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Search of human proteins with 239749181
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239749181 PREDICTED: hypothetical protein XP_002346944 [Homo
sapiens]
(317 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239749181 PREDICTED: hypothetical protein XP_002346944 [Homo ... 656 0.0
gi|169171337 PREDICTED: similar to Six transmembrane epithelial ... 341 4e-94
gi|169170942 PREDICTED: hypothetical protein LOC256227 [Homo sap... 341 4e-94
gi|9558759 six transmembrane epithelial antigen of the prostate ... 287 1e-77
gi|100913194 six transmembrane epithelial antigen of the prostat... 149 4e-36
gi|100913196 six transmembrane epithelial antigen of the prostat... 149 4e-36
gi|56549147 dudulin 2 isoform b [Homo sapiens] 146 3e-35
gi|56549145 dudulin 2 isoform a [Homo sapiens] 146 3e-35
gi|59853425 dudulin 2 isoform b [Homo sapiens] 146 3e-35
gi|100913198 six transmembrane epithelial antigen of the prostat... 121 7e-28
gi|100815815 tumor necrosis factor, alpha-induced protein 9 [Hom... 114 9e-26
gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precurs... 39 0.005
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 36 0.051
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 36 0.051
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 36 0.051
gi|215490056 meningioma expressed antigen 5 (hyaluronidase) isof... 35 0.067
gi|11024698 meningioma expressed antigen 5 (hyaluronidase) isofo... 35 0.067
gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens] 35 0.11
gi|157412247 RUN and SH3 domain containing 1 isoform b [Homo sap... 34 0.15
gi|157412245 RUN and SH3 domain containing 1 isoform a [Homo sap... 34 0.15
gi|148833506 obscurin, cytoskeletal calmodulin and titin-interac... 34 0.15
gi|239748061 PREDICTED: hypothetical protein XP_002346523 [Homo ... 34 0.15
gi|239741954 PREDICTED: hypothetical protein XP_002342361 [Homo ... 34 0.15
gi|27894378 chloride intracellular channel 6 [Homo sapiens] 34 0.15
gi|239757861 PREDICTED: similar to armadillo repeat containing, ... 34 0.20
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 34 0.20
gi|4505531 oxysterol binding protein [Homo sapiens] 34 0.20
gi|91208420 bassoon protein [Homo sapiens] 33 0.33
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 33 0.33
gi|33239445 eukaryotic translation initiation factor 3, subunit ... 33 0.33
>gi|239749181 PREDICTED: hypothetical protein XP_002346944 [Homo
sapiens]
Length = 317
Score = 656 bits (1692), Expect = 0.0
Identities = 317/317 (100%), Positives = 317/317 (100%)
Query: 1 MLNSKHSLSTHRSPTGEKAKAGSRFGATSWCQSHLHTAWSKGIARVPWIQFLPEASSPRA 60
MLNSKHSLSTHRSPTGEKAKAGSRFGATSWCQSHLHTAWSKGIARVPWIQFLPEASSPRA
Sbjct: 1 MLNSKHSLSTHRSPTGEKAKAGSRFGATSWCQSHLHTAWSKGIARVPWIQFLPEASSPRA 60
