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Search of human proteins with 239747400
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747400 PREDICTED: similar to hCG2040319 [Homo sapiens]
(274 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169160873 PREDICTED: similar to hCG2040319 [Homo sapiens] 563 e-161
gi|239747400 PREDICTED: similar to hCG2040319 [Homo sapiens] 563 e-161
gi|239741226 PREDICTED: similar to hCG2040319 [Homo sapiens] 563 e-161
gi|10092691 tight junction protein 3 [Homo sapiens] 293 1e-79
gi|42518070 tight junction protein 2 (zona occludens 2) isoform ... 92 6e-19
gi|42518065 tight junction protein 2 (zona occludens 2) isoform ... 91 1e-18
gi|116875767 tight junction protein 1 isoform a [Homo sapiens] 87 2e-17
gi|116875765 tight junction protein 1 isoform b [Homo sapiens] 82 4e-16
gi|151101459 SAPS domain family, member 1 [Homo sapiens] 37 0.019
gi|148806881 hypothetical protein LOC57608 [Homo sapiens] 35 0.092
gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo ... 35 0.092
gi|124028519 hypothetical protein LOC158401 isoform 2 [Homo sapi... 33 0.21
gi|124028515 hypothetical protein LOC158401 isoform 1 [Homo sapi... 33 0.21
gi|170784854 PTPRF interacting protein, binding protein 2 (lipri... 33 0.27
gi|7706589 GNAS complex locus NESP55 [Homo sapiens] 33 0.35
gi|195539337 S-adenosylhomocysteine hydrolase-like 2 isoform b [... 32 0.46
gi|24308043 S-adenosylhomocysteine hydrolase-like 2 isoform a [H... 32 0.46
gi|91208437 GEM interacting protein [Homo sapiens] 32 0.46
gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens] 32 0.60
gi|148539628 discs, large homolog 1 isoform 1 [Homo sapiens] 32 0.60
gi|148539578 discs, large homolog 1 isoform 2 [Homo sapiens] 32 0.60
gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 32 0.78
gi|124430752 kinesin family member 26B [Homo sapiens] 32 0.78
gi|169206171 PREDICTED: hypothetical protein [Homo sapiens] 31 1.0
gi|239751180 PREDICTED: hypothetical protein XP_002347740 [Homo ... 31 1.0
gi|239745668 PREDICTED: hypothetical protein XP_002343538 [Homo ... 31 1.0
gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo sapi... 31 1.0
gi|169206489 PREDICTED: hypothetical protein [Homo sapiens] 31 1.3
gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 31 1.3
gi|169205942 PREDICTED: hypothetical protein [Homo sapiens] 31 1.3
>gi|169160873 PREDICTED: similar to hCG2040319 [Homo sapiens]
Length = 274
Score = 563 bits (1452), Expect = e-161
Identities = 274/274 (100%), Positives = 274/274 (100%)
Query: 1 MPYIQKRKRKFMDLHKELSWLAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTW 60
MPYIQKRKRKFMDLHKELSWLAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTW
Sbjct: 1 MPYIQKRKRKFMDLHKELSWLAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTW 60
