo
           sapiens]
          Length = 923

 Score = 1924 bits (4983), Expect = 0.0
 Identities = 923/923 (100%), Positives = 923/923 (100%)

Query: 1   MFSTTTAPRCCSSWLELRSRACRISSQCVALTTWGMRLQSVGRMEVSMAKPPAAARCSSS 60
           MFSTTTAPRCCSSWLELRSRACRISSQCVALTTWGMRLQSVGRMEVSMAKPPAAARCSSS
Sbjct: 1   MFSTTTAPRCCSSWLELRSRACRISSQCVALTTWGMRLQSVGRMEVSMAKPPAAARCSSS 60

Query: 61  SSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMSASKFCRPEQ 120
           SSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMSASKFCRPEQ
Sbjct: 61  SSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMSASKFCRPEQ 120

Query: 121 LREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSP 180
           LREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSP
Sbjct: 121 LREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSP 180

Query: 181 GKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPD 240
           GKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPD
Sbjct: 181 GKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPD 240

Query: 241 RHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHV 300
           RHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHV
Sbjct: 241 RHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHV 300

Query: 301 GIKGQVSQALHCPAPSACVDLVIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN 360
           GIKGQVSQALHCPAPSACVDLVIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN
Sbjct: 301 GIKGQVSQALHCPAPSACVDLVIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN 360

Query: 361 VQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRV 420
           VQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRV
Sbjct: 361 VQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRV 420

Query: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSY 480
           EPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSY
Sbjct: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSY 480

Query: 481 TDKSAPSPSRPPPRACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGSVSFHV 540
           TDKSAPSPSRPPPRACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGSVSFHV
Sbjct: 481 TDKSAPSPSRPPPRACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGSVSFHV 540

Query: 541 AQRSPLQVELRGMWGEDRCFSHSQILMGWRNPGLSAPGRKTSFHRVHSHNRLMEGQAHRL 600
           AQRSPLQVELRGMWGEDRCFSHSQILMGWRNPGLSAPGRKTSFHRVHSHNRLMEGQAHRL
Sbjct: 541 AQRSPLQVELRGMWGEDRCFSHSQILMGWRNPGLSAPGRKTSFHRVHSHNRLMEGQAHRL 600

Query: 601 TTSARMRMLSFSLHLYRSFSSETPLAVMNEARLALPAAWIRASTATSCSSSCSEAHRAIT 660
           TTSARMRMLSFSLHLYRSFSSETPLAVMNEARLALPAAWIRASTATSCSSSCSEAHRAIT
Sbjct: 601 TTSARMRMLSFSLHLYRSFSSETPLAVMNEARLALPAAWIRASTATSCSSSCSEAHRAIT 660

Query: 661 LSMTPLSSKARLPASHGPCRRQDTVWMAPASLVPKKLAWLAQPHPFHDSNVQKTPDLLPL 720
           LSMTPLSSKARLPASHGPCRRQDTVWMAPASLVPKKLAWLAQPHPFHDSNVQKTPDLLPL
Sbjct: 661 LSMTPLSSKARLPASHGPCRRQDTVWMAPASLVPKKLAWLAQPHPFHDSNVQKTPDLLPL 720

Query: 721 THNDGTFFASEAFFDTFLEGIKHNLQQVAGSQGHSLAFHAQDGDYSPSSHALLFWVQQYL 780
           THNDGTFFASEAFFDTFLEGIKHNLQQVAGSQGHSLAFHAQDGDYSPSSHALLFWVQQYL
Sbjct: 721 THNDGTFFASEAFFDTFLEGIKHNLQQVAGSQGHSLAFHAQDGDYSPSSHALLFWVQQYL 780

Query: 781 KHLFHFGIRRGHQGLRRCWSAFSEGRYPVSYEATHSQWCHLHCGSVNGLPMALNSAFIPP 840
           KHLFHFGIRRGHQGLRRCWSAFSEGRYPVSYEATHSQWCHLHCGSVNGLPMALNSAFIPP
Sbjct: 781 KHLFHFGIRRGHQGLRRCWSAFSEGRYPVSYEATHSQWCHLHCGSVNGLPMALNSAFIPP 840

Query: 841 ARELADRKVHLPPGSRLENCVYTPGPDPFTTSQCFHLSGSLTYLLLNLAPDVPQGLLENF 900
           ARELADRKVHLPPGSRLENCVYTPGPDPFTTSQCFHLSGSLTYLLLNLAPDVPQGLLENF
Sbjct: 841 ARELADRKVHLPPGSRLENCVYTPGPDPFTTSQCFHLSGSLTYLLLNLAPDVPQGLLENF 900