Query: 61 PPSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEAPRSGGSGAAWGPHL 120
PPSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEAPRSGGSGAAWGPHL
Sbjct: 61 PPSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEAPRSGGSGAAWGPHL 120
Query: 121 WAAAAAETHGQAKAKSGWLKPYYFIELMESRKDITNQEELWKMKPRRNLEEDDYLVKVQQ 180
WAAAAAETHGQAKAKSGWLKPYYFIELMESRKDITNQEELWKMKPRRNLEEDDYLVKVQQ
Sbjct: 121 WAAAAAETHGQAKAKSGWLKPYYFIELMESRKDITNQEELWKMKPRRNLEEDDYLVKVQQ 180
Query: 181 NKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLGIVSL 240
NKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLGIVSL
Sbjct: 181 NKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLGIVSL 240
Query: 241 LLGTIHALIFAWNKWIDIKQFVWYTPPTFMIAVFLPIVVLIFKSILFLPCLRKKILKIRH 300
LLGTIHALIFAWNKWIDIKQFVWYTPPTFMIAVFLPIVVLIFKSILFLPCLRKKILKIRH
Sbjct: 241 LLGTIHALIFAWNKWIDIKQFVWYTPPTFMIAVFLPIVVLIFKSILFLPCLRKKILKIRH 300
Query: 301 GWEDVTKINKTEICSQL 317
GWEDVTKINKTEICSQL
Sbjct: 301 GWEDVTKINKTEICSQL 317
>gi|169171337 PREDICTED: similar to Six transmembrane epithelial
antigen of prostate [Homo sapiens]
Length = 450
Score = 341 bits (875), Expect = 4e-94
Identities = 163/175 (93%), Positives = 168/175 (96%)
Query: 1 MLNSKHSLSTHRSPTGEKAKAGSRFGATSWCQSHLHTAWSKGIARVPWIQFLPEASSPRA 60
MLNSKHSLSTH+SPTGEKAKAG RFGATSWCQSHLHTAWSKGIARVPW QFLPEASSPRA
Sbjct: 1 MLNSKHSLSTHQSPTGEKAKAGGRFGATSWCQSHLHTAWSKGIARVPWSQFLPEASSPRA 60
Query: 61 PPSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEAPRSGGSGAAWGPHL 120
P SHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEA RSGGSGAAWG HL
Sbjct: 61 PLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHL 120
Query: 121 WAAAAAETHGQAKAKSGWLKPYYFIELMESRKDITNQEELWKMKPRRNLEEDDYL 175
AAAAAETHGQA A+SGWLKPYYFIELMESRKDITNQEE+WKMKPRRNLE++DYL
Sbjct: 121 PAAAAAETHGQATARSGWLKPYYFIELMESRKDITNQEEIWKMKPRRNLEDNDYL 175
Score = 114 bits (286), Expect = 9e-26
Identities = 55/56 (98%), Positives = 56/56 (100%)
Query: 177 KVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQ 232
+VQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQ
Sbjct: 346 QVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQ 401
>gi|169170942 PREDICTED: hypothetical protein LOC256227 [Homo
sapiens]
Length = 450
Score = 341 bits (875), Expect = 4e-94
Identities = 163/175 (93%), Positives = 168/175 (96%)
Query: 1 MLNSKHSLSTHRSPTGEKAKAGSRFGATSWCQSHLHTAWSKGIARVPWIQFLPEASSPRA 60
MLNSKHSLSTH+SPTGEKAKAG RFGATSWCQSHLHTAWSKGIARVPW QFLPEASSPRA
Sbjct: 1 MLNSKHSLSTHQSPTGEKAKAGGRFGATSWCQSHLHTAWSKGIARVPWSQFLPEASSPRA 60
Query: 61 PPSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEAPRSGGSGAAWGPHL 120
P SHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEA RSGGSGAAWG HL
Sbjct: 61 PLSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEASRSGGSGAAWGRHL 120
Query: 121 WAAAAAETHGQAKAKSGWLKPYYFIELMESRKDITNQEELWKMKPRRNLEEDDYL 175
AAAAAETHGQA A+SGWLKPYYFIELMESRKDITNQEE+WKMKPRRNLE++DYL
Sbjct: 121 PAAAAAETHGQATARSGWLKPYYFIELMESRKDITNQEEIWKMKPRRNLEDNDYL 175
Score = 114 bits (286), Expect = 9e-26
Identities = 55/56 (98%), Positives = 56/56 (100%)
Query: 177 KVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQ 232
+VQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQ
Sbjct: 346 QVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQ 401
>gi|9558759 six transmembrane epithelial antigen of the prostate
[Homo sapiens]
Length = 339
Score = 287 bits (734), Expect = 1e-77
Identities = 140/141 (99%), Positives = 141/141 (100%)
Query: 177 KVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLG 236
+VQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLG
Sbjct: 199 QVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLG 258
Query: 237 IVSLLLGTIHALIFAWNKWIDIKQFVWYTPPTFMIAVFLPIVVLIFKSILFLPCLRKKIL 296
IVSLLLGTIHALIFAWNKWIDIKQFVWYTPPTFMIAVFLPIVVLIFKSILFLPCLRKKIL
Sbjct: 259 IVSLLLGTIHALIFAWNKWIDIKQFVWYTPPTFMIAVFLPIVVLIFKSILFLPCLRKKIL 318
Query: 297 KIRHGWEDVTKINKTEICSQL 317
KIRHGWEDVTKINKTEICSQL
Sbjct: 319 KIRHGWEDVTKINKTEICSQL 339
Score = 65.1 bits (157), Expect = 8e-11
Identities = 51/154 (33%), Positives = 78/154 (50%), Gaps = 10/154 (6%)
Query: 148 MESRKDITNQEELWKMKPRRNLEEDDYLVKVQQNKEDAWIEHDVWRMEIYVSLGIVGLAI 207
MESRKDITNQEELWKMKPRRNLEEDDYL K E + ++ V + ++ +
Sbjct: 1 MESRKDITNQEELWKMKPRRNLEEDDYLHK--DTGETSMLKRPV-LLHLHQTAHADEFDC 57
Query: 208 LALLAVTSIPSVSDSLTWREFHYIQSKLGIVSLLLGTIHALIFAWNKWIDIKQFVWYTPP 267
+ L T L + I S + +LL IH L + ++ +Y P
Sbjct: 58 PSELQHTQELFPQWHLPIKIAAIIASLTFLYTLLREVIHPLATSHQQY-------FYKIP 110
Query: 268 TFMIAVFLPIVVLIFKSILFLPCLRKKILKIRHG 301
+I LP+V + ++++LP + I+++ +G
Sbjct: 111 ILVINKVLPMVSITLLALVYLPGVIAAIVQLHNG 144
>gi|100913194 six transmembrane epithelial antigen of the prostate 2
isoform a [Homo sapiens]
Length = 490
Score = 149 bits (375), Expect = 4e-36
Identities = 65/127 (51%), Positives = 97/127 (76%)
Query: 177 KVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLG 236
+V N E++W E +VWR+E+Y+S GI+ L +L+LLAVTSIPSVS++L WREF +IQS LG
Sbjct: 340 QVHANIENSWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALNWREFSFIQSTLG 399
Query: 237 IVSLLLGTIHALIFAWNKWIDIKQFVWYTPPTFMIAVFLPIVVLIFKSILFLPCLRKKIL 296
V+LL+ T H LI+ W + + + + +YTPP F++A+ LP +V++ K ILFLPC+ +K+
Sbjct: 400 YVALLISTFHVLIYGWKRAFEEEYYRFYTPPNFVLALVLPSIVILGKIILFLPCISRKLK 459
Query: 297 KIRHGWE 303
+I+ GWE
Sbjct: 460 RIKKGWE 466
>gi|100913196 six transmembrane epithelial antigen of the prostate 2
isoform a [Homo sapiens]
Length = 490
Score = 149 bits (375), Expect = 4e-36
Identities = 65/127 (51%), Positives = 97/127 (76%)