Query: 61 YQEFKAIIREQQTRPIWTAEDKLDGSLEDNPHRGLADSSADLSCDSRVNSDYWRRRKARA 120
YQEFKAIIREQQTRPIWTAEDKLDGSLEDNPHRGLADSSADLSCDSRVNSDYWRRRKARA
Sbjct: 61 YQEFKAIIREQQTRPIWTAEDKLDGSLEDNPHRGLADSSADLSCDSRVNSDYWRRRKARA 120
Query: 121 ARTLMASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDS 180
ARTLMASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDS
Sbjct: 121 ARTLMASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDS 180
Query: 181 PHPQGQRRQDSMRTCEPEALKKKFTRVRDAESPMKMATTGVRPLTCDLSQAASWSVLLLP 240
PHPQGQRRQDSMRTCEPEALKKKFTRVRDAESPMKMATTGVRPLTCDLSQAASWSVLLLP
Sbjct: 181 PHPQGQRRQDSMRTCEPEALKKKFTRVRDAESPMKMATTGVRPLTCDLSQAASWSVLLLP 240
Query: 241 SWGWDSVSCTEPTTSPPSAWSLLNRVFSHQKKKK 274
SWGWDSVSCTEPTTSPPSAWSLLNRVFSHQKKKK
Sbjct: 241 SWGWDSVSCTEPTTSPPSAWSLLNRVFSHQKKKK 274
>gi|239747400 PREDICTED: similar to hCG2040319 [Homo sapiens]
Length = 274
Score = 563 bits (1452), Expect = e-161
Identities = 274/274 (100%), Positives = 274/274 (100%)
Query: 1 MPYIQKRKRKFMDLHKELSWLAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTW 60
MPYIQKRKRKFMDLHKELSWLAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTW
Sbjct: 1 MPYIQKRKRKFMDLHKELSWLAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTW 60
Query: 61 YQEFKAIIREQQTRPIWTAEDKLDGSLEDNPHRGLADSSADLSCDSRVNSDYWRRRKARA 120
YQEFKAIIREQQTRPIWTAEDKLDGSLEDNPHRGLADSSADLSCDSRVNSDYWRRRKARA
Sbjct: 61 YQEFKAIIREQQTRPIWTAEDKLDGSLEDNPHRGLADSSADLSCDSRVNSDYWRRRKARA 120
Query: 121 ARTLMASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDS 180
ARTLMASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDS
Sbjct: 121 ARTLMASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDS 180
Query: 181 PHPQGQRRQDSMRTCEPEALKKKFTRVRDAESPMKMATTGVRPLTCDLSQAASWSVLLLP 240
PHPQGQRRQDSMRTCEPEALKKKFTRVRDAESPMKMATTGVRPLTCDLSQAASWSVLLLP
Sbjct: 181 PHPQGQRRQDSMRTCEPEALKKKFTRVRDAESPMKMATTGVRPLTCDLSQAASWSVLLLP 240
Query: 241 SWGWDSVSCTEPTTSPPSAWSLLNRVFSHQKKKK 274
SWGWDSVSCTEPTTSPPSAWSLLNRVFSHQKKKK
Sbjct: 241 SWGWDSVSCTEPTTSPPSAWSLLNRVFSHQKKKK 274
>gi|239741226 PREDICTED: similar to hCG2040319 [Homo sapiens]
Length = 274
Score = 563 bits (1452), Expect = e-161
Identities = 274/274 (100%), Positives = 274/274 (100%)
Query: 1 MPYIQKRKRKFMDLHKELSWLAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTW 60
MPYIQKRKRKFMDLHKELSWLAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTW
Sbjct: 1 MPYIQKRKRKFMDLHKELSWLAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTW 60
Query: 61 YQEFKAIIREQQTRPIWTAEDKLDGSLEDNPHRGLADSSADLSCDSRVNSDYWRRRKARA 120
YQEFKAIIREQQTRPIWTAEDKLDGSLEDNPHRGLADSSADLSCDSRVNSDYWRRRKARA
Sbjct: 61 YQEFKAIIREQQTRPIWTAEDKLDGSLEDNPHRGLADSSADLSCDSRVNSDYWRRRKARA 120
Query: 121 ARTLMASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDS 180
ARTLMASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDS
Sbjct: 121 ARTLMASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDS 180
Query: 181 PHPQGQRRQDSMRTCEPEALKKKFTRVRDAESPMKMATTGVRPLTCDLSQAASWSVLLLP 240
PHPQGQRRQDSMRTCEPEALKKKFTRVRDAESPMKMATTGVRPLTCDLSQAASWSVLLLP
Sbjct: 181 PHPQGQRRQDSMRTCEPEALKKKFTRVRDAESPMKMATTGVRPLTCDLSQAASWSVLLLP 240
Query: 241 SWGWDSVSCTEPTTSPPSAWSLLNRVFSHQKKKK 274
SWGWDSVSCTEPTTSPPSAWSLLNRVFSHQKKKK
Sbjct: 241 SWGWDSVSCTEPTTSPPSAWSLLNRVFSHQKKKK 274
>gi|10092691 tight junction protein 3 [Homo sapiens]
Length = 952
Score = 293 bits (750), Expect = 1e-79
Identities = 155/196 (79%), Positives = 156/196 (79%), Gaps = 5/196 (2%)
Query: 20 WLAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTWYQEFKAIIREQQTRPIWTA 79
WLAPAS RSTRRLYAQAQKLRK SSHLFTATIPLNGTSDTWYQE KAIIREQQTRPIWTA
Sbjct: 745 WLAPASRRSTRRLYAQAQKLRKHSSHLFTATIPLNGTSDTWYQELKAIIREQQTRPIWTA 804
Query: 80 EDKLDGSLEDN---PHRGLADSSADLSCDSRVNSDYWRRRKARAARTLMASATQTASGGP 136
ED+LDGSLEDN PH GLADSSADLSCDSRVNSDY GGP
Sbjct: 805 EDQLDGSLEDNLDLPHHGLADSSADLSCDSRVNSDY--ETDGEGGAYTDGEGYTDGEGGP 862
Query: 137 YTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDSPHPQGQRRQDSMRTCE 196
YTD DDE PAPAL RSSEPVQADE QSPR RGRISAHQG QVDS HPQGQ RQDSMRT E
Sbjct: 863 YTDVDDEPPAPALARSSEPVQADESQSPRDRGRISAHQGAQVDSRHPQGQWRQDSMRTYE 922
Query: 197 PEALKKKFTRVRDAES 212
EALKKKF RV DAES
Sbjct: 923 REALKKKFMRVHDAES 938
>gi|42518070 tight junction protein 2 (zona occludens 2) isoform 1
[Homo sapiens]
Length = 1190
Score = 91.7 bits (226), Expect = 6e-19
Identities = 62/177 (35%), Positives = 92/177 (51%), Gaps = 30/177 (16%)
Query: 21 LAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTWYQEFKAIIREQQTRPIWTAE 80
L P S +S+R+L+ QA KL+K +HLFTATI LN +D+W+ K I+ QQ +W +E
Sbjct: 828 LNPTSNKSSRKLFDQANKLKKTCAHLFTATINLNSANDSWFGSLKDTIQHQQGEAVWVSE 887
Query: 81 DKLDGSLEDNPHRGLADSSA----DLSCDSRVNSDYWRRRKARAARTLMASATQTASGGP 136
K++G ++D+P ++ +A LSCDSR+ SD+ GG
Sbjct: 888 GKMEG-MDDDPEDRMSYLTAMGADYLSCDSRLISDF---------------EDTDGEGGA 931
Query: 137 YTDADDELPA-----PALDRSSEPVQADE-----PQSPRVRGRISAHQGPQVDSPHP 183
YTD + + PA ++ RSSEPVQ +E PR + R +A D+ P
Sbjct: 932 YTDNELDEPAEEPLVSSITRSSEPVQHEESIRKPSPEPRAQMRRAASSDQLRDNSPP 988
>gi|42518065 tight junction protein 2 (zona occludens 2) isoform 2
[Homo sapiens]
Length = 1043
Score = 90.9 bits (224), Expect = 1e-18
Identities = 56/149 (37%), Positives = 83/149 (55%), Gaps = 25/149 (16%)
Query: 21 LAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTWYQEFKAIIREQQTRPIWTAE 80
L P S +S+R+L+ QA KL+K +HLFTATI LN +D+W+ K I+ QQ +W +E
Sbjct: 828 LNPTSNKSSRKLFDQANKLKKTCAHLFTATINLNSANDSWFGSLKDTIQHQQGEAVWVSE 887
Query: 81 DKLDGSLEDNPHRGLADSSA----DLSCDSRVNSDYWRRRKARAARTLMASATQTASGGP 136
K++G ++D+P ++ +A LSCDSR+ SD+ GG
Sbjct: 888 GKMEG-MDDDPEDRMSYLTAMGADYLSCDSRLISDF---------------EDTDGEGGA 931
Query: 137 YTDADDELPA-----PALDRSSEPVQADE 160
YTD + + PA ++ RSSEPVQ +E
