Guide to the Human Genome
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Name: ZNF787 Sequence: fasta or formatted (382aa) NCBI GI: 152963637
Description:

zinc finger protein 787

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            12.0         46           6
 C cysteine            4.7         18           1
 D aspartate           4.2         16           4
 E glutamate           7.1         27           3
 F phenylalanine       2.1          8           1
 G glycine            12.3         47           2
 H histidine           5.0         19           1
 I isoleucine          2.9         11           2
 K lysine              4.7         18           2
 L leucine             5.2         20           2
 M methionine          1.3          5           1
 N asparagine          1.0          4           1
 P proline             9.4         36           3
 Q glutamine           3.7         14           2
 R arginine            7.6         29           2
 S serine              7.6         29           2
 T threonine           2.4          9           1
 V valine              4.2         16           2
 W tryptophan          1.0          4           1
 Y tyrosine            1.6          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 787 
ZNF629                0.278   zinc finger protein 629 
ZNF79                 0.259   zinc finger protein 79 
ZNF135                0.258   zinc finger protein 135 
ZNF16                 0.256   zinc finger protein 16 
ZNF16                 0.256   zinc finger protein 16 
PRDM9                 0.255   PR domain containing 9 
ZNF436                0.255   zinc finger protein 436 
ZNF497                0.255   zinc finger protein 497 
ZNF436                0.255   zinc finger protein 436 
ZNF71                 0.254   zinc finger protein 71 
ZNF70                 0.253   zinc finger protein 70 
LOC647678             0.251   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC647678             0.251   PREDICTED: similar to zinc finger protein 347 [Homo...
LOC100287477          0.251   PREDICTED: hypothetical protein XP_002343697 
ZNF771                0.251   zinc finger protein 771 
ZNF771                0.251   zinc finger protein 771 
ZNF133                0.251   zinc finger protein 133 
ZNF133                0.251   zinc finger protein 133 
ZNF211                0.249   zinc finger protein 211 isoform 2 
ZNF211                0.249   zinc finger protein 211 isoform 1 
ZFP2                  0.249   zinc finger protein 2 homolog 
ZNF572                0.247   zinc finger protein 572 
ZFP112                0.246   zinc finger protein 228 isoform 1 
ZFP112                0.246   zinc finger protein 228 isoform 2 
ZNF583                0.242   zinc finger protein 583 
ZNF583                0.242   zinc finger protein 583 
ZNF583                0.242   zinc finger protein 583 
ZNF251                0.240   zinc finger protein 251 
ZNF665                0.239   zinc finger protein 665 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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