Query: 901 VLGLQAHTSLQVKDSLVQAAQLL 923
           VLGLQAHTSLQVKDSLVQAAQLL
Sbjct: 901 VLGLQAHTSLQVKDSLVQAAQLL 923


>gi|14149904 anthrax toxin receptor 1 isoform 1 precursor [Homo
           sapiens]
          Length = 564

 Score = 42.0 bits (97), Expect = 0.003
 Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 7/73 (9%)

Query: 422 PSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYT 481
           P  N +   S PPA      P      P          S+ TP + S P TLP PP +  
Sbjct: 496 PLNNAYHTSSPPPAPIYTPPPPAPHCPP-------PPPSAPTPPIPSPPSTLPPPPQAPP 548

Query: 482 DKSAPSPSRPPPR 494
              AP PSRPPPR
Sbjct: 549 PNRAPPPSRPPPR 561


>gi|226498192 atonal homolog 8 [Homo sapiens]
          Length = 321

 Score = 38.1 bits (87), Expect = 0.038
 Identities = 33/128 (25%), Positives = 44/128 (34%), Gaps = 13/128 (10%)

Query: 385 PQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSV----------PP 434
           P P P P+   + P GG    G+    R    S   +    CF L +V          PP
Sbjct: 73  PVPVPVPVAPAVPPRGGTDTAGERGGSRAPEVS---DARKRCFALGAVGPGLPTPPPPPP 129

Query: 435 AEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRPPPR 494
             P  Q+P    A+P    G R  +    P     P   P PP        P+P   P  
Sbjct: 130 PAPQSQAPGGPEAQPFREPGLRPRILLCAPPARPAPSAPPAPPAPPESTVRPAPPTRPGE 189

Query: 495 ACGKKISY 502
           +    IS+
Sbjct: 190 SSYSSISH 197


>gi|113429443 PREDICTED: transmembrane protein 46-like [Homo
           sapiens]
          Length = 492

 Score = 37.7 bits (86), Expect = 0.050
 Identities = 41/163 (25%), Positives = 60/163 (36%), Gaps = 24/163 (14%)

Query: 326 PPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQRAGRRRP 385
           PPG  + +   SG G+RRG     G N+G G       + +   PD     +   G   P
Sbjct: 281 PPGSHRTA---SGRGLRRGDSEG-GVNRGIG-----PSRVSLLAPDKKRLNNAPRGSAAP 331

Query: 386 QPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPSLQSPWRK 445
            PP  P          +P   +   F+   A+L+   +A     +  P  EPS + P  +
Sbjct: 332 GPPRGPRLQGGGSLTLQPDYAKYATFK--AAALKAAEAAPRDFCQRFPALEPSPRQPPAR 389

Query: 446 RARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSP 488
             RP             +P L +     PW P  Y   +AP P
Sbjct: 390 APRP-------------SPDLPAPLDACPWAPPVYAPPAAPGP 419


>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
          Length = 2285

 Score = 36.6 bits (83), Expect = 0.11
 Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 19/159 (11%)

Query: 336 PSGLGVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLE 395
           PSG G +  TP     NQ   HP   Q  ++ Q P  +P  +Q + +++PQ  P  L   
Sbjct: 459 PSGYGQQGQTPY---YNQQSPHPQQQQPPYSQQPPSQTP-HAQPSYQQQPQSQPPQLQSS 514

Query: 396 IYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPP-AEPSLQSPWRKRARPVGLWG 454
             P   +P Q      +   A    + S      +S PP ++P  QSP+           
Sbjct: 515 QPPYSQQPSQ---PPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPY----------- 560

Query: 455 RRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRPPP 493
           ++Q+     P   S     P P    + ++A S  R PP
Sbjct: 561 QQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPP 599


>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
          Length = 2068

 Score = 36.6 bits (83), Expect = 0.11
 Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 19/159 (11%)

Query: 336 PSGLGVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLE 395
           PSG G +  TP     NQ   HP   Q  ++ Q P  +P  +Q + +++PQ  P  L   
Sbjct: 459 PSGYGQQGQTPY---YNQQSPHPQQQQPPYSQQPPSQTP-HAQPSYQQQPQSQPPQLQSS 514

Query: 396 IYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPP-AEPSLQSPWRKRARPVGLWG 454
             P   +P Q      +   A    + S      +S PP ++P  QSP+           
Sbjct: 515 QPPYSQQPSQ---PPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPY----------- 560

Query: 455 RRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRPPP 493
           ++Q+     P   S     P P    + ++A S  R PP
Sbjct: 561 QQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPP 599


>gi|150170670 piccolo isoform 2 [Homo sapiens]
          Length = 4935

 Score = 36.2 bits (82), Expect = 0.14
 Identities = 77/348 (22%), Positives = 119/348 (34%), Gaps = 58/348 (16%)

Query: 170 GRGRKTRTRSPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTA------ 223
           G G  + T  P  + + L  +    R   A     +V SRA G+      P  A      
Sbjct: 28  GAGSPSHTAIPAGMEADLSQLSEEERRQIA-----AVMSRAQGLPKGSVPPAAAESPSMH 82

