Guide to the Human Genome
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Search of human proteins with 239748293

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]
         (164 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens]             346   6e-96
gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]             346   6e-96
gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens]             346   6e-96
gi|10863927 peptidylprolyl isomerase A [Homo sapiens]                 298   1e-81
gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]   271   2e-73
gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]    271   2e-73
gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A iso...   271   2e-73
gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   269   7e-73
gi|239751853 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   269   7e-73
gi|113428306 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   269   7e-73
gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   266   8e-72
gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens]             264   3e-71
gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens]              264   3e-71
gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens]              264   3e-71
gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   263   4e-71
gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   263   4e-71
gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B ...   257   3e-69
gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens]         257   3e-69
gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C ...   257   3e-69
gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G ...   256   5e-69
gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E ...   251   3e-67
gi|239756631 PREDICTED: similar to TRIMCyp [Homo sapiens]             246   5e-66
gi|239751117 PREDICTED: similar to TRIMCyp [Homo sapiens]             246   5e-66
gi|239755072 PREDICTED: similar to TRIMCyp [Homo sapiens]             244   2e-65
gi|239749598 PREDICTED: similar to TRIMCyp [Homo sapiens]             244   2e-65
gi|239743865 PREDICTED: similar to TRIMCyp [Homo sapiens]             244   2e-65
gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]        244   3e-65
gi|239757228 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   242   9e-65
gi|239751734 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   242   9e-65
gi|239746235 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   242   9e-65

>gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  346 bits (887), Expect = 6e-96
 Identities = 164/164 (100%), Positives = 164/164 (100%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL
Sbjct: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164


>gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  346 bits (887), Expect = 6e-96
 Identities = 164/164 (100%), Positives = 164/164 (100%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL
Sbjct: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164


>gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  346 bits (887), Expect = 6e-96
 Identities = 164/164 (100%), Positives = 164/164 (100%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL
Sbjct: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164


>gi|10863927 peptidylprolyl isomerase A [Homo sapiens]
          Length = 165

 Score =  298 bits (763), Expect = 1e-81
 Identities = 141/164 (85%), Positives = 148/164 (90%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPTVF DIAV GEPLG + FELFADK+PKT ENF ALSTGEKGFGYKGSCFHRIIPG 
Sbjct: 1   MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQ GDFT HNGTGGKSI GEKF+D+NFILKH GPGILSMAN GPNTN  Q FICTAK E
Sbjct: 61  MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           WLDGKHVVFGKVKEG+NIVEAMERFGSRNGKTSKKITI+DCG+L
Sbjct: 121 WLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKITIADCGQL 164


>gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]
          Length = 165

 Score =  271 bits (692), Expect = 2e-73
 Identities = 131/164 (79%), Positives = 137/164 (83%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPTVF  I+V GE LG I FELFADK PKT ENF AL+TGEKGFGYKG CFHRIIPG 
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MC  GDFT HNGTGGKSI GEK DD NFILKH GPGILSMAN GPNTN  Q FICTAK+E
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           WLD KHVV GKVKEG+NIVEAME FGSRNGKTSKK+TI D G+L
Sbjct: 121 WLDSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPDFGQL 164


>gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]
          Length = 165

 Score =  271 bits (692), Expect = 2e-73
 Identities = 131/164 (79%), Positives = 137/164 (83%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPTVF  I+V GE LG I FELFADK PKT ENF AL+TGEKGFGYKG CFHRIIPG 
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MC  GDFT HNGTGGKSI GEK DD NFILKH GPGILSMAN GPNTN  Q FICTAK+E
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           WLD KHVV GKVKEG+NIVEAME FGSRNGKTSKK+TI D G+L
Sbjct: 121 WLDSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPDFGQL 164


>gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A
           isoform 2 [Homo sapiens]
          Length = 165

 Score =  271 bits (692), Expect = 2e-73
 Identities = 131/164 (79%), Positives = 137/164 (83%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPTVF  I+V GE LG I FELFADK PKT ENF AL+TGEKGFGYKG CFHRIIPG 
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MC  GDFT HNGTGGKSI GEK DD NFILKH GPGILSMAN GPNTN  Q FICTAK+E
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           WLD KHVV GKVKEG+NIVEAME FGSRNGKTSKK+TI D G+L
Sbjct: 121 WLDSKHVVIGKVKEGMNIVEAMEHFGSRNGKTSKKVTIPDFGQL 164


>gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 210

 Score =  269 bits (688), Expect = 7e-73
 Identities = 129/163 (79%), Positives = 137/163 (84%)

Query: 2   VNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGVM 61
           VNPTVF DIAV GEPLG + FELFADK PK+ E  HALSTGEKGFGYKGSCFHRIIPG M
Sbjct: 48  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 107

Query: 62  CQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAEW 121
           CQ GDFT H  TGGKS+  EKFDD+NFILKH GPGILSMAN GPNTN  QCFICTAK E 
Sbjct: 108 CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 167

Query: 122 LDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           LDGKHVVFG VKEG+ IVEAME FG RNGKTSK+ITI+DC +L
Sbjct: 168 LDGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADCEQL 210


>gi|239751853 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 186

 Score =  269 bits (688), Expect = 7e-73
 Identities = 129/163 (79%), Positives = 137/163 (84%)

Query: 2   VNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGVM 61
           VNPTVF DIAV GEPLG + FELFADK PK+ E  HALSTGEKGFGYKGSCFHRIIPG M
Sbjct: 24  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 83

Query: 62  CQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAEW 121
           CQ GDFT H  TGGKS+  EKFDD+NFILKH GPGILSMAN GPNTN  QCFICTAK E 
Sbjct: 84  CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 143

Query: 122 LDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           LDGKHVVFG VKEG+ IVEAME FG RNGKTSK+ITI+DC +L
Sbjct: 144 LDGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADCEQL 186


>gi|113428306 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 186

 Score =  269 bits (688), Expect = 7e-73
 Identities = 129/163 (79%), Positives = 137/163 (84%)

Query: 2   VNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGVM 61
           VNPTVF DIAV GEPLG + FELFADK PK+ E  HALSTGEKGFGYKGSCFHRIIPG M
Sbjct: 24  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 83

Query: 62  CQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAEW 121
           CQ GDFT H  TGGKS+  EKFDD+NFILKH GPGILSMAN GPNTN  QCFICTAK E 
Sbjct: 84  CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 143

Query: 122 LDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           LDGKHVVFG VKEG+ IVEAME FG RNGKTSK+ITI+DC +L
Sbjct: 144 LDGKHVVFGTVKEGMKIVEAMEYFGPRNGKTSKEITIADCEQL 186


>gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 272

 Score =  266 bits (679), Expect = 8e-72
 Identities = 127/164 (77%), Positives = 139/164 (84%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPTVF DI+V G+PLG + F +FADK+ KT +NF ALSTGEKG  YKGSCFHRIIPG 
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQ GDFT +NGTGGKS+ GEKFDD+NFILK   PGILSMA  GPNTN  Q FICTAK E
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAKTE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           WL GKHVVFGKVKEG+NIVEAME FGSRNGKTSKKITI+DCG+L
Sbjct: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164


>gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  264 bits (674), Expect = 3e-71
 Identities = 125/161 (77%), Positives = 134/161 (83%)

Query: 4   PTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGVMCQ 63
           PTVF DI ++ +PLG + F+LFADK PKT ENF ALSTGEKGFGYK SCFHRIIPG MCQ
Sbjct: 7   PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQ 66

Query: 64  RGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAEWLD 123
            GDFT HNGTG KSI GEKFDD+NFILKH GPGI SMAN GPNTN  Q   CTAK  WLD
Sbjct: 67  GGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLD 126

Query: 124 GKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           G HVV GKVKEG+NI EAMERFGSRNGKTSKKITI+DCG+L
Sbjct: 127 GMHVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADCGQL 167


>gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  264 bits (674), Expect = 3e-71
 Identities = 125/161 (77%), Positives = 134/161 (83%)

Query: 4   PTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGVMCQ 63
           PTVF DI ++ +PLG + F+LFADK PKT ENF ALSTGEKGFGYK SCFHRIIPG MCQ
Sbjct: 7   PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQ 66

Query: 64  RGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAEWLD 123
            GDFT HNGTG KSI GEKFDD+NFILKH GPGI SMAN GPNTN  Q   CTAK  WLD
Sbjct: 67  GGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLD 126

Query: 124 GKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           G HVV GKVKEG+NI EAMERFGSRNGKTSKKITI+DCG+L
Sbjct: 127 GMHVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADCGQL 167


>gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  264 bits (674), Expect = 3e-71
 Identities = 125/161 (77%), Positives = 134/161 (83%)

Query: 4   PTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGVMCQ 63
           PTVF DI ++ +PLG + F+LFADK PKT ENF ALSTGEKGFGYK SCFHRIIPG MCQ
Sbjct: 7   PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQ 66

Query: 64  RGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAEWLD 123
            GDFT HNGTG KSI GEKFDD+NFILKH GPGI SMAN GPNTN  Q   CTAK  WLD
Sbjct: 67  GGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLD 126

Query: 124 GKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           G HVV GKVKEG+NI EAMERFGSRNGKTSKKITI+DCG+L
Sbjct: 127 GMHVVLGKVKEGMNIAEAMERFGSRNGKTSKKITIADCGQL 167


>gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score =  263 bits (673), Expect = 4e-71
 Identities = 126/164 (76%), Positives = 138/164 (84%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPTVF DI+V G+PLG + F +FADK+ KT +NF ALSTGEKG  YKGSCFHRIIPG 
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQ GDFT +NGTGGKS+ GEKFDD+NFILK   PGILSMA  GPNTN  Q FICTA  E
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           WL GKHVVFGKVKEG+NIVEAME FGSRNGKTSKKITI+DCG+L
Sbjct: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164


>gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score =  263 bits (673), Expect = 4e-71
 Identities = 126/164 (76%), Positives = 138/164 (84%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPTVF DI+V G+PLG + F +FADK+ KT +NF ALSTGEKG  YKGSCFHRIIPG 
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQ GDFT +NGTGGKS+ GEKFDD+NFILK   PGILSMA  GPNTN  Q FICTA  E
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           WL GKHVVFGKVKEG+NIVEAME FGSRNGKTSKKITI+DCG+L
Sbjct: 121 WLIGKHVVFGKVKEGMNIVEAMEPFGSRNGKTSKKITIADCGQL 164


>gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B
           [Homo sapiens]
          Length = 164

 Score =  257 bits (657), Expect = 3e-69
 Identities = 125/163 (76%), Positives = 131/163 (80%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVN  VF DI V G+PLG I  +LFADKI KT ENF ALSTGEKGF YKGSCFHRIIPG 
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQ GDFT HNGTG KSI GEKFDD+N I KH G GILSMAN GPNTN  Q FIC AK E
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGK 163
           WLDGKHV FGKVKE +NIVEAME FG RN KTSKKITI+DCG+
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163


>gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens]
          Length = 164

 Score =  257 bits (657), Expect = 3e-69
 Identities = 125/163 (76%), Positives = 131/163 (80%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVN  VF DI V G+PLG I  +LFADKI KT ENF ALSTGEKGF YKGSCFHRIIPG 
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQ GDFT HNGTG KSI GEKFDD+N I KH G GILSMAN GPNTN  Q FIC AK E
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGK 163
           WLDGKHV FGKVKE +NIVEAME FG RN KTSKKITI+DCG+
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163


>gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C
           [Homo sapiens]
          Length = 164

 Score =  257 bits (657), Expect = 3e-69
 Identities = 125/163 (76%), Positives = 131/163 (80%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVN  VF DI V G+PLG I  +LFADKI KT ENF ALSTGEKGF YKGSCFHRIIPG 
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQ GDFT HNGTG KSI GEKFDD+N I KH G GILSMAN GPNTN  Q FIC AK E
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGK 163
           WLDGKHV FGKVKE +NIVEAME FG RN KTSKKITI+DCG+
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163


>gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G
           [Homo sapiens]
          Length = 164

 Score =  256 bits (655), Expect = 5e-69
 Identities = 124/163 (76%), Positives = 131/163 (80%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVN  +F DI V G+PLG I  + FADKIPKT ENF ALSTGEKGF YKGSCFHRIIPG 
Sbjct: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQ GDFT  NGTG KSI GEKFDD+N I KH G GILSMAN GPNTN  Q FICTAK E
Sbjct: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGK 163
           WLDGKHV FGKVKE +NIVEAME FG RN KTSKKITI+DCG+
Sbjct: 121 WLDGKHVAFGKVKERVNIVEAMEHFGYRNSKTSKKITIADCGQ 163


>gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E
           [Homo sapiens]
          Length = 164

 Score =  251 bits (640), Expect = 3e-67
 Identities = 122/163 (74%), Positives = 129/163 (79%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVN  VF +I   G+PLG I  +LFADKIPKT ENF ALSTGEKGF YKGSCFHRIIPG 
Sbjct: 1   MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQ GDFT  NGTG KSI GEKFDD+N I KH G GILSMAN GPNTN  Q FIC AK E
Sbjct: 61  MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGK 163
           WLDGKHV FGKVKE +NIVEA E FG RN KTSKKITI+DCG+
Sbjct: 121 WLDGKHVAFGKVKERVNIVEATEHFGYRNSKTSKKITIADCGQ 163


>gi|239756631 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 166

 Score =  246 bits (629), Expect = 5e-66
 Identities = 121/164 (73%), Positives = 132/164 (80%), Gaps = 1/164 (0%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPTVF ++A+  +PL  I F LFADK+PKT ENFHALSTGEKGFGYKGSCFHRIIPG 
Sbjct: 1   MVNPTVFFEMAIDSKPLSHISFXLFADKLPKTAENFHALSTGEKGFGYKGSCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQ G FT HNGTGGKSI GEK DD+NFILKH  PG LSMAN GPNTN  + FICTAK  
Sbjct: 61  MCQGGGFTCHNGTGGKSIYGEKLDDENFILKHTCPGTLSMANAGPNTNGSRFFICTAKTV 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
            +  KHVV  KVKEG+NIV AME FGSRNGKTSK IT +DCG+L
Sbjct: 121 -VGQKHVVSSKVKEGMNIVGAMEHFGSRNGKTSKMITTADCGQL 163


>gi|239751117 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 166

 Score =  246 bits (629), Expect = 5e-66
 Identities = 121/164 (73%), Positives = 132/164 (80%), Gaps = 1/164 (0%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPTVF ++A+  +PL  I F LFADK+PKT ENFHALSTGEKGFGYKGSCFHRIIPG 
Sbjct: 1   MVNPTVFFEMAIDSKPLSHISFXLFADKLPKTAENFHALSTGEKGFGYKGSCFHRIIPGF 60

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MCQ G FT HNGTGGKSI GEK DD+NFILKH  PG LSMAN GPNTN  + FICTAK  
Sbjct: 61  MCQGGGFTCHNGTGGKSIYGEKLDDENFILKHTCPGTLSMANAGPNTNGSRFFICTAKTV 120

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
            +  KHVV  KVKEG+NIV AME FGSRNGKTSK IT +DCG+L
Sbjct: 121 -VGQKHVVSSKVKEGMNIVGAMEHFGSRNGKTSKMITTADCGQL 163


>gi|239755072 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  244 bits (623), Expect = 2e-65
 Identities = 115/143 (80%), Positives = 125/143 (87%)

Query: 22  FELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGVMCQRGDFTSHNGTGGKSIQGE 81
           F+LF +KI K   NFHA ST EKGFGYKGSCFHRIIPG MCQ GDFT+HNGTG KS+ GE
Sbjct: 79  FKLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYGE 138

Query: 82  KFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAEWLDGKHVVFGKVKEGINIVEA 141
           KFD +NFILKH GPGILSMAN G NTNS Q FICTAK EWLDGKHVVFGKVKEG++I+EA
Sbjct: 139 KFDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIMEA 198

Query: 142 MERFGSRNGKTSKKITISDCGKL 164
           MERFGSRNGKTSKKITI+DCG+L
Sbjct: 199 MERFGSRNGKTSKKITIADCGQL 221


>gi|239749598 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  244 bits (623), Expect = 2e-65
 Identities = 115/143 (80%), Positives = 125/143 (87%)

Query: 22  FELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGVMCQRGDFTSHNGTGGKSIQGE 81
           F+LF +KI K   NFHA ST EKGFGYKGSCFHRIIPG MCQ GDFT+HNGTG KS+ GE
Sbjct: 79  FKLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYGE 138

Query: 82  KFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAEWLDGKHVVFGKVKEGINIVEA 141
           KFD +NFILKH GPGILSMAN G NTNS Q FICTAK EWLDGKHVVFGKVKEG++I+EA
Sbjct: 139 KFDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIMEA 198