Query: 177 KVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLG 236
+V N E++W E +VWR+E+Y+S GI+ L +L+LLAVTSIPSVS++L WREF +IQS LG
Sbjct: 340 QVHANIENSWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALNWREFSFIQSTLG 399
Query: 237 IVSLLLGTIHALIFAWNKWIDIKQFVWYTPPTFMIAVFLPIVVLIFKSILFLPCLRKKIL 296
V+LL+ T H LI+ W + + + + +YTPP F++A+ LP +V++ K ILFLPC+ +K+
Sbjct: 400 YVALLISTFHVLIYGWKRAFEEEYYRFYTPPNFVLALVLPSIVILGKIILFLPCISRKLK 459
Query: 297 KIRHGWE 303
+I+ GWE
Sbjct: 460 RIKKGWE 466
>gi|56549147 dudulin 2 isoform b [Homo sapiens]
Length = 488
Score = 146 bits (368), Expect = 3e-35
Identities = 61/135 (45%), Positives = 96/135 (71%)
Query: 177 KVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLG 236
+V NK W+E +VWRMEIY+SLG++ L L+LLAVTS+PS+++SL WREF ++QS LG
Sbjct: 340 QVLANKSHLWVEEEVWRMEIYLSLGVLALGTLSLLAVTSLPSIANSLNWREFSFVQSSLG 399
Query: 237 IVSLLLGTIHALIFAWNKWIDIKQFVWYTPPTFMIAVFLPIVVLIFKSILFLPCLRKKIL 296
V+L+L T+H L + W + + ++ +Y PPTF + + +P VV++ K++ LPC+ +++
Sbjct: 400 FVALVLSTLHTLTYGWTRAFEESRYKFYLPPTFTLTLLVPCVVILAKALFLLPCISRRLA 459
Query: 297 KIRHGWEDVTKINKT 311
+IR GWE + I T
Sbjct: 460 RIRRGWERESTIKFT 474
>gi|56549145 dudulin 2 isoform a [Homo sapiens]
Length = 498
Score = 146 bits (368), Expect = 3e-35
Identities = 61/135 (45%), Positives = 96/135 (71%)
Query: 177 KVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLG 236
+V NK W+E +VWRMEIY+SLG++ L L+LLAVTS+PS+++SL WREF ++QS LG
Sbjct: 350 QVLANKSHLWVEEEVWRMEIYLSLGVLALGTLSLLAVTSLPSIANSLNWREFSFVQSSLG 409
Query: 237 IVSLLLGTIHALIFAWNKWIDIKQFVWYTPPTFMIAVFLPIVVLIFKSILFLPCLRKKIL 296
V+L+L T+H L + W + + ++ +Y PPTF + + +P VV++ K++ LPC+ +++
Sbjct: 410 FVALVLSTLHTLTYGWTRAFEESRYKFYLPPTFTLTLLVPCVVILAKALFLLPCISRRLA 469
Query: 297 KIRHGWEDVTKINKT 311
+IR GWE + I T
Sbjct: 470 RIRRGWERESTIKFT 484
>gi|59853425 dudulin 2 isoform b [Homo sapiens]
Length = 488
Score = 146 bits (368), Expect = 3e-35
Identities = 61/135 (45%), Positives = 96/135 (71%)
Query: 177 KVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLG 236
+V NK W+E +VWRMEIY+SLG++ L L+LLAVTS+PS+++SL WREF ++QS LG
Sbjct: 340 QVLANKSHLWVEEEVWRMEIYLSLGVLALGTLSLLAVTSLPSIANSLNWREFSFVQSSLG 399
Query: 237 IVSLLLGTIHALIFAWNKWIDIKQFVWYTPPTFMIAVFLPIVVLIFKSILFLPCLRKKIL 296
V+L+L T+H L + W + + ++ +Y PPTF + + +P VV++ K++ LPC+ +++
Sbjct: 400 FVALVLSTLHTLTYGWTRAFEESRYKFYLPPTFTLTLLVPCVVILAKALFLLPCISRRLA 459
Query: 297 KIRHGWEDVTKINKT 311
+IR GWE + I T
Sbjct: 460 RIRRGWERESTIKFT 474
>gi|100913198 six transmembrane epithelial antigen of the prostate 2
isoform b [Homo sapiens]
Length = 454
Score = 121 bits (304), Expect = 7e-28
Identities = 53/105 (50%), Positives = 80/105 (76%)
Query: 177 KVQQNKEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLG 236
+V N E++W E +VWR+E+Y+S GI+ L +L+LLAVTSIPSVS++L WREF +IQS LG