Sbjct: 932 YTDNELDEPAEEPLVSSITRSSEPVQHEE 960
>gi|116875767 tight junction protein 1 isoform a [Homo sapiens]
Length = 1748
Score = 86.7 bits (213), Expect = 2e-17
Identities = 79/259 (30%), Positives = 114/259 (44%), Gaps = 51/259 (19%)
Query: 21 LAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTWYQEFKAIIREQQTRPIWTAE 80
L P S +S R+LY ++ KLRK + HLFT TI LN +D WY K I++QQ + +W +E
Sbjct: 743 LCPESRKSARKLYERSHKLRKNNHHLFTTTINLNSMNDGWYGALKEAIQQQQNQLVWVSE 802
Query: 81 DKLDGS------LEDNPHRGLADSSAD---LSCDSRVNSDYWRRRKARAARTLMASATQT 131
K DG+ L D+ L+ ++ S DSR SDY T T
Sbjct: 803 GKADGATSDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDY--------------EDTDT 848
Query: 132 ASGGPYTDAD------DEL---PAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDSPH 182
GG YTD + DE+ P A+ RSSEPV+ D H Q P+
Sbjct: 849 -EGGAYTDQELDETLNDEVGTPPESAITRSSEPVREDSS---------GMHHENQTYPPY 898
Query: 183 PQGQRRQDSMRTCEPEALKKKFTRVRDAESPMKMATTGVRPLTCDLSQAASWSVLLLPSW 242
+ Q R P K + +A SP+ + P + + A + +V L
Sbjct: 899 SPQAQPQPIHRIDSP-GFKPASQQKAEASSPVPYLSPETNPASS--TSAVNHNVNL---- 951
Query: 243 GWDSVSCTEPTTSPPSAWS 261
+V EPT +P +++S
Sbjct: 952 --TNVRLEEPTPAPSTSYS 968
>gi|116875765 tight junction protein 1 isoform b [Homo sapiens]
Length = 1668
Score = 82.4 bits (202), Expect = 4e-16
Identities = 59/157 (37%), Positives = 79/157 (50%), Gaps = 33/157 (21%)
Query: 21 LAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTWYQEFKAIIREQQTRPIWTAE 80
L P S +S R+LY ++ KLRK + HLFT TI LN +D WY K I++QQ + +W +E
Sbjct: 743 LCPESRKSARKLYERSHKLRKNNHHLFTTTINLNSMNDGWYGALKEAIQQQQNQLVWVSE 802
Query: 81 DKLDGS------LEDNPHRGLADSSAD---LSCDSRVNSDYWRRRKARAARTLMASATQT 131
K DG+ L D+ L+ ++ S DSR SDY T T
Sbjct: 803 GKADGATSDDLDLHDDRLSYLSAPGSEYSMYSTDSRHTSDY--------------EDTDT 848
Query: 132 ASGGPYTDAD------DEL---PAPALDRSSEPVQAD 159
GG YTD + DE+ P A+ RSSEPV+ D
Sbjct: 849 -EGGAYTDQELDETLNDEVGTPPESAITRSSEPVRED 884
>gi|151101459 SAPS domain family, member 1 [Homo sapiens]
Length = 881
Score = 37.0 bits (84), Expect = 0.019
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 137 YTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDSPHPQG 185
Y + P P+ + +PV D P SPRV G H GP P PQG
Sbjct: 700 YPSPGPQPPGPSWTATFDPVPTDAPTSPRVSGEEELHTGP----PAPQG 744
>gi|148806881 hypothetical protein LOC57608 [Homo sapiens]
Length = 1359
Score = 34.7 bits (78), Expect = 0.092
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 7/55 (12%)
Query: 162 QSPRVRGRISAHQGPQVDSPHPQGQRRQDSMRTCEPEALKKKF-TRVRDAESPMK 215
Q P VRG H G QV SP+ QG+ TCE + KKF T R +S K
Sbjct: 525 QWPDVRGSQHGHTGRQVSSPYSQGE------STCETQTKLKKFQTGTRTKKSSKK 573
>gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo
sapiens]
Length = 782
Score = 34.7 bits (78), Expect = 0.092
Identities = 30/121 (24%), Positives = 48/121 (39%), Gaps = 6/121 (4%)