Query: 224 --QDIPGSKTPTIGLPSPDRHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPA 281
             Q++  S  P      PD  R    G+    +T    ++ + P  + S    +      
Sbjct: 83  RKQELDSSHPPKQSGRPPDPGRPAQPGLSKSRTTDTFRSEQKLPGRSPSTISLKESKSRT 142

Query: 282 ELEQSFQSSRILHKLFLHVGIKGQVSQALHCPAPSACVDLVIAQPPGDTQ-------DSG 334
           +L++  +SS ++      V     VS  ++   P   +    A     T+       + G
Sbjct: 143 DLKEEHKSS-MMPGFLSEVNALSAVSSVVNKFNPFDLISDSEASQEETTKKQKVVQKEQG 201

Query: 335 RPSGL---GVRRGTPRPRGKNQGFGH-PLNVQKQFTYQDPDCSPCLSQRAGRRRPQPPPR 390
           +P G+    +++  P+P  K QG G  PL        QD       SQ+  + + QPP  
Sbjct: 202 KPEGIIKPPLQQQPPKPIPKQQGPGRDPLQ-------QDGTPKSISSQQPEKIKSQPPGT 254

Query: 391 PLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPSLQSPWRKRARPV 450
                  P  G  Q  Q  H +  L      P      +      +PSL SP        
Sbjct: 255 GK-----PIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSP-------- 301

Query: 451 GLWGRRQELSSSTPGLDSLPGTLP-WPPGSYTDKSAPSPSRPPPRACG 497
                     S  P     PG  P   PG   +KS P P++PP +  G
Sbjct: 302 ----------SKPPIQQPTPGKPPAQQPGH--EKSQPGPAKPPAQPSG 337



 Score = 30.4 bits (67), Expect = 7.9
 Identities = 39/179 (21%), Positives = 58/179 (32%), Gaps = 17/179 (9%)

Query: 327 PGDTQDSGRPSGL--------GVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQ 378
           PG  +   +PSGL        G  +   +P G  +    PL   K    Q     P   Q
Sbjct: 326 PGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQ 385

Query: 379 RAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPS 438
              +   QPP         P   +P   Q+   +       ++  A        P  +P 
Sbjct: 386 PGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPG 445

Query: 439 LQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRPPPRACG 497
              P +  A+  G      + +  T     LPG    PP        P P++PPP+  G
Sbjct: 446 ---PGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPP------QQPGPAKPPPQQPG 495


>gi|150378539 piccolo isoform 1 [Homo sapiens]
          Length = 5142

 Score = 36.2 bits (82), Expect = 0.14
 Identities = 77/348 (22%), Positives = 119/348 (34%), Gaps = 58/348 (16%)

Query: 170 GRGRKTRTRSPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTA------ 223
           G G  + T  P  + + L  +    R   A     +V SRA G+      P  A      
Sbjct: 28  GAGSPSHTAIPAGMEADLSQLSEEERRQIA-----AVMSRAQGLPKGSVPPAAAESPSMH 82

Query: 224 --QDIPGSKTPTIGLPSPDRHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPA 281
             Q++  S  P      PD  R    G+    +T    ++ + P  + S    +      
Sbjct: 83  RKQELDSSHPPKQSGRPPDPGRPAQPGLSKSRTTDTFRSEQKLPGRSPSTISLKESKSRT 142

Query: 282 ELEQSFQSSRILHKLFLHVGIKGQVSQALHCPAPSACVDLVIAQPPGDTQ-------DSG 334
           +L++  +SS ++      V     VS  ++   P   +    A     T+       + G
Sbjct: 143 DLKEEHKSS-MMPGFLSEVNALSAVSSVVNKFNPFDLISDSEASQEETTKKQKVVQKEQG 201

Query: 335 RPSGL---GVRRGTPRPRGKNQGFGH-PLNVQKQFTYQDPDCSPCLSQRAGRRRPQPPPR 390
           +P G+    +++  P+P  K QG G  PL        QD       SQ+  + + QPP  
Sbjct: 202 KPEGIIKPPLQQQPPKPIPKQQGPGRDPLQ-------QDGTPKSISSQQPEKIKSQPPGT 254

Query: 391 PLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPSLQSPWRKRARPV 450
                  P  G  Q  Q  H +  L      P      +      +PSL SP        
Sbjct: 255 GK-----PIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSP-------- 301

Query: 451 GLWGRRQELSSSTPGLDSLPGTLP-WPPGSYTDKSAPSPSRPPPRACG 497
                     S  P     PG  P   PG   +KS P P++PP +  G
Sbjct: 302 ----------SKPPIQQPTPGKPPAQQPGH--EKSQPGPAKPPAQPSG 337