Sbjct: 340 QVHANIENSWNEEEVWRIEMYISFGIMSLGLLSLLAVTSIPSVSNALNWREFSFIQSTLG 399
Query: 237 IVSLLLGTIHALIFAWNKWIDIKQFVWYTPPTFMIAVFLPIVVLI 281
V+LL+ T H LI+ W + + + + +YTPP F++A+ LP +V++
Sbjct: 400 YVALLISTFHVLIYGWKRAFEEEYYRFYTPPNFVLALVLPSIVIL 444
>gi|100815815 tumor necrosis factor, alpha-induced protein 9 [Homo
sapiens]
Length = 459
Score = 114 bits (286), Expect = 9e-26
Identities = 47/126 (37%), Positives = 80/126 (63%)
Query: 182 KEDAWIEHDVWRMEIYVSLGIVGLAILALLAVTSIPSVSDSLTWREFHYIQSKLGIVSLL 241
KE+ + W + YV+LGI+G + LL +TS+PSVS+++ WREF ++QSKLG ++L+
Sbjct: 333 KENPFSTSSAWLSDSYVALGILGFFLFVLLGITSLPSVSNAVNWREFRFVQSKLGYLTLI 392
Query: 242 LGTIHALIFAWNKWIDIKQFVWYTPPTFMIAVFLPIVVLIFKSILFLPCLRKKILKIRHG 301
L T H L++ +++ WY P +++ + +P VL+ K +L +PC+ + +IR G
Sbjct: 393 LCTAHTLVYGGKRFLSPSNLRWYLPAAYVLGLIIPCTVLVIKFVLIMPCVDNTLTRIRQG 452
Query: 302 WEDVTK 307
WE +K
Sbjct: 453 WERNSK 458
>gi|42544153 leukocyte receptor tyrosine kinase isoform 1 precursor
[Homo sapiens]
Length = 864
Score = 39.3 bits (90), Expect = 0.005
Identities = 28/84 (33%), Positives = 32/84 (38%), Gaps = 4/84 (4%)
Query: 58 PRAPPSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAG--LEAPRSGGSGA- 114
PR E N + P GRG AGG G T + P AG L+ GG G
Sbjct: 242 PRDRGRTQASPEKLENRSEAPGSGGRGGAAGGGGGWTSRAPSPQAGRSLQEGAEGGQGCS 301
Query: 115 -AWGPHLWAAAAAETHGQAKAKSG 137
AW WAAA G +G
Sbjct: 302 EAWATLGWAAAGGFGGGGGACTAG 325
>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 35.8 bits (81), Expect = 0.051
Identities = 32/101 (31%), Positives = 39/101 (38%), Gaps = 17/101 (16%)
Query: 12 RSPTGEKAKAGSRFGATS----WCQSHLHTAWSKGIARVPWIQFLPEASSPRAPPSHSQQ 67
R GE+A A + FG W + H A G+AR P + A RAPP
Sbjct: 223 RRRRGERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPP----- 277
Query: 68 EEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEAPR 108
+ P P AP GA R + A A GL PR
Sbjct: 278 -------RPRPHPAS-PAPGDGALRGAEATAPAALGLVQPR 310
>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 35.8 bits (81), Expect = 0.051
Identities = 32/101 (31%), Positives = 39/101 (38%), Gaps = 17/101 (16%)
Query: 12 RSPTGEKAKAGSRFGATS----WCQSHLHTAWSKGIARVPWIQFLPEASSPRAPPSHSQQ 67
R GE+A A + FG W + H A G+AR P + A RAPP
Sbjct: 223 RRRRGERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPP----- 277
Query: 68 EEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEAPR 108
+ P P AP GA R + A A GL PR
Sbjct: 278 -------RPRPHPAS-PAPGDGALRGAEATAPAALGLVQPR 310
>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
sapiens]
Length = 344
Score = 35.8 bits (81), Expect = 0.051
Identities = 32/101 (31%), Positives = 39/101 (38%), Gaps = 17/101 (16%)
Query: 12 RSPTGEKAKAGSRFGATS----WCQSHLHTAWSKGIARVPWIQFLPEASSPRAPPSHSQQ 67
R GE+A A + FG W + H A G+AR P + A RAPP
Sbjct: 223 RRRRGERAAAAAEFGLGGRTCVWQGAAQHRARPAGLARAPRARPRDPAGVSRAPP----- 277
