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Search of human proteins with 239750275
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo
sapiens]
(126 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 266 2e-72
gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 266 2e-72
gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 266 2e-72
gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 200 3e-52
gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 194 1e-50
gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo ... 191 2e-49
gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo ... 190 3e-49
gi|169184221 PREDICTED: family with sequence similarity 27, memb... 186 5e-48
gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo ... 182 4e-47
gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens] 182 4e-47
gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 175 7e-45
gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo ... 175 7e-45
gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo ... 175 7e-45
gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 175 7e-45
gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 174 1e-44
gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo ... 174 1e-44
gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo ... 174 1e-44
gi|239752497 PREDICTED: similar to family with sequence similari... 168 1e-42
gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens] 164 1e-41
gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo ... 54 3e-08
gi|169209818 PREDICTED: hypothetical protein [Homo sapiens] 42 2e-04
gi|239747174 PREDICTED: hypothetical protein XP_002343931, parti... 38 0.002
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 36 0.009
gi|169210342 PREDICTED: hypothetical protein [Homo sapiens] 35 0.020
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 33 0.075
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 32 0.13
gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens] 32 0.13
gi|65293358 MARVEL domain containing 3 isoform 2 [Homo sapiens] 32 0.13
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap... 32 0.17
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap... 32 0.17
>gi|239755774 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 266 bits (681), Expect = 2e-72
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239750275 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 266 bits (681), Expect = 2e-72
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239744585 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 126
Score = 266 bits (681), Expect = 2e-72
Identities = 126/126 (100%), Positives = 126/126 (100%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC
Sbjct: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH
Sbjct: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|169177315 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 200 bits (508), Expect = 3e-52
Identities = 97/126 (76%), Positives = 104/126 (82%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGM QLLR+RR+SSRGPG PK +P +RK LTAG TQ ETQK AHQRQAAMR+ AL
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
TGHIRPKTH HTG HTQT RERERNTQRLRDRERRENGRHT T+T+THTQ HTA A KH
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRENGRHTHTHTHTHTQRHTAEALKH 120
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|169184225 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 126
Score = 194 bits (493), Expect = 1e-50
