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Search of human proteins with 239749496
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749496 PREDICTED: hypothetical protein [Homo sapiens]
(243 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749496 PREDICTED: hypothetical protein [Homo sapiens] 503 e-143
gi|239743632 PREDICTED: hypothetical protein XP_002342918 [Homo ... 501 e-142
gi|5803177 basic beta 2 syntrophin [Homo sapiens] 34 0.13
gi|239746607 PREDICTED: hypothetical protein XP_002343798 [Homo ... 32 0.38
gi|24497589 aristaless related homeobox [Homo sapiens] 32 0.50
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 32 0.65
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 32 0.65
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 32 0.65
gi|126352608 elastin isoform e precursor [Homo sapiens] 31 0.85
gi|126352322 elastin isoform c precursor [Homo sapiens] 31 0.85
gi|126352700 elastin isoform b precursor [Homo sapiens] 31 0.85
gi|110624765 POU domain, class 3, transcription factor 1 [Homo s... 31 0.85
gi|239746705 PREDICTED: hypothetical protein XP_002343815 [Homo ... 31 1.1
gi|125661043 leukocyte immunoglobulin-like receptor, subfamily B... 30 1.9
gi|125661045 leukocyte immunoglobulin-like receptor, subfamily B... 30 1.9
gi|126352446 elastin isoform d precursor [Homo sapiens] 30 2.5
gi|126352440 elastin isoform a precursor [Homo sapiens] 30 2.5
gi|61888902 wax synthase 1 [Homo sapiens] 29 4.2
gi|239753264 PREDICTED: hypothetical protein [Homo sapiens] 28 5.5
gi|239747823 PREDICTED: hypothetical protein XP_002348330 [Homo ... 28 5.5
gi|239753353 PREDICTED: hypothetical protein [Homo sapiens] 28 7.2
gi|239751430 PREDICTED: hypothetical protein [Homo sapiens] 28 7.2
gi|239747921 PREDICTED: hypothetical protein XP_002346480 [Homo ... 28 7.2
gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo ... 28 7.2
gi|239741815 PREDICTED: hypothetical protein XP_002342320 [Homo ... 28 7.2
gi|123173757 RAVER1 [Homo sapiens] 28 7.2
gi|169171580 PREDICTED: hypothetical protein [Homo sapiens] 28 9.4
gi|113419324 PREDICTED: hypothetical protein [Homo sapiens] 28 9.4
gi|113418864 PREDICTED: hypothetical protein [Homo sapiens] 28 9.4
gi|239509076 PREDICTED: hypothetical protein [Homo sapiens] 28 9.4
>gi|239749496 PREDICTED: hypothetical protein [Homo sapiens]
Length = 243
Score = 503 bits (1296), Expect = e-143
Identities = 243/243 (100%), Positives = 243/243 (100%)
Query: 1 MCGCVFKGKDNCRGSEVGLLPAEGRFRTAPGCPSELCELGKLLLECLAHAHGKDADASAV 60
MCGCVFKGKDNCRGSEVGLLPAEGRFRTAPGCPSELCELGKLLLECLAHAHGKDADASAV
Sbjct: 1 MCGCVFKGKDNCRGSEVGLLPAEGRFRTAPGCPSELCELGKLLLECLAHAHGKDADASAV 60
Query: 61 GCRRGVQHQVLAAAVGEQDGHLLVGAVPGAAAGVWGEAAGRDVAERVSRVGVAPVVGETP 120