Query: 91 PHRGLADSSADLSCDSRVNSDYWRRRKARAARTLMASATQTASGG---PYTDADDELPAP 147
P R A+ + +S + +A +A T T S P ++ P P
Sbjct: 434 PERRTAEGAPGAGLQRSASSSWLEGTSTQAKELRLARITPTPSPKLPEPSVLSEVTKPPP 493
Query: 148 ALDRSSEPVQADEPQSPRVRGRISAHQGPQVDSPHPQGQRRQDSMRTCEPEALKKKFTRV 207
L+ SS P + EP+SP +A P DS + +RR M + E+ ++ R
Sbjct: 494 CLENSSPPSRIPEPESPAKPNVPTASTAPPADS---RDRRRSYQMPVRDEESESQRKARS 550
Query: 208 R 208
R
Sbjct: 551 R 551
>gi|124028519 hypothetical protein LOC158401 isoform 2 [Homo sapiens]
Length = 1405
Score = 33.5 bits (75), Expect = 0.21
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 53 LNGTSDTWYQEFKAIIREQQTRPI-------WTAEDKL---DGSLEDNPHRGLADSSADL 102
L GT + FK I EQ+ P TA +KL G+L + + L+D S L
Sbjct: 1246 LEGTQSPLHWNFKKNIWEQENHPFNLQYGAQQTACNKLYSQKGNLFTDQQKCLSDESEGL 1305
Query: 103 SCDSRVNSDYWRRRKARAARTLMASATQTAS 133
+C+S + +WR + + L ++ A+
Sbjct: 1306 TCESSKDETFWRELPSVPSLDLFRASDSNAN 1336
>gi|124028515 hypothetical protein LOC158401 isoform 1 [Homo sapiens]
Length = 1444
Score = 33.5 bits (75), Expect = 0.21
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 10/91 (10%)
Query: 53 LNGTSDTWYQEFKAIIREQQTRPI-------WTAEDKL---DGSLEDNPHRGLADSSADL 102
L GT + FK I EQ+ P TA +KL G+L + + L+D S L
Sbjct: 1285 LEGTQSPLHWNFKKNIWEQENHPFNLQYGAQQTACNKLYSQKGNLFTDQQKCLSDESEGL 1344
Query: 103 SCDSRVNSDYWRRRKARAARTLMASATQTAS 133
+C+S + +WR + + L ++ A+
Sbjct: 1345 TCESSKDETFWRELPSVPSLDLFRASDSNAN 1375
>gi|170784854 PTPRF interacting protein, binding protein 2 (liprin
beta 2) [Homo sapiens]
Length = 876
Score = 33.1 bits (74), Expect = 0.27
Identities = 25/96 (26%), Positives = 37/96 (38%), Gaps = 9/96 (9%)
Query: 117 KARAARTLMASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGP 176
+ RA + L S S D P P L+ P A E + P + G++S
Sbjct: 377 ETRAQKKLSCSLEDLRSESVDKCMDGNQPFPVLEPKDSPFLA-EHKYPTLPGKLSGAT-- 433
Query: 177 QVDSPHPQGQRRQDSMRTCEPEALKKKFTRVRDAES 212
P G+ + C+P+A R+RD ES
Sbjct: 434 ------PNGEAAKSPPTICQPDATGSSLLRLRDTES 463
>gi|7706589 GNAS complex locus NESP55 [Homo sapiens]
Length = 245
Score = 32.7 bits (73), Expect = 0.35
Identities = 22/80 (27%), Positives = 30/80 (37%), Gaps = 3/80 (3%)
Query: 143 ELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDSPHPQGQRRQDSMRTCEPEALKK 202
+L +P S P EPQSPR + D + + + R C+P KK
Sbjct: 167 KLRSPDASPSRAPPSTQEPQSPREGEELKPEDKDPRDPEESKEPKEEKQRRRCKP---KK 223
Query: 203 KFTRVRDAESPMKMATTGVR 222
R ESP K +R
Sbjct: 224 PTRRDASPESPSKKGPIPIR 243
>gi|195539337 S-adenosylhomocysteine hydrolase-like 2 isoform b
[Homo sapiens]
Length = 610
Score = 32.3 bits (72), Expect = 0.46
Identities = 34/139 (24%), Positives = 52/139 (37%), Gaps = 11/139 (7%)
Query: 125 MASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQS--PRVRGRISAHQGPQVDSPH 182
+++A A P D E PAPA +R P P + G++ + PH
Sbjct: 33 LSTAAVGAMAPPAGGGDPEAPAPAAERPPVPGPGSGPAAALSPAAGKVPQASAMKRSDPH 92