Identities = 95/126 (75%), Positives = 101/126 (80%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGM QLLR+RR+SSRGPG PK +P +RK LTAG TQ ETQK AHQRQAAMR+ AL
Sbjct: 1 MGMRFQLLRERRISSRGPGFQAPKADPPRRKRLTAGLMTQVETQKEAHQRQAAMRQTALW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
TGHIRPKTH HTG HTQT RERERNTQRLRDRERRE GRHT +T THTQ HTA A KH
Sbjct: 61 RTGHIRPKTHTHTGIHTQTHRERERNTQRLRDRERRETGRHTHRHTQTHTQRHTAEALKH 120
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 121 TPPGNP 126
>gi|239743788 PREDICTED: hypothetical protein XP_002342958 [Homo
sapiens]
Length = 125
Score = 191 bits (484), Expect = 2e-49
Identities = 94/126 (74%), Positives = 104/126 (82%), Gaps = 1/126 (0%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGM +QLLRDRR+SSRGPGLH+ K +P+Q+K LT G TQAETQK A QRQAAMR+ AL
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
TGH++PKTH HTG HTQT RERERNTQRLRDRERRENGRHT +T THTQ HT A KH
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRHTHRHT-THTQRHTEEALKH 119
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 120 TPPGNP 125
>gi|239743790 PREDICTED: hypothetical protein XP_002342959 [Homo
sapiens]
Length = 124
Score = 190 bits (482), Expect = 3e-49
Identities = 94/126 (74%), Positives = 104/126 (82%), Gaps = 2/126 (1%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGM +QLLRDRR+SSRGPGLH+ K +P+Q+K LT G TQAETQK A QRQAAMR+ AL
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
TGH++PKTH HTG HTQT RERERNTQRLRDRERRENGRH T+T THTQ HT A KH
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENGRH--THTETHTQRHTEEALKH 118
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 119 TPPGNP 124
>gi|169184221 PREDICTED: family with sequence similarity 27, member
E3 [Homo sapiens]
Length = 113
Score = 186 bits (471), Expect = 5e-48
Identities = 89/107 (83%), Positives = 93/107 (86%)
Query: 4 IVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALCCTG 63
I QLLRDRR+SSRGPGLH PK EPR+RK LT G TQAE QK AHQRQAAMRE AL CTG
Sbjct: 3 IFQLLRDRRISSRGPGLHTPKAEPRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTG 62
Query: 64 HIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHT 110
HIRP+TH HTGTHTQTDRERERNTQRLRDRERRENGRHT TYT+ HT
Sbjct: 63 HIRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHT 109
>gi|239749581 PREDICTED: hypothetical protein XP_002347092 [Homo
sapiens]
Length = 122
Score = 182 bits (463), Expect = 4e-47
Identities = 91/126 (72%), Positives = 101/126 (80%), Gaps = 4/126 (3%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGM +QLLRDRR+SSRGPGLH+ K +P+Q+K LT G TQAETQK A QRQAAMR+ AL
Sbjct: 1 MGMRLQLLRDRRISSRGPGLHRAKADPQQQKRLTTGLMTQAETQKEAQQRQAAMRKTALW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
TGH++PKTH HTG HTQT RERERNTQRLRDRERREN HT+ THTQ HT A KH
Sbjct: 61 HTGHLQPKTHTHTGMHTQTHRERERNTQRLRDRERRENHTHTE----THTQRHTEEALKH 116
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 117 TPPGNP 122
>gi|169177259 PREDICTED: similar to Protein FAM27E2 [Homo sapiens]
Length = 113
Score = 182 bits (463), Expect = 4e-47
Identities = 88/107 (82%), Positives = 92/107 (85%)
Query: 4 IVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALCCTG 63
I QLLRDRR+SSRGPGLH PK E R+RK LT G TQAE QK AHQRQAAMRE AL CTG
Sbjct: 3 IFQLLRDRRISSRGPGLHTPKAETRRRKGLTTGLMTQAERQKQAHQRQAAMRETALWCTG 62
Query: 64 HIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHT 110
HIRP+TH HTGTHTQTDRERERNTQRLRDRERRENGRHT TYT+ HT
Sbjct: 63 HIRPRTHTHTGTHTQTDRERERNTQRLRDRERRENGRHTHTYTHRHT 109
>gi|239754574 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 131