GCRRGVQHQVLAAAVGEQDGHLLVGAVPGAAAGVWGEAAGRDVAERVSRVGVAPVVGETP
Sbjct: 61 GCRRGVQHQVLAAAVGEQDGHLLVGAVPGAAAGVWGEAAGRDVAERVSRVGVAPVVGETP 120
Query: 121 GSRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDLLKVLLAHAGG 180
GSRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDLLKVLLAHAGG
Sbjct: 121 GSRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDLLKVLLAHAGG 180
Query: 181 GVQEEDQIVVDTFATCRGRHSGVPAEVQSWAQAHWKQQLGEDTSPRNPPPGGHLSATRPL 240
GVQEEDQIVVDTFATCRGRHSGVPAEVQSWAQAHWKQQLGEDTSPRNPPPGGHLSATRPL
Sbjct: 181 GVQEEDQIVVDTFATCRGRHSGVPAEVQSWAQAHWKQQLGEDTSPRNPPPGGHLSATRPL 240
Query: 241 SPK 243
SPK
Sbjct: 241 SPK 243
>gi|239743632 PREDICTED: hypothetical protein XP_002342918 [Homo
sapiens]
Length = 243
Score = 501 bits (1289), Expect = e-142
Identities = 242/243 (99%), Positives = 242/243 (99%)
Query: 1 MCGCVFKGKDNCRGSEVGLLPAEGRFRTAPGCPSELCELGKLLLECLAHAHGKDADASAV 60
MCGCVFKGKDNCRGSEVG LPAEGRFRTAPGCPSELCELGKLLLECLAHAHGKDADASAV
Sbjct: 1 MCGCVFKGKDNCRGSEVGPLPAEGRFRTAPGCPSELCELGKLLLECLAHAHGKDADASAV 60
Query: 61 GCRRGVQHQVLAAAVGEQDGHLLVGAVPGAAAGVWGEAAGRDVAERVSRVGVAPVVGETP 120
GCRRGVQHQVLAAAVGEQDGHLLVGAVPGAAAGVWGEAAGRDVAERVSRVGVAPVVGETP
Sbjct: 61 GCRRGVQHQVLAAAVGEQDGHLLVGAVPGAAAGVWGEAAGRDVAERVSRVGVAPVVGETP 120
Query: 121 GSRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDLLKVLLAHAGG 180
GSRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDLLKVLLAHAGG
Sbjct: 121 GSRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDLLKVLLAHAGG 180
Query: 181 GVQEEDQIVVDTFATCRGRHSGVPAEVQSWAQAHWKQQLGEDTSPRNPPPGGHLSATRPL 240
GVQEEDQIVVDTFATCRGRHSGVPAEVQSWAQAHWKQQLGEDTSPRNPPPGGHLSATRPL
Sbjct: 181 GVQEEDQIVVDTFATCRGRHSGVPAEVQSWAQAHWKQQLGEDTSPRNPPPGGHLSATRPL 240
Query: 241 SPK 243
SPK
Sbjct: 241 SPK 243
>gi|5803177 basic beta 2 syntrophin [Homo sapiens]
Length = 540
Score = 33.9 bits (76), Expect = 0.13
Identities = 25/73 (34%), Positives = 31/73 (42%), Gaps = 2/73 (2%)
Query: 89 GAAAGVWGEAAGRDVAERVSRVGVAPVVGETPGSRLDLLLRAKESQLEGRGGPVAVAHD- 147
G A VW A + E + R VV E G L L A ++LE GP A A +
Sbjct: 13 GPAMAVWTRATKAGLVELLLRERWVRVVAELSGESLSLTGDAAAAELEPALGPAAAAFNG 72
Query: 148 -PHTGAVGAHLEG 159
P+ G G L G
Sbjct: 73 LPNGGGAGDSLPG 85
>gi|239746607 PREDICTED: hypothetical protein XP_002343798 [Homo
sapiens]
Length = 452
Score = 32.3 bits (72), Expect = 0.38
Identities = 21/59 (35%), Positives = 31/59 (52%), Gaps = 4/59 (6%)
Query: 134 QLEG-RGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDLL---KVLLAHAGGGVQEEDQI 188
QL+G +G VAV H HT H +G V H ++L +V + +A G V +ED +
Sbjct: 310 QLDGLKGALVAVLHHAHTRPCKPHADGTQPVDHVDDEVLLQCEVGVPNALGAVDDEDHV 368
>gi|24497589 aristaless related homeobox [Homo sapiens]
Length = 562
Score = 32.0 bits (71), Expect = 0.50
