Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239748909
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239748909 PREDICTED: chromosome 6 open reading frame 163
[Homo sapiens]
(203 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239754362 PREDICTED: chromosome 6 open reading frame 163 [Hom... 399 e-112
gi|239748909 PREDICTED: chromosome 6 open reading frame 163 [Hom... 399 e-112
gi|239742933 PREDICTED: hypothetical protein LOC206412 [Homo sap... 399 e-112
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 45 6e-05
gi|115527097 CDC42-binding protein kinase beta [Homo sapiens] 42 3e-04
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 42 4e-04
gi|21735548 centrosomal protein 2 [Homo sapiens] 42 4e-04
gi|70980531 GGA binding partner [Homo sapiens] 42 4e-04
gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo s... 41 8e-04
gi|115648142 centrosomal protein 164kDa [Homo sapiens] 40 0.001
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 40 0.001
gi|221219020 NYD-SP11 protein [Homo sapiens] 40 0.002
gi|34878904 synaptonemal complex protein 1 [Homo sapiens] 39 0.002
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 39 0.002
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 39 0.004
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 39 0.004
gi|41322919 plectin 1 isoform 8 [Homo sapiens] 39 0.004
gi|41322910 plectin 1 isoform 7 [Homo sapiens] 39 0.004
gi|41322916 plectin 1 isoform 6 [Homo sapiens] 39 0.004
gi|41322908 plectin 1 isoform 3 [Homo sapiens] 39 0.004
gi|41322912 plectin 1 isoform 2 [Homo sapiens] 39 0.004
gi|47607492 plectin 1 isoform 1 [Homo sapiens] 39 0.004
gi|31982906 cingulin-like 1 [Homo sapiens] 38 0.005
gi|134152708 arginine and glutamate rich 1 [Homo sapiens] 38 0.005
gi|4505101 microtubule-associated protein 7 [Homo sapiens] 38 0.007
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens] 37 0.009
gi|41281453 serine/threonine kinase 2 [Homo sapiens] 37 0.009
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 37 0.012
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 37 0.012
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 37 0.012
>gi|239754362 PREDICTED: chromosome 6 open reading frame 163 [Homo
sapiens]
Length = 203
Score = 399 bits (1025), Expect = e-112
Identities = 203/203 (100%), Positives = 203/203 (100%)
Query: 1 MYQNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSK 60
MYQNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSK
Sbjct: 1 MYQNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSK 60
Query: 61 AVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQAT 120
AVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQAT
Sbjct: 61 AVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQAT 120
Query: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETRMAFQKYINYTFPKLSPGHAD 180
LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETRMAFQKYINYTFPKLSPGHAD
Sbjct: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETRMAFQKYINYTFPKLSPGHAD 180
Query: 181 FILPERKKTPSNLVIKENKTTLD 203
FILPERKKTPSNLVIKENKTTLD
Sbjct: 181 FILPERKKTPSNLVIKENKTTLD 203
>gi|239748909 PREDICTED: chromosome 6 open reading frame 163 [Homo
sapiens]
Length = 203
Score = 399 bits (1025), Expect = e-112
Identities = 203/203 (100%), Positives = 203/203 (100%)
Query: 1 MYQNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSK 60
MYQNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSK
Sbjct: 1 MYQNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSK 60
Query: 61 AVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQAT 120
AVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQAT
Sbjct: 61 AVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQAT 120
Query: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETRMAFQKYINYTFPKLSPGHAD 180
LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETRMAFQKYINYTFPKLSPGHAD
Sbjct: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETRMAFQKYINYTFPKLSPGHAD 180
Query: 181 FILPERKKTPSNLVIKENKTTLD 203
FILPERKKTPSNLVIKENKTTLD
Sbjct: 181 FILPERKKTPSNLVIKENKTTLD 203
>gi|239742933 PREDICTED: hypothetical protein LOC206412 [Homo
sapiens]
Length = 203
Score = 399 bits (1025), Expect = e-112
Identities = 203/203 (100%), Positives = 203/203 (100%)
Query: 1 MYQNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSK 60
MYQNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSK
Sbjct: 1 MYQNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSK 60
Query: 61 AVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQAT 120
AVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQAT
Sbjct: 61 AVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQAT 120
Query: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETRMAFQKYINYTFPKLSPGHAD 180
LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETRMAFQKYINYTFPKLSPGHAD
Sbjct: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETRMAFQKYINYTFPKLSPGHAD 180
Query: 181 FILPERKKTPSNLVIKENKTTLD 203
FILPERKKTPSNLVIKENKTTLD
Sbjct: 181 FILPERKKTPSNLVIKENKTTLD 203
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 44.7 bits (104), Expect = 6e-05
Identities = 35/148 (23%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 6 DDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEI 65
+D + LA + VH ++ ++ + +E R E + A + K+KA++ +
Sbjct: 328 EDHERTRRLAEAEMHVHHLESLLEQKEKEN----SMLREEMHRRFENAPDSAKTKALQTV 383