Score = 175 bits (444), Expect = 7e-45
Identities = 88/121 (72%), Positives = 94/121 (77%), Gaps = 3/121 (2%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGM QLLRDRR+SSRGPG H K +P +RK LT G TQAETQK AHQRQAAM E L
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
CTGHIRPKTH H GTH QT R+RERNTQRLRDRERRENGRHT T+T THT +HT KH
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHT---HKH 117
Query: 121 T 121
T
Sbjct: 118 T 118
>gi|239749126 PREDICTED: hypothetical protein XP_002346920 [Homo
sapiens]
Length = 131
Score = 175 bits (444), Expect = 7e-45
Identities = 88/121 (72%), Positives = 94/121 (77%), Gaps = 3/121 (2%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGM QLLRDRR+SSRGPG H K +P +RK LT G TQAETQK AHQRQAAM E L
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
CTGHIRPKTH H GTH QT R+RERNTQRLRDRERRENGRHT T+T THT +HT KH
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHT---HKH 117
Query: 121 T 121
T
Sbjct: 118 T 118
>gi|239743178 PREDICTED: hypothetical protein XP_002342769 [Homo
sapiens]
Length = 174
Score = 175 bits (444), Expect = 7e-45
Identities = 88/121 (72%), Positives = 94/121 (77%), Gaps = 3/121 (2%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGM QLLRDRR+SSRGPG H K +P +RK LT G TQAETQK AHQRQAAM E L
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
CTGHIRPKTH H GTH QT R+RERNTQRLRDRERRENGRHT T+T THT +HT KH
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHT---HKH 117
Query: 121 T 121
T
Sbjct: 118 T 118
>gi|239508842 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 174
Score = 175 bits (444), Expect = 7e-45
Identities = 88/121 (72%), Positives = 94/121 (77%), Gaps = 3/121 (2%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGM QLLRDRR+SSRGPG H K +P +RK LT G TQAETQK AHQRQAAM E L
Sbjct: 1 MGMRFQLLRDRRISSRGPGPHAHKADPWRRKQLTTGLMTQAETQKEAHQRQAAMPETVLW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
CTGHIRPKTH H GTH QT R+RERNTQRLRDRERRENGRHT T+T THT +HT KH
Sbjct: 61 CTGHIRPKTHTHKGTHAQTHRKRERNTQRLRDRERRENGRHTHTHTDTHTHTHT---HKH 117
Query: 121 T 121
T
Sbjct: 118 T 118
>gi|239757459 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 122
Score = 174 bits (442), Expect = 1e-44
Identities = 89/126 (70%), Positives = 96/126 (76%), Gaps = 4/126 (3%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MG QLL+DRR+ SRGPG H K +PR RK LT G TQAETQK QRQAAM+E AL
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
TGHI+PKTH HTGTHTQT RE ERNTQRLRDRERRENGRH T+T T+ HTA A KH
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRH----THTQTKGHTAEALKH 116
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 117 TPPGNP 122
>gi|239750316 PREDICTED: hypothetical protein XP_002347358 [Homo
sapiens]
Length = 122
Score = 174 bits (442), Expect = 1e-44
Identities = 89/126 (70%), Positives = 96/126 (76%), Gaps = 4/126 (3%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MG QLL+DRR+ SRGPG H K +PR RK LT G TQAETQK QRQAAM+E AL
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
TGHI+PKTH HTGTHTQT RE ERNTQRLRDRERRENGRH T+T T+ HTA A KH
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRH----THTQTKGHTAEALKH 116
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 117 TPPGNP 122
>gi|239746462 PREDICTED: hypothetical protein XP_002344254 [Homo
sapiens]
Length = 122
Score = 174 bits (442), Expect = 1e-44
Identities = 89/126 (70%), Positives = 96/126 (76%), Gaps = 4/126 (3%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MG QLL+DRR+ SRGPG H K +PR RK LT G TQAETQK QRQAAM+E AL