Identities = 20/43 (46%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 205 AEVQSWAQ---AHWK--QQLGEDTSPRNPPPGGHLSATRPLSP 242
A VQ W Q A W+ ++ G T P P G LSAT PLSP
Sbjct: 370 ARVQVWFQNRRAKWRKREKAGAQTHPPGLPFPGPLSATHPLSP 412
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 31.6 bits (70), Expect = 0.65
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 25/121 (20%)
Query: 120 PGSRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDLLKVLLAHAG 179
PG R+ L A+ S GR VAV+ AVG + V H P +L
Sbjct: 839 PGGRVLTLASARASD-SGRYSCVAVS------AVGEDRQDVVLQVHMPPSIL-------- 883
Query: 180 GGVQEEDQIVVDTFATCRGRHSGVPAEVQSWAQAHWKQQLGEDTSPRNPPPGGHLSATRP 239
G + +V + + +P V SW WK D P P PG HLSA +
Sbjct: 884 -GEELNVSVVANESVALECQSHAMPPPVLSW----WK-----DGRPLEPRPGVHLSADKA 933
Query: 240 L 240
L
Sbjct: 934 L 934
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 31.6 bits (70), Expect = 0.65
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 25/121 (20%)
Query: 120 PGSRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDLLKVLLAHAG 179
PG R+ L A+ S GR VAV+ AVG + V H P +L
Sbjct: 2030 PGGRVLTLASARASD-SGRYSCVAVS------AVGEDRQDVVLQVHMPPSIL-------- 2074
Query: 180 GGVQEEDQIVVDTFATCRGRHSGVPAEVQSWAQAHWKQQLGEDTSPRNPPPGGHLSATRP 239
G + +V + + +P V SW WK D P P PG HLSA +
Sbjct: 2075 -GEELNVSVVANESVALECQSHAMPPPVLSW----WK-----DGRPLEPRPGVHLSADKA 2124
Query: 240 L 240
L
Sbjct: 2125 L 2125
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 31.6 bits (70), Expect = 0.65
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 25/121 (20%)
Query: 120 PGSRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDLLKVLLAHAG 179
PG R+ L A+ S GR VAV+ AVG + V H P +L
Sbjct: 748 PGGRVLTLASARASD-SGRYSCVAVS------AVGEDRQDVVLQVHMPPSIL-------- 792
Query: 180 GGVQEEDQIVVDTFATCRGRHSGVPAEVQSWAQAHWKQQLGEDTSPRNPPPGGHLSATRP 239
G + +V + + +P V SW WK D P P PG HLSA +
Sbjct: 793 -GEELNVSVVANESVALECQSHAMPPPVLSW----WK-----DGRPLEPRPGVHLSADKA 842
Query: 240 L 240
L
Sbjct: 843 L 843
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 31.2 bits (69), Expect = 0.85
Identities = 37/109 (33%), Positives = 45/109 (41%), Gaps = 13/109 (11%)
Query: 65 GVQHQVLAAAVGEQDGHLLVGAVPGAAAGVWGEAAGRDVAERVSR---VGVAPVVGETPG 121
G+ + AAA + + LV V G A GV G A G VA V VGVAP VG PG
Sbjct: 436 GISPEAQAAAAAKAAKYGLVPGV-GVAPGV-GVAPGVGVAPGVGLAPGVGVAPGVGVAPG 493
Query: 122 SRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDL 170
+ + G GG A A A A L +G +P L
Sbjct: 494 VGV--------APGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGL 534
Score = 28.1 bits (61), Expect = 7.2
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 84 VGAVPGAAAGVWGEAAGRDVAER---VSRVGVAPVVGETPG 121
VG VPG +AA A + V VGVAP VG PG
Sbjct: 429 VGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 469