Query: 66 VNTGVTVIKDEK-TSVARLMREKEHEMSILYG---IAQRQRQEEVQ--EVLQEAEKTHQA 119
+ +KD K +S+ R +R+ E E+ +L ++ +R+EE++ EV + K +
Sbjct: 384 IE-----MKDSKISSMERGLRDLEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKN 438
Query: 120 TLGNMMDKLANTQGELLSIAKQLGIMTN 147
+G + +L+ ELL++ +L +TN
Sbjct: 439 KIGQVKQELSRKDTELLALQTKLETLTN 466
Score = 36.2 bits (82), Expect = 0.020
Identities = 28/129 (21%), Positives = 63/129 (48%), Gaps = 9/129 (6%)
Query: 12 EHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIVNTGVT 71
E LA ++R + R++ REK E ++ + + + + ++ Q + +E +
Sbjct: 592 EALAEKERTIERLKEQRDRDEREKQEEIDNYKKDLKDLKEKVSLLQGDLSEKE---ASLL 648
Query: 72 VIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQATL-----GNMMD 126
+K+ +S+A +K+ + L IA Q++EE ++ + +K H+A L M D
Sbjct: 649 DLKEHASSLASSGLKKDSRLKTLE-IALEQKKEECLKMESQLKKAHEAALEARASPEMSD 707
Query: 127 KLANTQGEL 135
++ + + E+
Sbjct: 708 RIQHLEREI 716
>gi|115527097 CDC42-binding protein kinase beta [Homo sapiens]
Length = 1711
Score = 42.4 bits (98), Expect = 3e-04
Identities = 33/134 (24%), Positives = 70/134 (52%), Gaps = 11/134 (8%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAV 62
Q +D +R +Q V R ++ E H++ VEA E+ +++ + + ++A Q Q+ A+
Sbjct: 519 QEREDSTQRLRGLEKQHRVVRQEK--EELHKQLVEASERLKSQAKEL-KDAHQ-QRKLAL 574
Query: 63 EEI--VNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQAT 120
+E +N + ++ +K V+R +R+KE EM + Q+ + +++ ++ AEK +
Sbjct: 575 QEFSELNERMAELRAQKQKVSRQLRDKEEEMEV-----ATQKVDAMRQEMRRAEKLRKEL 629
Query: 121 LGNMMDKLANTQGE 134
+ D +A E
Sbjct: 630 EAQLDDAVAEASKE 643
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 42.0 bits (97), Expect = 4e-04
Identities = 45/182 (24%), Positives = 81/182 (44%), Gaps = 24/182 (13%)
Query: 6 DDEMKREHLAAEQR-MVHRIQRIMMECHREK------------VEAVEKARAEERHIA-- 50
++E + +HL AE++ M IQ + + E+ EA K EE+ I
Sbjct: 926 EEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLEEEQIILED 985
Query: 51 QEAIQAQKSKAVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVL 110
Q A++ K +E+ + T + +E+ L + K +++ + +R R+EE Q
Sbjct: 986 QNCKLAKEKKLLEDRIAEFTTNLTEEEEKSKSLAKLKNKHEAMITDLEERLRREEKQR-- 1043
Query: 111 QEAEKTHQATLGN---MMDKLANTQGELLSIAKQLGIMTNWKDF----LEEELQETRMAF 163
QE EKT + G+ + D++A Q ++ + QL +EEE + MA
Sbjct: 1044 QELEKTRRKLEGDSTDLSDQIAELQAQIAELKMQLAKKEEELQAALARVEEEAAQKNMAL 1103
Query: 164 QK 165
+K
Sbjct: 1104 KK 1105
Score = 37.4 bits (85), Expect = 0.009
Identities = 39/182 (21%), Positives = 87/182 (47%), Gaps = 15/182 (8%)
Query: 8 EMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQ-EAIQAQ---KSKAVE 63
+++ + LAAE R+ ++ + + EK++ E+ +AE A+ E ++A+ K + +E
Sbjct: 856 KVREKQLAAENRLTE-METLQSQLMAEKLQLQEQLQAETELCAEAEELRARLTAKKQELE 914
Query: 64 EIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEE-VQEVLQEAEKTHQATLG 122
EI + +++E+ L EK+ + + ++ +EE ++ LQ + T +A L
Sbjct: 915 EICHDLEARVEEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLK 974
Query: 123 NMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQE--TRMAFQKYINYTFPKLSPGHAD 180
+ ++ + + +AK+ K LE+ + E T + ++ + + KL H
Sbjct: 975 KLEEEQIILEDQNCKLAKE-------KKLLEDRIAEFTTNLTEEEEKSKSLAKLKNKHEA 1027
Query: 181 FI 182
I
Sbjct: 1028 MI 1029
Score = 31.6 bits (70), Expect = 0.48
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 30/164 (18%)
Query: 8 EMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQ-----EAIQAQKSKAV 62
E+K + E+ + + R+ E ++ + A++K R E I++ E+ +A ++KA
Sbjct: 1073 ELKMQLAKKEEELQAALARVEEEAAQKNM-ALKKIRELESQISELQEDLESERASRNKAE 1131
Query: 63 EEIVNTGV------TVIKDEKTSVA---RLMREKEHEMSILYGIAQRQRQEEVQEVLQEA 113
++ + G T ++D S A L ++E E++IL ++ L+E
Sbjct: 1132 KQKRDLGEELEALKTELEDTLDSTAAQQELRSKREQEVNIL------------KKTLEEE 1179
Query: 114 EKTHQATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQ 157
KTH+A + M K + EL A+QL K LE+ Q
Sbjct: 1180 AKTHEAQIQEMRQKHSQAVEEL---AEQLEQTKRVKANLEKAKQ 1220
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 42.0 bits (97), Expect = 4e-04
Identities = 50/210 (23%), Positives = 96/210 (45%), Gaps = 33/210 (15%)
Query: 7 DEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIV 66
+ ++RE + E R+ + + ++EA++ R EER A+ A+ + + +E V
Sbjct: 878 ESLEREKMELEMRLKEQ---------QTEMEAIQAQREEERTQAESALCQMQLETEKERV 928
Query: 67 NTGVTVIKDEK------TSVARLMRE------KEHEMSILYGIAQRQRQEEVQEVLQEAE 114
+ T+++ +K + RL ++ KE E + GI Q Q Q E Q L+EA
Sbjct: 929 SLLETLLQTQKELADASQQLERLRQDMKVQKLKEQETT---GILQTQLQ-EAQRELKEAA 984
Query: 115 KTHQATLGNMMDKLA-------NTQGELLSIAKQLGIMTNWKDFLEEELQETRMAFQKYI 167
+ H+ L + ++ + + Q ++ + QL + + +E+E+QE Q+Y
Sbjct: 985 RQHRDDLAALQEESSSLLQDKMDLQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEY- 1043
Query: 168 NYTFPKLSPGHADFILPERKKTPSNLVIKE 197
N +L A L +K LV++E
Sbjct: 1044 NRIQKELEREKASLTLSLMEKEQRLLVLQE 1073
Score = 37.0 bits (84), Expect = 0.012
Identities = 33/168 (19%), Positives = 73/168 (43%), Gaps = 17/168 (10%)
Query: 5 MDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEE 64
+D E + + L A+ +H ++ RE E ++ +++ I E +Q QK ++
Sbjct: 1595 LDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQI--EELQRQKEHLTQD 1652
Query: 65 IVNTG---------VTVIKDEKTSVARLMREKEHEMSILYG------IAQRQRQEEVQEV 109
+ + V++D++T +++ E ++ + QRQ +E E
Sbjct: 1653 LERRDQELMLQKERIQVLEDQRTRQTKILEEDLEQIKLSLRERGRELTTQRQLMQERAEE 1712
Query: 110 LQEAEKTHQATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQ 157
+ K + +L +M L + + E+ + + + KD LE++LQ
Sbjct: 1713 GKGPSKAQRGSLEHMKLILRDKEKEVECQQEHIHELQELKDQLEQQLQ 1760