Sbjct: 1 MGTRQQLLQDRRIFSRGPGFHAAKADPRGRKRLTTGLMTQAETQKEVQQRQAAMQETALW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKH 120
TGHI+PKTH HTGTHTQT RE ERNTQRLRDRERRENGRH T+T T+ HTA A KH
Sbjct: 61 FTGHIQPKTHKHTGTHTQTHREWERNTQRLRDRERRENGRH----THTQTKGHTAEALKH 116
Query: 121 TPPGNP 126
TPPGNP
Sbjct: 117 TPPGNP 122
>gi|239752497 PREDICTED: similar to family with sequence similarity
27, member D1, partial [Homo sapiens]
Length = 122
Score = 168 bits (425), Expect = 1e-42
Identities = 87/122 (71%), Positives = 96/122 (78%), Gaps = 2/122 (1%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGM QLLR++R+SSRGPG H PK + +RK LTAG TQAE +K AHQRQAAMR+ AL
Sbjct: 1 MGMRFQLLREQRISSRGPGFHTPKADLPRRKRLTAGLMTQAEMEKEAHQRQAAMRQTALW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTY--THTQSHTAVAQ 118
TGHI PKTH HTG HTQT RERERNTQRLRDRERRE RHT T+T+ THTQSHTA A
Sbjct: 61 RTGHIWPKTHTHTGIHTQTHRERERNTQRLRDRERREWERHTHTHTHTETHTQSHTAEAL 120
Query: 119 KH 120
KH
Sbjct: 121 KH 122
>gi|239758105 PREDICTED: similar to Protein FAM27D1 [Homo sapiens]
Length = 134
Score = 164 bits (416), Expect = 1e-41
Identities = 89/140 (63%), Positives = 98/140 (70%), Gaps = 20/140 (14%)
Query: 1 MGMIVQLLRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALC 60
MGM QLLRDR +SS GPGLH PK PR+R+ LT G TQAETQK AHQRQA MREIAL
Sbjct: 1 MGMRFQLLRDRCISSHGPGLHTPKAGPRRRRRLTTGCTTQAETQKEAHQRQADMREIALW 60
Query: 61 CTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHT------ 114
TG IRP+T++ QTDRERERNTQR RD+ER+ENGRHT T+T THT SHT
Sbjct: 61 RTGRIRPETYM------QTDRERERNTQRPRDKERKENGRHTHTHTLTHTHSHTHTHTHT 114
Query: 115 --------AVAQKHTPPGNP 126
A A KHTPPGNP
Sbjct: 115 QTHTQDHRAEALKHTPPGNP 134
>gi|239743781 PREDICTED: hypothetical protein XP_002344297 [Homo
sapiens]
Length = 228
Score = 53.9 bits (128), Expect = 3e-08
Identities = 43/122 (35%), Positives = 57/122 (46%), Gaps = 25/122 (20%)
Query: 18 PGLHKPKVEPRQRKP---LTAGHRTQAETQKGAHQRQAAM-REIALCCTGHIRPKTHLHT 73
P L +P P+ P L GH TQAET+ A Q++ R A G P+
Sbjct: 2 PTLPRPSQTPKPEPPGKRLPTGHNTQAETRGEADQKKGRRARNPASGAQGTCVPRR---- 57
Query: 74 GTHTQTDRERERNT---------QRLRDRERREN----GRHTQTYTYTHTQSHTAVAQKH 120
THTQTDR+R+R +R R+RER + G T+ +THTQ+H H
Sbjct: 58 -THTQTDRDRKRGRRKEREGREGERERERERLKRETVVGTQTRARAHTHTQTH---RHTH 113
Query: 121 TP 122
TP
Sbjct: 114 TP 115
>gi|169209818 PREDICTED: hypothetical protein [Homo sapiens]
Length = 135
Score = 41.6 bits (96), Expect = 2e-04
Identities = 19/39 (48%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Query: 60 CCTGHIRPK---THLHTGTHTQTDRERERNTQRLRDRER 95
C H + + TH HT THT+ +RE ER T+R R+RER
Sbjct: 62 CKLNHYKSRILCTHTHTHTHTENERESERETERERERER 100
>gi|239747174 PREDICTED: hypothetical protein XP_002343931, partial
[Homo sapiens]
Length = 213
Score = 38.1 bits (87), Expect = 0.002
Identities = 35/107 (32%), Positives = 46/107 (42%), Gaps = 12/107 (11%)
Query: 9 RDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQK----GAHQRQAAMREIALCCTGH 64
RDR S+ H + R R+ R + ++ G QR+ T
Sbjct: 31 RDRAKESKTEDRHSERDRQRDRERNRERDRDREREKQTDREGERQRERERDRDRQRETER 90
Query: 65 IRPKTHLHTGTHTQTDRER----ERNTQRLRDRER---RENGRHTQT 104
R K T HT+TDRER ER +R+RDRER +E GR QT
Sbjct: 91 ERDKER-ETDRHTETDRERQKQKEREMERVRDREREKQKEMGRERQT 136
Score = 33.1 bits (74), Expect = 0.058
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 11/77 (14%)
Query: 26 EPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALCCTGHIRPKTHLHTGTHTQTDRERER 85
E ++K + +T ET + ++ RE TG R H +RERER
Sbjct: 123 EREKQKEMGRERQTDRETDRERERQAERERE-----TGRERKTEDRHR------ERERER 171