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 31.2 bits (69), Expect = 0.85
Identities = 37/109 (33%), Positives = 45/109 (41%), Gaps = 13/109 (11%)
Query: 65 GVQHQVLAAAVGEQDGHLLVGAVPGAAAGVWGEAAGRDVAERVSR---VGVAPVVGETPG 121
G+ + AAA + + LV V G A GV G A G VA V VGVAP VG PG
Sbjct: 441 GISPEAQAAAAAKAAKYGLVPGV-GVAPGV-GVAPGVGVAPGVGLAPGVGVAPGVGVAPG 498
Query: 122 SRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDL 170
+ + G GG A A A A L +G +P L
Sbjct: 499 VGV--------APGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGL 539
Score = 28.1 bits (61), Expect = 7.2
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 84 VGAVPGAAAGVWGEAAGRDVAER---VSRVGVAPVVGETPG 121
VG VPG +AA A + V VGVAP VG PG
Sbjct: 434 VGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 474
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 31.2 bits (69), Expect = 0.85
Identities = 37/109 (33%), Positives = 45/109 (41%), Gaps = 13/109 (11%)
Query: 65 GVQHQVLAAAVGEQDGHLLVGAVPGAAAGVWGEAAGRDVAERVSR---VGVAPVVGETPG 121
G+ + AAA + + LV V G A GV G A G VA V VGVAP VG PG
Sbjct: 426 GISPEAQAAAAAKAAKYGLVPGV-GVAPGV-GVAPGVGVAPGVGLAPGVGVAPGVGVAPG 483
Query: 122 SRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDL 170
+ + G GG A A A A L +G +P L
Sbjct: 484 VGV--------APGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPGL 524
Score = 28.1 bits (61), Expect = 7.2
Identities = 18/41 (43%), Positives = 20/41 (48%), Gaps = 3/41 (7%)
Query: 84 VGAVPGAAAGVWGEAAGRDVAER---VSRVGVAPVVGETPG 121
VG VPG +AA A + V VGVAP VG PG
Sbjct: 419 VGGVPGVGISPEAQAAAAAKAAKYGLVPGVGVAPGVGVAPG 459
>gi|110624765 POU domain, class 3, transcription factor 1 [Homo
sapiens]
Length = 451
Score = 31.2 bits (69), Expect = 0.85
Identities = 39/149 (26%), Positives = 44/149 (29%), Gaps = 12/149 (8%)
Query: 88 PGAAAGVWGEAAGRDVAERVSRVGVAPVVGETPGSRLDLLLRAKESQLEGRGGPVAVAHD 147
PG AG G D A + A + R L E G G PV +AH
Sbjct: 12 PGGGAGGTGPLMHPDAAAAAAAAAAAERLHAGAAYREVQKLMHHEWLGAGAGHPVGLAHP 71
Query: 148 ---PHTGAVGAHLEGVHQVGHPLPDLLKVLLAHAGGGVQEEDQIVVDTFATCRGRHSGVP 204
P G G G + H GGG D R H G
Sbjct: 72 QWLPTGGGGGGDWAGGPHLEHGKA---------GGGGTGRADDGGGGGGFHARLVHQGAA 122
Query: 205 AEVQSWAQAHWKQQLGEDTSPRNPPPGGH 233
+WAQ LG SP GGH
Sbjct: 123 HAGAAWAQGSTAHHLGPAMSPSPGASGGH 151
>gi|239746705 PREDICTED: hypothetical protein XP_002343815 [Homo
sapiens]
Length = 411
Score = 30.8 bits (68), Expect = 1.1
Identities = 27/97 (27%), Positives = 42/97 (43%), Gaps = 8/97 (8%)
Query: 21 PAEGRFR-TAPGCPSELCELGKLLLECLAHAHGKDADASA------VGCRRGVQHQVLAA 73
P EG R T PG P ++ + AH + D A++ +G QH + A
Sbjct: 69 PGEGVLRATGPG-PDVQPQMCSNISRARAHTYSADEKATSKFWPASLGSTPVQQHLLDAV 127
Query: 74 AVGEQDGHLLVGAVPGAAAGVWGEAAGRDVAERVSRV 110
VG+ + + G+A G +G D+A R SR+
