Guide to the Human Genome
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Name: STEAP4 Sequence: fasta or formatted (459aa) NCBI GI: 100815815
Description:

tumor necrosis factor, alpha-induced protein 9

Referenced in:

Prostate
TNF and Related Signals

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.8         31           2
 C cysteine            2.2         10           1
 D aspartate           3.1         14           1
 E glutamate           3.5         16           1
 F phenylalanine       5.4         25           2
 G glycine             5.9         27           2
 H histidine           1.7          8           1
 I isoleucine          7.0         32           4
 K lysine              5.0         23           2
 L leucine            13.7         63           2
 M methionine          2.2         10           1
 N asparagine          4.1         19           2
 P proline             4.6         21           1
 Q glutamine           3.1         14           1
 R arginine            5.2         24           2
 S serine              6.5         30           2
 T threonine           5.4         25           2
 V valine              7.8         36           2
 W tryptophan          2.0          9           1
 Y tyrosine            4.8         22           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   tumor necrosis factor, alpha-induced protein 9 [Hom... 
STEAP2                0.467   six transmembrane epithelial antigen of the prostat...
STEAP2                0.467   six transmembrane epithelial antigen of the prostat...
STEAP2                0.438   six transmembrane epithelial antigen of the prostat...
STEAP3                0.433   dudulin 2 isoform b 
STEAP3                0.433   dudulin 2 isoform a 
STEAP3                0.433   dudulin 2 isoform b 
STEAP1                0.244   six transmembrane epithelial antigen of the prostate ...
MGC87042              0.176   PREDICTED: similar to Six transmembrane epithelial ...
MGC87042              0.176   PREDICTED: hypothetical protein LOC256227 
LOC100290317          0.099   PREDICTED: hypothetical protein XP_002346944 
SF3B3                 0.008   splicing factor 3b, subunit 3 
MRGPRX3               0.008   MAS-related GPR, member X3 
ERCC6                 0.006   excision repair cross-complementing rodent repair def...
TRRAP                 0.006   transformation/transcription domain-associated protei...
OR2AG2                0.006   olfactory receptor, family 2, subfamily AG, member 2...
SLC5A1                0.006   solute carrier family 5 (sodium/glucose cotransporter...
GPR65                 0.004   G protein-coupled receptor 65 
MRGPRX1               0.004   MAS-related GPR, member X1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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