Score = 34.3 bits (77), Expect = 0.075
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 26/178 (14%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKAR-------------AEERHI 49
+ + +MK + L EQ +Q + E RE EA + R +++
Sbjct: 949 ERLRQDMKVQKLK-EQETTGILQTQLQEAQRELKEAARQHRDDLAALQEESSSLLQDKMD 1007
Query: 50 AQEAIQAQKSKAV-----EEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQE 104
Q+ ++ KS+ V + +V V E R+ +E E E + L +E
Sbjct: 1008 LQKQVEDLKSQLVAQDDSQRLVEQEVQEKLRETQEYNRIQKELEREKASL--TLSLMEKE 1065
Query: 105 EVQEVLQEAEKTHQATLGNMMDKLANTQGELLSIAKQLGIM-----TNWKDFLEEELQ 157
+ VLQEA+ Q L + + QGE ++ Q+ ++ DFL +E Q
Sbjct: 1066 QRLLVLQEADSIRQQELSALRQDMQEAQGEQKELSAQMELLRQEVKEKEADFLAQEAQ 1123
Score = 32.0 bits (71), Expect = 0.37
Identities = 32/158 (20%), Positives = 66/158 (41%), Gaps = 8/158 (5%)
Query: 8 EMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIVN 67
E ++EH+ Q + ++++ + HR+ E E+ I Q Q+++ E+
Sbjct: 1739 ECQQEHIHELQELKDQLEQQLQGLHRKVGETSLLLSQREQEIVVLQQQLQEAREQGELKE 1798
Query: 68 TGVTVIKDEKTSVARLMREKEHEMSIL-----YGIAQRQRQEEVQEVLQEAEKTHQATLG 122
+ DE R + +++ E+ L Q +R +E + LQ A + TL
Sbjct: 1799 QSLQSQLDE---AQRALAQRDQELEALQQEQQQAQGQEERVKEKADALQGALEQAHMTLK 1855
Query: 123 NMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETR 160
+L + + + + ++L + LEE L + R
Sbjct: 1856 ERHGELQDHKEQARRLEEELAVEGRRVQALEEVLGDLR 1893
Score = 31.2 bits (69), Expect = 0.63
Identities = 28/172 (16%), Positives = 80/172 (46%), Gaps = 11/172 (6%)
Query: 2 YQNMDDEMKREHLAAEQRMVHRIQR--IMMECHREKVEAVEKARAEERHIAQEAIQAQKS 59
+Q ++ E K + + +++ V +++ + +EC ++E ++ + +E +
Sbjct: 1526 HQLLELEKKDQMIESQRGQVQDLKKQLVTLECLALELEENHHKMECQQKLIKEL---EGQ 1582
Query: 60 KAVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTH-- 117
+ + + T +T+ +E++ + + H++ + R+ QE QEV + E+
Sbjct: 1583 RETQRVALTHLTLDLEERSQELQAQSSQIHDLESHSTVLARELQERDQEVKSQREQIEEL 1642
Query: 118 QATLGNMMDKLANTQGELLSIAKQLGIM----TNWKDFLEEELQETRMAFQK 165
Q ++ L EL+ +++ ++ T LEE+L++ +++ ++
Sbjct: 1643 QRQKEHLTQDLERRDQELMLQKERIQVLEDQRTRQTKILEEDLEQIKLSLRE 1694
Score = 30.4 bits (67), Expect = 1.1
Identities = 38/176 (21%), Positives = 78/176 (44%), Gaps = 22/176 (12%)
Query: 5 MDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKAR---------AEERHIA----Q 51
+++ + + + Q+++ + C R +EA E+AR AE+R A
Sbjct: 604 LNEALALDKVGLNQQLLQLEEENQSVCSR--MEAAEQARNALQVDLAEAEKRREALWEKN 661
Query: 52 EAIQAQKSKAVEE--IVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQE--EVQ 107
++AQ KA E + + I++EK + + + E H+ ++ QE +
Sbjct: 662 THLEAQLQKAEEAGAELQADLRDIQEEKEEIQKKLSESRHQQEAATTQLEQLHQEAKRQE 721
Query: 108 EVLQEAEKTHQATL---GNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETR 160
EVL A + +A + + +L + + +A+QL +++ K+ LE L E +
Sbjct: 722 EVLARAVQEKEALVREKAALEVRLQAVERDRQDLAEQLQGLSSAKELLESSLFEAQ 777
>gi|70980531 GGA binding partner [Homo sapiens]
Length = 441
Score = 42.0 bits (97), Expect = 4e-04
Identities = 26/119 (21%), Positives = 59/119 (49%), Gaps = 1/119 (0%)
Query: 4 NMDDEMKREHLAAEQRMV-HRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAV 62
N + E L E+ ++ +I+ +++ +E+ E +EK EER +EA+ +
Sbjct: 252 NAQHQRLLEMLDTEKELLKEKIKEALIQQSQEQKEILEKCLEEERQRNKEALVSAAKLEK 311
Query: 63 EEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQATL 121
E + + + V+++E+ ++ + E+ + Q + +E+Q+ +QE K Q T+
Sbjct: 312 EAVKDAVLKVVEEERKNLEKAHAEERELWKTEHAKDQEKVSQEIQKAIQEQRKISQETV 370
Score = 32.3 bits (72), Expect = 0.28
Identities = 19/92 (20%), Positives = 44/92 (47%), Gaps = 4/92 (4%)
Query: 10 KREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIVNTG 69
K EH ++++ IQ+ + E + E V+ A EE+ +++A++ + +E++
Sbjct: 341 KTEHAKDQEKVSQEIQKAIQEQRKISQETVKAAIIEEQKRSEKAVEEAVKRTRDELIE-- 398
Query: 70 VTVIKDEKTSVARLMREKEHEMSILYGIAQRQ 101
IK++K + + + + AQ+Q
Sbjct: 399 --YIKEQKRLDQVIRQRSLSSLELFLSCAQKQ 428
>gi|30089962 CDC42-binding protein kinase alpha isoform B [Homo
sapiens]
Length = 1719
Score = 40.8 bits (94), Expect = 8e-04
Identities = 26/119 (21%), Positives = 63/119 (52%), Gaps = 14/119 (11%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAV 62
Q +DD ++ + A ++ + +Q+ + ++E V+A E+ + + + + Q+ A+
Sbjct: 521 QELDDAFRQ--IKAYEKQIKTLQQEREDLNKELVQASERLKNQSKELKDA--HCQRKLAM 576
Query: 63 EEI--VNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQA 119
+E +N +T + +K +AR +R+KE E+ ++ ++V+ + QE +T +A
Sbjct: 577 QEFMEINERLTELHTQKQKLARHVRDKEEEVDLV--------MQKVESLRQELRRTERA 627
>gi|115648142 centrosomal protein 164kDa [Homo sapiens]
Length = 1460
Score = 40.4 bits (93), Expect = 0.001
Identities = 33/122 (27%), Positives = 62/122 (50%), Gaps = 18/122 (14%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAV 62
+ ++ + K E + EQ+ R M+E +E++EA EK+ Q A+ A K KA+
Sbjct: 701 EELESQQKAERASLEQK-----NRQMLEQLKEEIEASEKSE-------QAALNAAKEKAL 748
Query: 63 EEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEV---QEVLQEAEKTHQA 119
+++ + + K +VA L +E E+ L + + +E V Q+ +QEA++ +A
Sbjct: 749 QQLRE---QLEGERKEAVATLEKEHSAELERLCSSLEAKHREVVSSLQKKIQEAQQKEEA 805
Query: 120 TL 121
L
Sbjct: 806 QL 807
Score = 32.7 bits (73), Expect = 0.22
Identities = 29/114 (25%), Positives = 57/114 (50%), Gaps = 11/114 (9%)
Query: 9 MKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKA---VEEI 65
+++EH A +R+ ++ HRE V +++K E AQ+ +AQ K VE
Sbjct: 766 LEKEHSAELERLCSSLEAK----HREVVSSLQKKIQE----AQQKEEAQLQKCLGQVEHR 817
Query: 66 VNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQA 119
