Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239747292
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747292 PREDICTED: hypothetical protein XP_002346413 [Homo
sapiens]
(281 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752774 PREDICTED: hypothetical protein [Homo sapiens] 576 e-165
gi|239747292 PREDICTED: hypothetical protein XP_002346413 [Homo ... 576 e-165
gi|239741116 PREDICTED: hypothetical protein XP_002342113 [Homo ... 576 e-165
gi|239756806 PREDICTED: hypothetical protein [Homo sapiens] 61 1e-09
gi|239751296 PREDICTED: hypothetical protein XP_002347798 [Homo ... 61 1e-09
gi|239745793 PREDICTED: hypothetical protein XP_002343590 [Homo ... 61 1e-09
gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [H... 32 0.62
gi|117938768 GNAS complex locus alex [Homo sapiens] 32 0.81
gi|239754006 PREDICTED: hypothetical protein [Homo sapiens] 31 1.4
gi|239748537 PREDICTED: hypothetical protein [Homo sapiens] 31 1.4
gi|239742520 PREDICTED: hypothetical protein [Homo sapiens] 31 1.4
gi|55749678 ninein-like [Homo sapiens] 31 1.4
gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F... 30 1.8
gi|24850133 protein inhibitor of activated STAT, 4 [Homo sapiens] 30 1.8
gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [H... 30 3.1
gi|121949802 cancer/testis antigen family 47, member A1 [Homo sa... 29 4.0
gi|121949798 cancer/testis antigen family 47, member A2 [Homo sa... 29 4.0
gi|121949773 cancer/testis antigen family 47, member A3 [Homo sa... 29 4.0
gi|121949771 cancer/testis antigen family 47, member A4 [Homo sa... 29 4.0
gi|121949796 cancer/testis antigen family 47, member A5 [Homo sa... 29 4.0
gi|121949794 cancer/testis antigen family 47, member A6 [Homo sa... 29 4.0
gi|121949792 cancer/testis antigen family 47, member A7 [Homo sa... 29 4.0
gi|121949790 cancer/testis antigen family 47, member A8 [Homo sa... 29 4.0
gi|121949788 cancer/testis antigen family 47, member A9 [Homo sa... 29 4.0
gi|121949786 cancer/testis antigen family 47, member A10 [Homo s... 29 4.0
gi|122114660 cancer/testis antigen family 47, member A11 [Homo s... 29 4.0
gi|239746020 PREDICTED: hypothetical protein XP_002344182 [Homo ... 29 5.3
gi|46593007 ubiquinol-cytochrome c reductase core protein I [Hom... 29 5.3
gi|187607364 tuftelin 1 isoform 2 [Homo sapiens] 29 5.3
gi|9910596 tuftelin 1 isoform 1 [Homo sapiens] 29 5.3
>gi|239752774 PREDICTED: hypothetical protein [Homo sapiens]
Length = 281
Score = 576 bits (1485), Expect = e-165
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MAGVTPAGALLDRTSGGGALNSAEGRGCCHLSGLPAGLLTSSPTLPTQPPHFPRNLTNIA 60
MAGVTPAGALLDRTSGGGALNSAEGRGCCHLSGLPAGLLTSSPTLPTQPPHFPRNLTNIA
Sbjct: 1 MAGVTPAGALLDRTSGGGALNSAEGRGCCHLSGLPAGLLTSSPTLPTQPPHFPRNLTNIA 60
Query: 61 LLKSHLWLPITFWASQDPVADEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNVAVHDVG 120
LLKSHLWLPITFWASQDPVADEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNVAVHDVG
Sbjct: 61 LLKSHLWLPITFWASQDPVADEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNVAVHDVG 120
Query: 121 AGGHVGTLHQARHIEAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACVVVQLGALV 180
AGGHVGTLHQARHIEAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACVVVQLGALV
Sbjct: 121 AGGHVGTLHQARHIEAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACVVVQLGALV 180
Query: 181 PVFLAVPALPLLTVGHVQDDQQRGACDEDELQGPEADVGDGEVVVVADVGAAGLLGVAVK 240
PVFLAVPALPLLTVGHVQDDQQRGACDEDELQGPEADVGDGEVVVVADVGAAGLLGVAVK
Sbjct: 181 PVFLAVPALPLLTVGHVQDDQQRGACDEDELQGPEADVGDGEVVVVADVGAAGLLGVAVK 240
Query: 241 VLLLIPPHALCSHHVYQHPEDEHHGQPDAPERCGVLVHTAQ 281
VLLLIPPHALCSHHVYQHPEDEHHGQPDAPERCGVLVHTAQ
Sbjct: 241 VLLLIPPHALCSHHVYQHPEDEHHGQPDAPERCGVLVHTAQ 281
>gi|239747292 PREDICTED: hypothetical protein XP_002346413 [Homo
sapiens]
Length = 281
Score = 576 bits (1485), Expect = e-165
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MAGVTPAGALLDRTSGGGALNSAEGRGCCHLSGLPAGLLTSSPTLPTQPPHFPRNLTNIA 60
MAGVTPAGALLDRTSGGGALNSAEGRGCCHLSGLPAGLLTSSPTLPTQPPHFPRNLTNIA
Sbjct: 1 MAGVTPAGALLDRTSGGGALNSAEGRGCCHLSGLPAGLLTSSPTLPTQPPHFPRNLTNIA 60
Query: 61 LLKSHLWLPITFWASQDPVADEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNVAVHDVG 120
LLKSHLWLPITFWASQDPVADEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNVAVHDVG
Sbjct: 61 LLKSHLWLPITFWASQDPVADEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNVAVHDVG 120
Query: 121 AGGHVGTLHQARHIEAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACVVVQLGALV 180
AGGHVGTLHQARHIEAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACVVVQLGALV
Sbjct: 121 AGGHVGTLHQARHIEAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACVVVQLGALV 180
Query: 181 PVFLAVPALPLLTVGHVQDDQQRGACDEDELQGPEADVGDGEVVVVADVGAAGLLGVAVK 240
PVFLAVPALPLLTVGHVQDDQQRGACDEDELQGPEADVGDGEVVVVADVGAAGLLGVAVK
Sbjct: 181 PVFLAVPALPLLTVGHVQDDQQRGACDEDELQGPEADVGDGEVVVVADVGAAGLLGVAVK 240
Query: 241 VLLLIPPHALCSHHVYQHPEDEHHGQPDAPERCGVLVHTAQ 281
VLLLIPPHALCSHHVYQHPEDEHHGQPDAPERCGVLVHTAQ
Sbjct: 241 VLLLIPPHALCSHHVYQHPEDEHHGQPDAPERCGVLVHTAQ 281
>gi|239741116 PREDICTED: hypothetical protein XP_002342113 [Homo
sapiens]
Length = 281
Score = 576 bits (1485), Expect = e-165
Identities = 281/281 (100%), Positives = 281/281 (100%)
Query: 1 MAGVTPAGALLDRTSGGGALNSAEGRGCCHLSGLPAGLLTSSPTLPTQPPHFPRNLTNIA 60
MAGVTPAGALLDRTSGGGALNSAEGRGCCHLSGLPAGLLTSSPTLPTQPPHFPRNLTNIA
Sbjct: 1 MAGVTPAGALLDRTSGGGALNSAEGRGCCHLSGLPAGLLTSSPTLPTQPPHFPRNLTNIA 60
Query: 61 LLKSHLWLPITFWASQDPVADEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNVAVHDVG 120
LLKSHLWLPITFWASQDPVADEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNVAVHDVG
Sbjct: 61 LLKSHLWLPITFWASQDPVADEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNVAVHDVG 120
Query: 121 AGGHVGTLHQARHIEAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACVVVQLGALV 180
AGGHVGTLHQARHIEAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACVVVQLGALV
Sbjct: 121 AGGHVGTLHQARHIEAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACVVVQLGALV 180
Query: 181 PVFLAVPALPLLTVGHVQDDQQRGACDEDELQGPEADVGDGEVVVVADVGAAGLLGVAVK 240
PVFLAVPALPLLTVGHVQDDQQRGACDEDELQGPEADVGDGEVVVVADVGAAGLLGVAVK
Sbjct: 181 PVFLAVPALPLLTVGHVQDDQQRGACDEDELQGPEADVGDGEVVVVADVGAAGLLGVAVK 240
Query: 241 VLLLIPPHALCSHHVYQHPEDEHHGQPDAPERCGVLVHTAQ 281
VLLLIPPHALCSHHVYQHPEDEHHGQPDAPERCGVLVHTAQ
Sbjct: 241 VLLLIPPHALCSHHVYQHPEDEHHGQPDAPERCGVLVHTAQ 281
>gi|239756806 PREDICTED: hypothetical protein [Homo sapiens]
Length = 211
Score = 60.8 bits (146), Expect = 1e-09
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 184 LAVPALPLLT--VGHVQDDQQRGACDEDELQGPEADVGDGEVVVVADVGAAGLLGVAVKV 241
LAV A LL V V D+Q RG ++ +++ PEA VGD E VVA + A L VA ++
Sbjct: 66 LAVHAARLLACPVHGVDDEQHRGRREQQDVEEPEAVVGDREGAVVAGLATARLQRVAHEL 125
Query: 242 LLLIPPHALCSHHVYQHPEDEHHGQPDAPERCGVLVHTAQ 281
LLL+ H +Q ED+H QP+A + +H Q
Sbjct: 126 LLLVLEHGAAHRGQHQDAEDQHDHQPEAAHERRLQLHGVQ 165
>gi|239751296 PREDICTED: hypothetical protein XP_002347798 [Homo
sapiens]
Length = 211
Score = 60.8 bits (146), Expect = 1e-09
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 184 LAVPALPLLT--VGHVQDDQQRGACDEDELQGPEADVGDGEVVVVADVGAAGLLGVAVKV 241
LAV A LL V V D+Q RG ++ +++ PEA VGD E VVA + A L VA ++
Sbjct: 66 LAVHAARLLACPVHGVDDEQHRGRREQQDVEEPEAVVGDREGAVVAGLATARLQRVAHEL 125
Query: 242 LLLIPPHALCSHHVYQHPEDEHHGQPDAPERCGVLVHTAQ 281
LLL+ H +Q ED+H QP+A + +H Q
Sbjct: 126 LLLVLEHGAAHRGQHQDAEDQHDHQPEAAHERRLQLHGVQ 165
>gi|239745793 PREDICTED: hypothetical protein XP_002343590 [Homo
sapiens]
Length = 211
Score = 60.8 bits (146), Expect = 1e-09
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 184 LAVPALPLLT--VGHVQDDQQRGACDEDELQGPEADVGDGEVVVVADVGAAGLLGVAVKV 241
LAV A LL V V D+Q RG ++ +++ PEA VGD E VVA + A L VA ++
Sbjct: 66 LAVHAARLLACPVHGVDDEQHRGRREQQDVEEPEAVVGDREGAVVAGLATARLQRVAHEL 125
Query: 242 LLLIPPHALCSHHVYQHPEDEHHGQPDAPERCGVLVHTAQ 281
LLL+ H +Q ED+H QP+A + +H Q
Sbjct: 126 LLLVLEHGAAHRGQHQDAEDQHDHQPEAAHERRLQLHGVQ 165
>gi|114205399 cyclic nucleotide gated channel beta 1 isoform a [Homo
sapiens]
Length = 1251
Score = 32.0 bits (71), Expect = 0.62
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 3/47 (6%)
Query: 134 IEAMPESVQQVEEEELNDELEDEAEQVGPPQ--ASVLL-ACVVVQLG 177
+E MP + ++EEE+ ++E E+E E+ + VLL +CVV Q+G
Sbjct: 340 VEKMPRELSRIEEEKEDEEEEEEEEEEEEEEEVTEVLLDSCVVSQVG 386
>gi|117938768 GNAS complex locus alex [Homo sapiens]
Length = 626
Score = 31.6 bits (70), Expect = 0.81
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 10 LLDRTSGGGALNSAEGRGCCHLSGLPAGLLTSSPTLPTQPP 50
LL R GG + +A C + G PA +T + T PT P
Sbjct: 483 LLARLPGGASPRAAAAAACTTMKGWPAATMTPAETSPTMGP 523
>gi|239754006 PREDICTED: hypothetical protein [Homo sapiens]
Length = 486
Score = 30.8 bits (68), Expect = 1.4