Sbjct: 128 GVGDPEAGGSLHGCAGSARAAVGAVSGPDLAARSSRL 164
>gi|125661043 leukocyte immunoglobulin-like receptor, subfamily B,
member 3 isoform 1 [Homo sapiens]
Length = 632
Score = 30.0 bits (66), Expect = 1.9
Identities = 19/61 (31%), Positives = 26/61 (42%)
Query: 120 PGSRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDLLKVLLAHAG 179
P RL + A + Q E PV AH G++ H + HP L V+ H+G
Sbjct: 364 PPLRLRSMYGAHKYQAEFPMSPVTSAHAGTYRCYGSYSSNPHLLSHPSEPLELVVSGHSG 423
Query: 180 G 180
G
Sbjct: 424 G 424
>gi|125661045 leukocyte immunoglobulin-like receptor, subfamily B,
member 3 isoform 2 [Homo sapiens]
Length = 631
Score = 30.0 bits (66), Expect = 1.9
Identities = 19/61 (31%), Positives = 26/61 (42%)
Query: 120 PGSRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDLLKVLLAHAG 179
P RL + A + Q E PV AH G++ H + HP L V+ H+G
Sbjct: 364 PPLRLRSMYGAHKYQAEFPMSPVTSAHAGTYRCYGSYSSNPHLLSHPSEPLELVVSGHSG 423
Query: 180 G 180
G
Sbjct: 424 G 424
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 29.6 bits (65), Expect = 2.5
Identities = 41/121 (33%), Positives = 47/121 (38%), Gaps = 15/121 (12%)
Query: 55 ADASAVGCRRGVQHQVLAAAVGEQDGHLLVGAVPGA--AAGVWGEAAGRDVAERVSR--- 109
A A+A + GV AAA G VPG A GV G A G VA V
Sbjct: 448 AAAAAKAAKYGVGTPAAAAAKAAAKAAQF-GLVPGVGVAPGV-GVAPGVGVAPGVGLAPG 505
Query: 110 VGVAPVVGETPGSRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPD 169
VGVAP VG PG + + G GG A A A A L +G +P
Sbjct: 506 VGVAPGVGVAPGVGV--------APGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPG 557
Query: 170 L 170
L
Sbjct: 558 L 558
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 29.6 bits (65), Expect = 2.5
Identities = 41/121 (33%), Positives = 47/121 (38%), Gaps = 15/121 (12%)
Query: 55 ADASAVGCRRGVQHQVLAAAVGEQDGHLLVGAVPGA--AAGVWGEAAGRDVAERVSR--- 109
A A+A + GV AAA G VPG A GV G A G VA V
Sbjct: 443 AAAAAKAAKYGVGTPAAAAAKAAAKAAQF-GLVPGVGVAPGV-GVAPGVGVAPGVGLAPG 500
Query: 110 VGVAPVVGETPGSRLDLLLRAKESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPD 169
VGVAP VG PG + + G GG A A A A L +G +P
Sbjct: 501 VGVAPGVGVAPGVGV--------APGIGPGGVAAAAKSAAKVAAKAQLRAAAGLGAGIPG 552
Query: 170 L 170
L
Sbjct: 553 L 553
>gi|61888902 wax synthase 1 [Homo sapiens]
Length = 328
Score = 28.9 bits (63), Expect = 4.2
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 4 CVFKGKDNCRGSEVGLLPAEGRFRTAPGCPSELCELGKLLLECLAHAHGKDADA 57
CVF G+ C+GS GLLP T G P L ++ K E + H DA
Sbjct: 253 CVFYGQSFCQGS-TGLLPYSRPIVTVVGEPLPLPQIEKPSQEMVDKYHALYMDA 305
>gi|239753264 PREDICTED: hypothetical protein [Homo sapiens]
Length = 480
Score = 28.5 bits (62), Expect = 5.5
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 156 HLEGVHQVGHPLPDLLKVLLAHAGGGVQEEDQIVVDTFATCRGRHSGVPAEVQSWAQAHW 215