V+ + + ++ L+REK E+ + + +EE Q+V+ +A + ++A
Sbjct: 818 VHQKSYHVAGYEHELSSLLREKRQEVEGEHERRLDKMKEEHQQVMAKAREQYEA 871
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 40.0 bits (92), Expect = 0.001
Identities = 34/152 (22%), Positives = 70/152 (46%), Gaps = 9/152 (5%)
Query: 11 REHLAAEQRMVHRIQRIMMECHRE-KVEAVEKARAEERHIAQEAIQAQKSKAVEEIVNTG 69
+E ++A +R V ++ + E ++ ++ A+A E +A A +++ +
Sbjct: 2032 QEKISALERTVKALEFVQTESQKDLEITKENLAQAVEHRKKAQAELASFKVLLDDTQSEA 2091
Query: 70 VTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQATLGNMMDKLA 129
V+ D L KE S + +Q+ E+++ L++AE+ H NM +KL
Sbjct: 2092 ARVLADNLKLKKELQSNKESVKSQM-----KQKDEDLERRLEQAEEKHLKEKKNMQEKLD 2146
Query: 130 NTQGELLSIAKQLG---IMTNWKDFLEEELQE 158
+ E + + + +G + N KD ++LQE
Sbjct: 2147 ALRREKVHLEETIGEIQVTLNKKDKEVQQLQE 2178
Score = 33.9 bits (76), Expect = 0.097
Identities = 29/139 (20%), Positives = 62/139 (44%), Gaps = 10/139 (7%)
Query: 23 RIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKS-KAVEEIVNTGVTVIKDEKTSVA 81
RIQ ++ +EK E K R+ E + + Q Q++ + +EE+ K ++ +
Sbjct: 1631 RIQHVVEAVRQEKQELYGKLRSTEANKKETEKQLQEAEQEMEEMKEKMRKFAKSKQQKIL 1690
Query: 82 RLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQATLGNMMDKLANTQGELLSIAKQ 141
L E + R + +E +T ++ +M ++L + E +++K+
Sbjct: 1691 ELEEENDR---------LRAEVHPAGDTAKECMETLLSSNASMKEELERVKMEYETLSKK 1741
Query: 142 LGIMTNWKDFLEEELQETR 160
+ + KD L EE+Q+ +
Sbjct: 1742 FQSLMSEKDSLSEEVQDLK 1760
Score = 28.5 bits (62), Expect = 4.1
Identities = 37/184 (20%), Positives = 76/184 (41%), Gaps = 19/184 (10%)
Query: 10 KREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIVNTG 69
+R+ L ++ + + + + + + ++ E R +R + E+ A + E+I +
Sbjct: 745 ERDQLLSQVKELSMVTELRAQVKQLEMNLAEAER--QRRLDYESQTAHDNLLTEQIHSLS 802
Query: 70 VTVIKDEKTSVARLMREKEH------EMSILYGIAQRQRQEEVQEVLQEAE-------KT 116
+ K + + L E + E S L Q Q Q + EVL+ AE K
Sbjct: 803 IEA-KSKDVKIEVLQNELDDVQLQFSEQSTLIRSLQSQLQNKESEVLEGAERVRHISSKV 861
Query: 117 HQATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETRMAF---QKYINYTFPK 173
+ + +L T+ + L + K+ + T + E++ Q T ++F +K + K
Sbjct: 862 EELSQALSQKELEITKMDQLLLEKKRDVETLQQTIEEKDQQVTEISFSMTEKMVQLNEEK 921
Query: 174 LSPG 177
S G
Sbjct: 922 FSLG 925
Score = 28.1 bits (61), Expect = 5.3
Identities = 34/151 (22%), Positives = 67/151 (44%), Gaps = 16/151 (10%)
Query: 12 EHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIVNTGVT 71
E + EQ H E EK+ K + +E+ +QAQ ++A E T
Sbjct: 125 EPQSEEQLSKHDKSSTEEEMEIEKI----KHKLQEKEELISTLQAQLTQAQAEQPAQSST 180
Query: 72 VIKDEKTSVARLMREKEHEMSILYG-IAQRQRQEEVQEVLQEAEKTHQATLGNMMDKLAN 130
+ +E + + ++EKE +S L ++Q Q ++ Q+V++E + + ++
Sbjct: 181 EM-EEFVMMKQQLQEKEEFISTLQAQLSQTQAEQAAQQVVREKDARFET-------QVRL 232
Query: 131 TQGELLSIAKQLGIMTNWKD---FLEEELQE 158
+ ELL + Q + T + L+ +L+E
Sbjct: 233 HEDELLQLVTQADVETEMQQKLRVLQRKLEE 263
>gi|221219020 NYD-SP11 protein [Homo sapiens]
Length = 2873
Score = 39.7 bits (91), Expect = 0.002
Identities = 43/166 (25%), Positives = 79/166 (47%), Gaps = 24/166 (14%)
Query: 5 MDDEMKREHLAAEQRMVHRIQRIMME-----CHREKVEAVEKARAEERHIAQE---AIQA 56
+++E+ RE EQ++ + I E HR++ A +K EER +AQE Q
Sbjct: 1546 LEEEVSREGEEKEQQVTEEQRHIQEEHKWARIHRKRARAEKKRAQEERKLAQEEEKLAQE 1605
Query: 57 QKSKAVEE--IVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE 114
++ A EE + V + +D++ + + E + +AQR +++ QEAE
Sbjct: 1606 ERQLAQEERKLAQAYVKITQDDREMAQAEGKFAQKEET----LAQRG-----EKLSQEAE 1656
Query: 115 KTHQ--ATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQE 158
K Q L +K+A + +L AK+ G + K+ L ++++E
Sbjct: 1657 KLAQKRKKLAKKWEKVAREEEKL---AKKGGKLAEVKNILAQKVEE 1699
Score = 27.7 bits (60), Expect = 7.0
Identities = 37/145 (25%), Positives = 65/145 (44%), Gaps = 29/145 (20%)
Query: 17 EQRMVHRIQRIMMECHREKVEAVEK-ARAEERHIAQEAIQAQKSKAVEEIVNTGVTVIKD 75
++R V +I+R M + R+ E VE+ A EE+ + QE ++
Sbjct: 1409 KERKVGKIKREMTKEERDMSEEVEEMATLEEKVVKQEG-----------------KLVMI 1451
Query: 76 EKTSVARLMREKEHEMSILYGIAQRQ----RQEEVQEVLQEAEKTHQATLGNMMDKLANT 131
E+T + ++ E ++G ++ ++E + +LQE EK HQA +KL +
Sbjct: 1452 ERTPSWQDWKKAWDEWKQVHGETRKSWKAWKEEWEKRLLQEEEKLHQAG-----EKL-SP 1505
Query: 132 QGELLSIAKQLGIMTNWKDFLEEEL 156
+ E+L K+L WK E L
Sbjct: 1506 EEEMLQEDKKLK-WEEWKQVWENML 1529
>gi|34878904 synaptonemal complex protein 1 [Homo sapiens]
Length = 976
Score = 39.3 bits (90), Expect = 0.002
Identities = 39/166 (23%), Positives = 78/166 (46%), Gaps = 28/166 (16%)
Query: 1 MYQNMDDEMKREHLAAEQRMVHRIQRIMMECHREKV------EAVEKARAEERHIAQEAI 54
+Y+ ++++ E +A+Q+ E +K+ E VEKA+ IA EA+
Sbjct: 638 VYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENLLEEVEKAKV----IADEAV 693
Query: 55 QAQKS--KAVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQE 112
+ QK K + + V +++ K +++ E++ E+ G+ + + QE+
Sbjct: 694 KLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSEL----GLYKSKEQEQ------- 742
Query: 113 AEKTHQATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQE 158
+ ++ +L+N + ELLS+ KQL I K+ L+ E +E
Sbjct: 743 -----SSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKREAKE 783
Score = 28.5 bits (62), Expect = 4.1
Identities = 36/160 (22%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 1 MYQNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSK 60
+Y ++++ +++ A E+ V + + +E H + E EK + E+ +E
Sbjct: 210 VYMDLNNNIEKMITAFEELRV-QAENSRLEMHFKLKEDYEKIQHLEQEYKKE-------- 260
Query: 61 AVEEIVNTGVTVIKDEKTSVARLM---REKEHEMSILYGIAQRQRQEEVQEVLQEAEKTH 117
I D++ V+ L+ EKE++M L + + R + Q L+E K