Query: 86 NTQRLRDRERRENGRHT 102
+R R RE +E RHT
Sbjct: 172 KRERERKRETKERERHT 188
Score = 30.4 bits (67), Expect = 0.37
Identities = 12/20 (60%), Positives = 15/20 (75%)
Query: 76 HTQTDRERERNTQRLRDRER 95
HT +RER+R T R RDR+R
Sbjct: 187 HTDMERERQRETDRKRDRQR 206
Score = 29.6 bits (65), Expect = 0.64
Identities = 23/85 (27%), Positives = 36/85 (42%), Gaps = 16/85 (18%)
Query: 24 KVEPRQR-KPLTAGHRTQAETQKGAHQRQAAMREIALCCTGHIRPKTHLHTGTHTQT-DR 81
+V R+R K G Q + + + + A RE TG +T DR
Sbjct: 118 RVRDREREKQKEMGRERQTDRETDRERERQAERE--------------RETGRERKTEDR 163
Query: 82 ERERNTQRLRDRERRENGRHTQTYT 106
RER +R R+RER+ + + +T
Sbjct: 164 HRERERERKRERERKRETKERERHT 188
Score = 28.1 bits (61), Expect = 1.8
Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 1/30 (3%)
Query: 72 HTGTHTQT-DRERERNTQRLRDRERRENGR 100
HT T T+T DR+RER + R+R+R + +
Sbjct: 9 HTHTETETMDRQRERRRETDRERDRAKESK 38
Score = 25.8 bits (55), Expect = 9.2
Identities = 15/54 (27%), Positives = 21/54 (38%)
Query: 68 KTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQTYTYTHTQSHTAVAQKHT 121
+T T + ERER T R R E R R + + T ++HT
Sbjct: 135 QTDRETDRERERQAERERETGRERKTEDRHRERERERKRERERKRETKERERHT 188
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 35.8 bits (81), Expect = 0.009
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 20/67 (29%)
Query: 38 RTQAETQKGAHQRQAAMREIALCCTGHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRE 97
+T+ E +K A + +A+ RE T+ D+ERER R RDR+RR+
Sbjct: 237 KTEREREKQAERERASERE--------------------TERDKERERERDRDRDRDRRQ 276
Query: 98 NGRHTQT 104
R QT
Sbjct: 277 KERERQT 283
Score = 32.7 bits (73), Expect = 0.075
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 78 QTDRERERNTQRLRDRER-RENGRHTQTYTYTHTQSHTAVAQKHTPPG 124
QTDRER+R T+R R +ER RE R + + +H+ G
Sbjct: 162 QTDRERQRQTERNRQKEREREKNRQERRERERQREKENKTEDRHSERG 209
Score = 29.6 bits (65), Expect = 0.64
Identities = 15/28 (53%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 78 QTDRERERNTQRLRDRER-RENGRHTQT 104
+ +RERERN +R R+RER RE R +T
Sbjct: 306 ERERERERNRKRERERERERERERQRET 333
Score = 28.5 bits (62), Expect = 1.4
Identities = 15/32 (46%), Positives = 20/32 (62%), Gaps = 1/32 (3%)
Query: 73 TGTHTQTDRERERNTQRLRDRER-RENGRHTQ 103
T + Q +RERE+N Q R+RER RE T+
Sbjct: 171 TERNRQKEREREKNRQERRERERQREKENKTE 202
Score = 28.5 bits (62), Expect = 1.4
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 78 QTDRERERNTQRLRDRER-RENGRHTQTYT 106
Q +RERER R R+RER RE R Q T
Sbjct: 304 QRERERERERNRKRERERERERERERQRET 333
Score = 28.5 bits (62), Expect = 1.4
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 78 QTDRERERNTQRLRDRERRENGR 100
+ +RERER+ Q R+RE RE R
Sbjct: 370 ERERERERDRQSAREREERERDR 392
Score = 28.1 bits (61), Expect = 1.8
Identities = 11/20 (55%), Positives = 16/20 (80%)
Query: 77 TQTDRERERNTQRLRDRERR 96
T+T+ ER+R T R RDR+R+
Sbjct: 218 TETETERKRQTDRERDRQRK 237
Score = 28.1 bits (61), Expect = 1.8
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 78 QTDRERERNTQRLRDRER---RENGRHTQTYTYTHTQSHTAVAQKHTPP 123
+ DRE ER +R R+RE+ RE R QT Q + + PP
Sbjct: 421 EKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKRSTLYVNPPP 469
Score = 27.7 bits (60), Expect = 2.4
Identities = 18/70 (25%), Positives = 30/70 (42%), Gaps = 10/70 (14%)
Query: 28 RQRKPLTAGHRTQAETQKGAHQRQAAMREIALCCTGHIRPKTHLHTGTHTQTDRERERNT 87
++R+ +T+ ET + +R+ R K H ++ERER T
Sbjct: 60 KERERRREKRQTERETDRKRERRREKDRH----------RKRDRHRERQRDREKERERQT 109
Query: 88 QRLRDRERRE 97
R RDR+R +
Sbjct: 110 DRERDRQREK 119