Identities = 58/194 (29%), Positives = 74/194 (38%), Gaps = 29/194 (14%)
Query: 93 ADGGGAHHEVGEDFLLGRSGNVAVHDVGAGG---HVG-TLHQARHI-----EAMPESVQQ 143
A+ AH V ED G A VG GG HVG + +A + A V Q
Sbjct: 149 AEQRAAHKHVAEDGGENEEGAEARVHVGVGGVRRHVGGPVDEAPGVWVLQPRATETHVGQ 208
Query: 144 VEEEELN--DELEDEAEQVGPPQASVLLACVVVQLGALV-PVFLAVPALPLLTVGHVQDD 200
+E + D E EA Q L+ V V++G + V L G +++
Sbjct: 209 RAKEHVGRIDCKEREARQS-------LVHVVAVEIGMVDGQVALDTHGADDAEAGQAEEE 261
Query: 201 QQRGACDEDELQ-GPEA--DVGDGEVV---VVADVGAAGLLGVAVKVLLLIPPHALCSHH 254
Q GA L GP A GDG VG + V+ LL+ L HH
Sbjct: 262 QNEGAVLAQRLAPGPLALHVRGDGHRAHQQSAQQVGDSQPTYQRVEGRLLLLLARLAQHH 321
Query: 255 ----VYQHPEDEHH 264
V HPEDEHH
Sbjct: 322 DGHQVAHHPEDEHH 335
>gi|239748537 PREDICTED: hypothetical protein [Homo sapiens]
Length = 486
Score = 30.8 bits (68), Expect = 1.4
Identities = 58/194 (29%), Positives = 74/194 (38%), Gaps = 29/194 (14%)
Query: 93 ADGGGAHHEVGEDFLLGRSGNVAVHDVGAGG---HVG-TLHQARHI-----EAMPESVQQ 143
A+ AH V ED G A VG GG HVG + +A + A V Q
Sbjct: 149 AEQRAAHKHVAEDGGENEEGAEARVHVGVGGVRRHVGGPVDEAPGVWVLQPRATETHVGQ 208
Query: 144 VEEEELN--DELEDEAEQVGPPQASVLLACVVVQLGALV-PVFLAVPALPLLTVGHVQDD 200
+E + D E EA Q L+ V V++G + V L G +++
Sbjct: 209 RAKEHVGRIDCKEREARQS-------LVHVVAVEIGMVDGQVALDTHGADDAEAGQAEEE 261
Query: 201 QQRGACDEDELQ-GPEA--DVGDGEVV---VVADVGAAGLLGVAVKVLLLIPPHALCSHH 254
Q GA L GP A GDG VG + V+ LL+ L HH
Sbjct: 262 QNEGAVLAQRLAPGPLALHVRGDGHRAHQQSAQQVGDSQPTYQRVEGRLLLLLARLAQHH 321
Query: 255 ----VYQHPEDEHH 264
V HPEDEHH
Sbjct: 322 DGHQVAHHPEDEHH 335
>gi|239742520 PREDICTED: hypothetical protein [Homo sapiens]
Length = 486
Score = 30.8 bits (68), Expect = 1.4
Identities = 58/194 (29%), Positives = 74/194 (38%), Gaps = 29/194 (14%)
Query: 93 ADGGGAHHEVGEDFLLGRSGNVAVHDVGAGG---HVG-TLHQARHI-----EAMPESVQQ 143
A+ AH V ED G A VG GG HVG + +A + A V Q
Sbjct: 149 AEQRAAHKHVAEDGGENEEGAEARVHVGVGGVRRHVGGPVDEAPGVWVLQPRATETHVGQ 208
Query: 144 VEEEELN--DELEDEAEQVGPPQASVLLACVVVQLGALV-PVFLAVPALPLLTVGHVQDD 200
+E + D E EA Q L+ V V++G + V L G +++
Sbjct: 209 RAKEHVGRIDCKEREARQS-------LVHVVAVEIGMVDGQVALDTHGADDAEAGQAEEE 261
Query: 201 QQRGACDEDELQ-GPEA--DVGDGEVV---VVADVGAAGLLGVAVKVLLLIPPHALCSHH 254
Q GA L GP A GDG VG + V+ LL+ L HH
Sbjct: 262 QNEGAVLAQRLAPGPLALHVRGDGHRAHQQSAQQVGDSQPTYQRVEGRLLLLLARLAQHH 321
Query: 255 ----VYQHPEDEHH 264
V HPEDEHH
Sbjct: 322 DGHQVAHHPEDEHH 335
>gi|55749678 ninein-like [Homo sapiens]
Length = 1382
Score = 30.8 bits (68), Expect = 1.4
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 21/138 (15%)
Query: 47 TQPPHFPRNLTNIALLKSHLWLPITFWASQDPVADEVAELT----DGEYDADG------- 95
T+ P T A LKSHLW + + + P +DE AE T + ++A G
Sbjct: 122 TEARRVPEQQTQ-ASLKSHLWRSASLESVESPKSDEEAESTKEAQNELFEAQGQLQTWDS 180
Query: 96 ---GGAHHEVGEDFLLGRSGNVAVHD---VGAGGHVGTLHQARHIEAMPESVQQVEEEEL 149
G F S V + VG+ GH+ Q + +Q +E+EEL