Sbjct: 261 ------------INDKEKQVSLLLIQITEKENKMKDLTFLLEESRDKVNQ--LEEKTKLQ 306
Query: 118 QATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQ 157
L ++K + EL I L + + LEE+LQ
Sbjct: 307 SENLKQSIEKQHHLTKELEDIKVSLQRSVSTQKALEEDLQ 346
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 39.3 bits (90), Expect = 0.002
Identities = 39/128 (30%), Positives = 56/128 (43%), Gaps = 15/128 (11%)
Query: 6 DDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEI 65
D M+ E LA E R +R RE+ EA EKA+AE+ QE +Q QK +A
Sbjct: 628 DKRMREEQLAREAEA--RAEREAEARRREEQEAREKAQAEQEE--QERLQKQKEEAEAR- 682
Query: 66 VNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQATLGNMM 125
E+ RL REK + +R+R EE+ + +++E + T
Sbjct: 683 --------SREEAERQRLEREKHFQQQEQERQERRKRLEEIMKRTRKSEVSE--TKQKQD 732
Query: 126 DKLANTQG 133
K AN G
Sbjct: 733 SKEANANG 740
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAE-ERHIAQEAIQAQKSKA 61
Q + E+++ L EQ ++ ++ R E R E E+AR + ER AQ Q ++++
Sbjct: 2059 QQKEQELQQT-LQQEQSVLDQL-RGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAER 2116
Query: 62 VEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE-KTHQAT 120
+++ + + +L +E E E + AQ ++ Q+ +AE + H+
Sbjct: 2117 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARR---AQAEQAALRQKQAADAEMEKHKKF 2173
Query: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETR 160
+ + A + EL ++ QL + K+ L+EELQ +
Sbjct: 2174 AEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLK 2213
Score = 29.6 bits (65), Expect = 1.8
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Query: 7 DEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIV 66
+E ++ LAAE+ + + + E R K + E R ER + A Q Q +
Sbjct: 1987 EERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLA------- 2039
Query: 67 NTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE 114
++ + RL E++ + A +Q+++E+Q+ LQ+ +
Sbjct: 2040 ---------QEAAQKRLQAEEK-----AHAFAVQQKEQELQQTLQQEQ 2073
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAE-ERHIAQEAIQAQKSKA 61
Q + E+++ L EQ ++ ++ R E R E E+AR + ER AQ Q ++++
Sbjct: 2063 QQKEQELQQT-LQQEQSVLDQL-RGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAER 2120
Query: 62 VEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE-KTHQAT 120
+++ + + +L +E E E + AQ ++ Q+ +AE + H+
Sbjct: 2121 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARR---AQAEQAALRQKQAADAEMEKHKKF 2177
Query: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETR 160
+ + A + EL ++ QL + K+ L+EELQ +
Sbjct: 2178 AEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLK 2217
Score = 29.6 bits (65), Expect = 1.8
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Query: 7 DEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIV 66
+E ++ LAAE+ + + + E R K + E R ER + A Q Q +
Sbjct: 1991 EERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLA------- 2043
Query: 67 NTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE 114
++ + RL E++ + A +Q+++E+Q+ LQ+ +
Sbjct: 2044 ---------QEAAQKRLQAEEK-----AHAFAVQQKEQELQQTLQQEQ 2077
>gi|41322919 plectin 1 isoform 8 [Homo sapiens]
Length = 4547
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAE-ERHIAQEAIQAQKSKA 61
Q + E+++ L EQ ++ ++ R E R E E+AR + ER AQ Q ++++
Sbjct: 2059 QQKEQELQQT-LQQEQSVLDQL-RGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAER 2116
Query: 62 VEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE-KTHQAT 120
+++ + + +L +E E E + AQ ++ Q+ +AE + H+
Sbjct: 2117 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARR---AQAEQAALRQKQAADAEMEKHKKF 2173
Query: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETR 160
+ + A + EL ++ QL + K+ L+EELQ +
Sbjct: 2174 AEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLK 2213
Score = 29.6 bits (65), Expect = 1.8
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Query: 7 DEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIV 66
+E ++ LAAE+ + + + E R K + E R ER + A Q Q +
Sbjct: 1987 EERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLA------- 2039
Query: 67 NTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE 114
++ + RL E++ + A +Q+++E+Q+ LQ+ +
Sbjct: 2040 ---------QEAAQKRLQAEEK-----AHAFAVQQKEQELQQTLQQEQ 2073
>gi|41322910 plectin 1 isoform 7 [Homo sapiens]
Length = 4515
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAE-ERHIAQEAIQAQKSKA 61
Q + E+++ L EQ ++ ++ R E R E E+AR + ER AQ Q ++++
Sbjct: 2027 QQKEQELQQT-LQQEQSVLDQL-RGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAER 2084
Query: 62 VEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE-KTHQAT 120
+++ + + +L +E E E + AQ ++ Q+ +AE + H+
Sbjct: 2085 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARR---AQAEQAALRQKQAADAEMEKHKKF 2141
Query: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETR 160
+ + A + EL ++ QL + K+ L+EELQ +
Sbjct: 2142 AEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLK 2181
Score = 29.6 bits (65), Expect = 1.8
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Query: 7 DEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIV 66
+E ++ LAAE+ + + + E R K + E R ER + A Q Q +
Sbjct: 1955 EERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLA------- 2007
Query: 67 NTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE 114
++ + RL E++ + A +Q+++E+Q+ LQ+ +
Sbjct: 2008 ---------QEAAQKRLQAEEK-----AHAFAVQQKEQELQQTLQQEQ 2041
>gi|41322916 plectin 1 isoform 6 [Homo sapiens]
Length = 4684
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAE-ERHIAQEAIQAQKSKA 61