Score = 27.7 bits (60), Expect = 2.4
Identities = 16/39 (41%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 74 GTHTQTDRERERNTQRLRDRER-RENGRHTQTYTYTHTQ 111
G QTD +RER QR ++ER R+ R Q T + Q
Sbjct: 138 GRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQ 176
Score = 27.3 bits (59), Expect = 3.2
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 80 DRERERNTQRLRDRERRENGRHT 102
DRER R +R R RE+R+ R T
Sbjct: 53 DRERNRQKERERRREKRQTERET 75
Score = 27.3 bits (59), Expect = 3.2
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 9/36 (25%)
Query: 78 QTDRER------ERNTQRLRDRERR---ENGRHTQT 104
QTDRER ERN Q+ R+RE E GR QT
Sbjct: 108 QTDRERDRQREKERNRQKERERETEREGERGRDRQT 143
Score = 27.3 bits (59), Expect = 3.2
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 68 KTHLHTGTHTQTDRERERNTQRLRDRERR 96
+T T QTDRER+R + R+RE++
Sbjct: 217 ETETETERKRQTDRERDRQRKTEREREKQ 245
Score = 26.9 bits (58), Expect = 4.1
Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 22 KPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALCCTGHIRPKTHLHTGTHTQTDR 81
+ K R+RK T R + Q G R+ A RE R + + +R
Sbjct: 337 REKERERKRKRQTEMDR-ERNRQTGREGRRQAERE-------RERERERDRQSAREREER 388
Query: 82 ERERNTQRLRDRERR-ENGRHTQTYT 106
ER+R+ R ++RER+ E R Q T
Sbjct: 389 ERDRDRDRQKERERQTEKDRDGQRET 414
Score = 26.6 bits (57), Expect = 5.4
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 68 KTHLHTGTHTQTDRERERNTQRLRDRER 95
K T +T+R+RER +R R+RER
Sbjct: 286 KRQRRTERDRETERKRERQRERERERER 313
Score = 26.6 bits (57), Expect = 5.4
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Query: 78 QTDRERERNTQRLRDRER-RENGRHTQT 104
+ +RERER + RDRE+ RE R QT
Sbjct: 322 ERERERERQRETERDREKERERKRKRQT 349
Score = 26.2 bits (56), Expect = 7.0
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 78 QTDRERERNTQRLRDRER-RENGRHTQ 103
+ +RER+R T+R R++ER R+ R T+
Sbjct: 324 ERERERQRETERDREKERERKRKRQTE 350
>gi|169210342 PREDICTED: hypothetical protein [Homo sapiens]
Length = 136
Score = 34.7 bits (78), Expect = 0.020
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 4/40 (10%)
Query: 60 CCTGHIRPK---THLHTGTHTQTDRER-ERNTQRLRDRER 95
C H + + TH HT THT+ +RE ER +R R+RER
Sbjct: 62 CKLNHYKSRILCTHTHTHTHTENERESGERQRERERERER 101
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 32.7 bits (73), Expect = 0.075
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 11/80 (13%)
Query: 28 RQRKPLT-AGHRTQAETQKGAHQRQAAMREIALCCTGHIRPKTHLHTGTHTQTDRERERN 86
R+RK T G T+ E + + RE + + H QTDRE+ER
Sbjct: 5 RERKRETDRGKETERERDRQRERENQTERE-------NRHRQRDRHRERDRQTDREKERE 57
Query: 87 TQRLRDRER---RENGRHTQ 103
Q+ RDR+R RE R T+
Sbjct: 58 RQKERDRQRQRERETERETE 77
Score = 30.4 bits (67), Expect = 0.37
Identities = 16/29 (55%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 75 THTQTDRERERNTQRLRDRER-RENGRHT 102
T + DRERER QR R+R+R RE R T
Sbjct: 126 TERERDRERERQRQRERERQRQRERKRET 154
Score = 27.7 bits (60), Expect = 2.4
Identities = 29/103 (28%), Positives = 45/103 (43%), Gaps = 9/103 (8%)
Query: 9 RDRRVSSRGPGLHKPKVEPRQRKPLTAGHRT---QAETQKGAHQRQAAMREIALCCTGHI 65
RDR+ + R + K RQR+ R Q E Q+ +++ RE
Sbjct: 46 RDRQ-TDREKERERQKERDRQRQRERETERETERQRERQRQRERKRQTDRERDKDRDRER 104
Query: 66 RPKTHLHTGTHTQTDRERERNTQRLRDRER-----RENGRHTQ 103
+ +T + + + RER++ T+R RDRER RE R Q
Sbjct: 105 KRETDRNRERNRKGGRERDKQTERERDRERERQRQRERERQRQ 147
Score = 25.8 bits (55), Expect = 9.2
Identities = 22/90 (24%), Positives = 36/90 (40%), Gaps = 3/90 (3%)
Query: 9 RDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALCCTGHIRPK 68