Query: 183 PQGQRRQDSMR---------TCEPEALKKKFTRVRDAESPMKMATTGVRPLTCDLSQAAS 233
Q QR +D T P +KK + E + G R L+ +SQ+++
Sbjct: 93 HQHQRHRDGGEALVSPDGTVTEAPRTVKKIQFADQKQEFNKRPTKIGRRSLSRSISQSST 152
Query: 234 WSVLLLPSWGWDSVSCTEP 252
S S+ S T P
Sbjct: 153 DSYSSAASYTDSSDDETSP 171
>gi|24308043 S-adenosylhomocysteine hydrolase-like 2 isoform a [Homo
sapiens]
Length = 611
Score = 32.3 bits (72), Expect = 0.46
Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 12/140 (8%)
Query: 125 MASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQS--PRVRGRISAHQGPQVDSPH 182
+++A A P D E PAPA +R P P + G++ + PH
Sbjct: 33 LSTAAVGAMAPPAGGGDPEAPAPAAERPPVPGPGSGPAAALSPAAGKVPQASAMKRSDPH 92
Query: 183 PQGQRRQDSMR---------TCEPEALKKKFTRVRDAESPMKMAT-TGVRPLTCDLSQAA 232
Q QR +D T P +KK+ + K T G R L+ +SQ++
Sbjct: 93 HQHQRHRDGGEALVSPDGTVTEAPRTVKKQIQFADQKQEFNKRPTKIGRRSLSRSISQSS 152
Query: 233 SWSVLLLPSWGWDSVSCTEP 252
+ S S+ S T P
Sbjct: 153 TDSYSSAASYTDSSDDETSP 172
>gi|91208437 GEM interacting protein [Homo sapiens]
Length = 970
Score = 32.3 bits (72), Expect = 0.46
Identities = 29/112 (25%), Positives = 45/112 (40%), Gaps = 15/112 (13%)
Query: 135 GPYTDADDELPAPALDRSSEP--VQADEPQSPRVRGRISAHQ-GPQVDSPHPQGQRRQDS 191
GP T + P P LD S+P + +D P+ + H + P PQ +R+D
Sbjct: 778 GPLTTSSQP-PPPHLDPDSQPPVLASDPGPDPQHHSTLEQHPTATPTEIPTPQSDQREDV 836
Query: 192 MRTCEP-----------EALKKKFTRVRDAESPMKMATTGVRPLTCDLSQAA 232
+ ++L +R + P+K GVRP+T LS A
Sbjct: 837 AEDTKDGGGEVSSQGPEDSLLGTQSRGHFSRQPVKYPRGGVRPVTHQLSSLA 888
>gi|22538461 nuclear receptor co-repressor 1 [Homo sapiens]
Length = 2440
Score = 32.0 bits (71), Expect = 0.60
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 8/80 (10%)
Query: 80 EDKLDGSLEDNPHRGLADSSADLSCDSRVNSDYWRRRKARAARTLM--ASATQTASGGPY 137
+DK+DG+ E+ R A + +S+ RRK R R++ A+A A+
Sbjct: 551 KDKIDGTAEETEEREQATPRGRKTANSQ------GRRKGRITRSMTNEAAAASAAAAAAT 604
Query: 138 TDADDELPAPALDRSSEPVQ 157
+ LP P S+EPV+
Sbjct: 605 EEPPPPLPPPPEPISTEPVE 624
>gi|148539628 discs, large homolog 1 isoform 1 [Homo sapiens]
Length = 904
Score = 32.0 bits (71), Expect = 0.60
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 6 KRKRKFMDLHKELSWLAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTWYQEFK 65
K M+++K L+ R+ + +A KL ++ + FTA + T + Y + K
Sbjct: 833 KSMENIMEMNKRLTE------EQARKTFERAMKLEQEFTEHFTAIVQ-GDTLEDIYNQVK 885
Query: 66 AIIREQQTRPIWT-AEDKL 83
II EQ IW A++KL
Sbjct: 886 QIIEEQSGSYIWVPAKEKL 904
>gi|148539578 discs, large homolog 1 isoform 2 [Homo sapiens]
Length = 926
Score = 32.0 bits (71), Expect = 0.60
Identities = 23/79 (29%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 6 KRKRKFMDLHKELSWLAPASCRSTRRLYAQAQKLRKQSSHLFTATIPLNGTSDTWYQEFK 65
K M+++K L+ R+ + +A KL ++ + FTA + T + Y + K
Sbjct: 855 KSMENIMEMNKRLTE------EQARKTFERAMKLEQEFTEHFTAIVQ-GDTLEDIYNQVK 907
Query: 66 AIIREQQTRPIWT-AEDKL 83
II EQ IW A++KL