Query: 142 MERFGSRNGKTSKKITISDCGKL 164
           MERFGSRNGKTSKKITI+DCG+L
Sbjct: 199 MERFGSRNGKTSKKITIADCGQL 221


>gi|239743865 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  244 bits (623), Expect = 2e-65
 Identities = 115/143 (80%), Positives = 125/143 (87%)

Query: 22  FELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGVMCQRGDFTSHNGTGGKSIQGE 81
           F+LF +KI K   NFHA ST EKGFGYKGSCFHRIIPG MCQ GDFT+HNGTG KS+ GE
Sbjct: 79  FKLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYGE 138

Query: 82  KFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAEWLDGKHVVFGKVKEGINIVEA 141
           KFD +NFILKH GPGILSMAN G NTNS Q FICTAK EWLDGKHVVFGKVKEG++I+EA
Sbjct: 139 KFDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMSIMEA 198

Query: 142 MERFGSRNGKTSKKITISDCGKL 164
           MERFGSRNGKTSKKITI+DCG+L
Sbjct: 199 MERFGSRNGKTSKKITIADCGQL 221


>gi|5031987 peptidylprolyl isomerase F precursor [Homo sapiens]
          Length = 207

 Score =  244 bits (622), Expect = 3e-65
 Identities = 110/162 (67%), Positives = 132/162 (81%)

Query: 3   NPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGVMC 62
           NP V+LD+  +G+PLG +  EL AD +PKT ENF AL TGEKGFGYKGS FHR+IP  MC
Sbjct: 45  NPLVYLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMC 104

Query: 63  QRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAEWL 122
           Q GDFT+HNGTGGKSI G +F D+NF LKH GPG+LSMAN GPNTN  Q FICT K +WL
Sbjct: 105 QAGDFTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWL 164

Query: 123 DGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDCGKL 164
           DGKHVVFG VKEG+++V+ +E FGS++G+TSKKI I+DCG+L
Sbjct: 165 DGKHVVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206


>gi|239757228 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  242 bits (618), Expect = 9e-65
 Identities = 119/161 (73%), Positives = 128/161 (79%), Gaps = 5/161 (3%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPT F +     EP G I  +LFADK PKT EN  ALS GEKGFGYKGSCFHRIIPG 
Sbjct: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MC  GDFT HNG+GGK I GEKFDD+NFILK  G GILS  N GPNTN  Q FIC+AK+E
Sbjct: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDC 161
           WLDG+HV FGKVKEG+NIVEAME FGSRNGKTSKKITI+DC
Sbjct: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156


>gi|239751734 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  242 bits (618), Expect = 9e-65
 Identities = 119/161 (73%), Positives = 128/161 (79%), Gaps = 5/161 (3%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPT F +     EP G I  +LFADK PKT EN  ALS GEKGFGYKGSCFHRIIPG 
Sbjct: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MC  GDFT HNG+GGK I GEKFDD+NFILK  G GILS  N GPNTN  Q FIC+AK+E
Sbjct: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDC 161
           WLDG+HV FGKVKEG+NIVEAME FGSRNGKTSKKITI+DC
Sbjct: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156


>gi|239746235 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  242 bits (618), Expect = 9e-65
 Identities = 119/161 (73%), Positives = 128/161 (79%), Gaps = 5/161 (3%)

Query: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60
           MVNPT F +     EP G I  +LFADK PKT EN  ALS GEKGFGYKGSCFHRIIPG 
Sbjct: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55

Query: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120
           MC  GDFT HNG+GGK I GEKFDD+NFILK  G GILS  N GPNTN  Q FIC+AK+E
Sbjct: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115

Query: 121 WLDGKHVVFGKVKEGINIVEAMERFGSRNGKTSKKITISDC 161
           WLDG+HV FGKVKEG+NIVEAME FGSRNGKTSKKITI+DC
Sbjct: 116 WLDGEHVFFGKVKEGMNIVEAMEGFGSRNGKTSKKITIADC 156


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.140    0.436 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,191,095
Number of Sequences: 37866
Number of extensions: 339758
Number of successful extensions: 609
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 496
Number of HSP's gapped (non-prelim): 80
length of query: 164
length of database: 18,247,518
effective HSP length: 94
effective length of query: 70
effective length of database: 14,688,114
effective search space: 1028167980
effective search space used: 1028167980
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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