Query: 68 EEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEAPR 108
+ P P AP GA R + A A GL PR
Sbjct: 278 -------RPRPHPAS-PAPGDGALRGAEATAPAALGLVQPR 310
>gi|215490056 meningioma expressed antigen 5 (hyaluronidase) isoform
b [Homo sapiens]
Length = 863
Score = 35.4 bits (80), Expect = 0.067
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 86 PAGGAGRATDKEAGPAAGLEAPRSGGSGAAWGPHLWAAAAAETHGQAKAKSGWLKPYYFI 145
PA AG + + A PA G + P G A G AA A + + +P+
Sbjct: 21 PAASAGASLEPPAAPAPGEDNPAGAGGAAVAG----AAGGARRFLCGVVEGFYGRPW--- 73
Query: 146 ELMESRKDITNQEELWKMKPRRNLEEDDY 174
+ME RK++ + + W++ +DDY
Sbjct: 74 -VMEQRKELFRRLQKWELNTYLYAPKDDY 101
>gi|11024698 meningioma expressed antigen 5 (hyaluronidase) isoform
a [Homo sapiens]
Length = 916
Score = 35.4 bits (80), Expect = 0.067
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Query: 86 PAGGAGRATDKEAGPAAGLEAPRSGGSGAAWGPHLWAAAAAETHGQAKAKSGWLKPYYFI 145
PA AG + + A PA G + P G A G AA A + + +P+
Sbjct: 21 PAASAGASLEPPAAPAPGEDNPAGAGGAAVAG----AAGGARRFLCGVVEGFYGRPW--- 73
Query: 146 ELMESRKDITNQEELWKMKPRRNLEEDDY 174
+ME RK++ + + W++ +DDY
Sbjct: 74 -VMEQRKELFRRLQKWELNTYLYAPKDDY 101
>gi|21264339 SRY (sex determining region Y)-box 12 [Homo sapiens]
Length = 315
Score = 34.7 bits (78), Expect = 0.11
Identities = 28/83 (33%), Positives = 36/83 (43%), Gaps = 14/83 (16%)
Query: 83 RGAPAGGAGRATDKEAGPAAGLEAPRSGGSGAAWGPHLWAAAAAETHGQAKAKSGWLKPY 142
R P GG+G + + GP + P GG AA GP AAA E + +
Sbjct: 123 RPRPPGGSGGGSRLKPGP----QLPGRGGRRAAGGPLGGGAAAPEDDDEDDDE------- 171
Query: 143 YFIELMESRKDITNQEELWKMKP 165
EL+E R T ELW+M P
Sbjct: 172 ---ELLEVRLVETPGRELWRMVP 191
>gi|157412247 RUN and SH3 domain containing 1 isoform b [Homo
sapiens]
Length = 796
Score = 34.3 bits (77), Expect = 0.15
Identities = 26/88 (29%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Query: 46 VPWIQFLPEASSPRAPPSHSQQEEAAMNMKDVPEPCGRG-APAGGAGRATDKEAGPAAGL 104
V W P P PP + + + GR +PA G KE G AGL
Sbjct: 392 VGWALVPPRPPPPPVPPRRKKNRPGLQPIAEGQSEEGRAVSPAAGEEAPAAKEPGAQAGL 451
Query: 105 EAPRSGG-SGAAWGPHLWAAAAAETHGQ 131
E S +G LW A A GQ
Sbjct: 452 EVRSSWSFAGVPGAQRLWMAEAQSGTGQ 479
>gi|157412245 RUN and SH3 domain containing 1 isoform a [Homo
sapiens]
Length = 902
Score = 34.3 bits (77), Expect = 0.15
Identities = 26/88 (29%), Positives = 31/88 (35%), Gaps = 2/88 (2%)
Query: 46 VPWIQFLPEASSPRAPPSHSQQEEAAMNMKDVPEPCGRG-APAGGAGRATDKEAGPAAGL 104
V W P P PP + + + GR +PA G KE G AGL
Sbjct: 392 VGWALVPPRPPPPPVPPRRKKNRPGLQPIAEGQSEEGRAVSPAAGEEAPAAKEPGAQAGL 451
Query: 105 EAPRSGG-SGAAWGPHLWAAAAAETHGQ 131
E S +G LW A A GQ
Sbjct: 452 EVRSSWSFAGVPGAQRLWMAEAQSGTGQ 479
>gi|148833506 obscurin, cytoskeletal calmodulin and titin-interacting
RhoGEF isoform b [Homo sapiens]
Length = 7968
Score = 34.3 bits (77), Expect = 0.15