Sbjct: 908 QIIEEQSGSYIWVPAKEKL 926
>gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens]
Length = 1243
Score = 31.6 bits (70), Expect = 0.78
Identities = 51/217 (23%), Positives = 75/217 (34%), Gaps = 31/217 (14%)
Query: 70 EQQTRPIWTAEDKLDGSLEDNPHRGLADSSADLSCDSRVNSDYWRRRKARAARTLMAS-A 128
++ T P+ AED L E P L D S + +S R A T +S
Sbjct: 749 KRDTGPMEAAEDTLSPQEEPAPLPALPVPLPDPSNEELQSSTSLEHRSWTAFSTSSSSPG 808
Query: 129 TQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDS-------- 180
T + G P++ P P +S P + ++S++ P S
Sbjct: 809 TPLSPGNPFSPGTPISPGPIFPITSPPCHPSPSPFSPISSQVSSNPSPHPTSSPLPFSSS 868
Query: 181 ----PHPQGQRRQDSMRTCEPEALKKKFTRVR-------DAESPMKMATTGVRPLTCDLS 229
P P Q S+ T P ++V S +T PL LS
Sbjct: 869 TPEFPVPLSQCPWSSLPTTSPPTFSPTCSQVTLSSPFFPPCPSTSSFPSTTAAPL---LS 925
Query: 230 QAASWSV--------LLLPSWGWDSVSCTEPTTSPPS 258
A+++S+ LL PS G S S P + PS
Sbjct: 926 LASAFSLAVMTVAQSLLSPSPGLLSQSPPAPPSPLPS 962
>gi|124430752 kinesin family member 26B [Homo sapiens]
Length = 2108
Score = 31.6 bits (70), Expect = 0.78
Identities = 33/92 (35%), Positives = 41/92 (44%), Gaps = 12/92 (13%)
Query: 114 RRRKARAARTLMASATQ-TASGGPYTDADD-ELPAPALDRSSEPVQA------DEPQSPR 165
R +A A L S + S G T+ + ELPA + RS PV A P SPR
Sbjct: 964 RLSQAAGASPLSESDKEDNGSEGQLTNREGPELPASKMQRSHSPVPAAAPAHSPSPASPR 1023
Query: 166 -VRGRISAHQ-GPQVDSPHPQGQRRQDSMRTC 195
V G S H P V SP Q R +S+ +C
Sbjct: 1024 SVPGSSSQHSASPLVQSPSLQSSR--ESLNSC 1053
>gi|169206171 PREDICTED: hypothetical protein [Homo sapiens]
Length = 466
Score = 31.2 bits (69), Expect = 1.0
Identities = 28/105 (26%), Positives = 44/105 (41%), Gaps = 13/105 (12%)
Query: 114 RRRKARAARTLMASATQTASGGPYTDADDELPAPALDRS-SEPVQADEPQSPRVR----- 167
R+R+ ART + + GP D PAP+ +S P A + P +
Sbjct: 94 RQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASG 153
Query: 168 -GRISAHQGPQVDSP-----HPQGQRRQDSMRTCEPEALKKKFTR 206
G ++H GP+ +P G RR+ + C P L+K +R
Sbjct: 154 GGGRASHSGPRAGTPGGGRSSRAGARRKTPLSLC-PLKLRKGSSR 197
>gi|239751180 PREDICTED: hypothetical protein XP_002347740 [Homo
sapiens]
Length = 331
Score = 31.2 bits (69), Expect = 1.0
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 122 RTLMASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDSP 181
R +A+ + SGG + D E + AL E P +P ++G A Q PQ +P
Sbjct: 92 RGALAAVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNP-LQGISQAPQRPQ--AP 148
Query: 182 HPQGQRRQDSMRTCEPEALKKKFTRVRDAESPMKMATTGVR 222
P+G Q C ++++ TRV A S + +TT +R
Sbjct: 149 GPRGAAEQSQGSPC----VRQEKTRVSGALS--RPSTTELR 183
>gi|239745668 PREDICTED: hypothetical protein XP_002343538 [Homo
sapiens]
Length = 305
Score = 31.2 bits (69), Expect = 1.0
Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 122 RTLMASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGPQVDSP 181
R +A+ + SGG + D E + AL E P +P ++G A Q PQ +P
Sbjct: 66 RGALAAVLKFPSGGRQNEGDSENVSAALALGEEARGPPSPLNP-LQGISQAPQRPQ--AP 122