Q + E+++ L EQ ++ ++ R E R E E+AR + ER AQ Q ++++
Sbjct: 2196 QQKEQELQQT-LQQEQSVLDQL-RGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAER 2253
Query: 62 VEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE-KTHQAT 120
+++ + + +L +E E E + AQ ++ Q+ +AE + H+
Sbjct: 2254 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARR---AQAEQAALRQKQAADAEMEKHKKF 2310
Query: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETR 160
+ + A + EL ++ QL + K+ L+EELQ +
Sbjct: 2311 AEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLK 2350
Score = 29.6 bits (65), Expect = 1.8
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Query: 7 DEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIV 66
+E ++ LAAE+ + + + E R K + E R ER + A Q Q +
Sbjct: 2124 EERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLA------- 2176
Query: 67 NTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE 114
++ + RL E++ + A +Q+++E+Q+ LQ+ +
Sbjct: 2177 ---------QEAAQKRLQAEEK-----AHAFAVQQKEQELQQTLQQEQ 2210
>gi|41322908 plectin 1 isoform 3 [Homo sapiens]
Length = 4525
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAE-ERHIAQEAIQAQKSKA 61
Q + E+++ L EQ ++ ++ R E R E E+AR + ER AQ Q ++++
Sbjct: 2037 QQKEQELQQT-LQQEQSVLDQL-RGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAER 2094
Query: 62 VEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE-KTHQAT 120
+++ + + +L +E E E + AQ ++ Q+ +AE + H+
Sbjct: 2095 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARR---AQAEQAALRQKQAADAEMEKHKKF 2151
Query: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETR 160
+ + A + EL ++ QL + K+ L+EELQ +
Sbjct: 2152 AEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLK 2191
Score = 29.6 bits (65), Expect = 1.8
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Query: 7 DEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIV 66
+E ++ LAAE+ + + + E R K + E R ER + A Q Q +
Sbjct: 1965 EERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLA------- 2017
Query: 67 NTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE 114
++ + RL E++ + A +Q+++E+Q+ LQ+ +
Sbjct: 2018 ---------QEAAQKRLQAEEK-----AHAFAVQQKEQELQQTLQQEQ 2051
>gi|41322912 plectin 1 isoform 2 [Homo sapiens]
Length = 4533
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAE-ERHIAQEAIQAQKSKA 61
Q + E+++ L EQ ++ ++ R E R E E+AR + ER AQ Q ++++
Sbjct: 2045 QQKEQELQQT-LQQEQSVLDQL-RGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAER 2102
Query: 62 VEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE-KTHQAT 120
+++ + + +L +E E E + AQ ++ Q+ +AE + H+
Sbjct: 2103 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARR---AQAEQAALRQKQAADAEMEKHKKF 2159
Query: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETR 160
+ + A + EL ++ QL + K+ L+EELQ +
Sbjct: 2160 AEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLK 2199
Score = 29.6 bits (65), Expect = 1.8
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Query: 7 DEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIV 66
+E ++ LAAE+ + + + E R K + E R ER + A Q Q +
Sbjct: 1973 EERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLA------- 2025
Query: 67 NTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE 114
++ + RL E++ + A +Q+++E+Q+ LQ+ +
Sbjct: 2026 ---------QEAAQKRLQAEEK-----AHAFAVQQKEQELQQTLQQEQ 2059
>gi|47607492 plectin 1 isoform 1 [Homo sapiens]
Length = 4574
Score = 38.5 bits (88), Expect = 0.004
Identities = 38/160 (23%), Positives = 75/160 (46%), Gaps = 7/160 (4%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAE-ERHIAQEAIQAQKSKA 61
Q + E+++ L EQ ++ ++ R E R E E+AR + ER AQ Q ++++
Sbjct: 2086 QQKEQELQQT-LQQEQSVLDQL-RGEAEAARRAAEEAEEARVQAEREAAQSRRQVEEAER 2143
Query: 62 VEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE-KTHQAT 120
+++ + + +L +E E E + AQ ++ Q+ +AE + H+
Sbjct: 2144 LKQSAEEQAQARAQAQAAAEKLRKEAEQEAARR---AQAEQAALRQKQAADAEMEKHKKF 2200
Query: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETR 160
+ + A + EL ++ QL + K+ L+EELQ +
Sbjct: 2201 AEQTLRQKAQVEQELTTLRLQLEETDHQKNLLDEELQRLK 2240
Score = 29.6 bits (65), Expect = 1.8
Identities = 24/108 (22%), Positives = 48/108 (44%), Gaps = 21/108 (19%)
Query: 7 DEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIV 66
+E ++ LAAE+ + + + E R K + E R ER + A Q Q +
Sbjct: 2014 EERVQKSLAAEEEAARQRKAALEEVERLKAKVEEARRLRERAEQESARQLQLA------- 2066
Query: 67 NTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAE 114
++ + RL E++ + A +Q+++E+Q+ LQ+ +
Sbjct: 2067 ---------QEAAQKRLQAEEK-----AHAFAVQQKEQELQQTLQQEQ 2100
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 38.1 bits (87), Expect = 0.005
Identities = 41/179 (22%), Positives = 81/179 (45%), Gaps = 17/179 (9%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAV 62
QN D + + HL R + ME ++E ++ +EER A + ++ +
Sbjct: 1125 QNKDLKSRIIHLEGSYRSSKEGLVVQMEARIAELE--DRLESEERDRANLQLS---NRRL 1179
Query: 63 EEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEV--LQEAEKTHQAT 120
E V V + DE S+ +++ ++S+ +RQ +E +E+ L+ ++K Q
Sbjct: 1180 ERKVKELVMQVDDEHLSLT----DQKDQLSLRLKAMKRQVEEAEEEIDRLESSKKKLQRE 1235
Query: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETRMA------FQKYINYTFPK 173
L MD + QG+L S+ K L + L++ + ++ ++ ++YTF K
Sbjct: 1236 LEEQMDMNEHLQGQLNSMKKDLRLKKLPSKVLDDMDDDDDLSTDGGSLYEAPVSYTFSK 1294
>gi|134152708 arginine and glutamate rich 1 [Homo sapiens]
Length = 273
Score = 38.1 bits (87), Expect = 0.005