Sbjct: 181 EDFGSPQKSCSPSFDTPESQIRGVWEELGVGSSGHLS--EQELAVVCQSVGLQGLEKEEL 238
Query: 150 NDELEDEAEQVGPPQASV 167
D L ++ +Q G + S+
Sbjct: 239 ED-LFNKLDQDGDGKVSL 255
>gi|53832007 calcium channel, voltage-dependent, L type, alpha 1F
subunit [Homo sapiens]
Length = 1977
Score = 30.4 bits (67), Expect = 1.8
Identities = 31/104 (29%), Positives = 47/104 (45%), Gaps = 7/104 (6%)
Query: 117 HDVGAGGHVGTLHQARHIEAMPESVQ--QVEEEELNDELEDEAEQVGPPQASVLLACVVV 174
H G+G + T+ + + + Q Q E+EE+ D L EQ G P SVLL
Sbjct: 1718 HRRGSGALIFTIPEEGNSQPKGTKGQNKQDEDEEVPDRLSYLDEQAGTPPCSVLLPPHRA 1777
Query: 175 QL---GALVPVFLAVPALPL--LTVGHVQDDQQRGACDEDELQG 213
Q G LVP +P P +Q Q++G+C++ + G
Sbjct: 1778 QRYMDGHLVPRRRLLPPTPAGRKPSFTIQCLQRQGSCEDLPIPG 1821
>gi|24850133 protein inhibitor of activated STAT, 4 [Homo sapiens]
Length = 510
Score = 30.4 bits (67), Expect = 1.8
Identities = 26/102 (25%), Positives = 45/102 (44%), Gaps = 19/102 (18%)
Query: 80 ADEVAELTDGEY---DADGGGAHHEVGEDFLLGRS------------GNVAVHDVGAGGH 124
ADE+ L DG + A+ + G +LG S G+ A+ G GG
Sbjct: 393 ADEIEYLVDGSWCPIRAEKERSCSPQGAILVLGPSDANGLLPAPSVNGSGALGSTGGGGP 452
Query: 125 VGTLHQARH----IEAMPESVQQVEEEELNDELEDEAEQVGP 162
VG++ + ++ +S E+EE +E E++ ++ GP
Sbjct: 453 VGSMENGKPGADVVDLTLDSSSSSEDEEEEEEEEEDEDEEGP 494
>gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [Homo
sapiens]
Length = 627
Score = 29.6 bits (65), Expect = 3.1
Identities = 13/31 (41%), Positives = 21/31 (67%), Gaps = 2/31 (6%)
Query: 163 PQASVLLACVVVQLGALVPVFLAVPALPLLT 193
P++ ++L+C+ + G L+PV L P LP LT
Sbjct: 4 PRSGLILSCICLYCGVLLPVLL--PNLPFLT 32
>gi|121949802 cancer/testis antigen family 47, member A1 [Homo
sapiens]
Length = 288
Score = 29.3 bits (64), Expect = 4.0
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 81 DEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNV-AVHDVGAGGHVGTL-----HQARHI 134
D+ A ++ A+ GA ++ G D S V A VG G V L QA +
Sbjct: 13 DQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGL 72
Query: 135 EAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACV 172
A+P E+ ++ E+E E+ G A+ LA V
Sbjct: 73 AAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVV 110
>gi|121949798 cancer/testis antigen family 47, member A2 [Homo
sapiens]
Length = 288
Score = 29.3 bits (64), Expect = 4.0
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 81 DEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNV-AVHDVGAGGHVGTL-----HQARHI 134
D+ A ++ A+ GA ++ G D S V A VG G V L QA +
Sbjct: 13 DQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGL 72
Query: 135 EAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACV 172
A+P E+ ++ E+E E+ G A+ LA V
Sbjct: 73 AAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVV 110
>gi|121949773 cancer/testis antigen family 47, member A3 [Homo
sapiens]
Length = 288
Score = 29.3 bits (64), Expect = 4.0
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 81 DEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNV-AVHDVGAGGHVGTL-----HQARHI 134