 Score = 30.4 bits (67), Expect = 7.9
 Identities = 39/179 (21%), Positives = 58/179 (32%), Gaps = 17/179 (9%)

Query: 327 PGDTQDSGRPSGL--------GVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQ 378
           PG  +   +PSGL        G  +   +P G  +    PL   K    Q     P   Q
Sbjct: 326 PGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQ 385

Query: 379 RAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPS 438
              +   QPP         P   +P   Q+   +       ++  A        P  +P 
Sbjct: 386 PGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPG 445

Query: 439 LQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRPPPRACG 497
              P +  A+  G      + +  T     LPG    PP        P P++PPP+  G
Sbjct: 446 ---PGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPP------QQPGPAKPPPQQPG 495


>gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo
           sapiens]
          Length = 439

 Score = 35.8 bits (81), Expect = 0.19
 Identities = 34/103 (33%), Positives = 38/103 (36%), Gaps = 12/103 (11%)

Query: 400 GGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQEL 459
           G  P  G+ T       SLR  P+A       V         PWR  A    L G R  L
Sbjct: 132 GVGPDPGRETALGTATLSLRSSPTAGSVSTGLVGKQREGGNGPWR--APVFRLPGARLRL 189

Query: 460 SSSTPGLDSLPGTLPWPPGSYTDKSAPSP-------SRPPPRA 495
           SS  P   +LP   P  P       +PSP       SRPP RA
Sbjct: 190 SSQLPSPTTLPRAAPLTP---YRPGSPSPRGHSRLRSRPPTRA 229


>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
           sapiens]
          Length = 309

 Score = 35.8 bits (81), Expect = 0.19
 Identities = 52/181 (28%), Positives = 63/181 (34%), Gaps = 32/181 (17%)

Query: 325 QPP-GDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQRAGRR 383
           QPP G  Q  G P   G   G P P+G NQ  G P    K      P+  P    + G +
Sbjct: 102 QPPQGGNQSQGPPPRPGKPEGPP-PQGGNQSQGPPPRPGK------PEGPP---PQGGNQ 151

Query: 384 RPQPPPRPLCLE-IYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPSLQS- 441
              PPPRP   E   P GG   QG   H          +P          PP +   QS 
Sbjct: 152 SQGPPPRPGKPEGPPPQGGNQSQGPPPH--------PGKPEG--------PPPQGGNQSQ 195

Query: 442 -PWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRP--PPRACGK 498
            P  +  +P G   +    S   P     P   P   G+      P P +P  PP   G 
Sbjct: 196 GPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGN 255

Query: 499 K 499
           K
Sbjct: 256 K 256



 Score = 31.6 bits (70), Expect = 3.6
 Identities = 52/218 (23%), Positives = 72/218 (33%), Gaps = 22/218 (10%)

Query: 323 IAQPPGDTQDSGRPSGLGVRRG-----TPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLS 377
           ++Q    +  SG+P G   + G     TP P GK +G       Q Q     P       
Sbjct: 23  VSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPP 82

Query: 378 QRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPP-AE 436
            + G +   PPPRP      P G  PQ G  +            P       +  PP   
Sbjct: 83  PQGGNQSQGPPPRP----GKPEGQPPQGGNQSQ----------GPPPRPGKPEGPPPQGG 128

Query: 437 PSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRP--PPR 494
              Q P  +  +P G   +    S   P     P   P   G+ +    P P +P  PP 
Sbjct: 129 NQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPP 188

Query: 495 ACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTE 532
             G +      R  +      +    S+GP P PG  E
Sbjct: 189 QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPE 226


>gi|15451844 ADAM metallopeptidase domain 19 preproprotein [Homo
           sapiens]
          Length = 918

 Score = 35.4 bits (80), Expect = 0.25
 Identities = 48/179 (26%), Positives = 65/179 (36%), Gaps = 23/179 (12%)

Query: 328 GDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCL--SQRAGRRRP 385
           G  + S  PS L  +   P    +N G GH       F  Q P     +  +    R+  
Sbjct: 731 GQLKPSALPSKLRQQFSCPFRVSQNSGTGH---ANPTFKLQTPQGKRKVINTPEILRKPS 787

Query: 386 QPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASL--------RVEPSANCFMLKSVPPAEP 437
           QPPPRP     Y  GG P      H      +         R E S      + +PPA  
Sbjct: 788 QPPPRP--PPDYLRGGSPPAPLPAHLSRAARNSPGPGSQIERTESSRRPPPSRPIPPAPN 845

Query: 438 SLQSPWRKRARPVGLWGRRQELSSSTPGLDSLP---GTLPW-PPGSYTDKSAPSPSRPP 492
            + S    R RP     ++   ++  PG  SLP   G  P  PPG+   +S P  +  P
Sbjct: 846 CIVSQDFSRPRP----PQKALPANPVPGRRSLPRPGGASPLRPPGAGPQQSRPLAALAP 900