H E HQ HPLP + V +H G V+ GR +G A WA+
Sbjct: 351 HPEREHQDDHPLPHRVLVSSSHPTGAALVR---VLRLLPWPWGRRAG-RASPGLWAKRAG 406
Query: 216 KQQLGEDTSPRNPPPGGHLSATRPLSPK 243
+LG R PP SA RP+ +
Sbjct: 407 SWELG-----RPAPPCPEASAPRPVGSR 429
>gi|239747823 PREDICTED: hypothetical protein XP_002348330 [Homo
sapiens]
Length = 444
Score = 28.5 bits (62), Expect = 5.5
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 9/88 (10%)
Query: 156 HLEGVHQVGHPLPDLLKVLLAHAGGGVQEEDQIVVDTFATCRGRHSGVPAEVQSWAQAHW 215
H E HQ HPLP + V +H G V+ GR +G A WA+
Sbjct: 351 HPEREHQDDHPLPHRVLVSSSHPTGAALVR---VLRLLPWPWGRRAG-RASPGLWAKRAG 406
Query: 216 KQQLGEDTSPRNPPPGGHLSATRPLSPK 243
+LG R PP SA RP+ +
Sbjct: 407 SWELG-----RPAPPCPEASAPRPVGSR 429
>gi|239753353 PREDICTED: hypothetical protein [Homo sapiens]
Length = 448
Score = 28.1 bits (61), Expect = 7.2
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 26/114 (22%)
Query: 45 ECLAHAHGKDADASAVGCRRGVQHQVLAAAVGEQD-----------GHLLVGAVPGAAAG 93
E L G+ +VG G QV+AA G +D H+ VG P AAA
Sbjct: 323 ESLVVGWGRTGSIGSVGGVGGGVAQVIAALGGVRDVVEAAGLVLVGTHVRVGRAPAAAA- 381
Query: 94 VWGEAAGRDVAERVSRVGVAPVVG----ETPGSRLDLLLRAKESQLEGRGGPVA 143
A RV VGV VG G L L+ A + + R G A
Sbjct: 382 ----------ARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATRAGAAA 425
>gi|239751430 PREDICTED: hypothetical protein [Homo sapiens]
Length = 303
Score = 28.1 bits (61), Expect = 7.2
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 6/50 (12%)
Query: 196 CRGRHSGVPAEVQSWAQAHWKQQLGEDTSPRNPP------PGGHLSATRP 239
CRG SG P V++WA A G R P P G SA P
Sbjct: 129 CRGAASGAPRWVRTWAAAAVAAGPGRSAPQREPRAAWAACPAGPSSAAGP 178
>gi|239747921 PREDICTED: hypothetical protein XP_002346480 [Homo
sapiens]
Length = 448
Score = 28.1 bits (61), Expect = 7.2
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 26/114 (22%)
Query: 45 ECLAHAHGKDADASAVGCRRGVQHQVLAAAVGEQD-----------GHLLVGAVPGAAAG 93
E L G+ +VG G QV+AA G +D H+ VG P AAA
Sbjct: 323 ESLVVGWGRTGSIGSVGGVGGGVAQVIAALGGVRDVVEAAGLVLVGTHVRVGRAPAAAA- 381
Query: 94 VWGEAAGRDVAERVSRVGVAPVVG----ETPGSRLDLLLRAKESQLEGRGGPVA 143
A RV VGV VG G L L+ A + + R G A
Sbjct: 382 ----------ARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATRAGAAA 425
>gi|239745934 PREDICTED: hypothetical protein XP_002343619 [Homo
sapiens]
Length = 303
Score = 28.1 bits (61), Expect = 7.2
Identities = 18/50 (36%), Positives = 20/50 (40%), Gaps = 6/50 (12%)
Query: 196 CRGRHSGVPAEVQSWAQAHWKQQLGEDTSPRNPP------PGGHLSATRP 239
CRG SG P V++WA A G R P P G SA P
Sbjct: 129 CRGAASGAPRWVRTWAAAAVAAGPGRSAPQREPRAAWAACPAGPSSAAGP 178
>gi|239741815 PREDICTED: hypothetical protein XP_002342320 [Homo
sapiens]
Length = 448
Score = 28.1 bits (61), Expect = 7.2
Identities = 34/114 (29%), Positives = 42/114 (36%), Gaps = 26/114 (22%)