Identities = 43/180 (23%), Positives = 84/180 (46%), Gaps = 15/180 (8%)
Query: 4 NMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVE 63
++D++ KRE ++ R ++I + EK+ E AR E +A+ ++ + K +
Sbjct: 94 SLDEKQKREE-EEKKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKR-VEEELEKRKD 151
Query: 64 EIVNTGVTVIKD-----EKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQ 118
EI + +++ EK + L R+++ E++ AQ+ R+EE + +E E+ +
Sbjct: 152 EIEREVLRRVEEAKRIMEKQLLEELERQRQAELA-----AQKAREEEERAKREELERILE 206
Query: 119 ATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETRMAFQKYI---NYTFPKLS 175
+ + A E L I ++ + + LE+E Q + QK I + PKLS
Sbjct: 207 ENNRKIAEAQAKLAEEQLRIVEEQRKIHEERMKLEQERQRQQKEEQKIILGKGKSRPKLS 266
>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
Length = 749
Score = 37.7 bits (86), Expect = 0.007
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 17/122 (13%)
Query: 7 DEMKREHLA---AEQRMVHRIQ---RIMMECHREKVEAVEKARAEERHIAQ--EAIQAQK 58
+ KRE LA AE+R R + R+ E REK E +++ +AEER + + EA +AQ+
Sbjct: 508 ERQKREELAQRVAEERTTRREEESRRLEAEQAREKEEQLQR-QAEERALREREEAERAQR 566
Query: 59 SKAVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQ 118
K E V E+ R REK + + +++R EE+ + + E T +
Sbjct: 567 QKEEEARVR--------EEAERVRQEREKHFQREEQERLERKKRLEEIMKRTRRTEATDK 618
Query: 119 AT 120
T
Sbjct: 619 KT 620
Score = 36.2 bits (82), Expect = 0.020
Identities = 34/114 (29%), Positives = 58/114 (50%), Gaps = 20/114 (17%)
Query: 10 KREHLAAEQR-MVHRIQRIMMECHREKVEAVEKARAEERHIAQE----AIQAQKSKAVEE 64
++ LA EQR R +R E R+K E + + AEER +E ++A++++ EE
Sbjct: 485 EKRRLAREQREKEERERREQEELERQKREELAQRVAEERTTRREEESRRLEAEQAREKEE 544
Query: 65 IVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQ 118
+ ++ + R +RE+E AQRQ++EE + V +EAE+ Q
Sbjct: 545 QL---------QRQAEERALREREEAER-----AQRQKEEEAR-VREEAERVRQ 583
>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
Length = 2230
Score = 37.4 bits (85), Expect = 0.009
Identities = 30/134 (22%), Positives = 70/134 (52%), Gaps = 11/134 (8%)
Query: 8 EMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIVN 67
E +++ L E + + R++ + H++++E ++K +ER +E I+ ++ + +
Sbjct: 1936 EREKQKLGKEIVRLQKDLRMLRKEHQQELEILKKEYDQER---EEKIKQEQEDLELKHNS 1992
Query: 68 TGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQATLGNMMDK 127
T ++++ T +A+ +E+E EM+I ++ + QEV E ++HQ ++ K
Sbjct: 1993 TLKQLMREFNTQLAQ--KEQELEMTI------KETINKAQEVEAELLESHQEETNQLLKK 2044
Query: 128 LANTQGELLSIAKQ 141
+A +L AK+
Sbjct: 2045 IAEKDDDLKRTAKR 2058
Score = 36.6 bits (83), Expect = 0.015
Identities = 40/165 (24%), Positives = 76/165 (46%), Gaps = 15/165 (9%)
Query: 10 KREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIVNTG 69
++E EQ + ++Q E + A+EK+++E I+QE Q Q+S A+EE+
Sbjct: 486 EKELARKEQELTKKLQTREREFQEQMKVALEKSQSEYLKISQEKEQ-QESLALEELELQK 544
Query: 70 VTVIKDEKTSVARLMREKEH--------EMSILYGIAQRQRQEEVQEVLQEAEKT-HQAT 120
++ + + + L +E E E S+ + + + Q + V EAEK H
Sbjct: 545 KAILTESENKLRDLQQEAETYRTRILELESSLEKSLQENKNQSKDLAVHLEAEKNKHNKE 604
Query: 121 LGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETRMAFQK 165
+ M++K + EL S+ Q + W + L+ Q+ + +K
Sbjct: 605 ITVMVEK---HKTELESLKHQQDAL--WTEKLQVLKQQYQTEMEK 644
Score = 33.9 bits (76), Expect = 0.097
Identities = 25/108 (23%), Positives = 57/108 (52%), Gaps = 18/108 (16%)
Query: 34 EKVEAVEKARAEERHIAQEAIQAQKSKAVEEIVNTGVTVIKDEKTSVARLMREKEHEMSI 93
E+++ +EK EER ++Q + S+ +E+V+ + K + +A+L + E E++
Sbjct: 439 EQIKTIEKTSEEER----ISLQQELSRVKQEVVD---VMKKSSEEQIAKLQKLHEKELA- 490
Query: 94 LYGIAQRQRQEEVQEVLQEAEKTHQATLGNMMDKLANTQGELLSIAKQ 141
++++E+ + LQ E+ Q + ++K +Q E L I+++
Sbjct: 491 -------RKEQELTKKLQTREREFQEQMKVALEK---SQSEYLKISQE 528
Score = 33.9 bits (76), Expect = 0.097
Identities = 29/156 (18%), Positives = 70/156 (44%), Gaps = 5/156 (3%)
Query: 3 QNMDDEMKREHLAAEQRMVHRIQR---IMMECHREKVEAVEKARAEERHIAQEAIQAQKS 59
Q + E+ + L+A++ +H + + +K+E V++ E + ++ + Q++
Sbjct: 920 QKKEIEILTQKLSAKEDSIHILNEEYETKFKNQEKKMEKVKQKAKEMQETLKKKLLDQEA 979
Query: 60 KAVEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQR--QRQEEVQEVLQEAEKTH 117
K +E+ NT + + + EK A+++ + + + R Q+E E L E +
Sbjct: 980 KLKKELENTALELSQKEKQFNAKMLEMAQANSAGISDAVSRLETNQKEQIESLTEVHRRE 1039
Query: 118 QATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLE 153
+ ++ +K N Q E L ++ + ++ E
Sbjct: 1040 LNDVISIWEKKLNQQAEELQEIHEIQLQEKEQEVAE 1075
Score = 33.5 bits (75), Expect = 0.13
Identities = 34/171 (19%), Positives = 79/171 (46%), Gaps = 23/171 (13%)
Query: 8 EMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVE--EI 65
E RE E+ + + + I+ + H E++ + + + E++ ++ S+ ++
Sbjct: 643 EKLREKCEQEKETLLKDKEIIFQAHIEEMNEKTLEKLDVKQTELESLSSELSEVLKARHK 702
Query: 66 VNTGVTVIKDE----KTSVARLMRE-------------KEHEMSILYGI-AQRQRQEEVQ 107
+ ++V+KD+ K + M E KEHE+SI A + + +++
Sbjct: 703 LEEELSVLKDQTDKMKQELEAKMDEQKNHHQQQVDSIIKEHEVSIQRTEKALKDQINQLE 762
Query: 108 EVLQEAEK---THQATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEE 155
+L+E +K HQA + N+ + ++GEL + +L + +++ E+
Sbjct: 763 LLLKERDKHLKEHQAHVENLEADIKRSEGELQQASAKLDVFQSYQSATHEQ 813
Score = 32.7 bits (73), Expect = 0.22
Identities = 33/148 (22%), Positives = 68/148 (45%), Gaps = 8/148 (5%)
Query: 17 EQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIVNTGVTVIKDE 76
++ +R + + +E EK K ++++ + EA + + +K + +V T ++
Sbjct: 560 QEAETYRTRILELESSLEKSLQENKNQSKDLAVHLEAEKNKHNKEITVMVEKHKTELESL 619
Query: 77 KTSVARLMREKEHEMSILYGIAQRQRQEEVQE----VLQEAEKTHQATLGNM----MDKL 128