>gi|67782330 trinucleotide repeat containing 6B isoform 3 [Homo
           sapiens]
          Length = 1029

 Score = 35.0 bits (79), Expect = 0.32
 Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 15/101 (14%)

Query: 383 RRPQPPPRPLCLEI---------YPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVP 433
           +R QPPP P C+ +            G  P   Q+T      A L+ E        KS P
Sbjct: 142 KRGQPPP-PSCMLLGGGAGPPPCTAPGANPNNAQVTG-----ALLQSESGTAPVWSKSTP 195

Query: 434 PAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLP 474
           PA  +  S W +       WG   +  +ST G  + P   P
Sbjct: 196 PAPDNGTSAWGEPNESSPGWGEMDDTGASTTGWGNTPANAP 236


>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
           preproprotein [Homo sapiens]
          Length = 331

 Score = 35.0 bits (79), Expect = 0.32
 Identities = 52/192 (27%), Positives = 63/192 (32%), Gaps = 45/192 (23%)

Query: 325 QPPGDTQDSGRPSGL----GVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQRA 380
           QP G     G+P G     G R   P P GK Q  G P    K  + + P   P      
Sbjct: 107 QPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQ--GPPPQGDKSRSPRSPPGKPQGPPPQ 164

Query: 381 GRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEP--- 437
           G  +PQ PP P      P G  PQ G+             +P          PP +P   
Sbjct: 165 GGNQPQGPPPP---PGKPQGPPPQGGK-------------KPQG------PPPPGKPQGP 202

Query: 438 --------SLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPS 489
                   S QSP  K   P    G + +     PG    P     P G    +  P P 
Sbjct: 203 PPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP----PQGGNKPQGPPPPG 258

Query: 490 RP--PPRACGKK 499
           +P  PP   G K
Sbjct: 259 KPQGPPAQGGSK 270



 Score = 31.2 bits (69), Expect = 4.6
 Identities = 49/175 (28%), Positives = 59/175 (33%), Gaps = 39/175 (22%)

Query: 326 PPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQRAGRRRP 385
           PPG  Q  G P   G +   P P GK Q  G P    K  + + P   P      G  +P
Sbjct: 53  PPGKPQ--GPPPQGGNKPQGPPPPGKPQ--GPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 108

Query: 386 QPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPSLQSPWRK 445
           Q PP P      P G  PQ G                          PP +P    P   
Sbjct: 109 QGPPPP---PGKPQGPPPQGGNRPQ-------------------GPPPPGKPQGPPPQGD 146

Query: 446 RAR-PVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRPPPRACGKK 499
           ++R P    G+ Q      P   + P   P PPG         P  PPP+  GKK
Sbjct: 147 KSRSPRSPPGKPQ---GPPPQGGNQPQGPPPPPG--------KPQGPPPQG-GKK 189


>gi|27262667 colony stimulating factor 1 isoform a precursor [Homo
           sapiens]
          Length = 554

 Score = 34.7 bits (78), Expect = 0.42
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVG-LWGRRQELSSSTPGLDSLPGTLPWPPGS 479
           +P  NC   K++P ++P+  SP +  A  +  + G   E S  T G   LPG  P     
Sbjct: 186 KPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP----L 241

Query: 480 YTDKSAPSPSRPPPRAC 496
           +T     +  RPP   C
Sbjct: 242 HTVDPGSAKQRPPRSTC 258


>gi|27262663 colony stimulating factor 1 isoform b precursor [Homo
           sapiens]
          Length = 438

 Score = 34.7 bits (78), Expect = 0.42
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVG-LWGRRQELSSSTPGLDSLPGTLPWPPGS 479
           +P  NC   K++P ++P+  SP +  A  +  + G   E S  T G   LPG  P     
Sbjct: 186 KPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP----L 241

Query: 480 YTDKSAPSPSRPPPRAC 496
           +T     +  RPP   C
Sbjct: 242 HTVDPGSAKQRPPRSTC 258


>gi|27262661 colony stimulating factor 1 isoform a precursor [Homo
           sapiens]
          Length = 554

 Score = 34.7 bits (78), Expect = 0.42
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVG-LWGRRQELSSSTPGLDSLPGTLPWPPGS 479
           +P  NC   K++P ++P+  SP +  A  +  + G   E S  T G   LPG  P     
Sbjct: 186 KPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP----L 241

Query: 480 YTDKSAPSPSRPPPRAC 496
           +T     +  RPP   C
Sbjct: 242 HTVDPGSAKQRPPRSTC 258


>gi|239749931 PREDICTED: FLJ43861 protein [Homo sapiens]
          Length = 642

 Score = 34.7 bits (78), Expect = 0.42
 Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 4/103 (3%)