Query: 45 ECLAHAHGKDADASAVGCRRGVQHQVLAAAVGEQD-----------GHLLVGAVPGAAAG 93
E L G+ +VG G QV+AA G +D H+ VG P AAA
Sbjct: 323 ESLVVGWGRTGSIGSVGGVGGGVAQVIAALGGVRDVVEAAGLVLVGTHVRVGRAPAAAA- 381
Query: 94 VWGEAAGRDVAERVSRVGVAPVVG----ETPGSRLDLLLRAKESQLEGRGGPVA 143
A RV VGV VG G L L+ A + + R G A
Sbjct: 382 ----------ARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATRAGAAA 425
>gi|123173757 RAVER1 [Homo sapiens]
Length = 756
Score = 28.1 bits (61), Expect = 7.2
Identities = 46/179 (25%), Positives = 67/179 (37%), Gaps = 34/179 (18%)
Query: 76 GEQDGHLLVGAVPGAAAGVWGEAAGRDVAERVSRVGVAP-----VVGETPGSRLDLLLRA 130
G Q + L+G +P A G E R G P V+G G R L L
Sbjct: 424 GAQPANPLLGELP---------AGGGLPPELPPRRGKPPPLLPSVLGPAGGDREALGLGP 474
Query: 131 KESQLEGRGGPVAVAHDPHTGAVGAHLEGVHQVGHPLPDLLKVLLAHAGGGVQEEDQIVV 190
+QL PV G G+ L G+ + PLP V L G ++ +I +
Sbjct: 475 PAAQLTPPPAPV--------GLRGSGLRGLQKDSGPLPTPPGVSLL---GEPPKDYRIPL 523
Query: 191 DTFATCRGRHSGVPA------EVQSWAQAHWKQQLGEDTSPRNPPPGGHLSATRPLSPK 243
+ + HS +PA E + W A ++ E P PGG S+++ K
Sbjct: 524 NPYLNL---HSLLPASNLAGKEARGWGGAGRSRRPAEGPPTNPPAPGGGSSSSKAFQLK 579
>gi|169171580 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 27.7 bits (60), Expect = 9.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 217 QQLGEDTSPRNPPPGGHLSATRPLSPK 243
Q G SPR PP LS +RP SP+
Sbjct: 132 QASGPSRSPRVPPAHPELSGSRPRSPR 158
>gi|113419324 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 27.7 bits (60), Expect = 9.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 217 QQLGEDTSPRNPPPGGHLSATRPLSPK 243
Q G SPR PP LS +RP SP+
Sbjct: 132 QASGPSRSPRVPPAHPELSGSRPRSPR 158
>gi|113418864 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 27.7 bits (60), Expect = 9.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 217 QQLGEDTSPRNPPPGGHLSATRPLSPK 243
Q G SPR PP LS +RP SP+
Sbjct: 132 QASGPSRSPRVPPAHPELSGSRPRSPR 158
>gi|239509076 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 27.7 bits (60), Expect = 9.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Query: 217 QQLGEDTSPRNPPPGGHLSATRPLSPK 243
Q G SPR PP LS +RP SP+
Sbjct: 132 QASGPSRSPRVPPAHPELSGSRPRSPR 158
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.136 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,847,850
Number of Sequences: 37866
Number of extensions: 608209
Number of successful extensions: 1679
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 1654
Number of HSP's gapped (non-prelim): 40
length of query: 243
length of database: 18,247,518
effective HSP length: 99
effective length of query: 144
effective length of database: 14,498,784
effective search space: 2087824896
effective search space used: 2087824896
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.