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 54 EASSPRAPPSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEAPRSGGSG 113
E S P QE+A M + GRG AG AG T G A G+ G G
Sbjct: 7156 EDLSDSTPTLQRPQEQATMRKFSLG---GRGGYAGVAGYGTFAFGGDAGGML-----GQG 7207
Query: 114 AAWGPHLWAAAAAETHGQAKAKS 136
W WA + +E Q +A++
Sbjct: 7208 PMWARIAWAVSQSEEEEQEEARA 7230
>gi|239748061 PREDICTED: hypothetical protein XP_002346523 [Homo
sapiens]
Length = 182
Score = 34.3 bits (77), Expect = 0.15
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 10/69 (14%)
Query: 53 PEASSPRAPPSHSQQEEAAMNMKDVP----EPCGRGAPAGGAGRATDKEAGPAAGLEAPR 108
P+A +P P S A N + +P +P P G+ T EA P G +A
Sbjct: 101 PQAETPEEPHS------AVPNRRQLPAASEDPFSSHTPLASCGQVTPPEAAPGNGSQATS 154
Query: 109 SGGSGAAWG 117
GGS A G
Sbjct: 155 HGGSALAAG 163
>gi|239741954 PREDICTED: hypothetical protein XP_002342361 [Homo
sapiens]
Length = 152
Score = 34.3 bits (77), Expect = 0.15
Identities = 22/69 (31%), Positives = 29/69 (42%), Gaps = 10/69 (14%)
Query: 53 PEASSPRAPPSHSQQEEAAMNMKDVP----EPCGRGAPAGGAGRATDKEAGPAAGLEAPR 108
P+A +P P S A N + +P +P P G+ T EA P G +A
Sbjct: 71 PQAETPEEPHS------AVPNRRQLPAASEDPFSSHTPLASCGQVTPPEAAPGNGSQATS 124
Query: 109 SGGSGAAWG 117
GGS A G
Sbjct: 125 HGGSALAAG 133
>gi|27894378 chloride intracellular channel 6 [Homo sapiens]
Length = 686
Score = 34.3 bits (77), Expect = 0.15
Identities = 24/88 (27%), Positives = 32/88 (36%), Gaps = 2/88 (2%)
Query: 52 LPEASSPR--APPSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEAPRS 109
+ EA+ P AP E A + EP G A G + E P +
Sbjct: 1 MAEAAEPEGVAPGPQGPPEVPAPLAERPGEPGAAGGEAEGPEGSEGAEEAPRGAAAVKEA 60
Query: 110 GGSGAAWGPHLWAAAAAETHGQAKAKSG 137
GG G GP A HG+ +A+ G
Sbjct: 61 GGGGPDRGPEAEARGTRGAHGETEAEEG 88
>gi|239757861 PREDICTED: similar to armadillo repeat containing,
X-linked 4 [Homo sapiens]
Length = 2382
Score = 33.9 bits (76), Expect = 0.20
Identities = 24/65 (36%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 54 EASSPRAPPSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDKEAGPAAGLEAPRSGGSG 113
EA + + S + EE A V G GA AG EAG AG EA G+G
Sbjct: 1876 EAENKASSGSWIRSEEVAYMGSCVGAEAGAGAEAGAGA-----EAGAGAGAEAGAEAGAG 1930
Query: 114 AAWGP 118
A GP
Sbjct: 1931 AGAGP 1935
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 33.9 bits (76), Expect = 0.20
Identities = 28/74 (37%), Positives = 34/74 (45%), Gaps = 15/74 (20%)
Query: 81 CGRGAPAG---GAGRATD----------KEAGPAAGLEAPRSGG-SGAAWGPHLWAAAAA 126
C +G P AGRA D KEAGP AGL PR+ A PH + AA
Sbjct: 2026 CAKGGPLSPRKDAGRAKDRKDPRKKKKGKEAGPGAGLPPPRAPALPSEARAPHASSLTAA 2085
Query: 127 ETHGQAKAKSGWLK 140
+ +AKAK +K
Sbjct: 2086 K-RSKAKAKGKEVK 2098
Score = 28.9 bits (63), Expect = 6.3
Identities = 17/48 (35%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 78 PEPCGRGAPAGGAGRATDKEAGPAAG-----LEAPRSGGSGAAWGPHL 120