Query: 584 HRVHSHNRLMEGQAHRLTT--SARMRMLSFSLHLYRSFSSETPLAVMNEARLALPA--AW 639
           HR HS   L   ++H      S R    S +LH   S  S    +  + + LALP+  + 
Sbjct: 177 HRSHSSLALPSHRSHSSLALPSLRSHFSSTALHSCGSHFSPVSPSHRSHSSLALPSLRSH 236

Query: 640 IRASTATSCSSSCSEAHRAITLSMTPLSSKARLPASHGPCRRQ 682
             ++   SC S  S    A    M P   +  LP  + PC  Q
Sbjct: 237 FSSTALPSCGSHFSPVGSAAACEMRPDPRRPHLPLPNSPCAGQ 279


>gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 629

 Score = 34.7 bits (78), Expect = 0.42
 Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 19/126 (15%)

Query: 451 GLWGRRQELSSSTPGLDSLPGTL------PWPPGSYTDKSAPSPSR--PPPRACGKKISY 502
           G W +   L    P    LP  +      PWP G++ + S  S     PP  +C  +  Y
Sbjct: 271 GGWSQGLPLPPPPPPAAQLPPIVSQGNAGPWPQGAHGESSLASSQAKAPPDDSCNPRSVY 330

Query: 503 WGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGS-----VSFHVAQRSPLQVELRGMWGED 557
              R+ QH + L R  L      P    TE  S     V   +A+R P      G+W   
Sbjct: 331 ENFRLWQHYKPLARRHL------PQSPDTEALSCFLIPVLRSLARRKPTMTLEEGLWRAM 384

Query: 558 RCFSHS 563
           R + H+
Sbjct: 385 REWQHT 390


>gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 878

 Score = 34.7 bits (78), Expect = 0.42
 Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 19/126 (15%)

Query: 451 GLWGRRQELSSSTPGLDSLPGTL------PWPPGSYTDKSAPSPSR--PPPRACGKKISY 502
           G W +   L    P    LP  +      PWP G++ + S  S     PP  +C  +  Y
Sbjct: 271 GGWSQGLPLPPPPPPAAQLPPIVSQGNAGPWPQGAHGESSLASSQAKAPPDDSCNPRSVY 330

Query: 503 WGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGS-----VSFHVAQRSPLQVELRGMWGED 557
              R+ QH + L R  L      P    TE  S     V   +A+R P      G+W   
Sbjct: 331 ENFRLWQHYKPLARRHL------PQSPDTEALSCFLIPVLRSLARRKPTMTLEEGLWRAM 384

Query: 558 RCFSHS 563
           R + H+
Sbjct: 385 REWQHT 390


>gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 878

 Score = 34.7 bits (78), Expect = 0.42
 Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 19/126 (15%)

Query: 451 GLWGRRQELSSSTPGLDSLPGTL------PWPPGSYTDKSAPSPSR--PPPRACGKKISY 502
           G W +   L    P    LP  +      PWP G++ + S  S     PP  +C  +  Y
Sbjct: 271 GGWSQGLPLPPPPPPAAQLPPIVSQGNAGPWPQGAHGESSLASSQAKAPPDDSCNPRSVY 330

Query: 503 WGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGS-----VSFHVAQRSPLQVELRGMWGED 557
              R+ QH + L R  L      P    TE  S     V   +A+R P      G+W   
Sbjct: 331 ENFRLWQHYKPLARRHL------PQSPDTEALSCFLIPVLRSLARRKPTMTLEEGLWRAM 384

Query: 558 RCFSHS 563
           R + H+
Sbjct: 385 REWQHT 390


>gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo
           sapiens]
          Length = 546

 Score = 34.3 bits (77), Expect = 0.55
 Identities = 48/198 (24%), Positives = 71/198 (35%), Gaps = 42/198 (21%)

Query: 120 QLREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTG-HQGQREWKGRGRKTRTR 178
           Q  ++ TP+R+ L        G+ + +T C   RG   +P G  + Q +   R R    R
Sbjct: 278 QSEDEMTPERLFL--------GVSRGQTECRIPRGPRNRPGGPSRHQAQGMPRVRAGEPR 329

Query: 179 SPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTA----QDIPGSKTPTI 234
            PG   SG    V   R   AF CP    S    I+   ++        Q+ PG ++PT 
Sbjct: 330 PPGA--SGETPRVLSRRRQRAFPCPDCGQSFRLKINLTIHQRTHVEEGRQEAPG-RSPTS 386

Query: 235 GLPSPDRHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILH 294
                           G S   +   +   P   + W P EP+       +S    R L 
Sbjct: 387 C---------------GDSQAMLEPGEVVVPGPVIRWLPEEPEG-----RRSVAGGRAL- 425

Query: 295 KLFLHVGIKGQVSQALHC 312
                VG +   S+  HC
Sbjct: 426 -----VGRRPAASKMYHC 438


>gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo
           sapiens]
          Length = 546