R+R + H+ + R+R T + + ++ QRQ RE + +
Sbjct: 25 RERENQTERENRHRQRDRHRERDRQTDREKERERQKERDRQRQ---RERETERETERQRE 81
Query: 69 THLHTGTHTQTDRERERNTQRLRDRERREN 98
QTDRER+++ R R RE N
Sbjct: 82 RQRQRERKRQTDRERDKDRDRERKRETDRN 111
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapiens]
Length = 1341
Score = 32.0 bits (71), Expect = 0.13
Identities = 12/25 (48%), Positives = 21/25 (84%)
Query: 80 DRERERNTQRLRDRERRENGRHTQT 104
DR+RER+ +R R+R+RR+ RH+++
Sbjct: 1303 DRDRERDRERGRERDRRDTKRHSRS 1327
Score = 27.7 bits (60), Expect = 2.4
Identities = 29/105 (27%), Positives = 43/105 (40%), Gaps = 21/105 (20%)
Query: 24 KVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALCCTGHIRPKTHLHTGTHTQTDRER 83
+ + R+++ Q E +K A + + E R K H+ + DRER
Sbjct: 1244 RAKEREKRRKEQEEEEQKEREKEAERERNRQLE---------REKRREHS---RERDRER 1291
Query: 84 ERNTQ-----RLRDRER-RENGRHTQTYTYTHTQSHTAVAQKHTP 122
ER + R RDRER RE GR T+ H+ + TP
Sbjct: 1292 ERERERDRGDRDRDRERDRERGRERDR---RDTKRHSRSRSRSTP 1333
>gi|65301122 MARVEL domain containing 3 isoform 1 [Homo sapiens]
Length = 410
Score = 32.0 bits (71), Expect = 0.13
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Query: 19 GLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALCCTGHIRPKTHLHTGTHTQ 78
G +P+ PR+R P H Q T R R G+ R +
Sbjct: 6 GAREPRARPRERDPGRRPHPDQGRTHDRPRDRPGDPRR-KRSSDGNRRRDGDRDPERDQE 64
Query: 79 TDRERERNTQRLRDRERREN 98
D R+RN R R+RER +
Sbjct: 65 RDGNRDRNRDRERERERERD 84
>gi|65293358 MARVEL domain containing 3 isoform 2 [Homo sapiens]
Length = 401
Score = 32.0 bits (71), Expect = 0.13
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
Query: 19 GLHKPKVEPRQRKPLTAGHRTQAETQKGAHQRQAAMREIALCCTGHIRPKTHLHTGTHTQ 78
G +P+ PR+R P H Q T R R G+ R +
Sbjct: 6 GAREPRARPRERDPGRRPHPDQGRTHDRPRDRPGDPRR-KRSSDGNRRRDGDRDPERDQE 64
Query: 79 TDRERERNTQRLRDRERREN 98
D R+RN R R+RER +
Sbjct: 65 RDGNRDRNRDRERERERERD 84
>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 31.6 bits (70), Expect = 0.17
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 8 LRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAE-----TQKGAHQRQAAMREIALCCT 62
+RDRR S+R + + R R P R+++ T + + R R+I
Sbjct: 591 IRDRRRSNRNSIERERR---RNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKID-DQR 646
Query: 63 GHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQ 103
G++ +H H G + +R++ER+ +DR++++ R +
Sbjct: 647 GNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKERERE 687
>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 31.6 bits (70), Expect = 0.17
Identities = 24/101 (23%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 8 LRDRRVSSRGPGLHKPKVEPRQRKPLTAGHRTQAE-----TQKGAHQRQAAMREIALCCT 62
+RDRR S+R + + R R P R+++ T + + R R+I
Sbjct: 591 IRDRRRSNRNSIERERR---RNRSPSRERRRSRSRSRDRRTNRASRSRSRDRRKID-DQR 646
Query: 63 GHIRPKTHLHTGTHTQTDRERERNTQRLRDRERRENGRHTQ 103
G++ +H H G + +R++ER+ +DR++++ R +
Sbjct: 647 GNLSGNSHKHKGEAKEQERKKERSRSIDKDRKKKDKERERE 687
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.129 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,696,541
Number of Sequences: 37866
Number of extensions: 231206
Number of successful extensions: 2166
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 1259
Number of HSP's gapped (non-prelim): 611
length of query: 126
length of database: 18,247,518
effective HSP length: 90
effective length of query: 36
effective length of database: 14,839,578
effective search space: 534224808
effective search space used: 534224808
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.