P CG+ +P GG G + A +AG P SGG A G L
Sbjct: 604 PGGCGKKSPFGGLGTMKPEPAPTSAGASRAQARLPHSGGPAAGGGRQL 651
>gi|4505531 oxysterol binding protein [Homo sapiens]
Length = 807
Score = 33.9 bits (76), Expect = 0.20
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 3/61 (4%)
Query: 82 GRGAPAGGAGRATDKEAGPAAGLEAPRSGG---SGAAWGPHLWAAAAAETHGQAKAKSGW 138
GRG G+G A+ AAG P +GG +G A P + + G A+ GW
Sbjct: 35 GRGDAGPGSGAASGTVVAAAAGGPGPGAGGVAAAGPAPAPPTGGSGGSGAGGSGSAREGW 94
Query: 139 L 139
L
Sbjct: 95 L 95
>gi|91208420 bassoon protein [Homo sapiens]
Length = 3926
Score = 33.1 bits (74), Expect = 0.33
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 53 PEASSPRAP--PSHSQQEEAAMNMKD--VPEPCGRGAPAGGAGRATDKEAGPAAGLEAPR 108
P A P P P + +EE + E G APA AG+ +A P
Sbjct: 2291 PGAGGPSRPEMPVGAAREEPLPTTTPAAIKEAAGAPAPAPLAGQKPPADAAPG------- 2343
Query: 109 SGGSGAAWGPHLWAAAAAETHGQAKAKSGWLKPYYFIELMESRKDITNQEEL--WKMKPR 166
GGSGA P A++ Q K + L+ +E + + QEEL +++ +
Sbjct: 2344 -GGSGALSRPGFEKEEASQEERQRKQQEQLLQLERERVELEKLRQLRLQEELERERVELQ 2402
Query: 167 RNLEEDDYLVKVQQNKEDAWIEHDVWRME 195
R+ EE+ LV+ ++ +E I+H V + +
Sbjct: 2403 RHREEEQLLVQ-RELQELQTIKHHVLQQQ 2430
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 33.1 bits (74), Expect = 0.33
Identities = 25/80 (31%), Positives = 30/80 (37%), Gaps = 8/80 (10%)
Query: 53 PEASSPRAPPSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRA-TDKEAGPAAGLEAPRSGG 111
P A P PP S Q+ A P G + GG G + A P G
Sbjct: 318 PPALPPEGPPEDSSQDLA-------PNSVGAASTGGGTGGTHPNTPTATTANNPLPPGGD 370
Query: 112 SGAAWGPHLWAAAAAETHGQ 131
+A GP L AAA +GQ
Sbjct: 371 PSSAPGPALLGEAAAPGNGQ 390
>gi|33239445 eukaryotic translation initiation factor 3, subunit 9
eta, 116kDa [Homo sapiens]
Length = 814
Score = 33.1 bits (74), Expect = 0.33
Identities = 21/72 (29%), Positives = 31/72 (43%), Gaps = 5/72 (6%)
Query: 52 LPEASSPRAPPSHSQQEEAAMNMKDVPEPCGRGAPAGGAGRATDK-----EAGPAAGLEA 106
+PEA+ RA P Q + + P G GAP A+ + EAGP + +
Sbjct: 9 VPEAAEERAEPGQQQPAAEPPPAEGLLRPAGPGAPEAAGTEASSEEVGIAEAGPESEVRT 68
Query: 107 PRSGGSGAAWGP 118
+ + AA GP
Sbjct: 69 EPAAEAEAASGP 80
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.133 0.427
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,913,610
Number of Sequences: 37866
Number of extensions: 685253
Number of successful extensions: 3870
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 121
Number of HSP's that attempted gapping in prelim test: 3635
Number of HSP's gapped (non-prelim): 334
length of query: 317
length of database: 18,247,518
effective HSP length: 102
effective length of query: 215
effective length of database: 14,385,186
effective search space: 3092814990
effective search space used: 3092814990
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.