 Score = 34.3 bits (77), Expect = 0.55
 Identities = 48/198 (24%), Positives = 71/198 (35%), Gaps = 42/198 (21%)

Query: 120 QLREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTG-HQGQREWKGRGRKTRTR 178
           Q  ++ TP+R+ L        G+ + +T C   RG   +P G  + Q +   R R    R
Sbjct: 278 QSEDEMTPERLFL--------GVSRGQTECRIPRGPRNRPGGPSRHQAQGMPRVRAGEPR 329

Query: 179 SPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTA----QDIPGSKTPTI 234
            PG   SG    V   R   AF CP    S    I+   ++        Q+ PG ++PT 
Sbjct: 330 PPGA--SGETPRVLSRRRQRAFPCPDCGQSFRLKINLTIHQRTHVEEGRQEAPG-RSPTS 386

Query: 235 GLPSPDRHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILH 294
                           G S   +   +   P   + W P EP+       +S    R L 
Sbjct: 387 C---------------GDSQAMLEPGEVVVPGPVIRWLPEEPEG-----RRSVAGGRAL- 425

Query: 295 KLFLHVGIKGQVSQALHC 312
                VG +   S+  HC
Sbjct: 426 -----VGRRPAASKMYHC 438


>gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo
           sapiens]
          Length = 546

 Score = 34.3 bits (77), Expect = 0.55
 Identities = 48/198 (24%), Positives = 71/198 (35%), Gaps = 42/198 (21%)

Query: 120 QLREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTG-HQGQREWKGRGRKTRTR 178
           Q  ++ TP+R+ L        G+ + +T C   RG   +P G  + Q +   R R    R
Sbjct: 278 QSEDEMTPERLFL--------GVSRGQTECRIPRGPRNRPGGPSRHQAQGMPRVRAGEPR 329

Query: 179 SPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTA----QDIPGSKTPTI 234
            PG   SG    V   R   AF CP    S    I+   ++        Q+ PG ++PT 
Sbjct: 330 PPGA--SGETPRVLSRRRQRAFPCPDCGQSFRLKINLTIHQRTHVEEGRQEAPG-RSPTS 386

Query: 235 GLPSPDRHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILH 294
                           G S   +   +   P   + W P EP+       +S    R L 
Sbjct: 387 C---------------GDSQAMLEPGEVVVPGPVIRWLPEEPEG-----RRSVAGGRAL- 425

Query: 295 KLFLHVGIKGQVSQALHC 312
                VG +   S+  HC
Sbjct: 426 -----VGRRPAASKMYHC 438


>gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo
           sapiens]
          Length = 546

 Score = 34.3 bits (77), Expect = 0.55
 Identities = 48/198 (24%), Positives = 71/198 (35%), Gaps = 42/198 (21%)

Query: 120 QLREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTG-HQGQREWKGRGRKTRTR 178
           Q  ++ TP+R+ L        G+ + +T C   RG   +P G  + Q +   R R    R
Sbjct: 278 QSEDEMTPERLFL--------GVSRGQTECRIPRGPRNRPGGPSRHQAQGMPRVRAGEPR 329

Query: 179 SPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTA----QDIPGSKTPTI 234
            PG   SG    V   R   AF CP    S    I+   ++        Q+ PG ++PT 
Sbjct: 330 PPGA--SGETPRVLSRRRQRAFPCPDCGQSFRLKINLTIHQRTHVEEGRQEAPG-RSPTS 386

Query: 235 GLPSPDRHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILH 294
                           G S   +   +   P   + W P EP+       +S    R L 
Sbjct: 387 C---------------GDSQAMLEPGEVVVPGPVIRWLPEEPEG-----RRSVAGGRAL- 425

Query: 295 KLFLHVGIKGQVSQALHC 312
                VG +   S+  HC
Sbjct: 426 -----VGRRPAASKMYHC 438


>gi|40353727 synaptopodin isoform A [Homo sapiens]
          Length = 903

 Score = 34.3 bits (77), Expect = 0.55
 Identities = 65/285 (22%), Positives = 91/285 (31%), Gaps = 61/285 (21%)

Query: 254 STQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHVGIKGQVSQALHCP 313
           S +I A     PN  LS    E     AEL    QS   + K  +         +   CP
Sbjct: 458 SPRIQAKPKPKPNQNLS----EASGKGAELYARRQSR--MEKYVIESS--SHTPELARCP 509

Query: 314 APSACVDL-------------VIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN 360
           +P+  +               V ++ P  T  +    G     G  RP    Q    P  
Sbjct: 510 SPTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQP---PYQ 566