Query: 182 HPQGQRRQDSMRTCEPEALKKKFTRVRDAESPMKMATTGVR 222
P+G Q C ++++ TRV A S + +TT +R
Sbjct: 123 GPRGAAEQSQGSPC----VRQEKTRVSGALS--RPSTTELR 157
>gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo
sapiens]
Length = 380
Score = 31.2 bits (69), Expect = 1.0
Identities = 20/78 (25%), Positives = 39/78 (50%), Gaps = 12/78 (15%)
Query: 140 ADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQGP---------QVDSPHPQGQRRQD 190
ADD L P L +++ +A++P P+ R R + + P +V+SP +RR
Sbjct: 299 ADDNLKTPPL--ATQEAEAEKPPKPK-RWRAAEMESPPEPKRRRAAEVESPPEPKRRRAA 355
Query: 191 SMRTCEPEALKKKFTRVR 208
+ PE +++ +++R
Sbjct: 356 EVEPSSPEPKRRRLSKLR 373
>gi|169206489 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 30.8 bits (68), Expect = 1.3
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 13/105 (12%)
Query: 114 RRRKARAARTLMASATQTASGGPYTDADDELPAPALDRS-SEPVQADEPQSPRVR----- 167
R+R+ ART + + GP D PAP+ +S P A + P +
Sbjct: 94 RQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASG 153
Query: 168 -GRISAHQGPQVDSP-----HPQGQRRQDSMRTCEPEALKKKFTR 206
G +H GP+ +P G RR+ + C P L+K +R
Sbjct: 154 GGGRGSHSGPRAGTPGGGRSSRAGARRKTPLSLC-PLKLRKGSSR 197
>gi|169162152 PREDICTED: hypothetical protein [Homo sapiens]
Length = 520
Score = 30.8 bits (68), Expect = 1.3
Identities = 20/74 (27%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Query: 115 RRKARAARTLMASATQTASGGPYTDADDELPAPALDRSSEPVQADEPQSPRVRGRISAHQ 174
+ + R+ + S T+ G + + P P R + P+ P GR+SA
Sbjct: 105 QERGRSKPSPPVSGTRRGKTGQWKEGRGSHPTPEPQRLAARRWLHSPREPTPPGRLSA-- 162
Query: 175 GPQVDSPHPQGQRR 188
P PHPQ RR
Sbjct: 163 -PPRHGPHPQSFRR 175
>gi|169205942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 564
Score = 30.8 bits (68), Expect = 1.3
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 13/105 (12%)
Query: 114 RRRKARAARTLMASATQTASGGPYTDADDELPAPALDRS-SEPVQADEPQSPRVR----- 167
R+R+ ART + + GP D PAP+ +S P A + P +
Sbjct: 94 RQRRTSRARTALWGRRSRRAAGPGLDCAGSAPAPSGAQSCGGPAPASALRRPLTQWDASG 153
Query: 168 -GRISAHQGPQVDSP-----HPQGQRRQDSMRTCEPEALKKKFTR 206
G +H GP+ +P G RR+ + C P L+K +R
Sbjct: 154 GGGRGSHSGPRAGTPGGGRSSRAGARRKTPLSLC-PLKLRKGSSR 197
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.126 0.388
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,705,517
Number of Sequences: 37866
Number of extensions: 539917
Number of successful extensions: 2182
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 65
Number of HSP's that attempted gapping in prelim test: 2134
Number of HSP's gapped (non-prelim): 105
length of query: 274
length of database: 18,247,518
effective HSP length: 101
effective length of query: 173
effective length of database: 14,423,052
effective search space: 2495187996
effective search space used: 2495187996
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.