K L EK + Y + +E+ ++ +L++ E QA + M ++KL
Sbjct: 620 KHQQDALWTEKLQVLKQQYQTEMEKLREKCEQEKETLLKDKEIIFQAHIEEMNEKTLEKL 679
Query: 129 ANTQGELLSIAKQLGIMTNWKDFLEEEL 156
Q EL S++ +L + + LEEEL
Sbjct: 680 DVKQTELESLSSELSEVLKARHKLEEEL 707
Score = 28.1 bits (61), Expect = 5.3
Identities = 23/96 (23%), Positives = 46/96 (47%), Gaps = 13/96 (13%)
Query: 30 ECHREKVEAVEKARAEERHIAQEAIQAQKSKAVEEIV------NTGVTVIKDEKTSVARL 83
E H ++ + R E HI +E +++ +S E ++ N ++E S +
Sbjct: 1671 ESHLSELNTKLQEREREVHILEEKLKSVESSQSETLIVPRSAKNVAAYTEQEEADSQGCV 1730
Query: 84 MREKEHEMSILYGIAQR---QRQEEVQEVLQEAEKT 116
+ E ++S+L QR ++++ +Q V QE E+T
Sbjct: 1731 QKTYEEKISVL----QRNLTEKEKLLQRVGQEKEET 1762
Score = 27.7 bits (60), Expect = 7.0
Identities = 25/143 (17%), Positives = 66/143 (46%), Gaps = 20/143 (13%)
Query: 33 REKVEAVEKARAEERHIAQEAIQAQKSKAVEEIVNTGVTVIKDEKTSVARLMREKEHEMS 92
+E++E++ + E + + + ++ EE+ +++++ VA L ++
Sbjct: 1026 KEQIESLTEVHRRELNDVISIWEKKLNQQAEELQEIHEIQLQEKEQEVAELKQK-----I 1080
Query: 93 ILYGIAQRQRQEEVQEVLQEAEKTHQATLGNMMDKLANTQGELLSIAK------------ 140
+L+G + + +E+ + +E K TL + ++L + S+A+
Sbjct: 1081 LLFGCEKEEMNKEITWLKEEGVK-QDTTLNELQEQLKQKSAHVNSLAQDETKLKAHLEKL 1139
Query: 141 QLGIMTNWKD--FLEEELQETRM 161
++ + + K+ FL+E+L E +M
Sbjct: 1140 EVDLNKSLKENTFLQEQLVELKM 1162
>gi|41281453 serine/threonine kinase 2 [Homo sapiens]
Length = 1235
Score = 37.4 bits (85), Expect = 0.009
Identities = 25/125 (20%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 9 MKREHLAAEQRMVHRIQRIMMECHRE-KVEAVEKARAEERHIAQEAIQAQKSKAVEEIVN 67
+++E A+Q++ ++Q+ + R + E + K R ++ I E ++ Q+ + +E +
Sbjct: 837 LQKEEQRAQQQLNSKLQQQREQIFRRFEQEMMSKKRQYDQEI--ENLEKQQKQTIERLEQ 894
Query: 68 TGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTHQATLGNMMDK 127
++DE R+ E+E E+S + + +++E + EV + ++ + + ++
Sbjct: 895 EHTNRLRDE---AKRIKGEQEKELSKFQNMLKNRKKEVINEVEKAPKELRKELMKRRKEE 951
Query: 128 LANTQ 132
LA +Q
Sbjct: 952 LAQSQ 956
Score = 30.4 bits (67), Expect = 1.1
Identities = 36/158 (22%), Positives = 72/158 (45%), Gaps = 16/158 (10%)
Query: 2 YQNMDDEMKREHLAAEQRMVHRIQRIMMECHREKVEAVEKARAEERHIAQEAIQAQKSKA 61
+QNM K+E + ++ +++ +M+ R K E + A+E QE +Q Q+
Sbjct: 918 FQNMLKNRKKEVINEVEKAPKELRKELMK--RRKEELAQSQHAQE----QEFVQKQQ--- 968
Query: 62 VEEIVNTGVTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQ-EAEKTHQAT 120
+E+ + +I+ +K +A + RE + L R R+ + E+ + ++ HQ
Sbjct: 969 -QELDGSLKKIIQQQKAELANIERECLNNKQQL----MRAREAAIWELEERHLQEKHQLL 1023
Query: 121 LGNMMDKLANTQGELLS-IAKQLGIMTNWKDFLEEELQ 157
+ D+ + +LL K+ M + L EEL+
Sbjct: 1024 KQQLKDQYFMQRHQLLKRHEKETEQMQRYNQRLIEELK 1061
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 37.0 bits (84), Expect = 0.012
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 5 MDDEMKREHLAAEQRMVH----RIQRIMMECHREKVEAVEKARAEERHIAQ-EAIQAQKS 59
+D EM E + Q+ V R+ + + K E EK Q + ++ Q +
Sbjct: 175 LDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNA 234
Query: 60 KAVEEIVNTG--VTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTH 117
+ + +V + K E + +LM +K E+ ++ RQ++E +QE L +AE T
Sbjct: 235 RLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVV-----RQQRERLQEELSQAEST- 288
Query: 118 QATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETR 160
+D+L L + + ++T+ LEE+++E R
Sbjct: 289 -------IDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELR 324
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 37.0 bits (84), Expect = 0.012
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 5 MDDEMKREHLAAEQRMVH----RIQRIMMECHREKVEAVEKARAEERHIAQ-EAIQAQKS 59
+D EM E + Q+ V R+ + + K E EK Q + ++ Q +
Sbjct: 289 LDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNA 348
Query: 60 KAVEEIVNTG--VTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTH 117
+ + +V + K E + +LM +K E+ ++ RQ++E +QE L +AE T
Sbjct: 349 RLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVV-----RQQRERLQEELSQAEST- 402
Query: 118 QATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETR 160
+D+L L + + ++T+ LEE+++E R
Sbjct: 403 -------IDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELR 438
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 37.0 bits (84), Expect = 0.012
Identities = 38/163 (23%), Positives = 72/163 (44%), Gaps = 20/163 (12%)
Query: 5 MDDEMKREHLAAEQRMVH----RIQRIMMECHREKVEAVEKARAEERHIAQ-EAIQAQKS 59
+D EM E + Q+ V R+ + + K E EK Q + ++ Q +
Sbjct: 175 LDKEMAEERAESLQQEVEALKERVDELTTDLEILKAEIEEKGSDGAASSYQLKQLEEQNA 234
Query: 60 KAVEEIVNTG--VTVIKDEKTSVARLMREKEHEMSILYGIAQRQRQEEVQEVLQEAEKTH 117
+ + +V + K E + +LM +K E+ ++ RQ++E +QE L +AE T
Sbjct: 235 RLKDALVRMRDLSSSEKQEHVKLQKLMEKKNQELEVV-----RQQRERLQEELSQAEST- 288
Query: 118 QATLGNMMDKLANTQGELLSIAKQLGIMTNWKDFLEEELQETR 160
+D+L L + + ++T+ LEE+++E R
Sbjct: 289 -------IDELKEQVDAALGAEEMVEMLTDRNLNLEEKVRELR 324
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.127 0.340
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,634,761
Number of Sequences: 37866
Number of extensions: 256050
Number of successful extensions: 2067
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 284
Number of HSP's that attempted gapping in prelim test: 1733
Number of HSP's gapped (non-prelim): 581
length of query: 203
length of database: 18,247,518
effective HSP length: 97
effective length of query: 106
effective length of database: 14,574,516
effective search space: 1544898696
effective search space used: 1544898696
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.