Query: 361 VQKQFTYQDPDCSPC-LSQRAGRRRPQPPPRPLCLEIYPT---GGEPQQGQMTHFRHCLA 416
           ++       P   P  +S RA       P +P  L++ P    G  P    +        
Sbjct: 567 LRPSLFVLSPIKEPAKVSPRAAS-----PAKPSSLDLVPNLPKGALPPSPALPRPSRSSP 621

Query: 417 SLRVEPSANCFMLKSVPPAEPSLQSP------WRKRARP------------VGLWGRRQE 458
            L   P  +     +V P      SP      W  RA+             +    RR+ 
Sbjct: 622 GLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRES 681

Query: 459 LSSS---TPGLDSLPGTL-------PWPPGSYTDKSAPSPSRPPP 493
           L +S   TPG    P +L       PW PG  +  S+P P  PPP
Sbjct: 682 LPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPP 726


>gi|207442670 double homeobox, 5 [Homo sapiens]
          Length = 197

 Score = 34.3 bits (77), Expect = 0.55
 Identities = 51/210 (24%), Positives = 74/210 (35%), Gaps = 18/210 (8%)

Query: 52  PAAARCSSSSSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMS 111
           PA    S  +S     +  F   LP  +  +     +P   +GP R + L+         
Sbjct: 2   PAEVHGSPPASLCPCQSVKFRPGLPEMALLTALDDTLPEEAQGPGRRMILLSTP--SQSD 59

Query: 112 ASKFCRPEQLREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQ-REWKG 170
           A + C    L      K  L     +P P         W Q   + Q   H+ Q R W G
Sbjct: 60  ALRACFERNLYPGIATKEELAQGIDIPEP-----RVQIWFQNERSCQLRQHRRQSRPWPG 114

Query: 171 RGRKTRTRSPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSK 230
           R    + R     I+G +  + L RA+           R  GI+A R +      +P S+
Sbjct: 115 RRDPQKGRRKRTAITGSQTAL-LLRAFEK--------DRFPGIAA-REELARETGLPESR 164

Query: 231 TPTIGLPSPDRHRGIHMGIPGQSSTQINAA 260
                     RHRG     P Q+S + NAA
Sbjct: 165 IQIWFQNRRARHRGQSGRAPTQASIRCNAA 194


>gi|152963637 zinc finger protein 787 [Homo sapiens]
          Length = 382

 Score = 34.3 bits (77), Expect = 0.55
 Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 11/49 (22%)

Query: 475 WPPGSYTDKSAPSPSRPPPR----------ACGKKISYWGGRMTQHLQT 513
           WPP   +   +  P+ PPPR           CGK  S+W  ++T+H +T
Sbjct: 40  WPPTKLSPPQSAPPAGPPPRPRPPAPYICNECGKSFSHW-SKLTRHQRT 87


>gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 2061

 Score = 33.9 bits (76), Expect = 0.72
 Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 14/133 (10%)

Query: 135  AVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSPGKVISGLEVMVSLA 194
            A+ P+ G  + + S W ++   + P   +G R  + R RK    +PG ++          
Sbjct: 1188 AIAPSAGALRGDRS-WKRKAIASTPGALRGNRSDRSRKRKAIASTPGALLGNRSDRSRKR 1246

Query: 195  RAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPDRHRGIHMGIPGQSS 254
            +A    + PT    R     ACR    T   + G  + T   P+P        G P   S
Sbjct: 1247 KA----IAPTPGAPRIDRSPACRAIAPTPGAL-GDDSSTAIAPTP--------GTPRGDS 1293

Query: 255  TQINAAQAQAPNS 267
            +  N A A  P +
Sbjct: 1294 SPANTAIASTPGA 1306


>gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 2028

 Score = 33.9 bits (76), Expect = 0.72
 Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 14/133 (10%)

Query: 135  AVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSPGKVISGLEVMVSLA 194
            A+ P+ G  + + S W ++   + P   +G R  + R RK    +PG ++          
Sbjct: 1156 AIAPSAGALRGDRS-WKRKAIASTPGALRGNRSDRSRKRKAIASTPGALLGNRSDRSRKR 1214

Query: 195  RAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPDRHRGIHMGIPGQSS 254
            +A    + PT    R     ACR    T   + G  + T   P+P        G P   S
Sbjct: 1215 KA----IAPTPGAPRIDRSPACRAIAPTPGAL-GDDSSTAIAPTP--------GTPRGDS 1261

Query: 255  TQINAAQAQAPNS 267
            +  N A A  P +
Sbjct: 1262 SPANTAIASTPGA 1274


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.132    0.425 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,520,865
Number of Sequences: 37866
Number of extensions: 2560982
Number of successful extensions: 9608
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 9332
Number of HSP's gapped (non-prelim): 458
length of query: 923
length of database: 18,247,518
effective HSP length: 112
effective length of query: 811
effective length of database: 14,006,526
effective search space: 11359292586
effective search space used: 11359292586
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press