D+ A ++ A+ GA ++ G D S V A VG G V L QA +
Sbjct: 13 DQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGL 72
Query: 135 EAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACV 172
A+P E+ ++ E+E E+ G A+ LA V
Sbjct: 73 AAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVV 110
>gi|121949771 cancer/testis antigen family 47, member A4 [Homo
sapiens]
Length = 288
Score = 29.3 bits (64), Expect = 4.0
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 81 DEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNV-AVHDVGAGGHVGTL-----HQARHI 134
D+ A ++ A+ GA ++ G D S V A VG G V L QA +
Sbjct: 13 DQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGL 72
Query: 135 EAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACV 172
A+P E+ ++ E+E E+ G A+ LA V
Sbjct: 73 AAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVV 110
>gi|121949796 cancer/testis antigen family 47, member A5 [Homo
sapiens]
Length = 288
Score = 29.3 bits (64), Expect = 4.0
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 81 DEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNV-AVHDVGAGGHVGTL-----HQARHI 134
D+ A ++ A+ GA ++ G D S V A VG G V L QA +
Sbjct: 13 DQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGL 72
Query: 135 EAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACV 172
A+P E+ ++ E+E E+ G A+ LA V
Sbjct: 73 AAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVV 110
>gi|121949794 cancer/testis antigen family 47, member A6 [Homo
sapiens]
Length = 288
Score = 29.3 bits (64), Expect = 4.0
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 81 DEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNV-AVHDVGAGGHVGTL-----HQARHI 134
D+ A ++ A+ GA ++ G D S V A VG G V L QA +
Sbjct: 13 DQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGL 72
Query: 135 EAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACV 172
A+P E+ ++ E+E E+ G A+ LA V
Sbjct: 73 AAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVV 110
>gi|121949792 cancer/testis antigen family 47, member A7 [Homo
sapiens]
Length = 288
Score = 29.3 bits (64), Expect = 4.0
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 81 DEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNV-AVHDVGAGGHVGTL-----HQARHI 134
D+ A ++ A+ GA ++ G D S V A VG G V L QA +
Sbjct: 13 DQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGL 72
Query: 135 EAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACV 172
A+P E+ ++ E+E E+ G A+ LA V
Sbjct: 73 AAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVV 110
>gi|121949790 cancer/testis antigen family 47, member A8 [Homo
sapiens]
Length = 288
Score = 29.3 bits (64), Expect = 4.0
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 81 DEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNV-AVHDVGAGGHVGTL-----HQARHI 134
D+ A ++ A+ GA ++ G D S V A VG G V L QA +
Sbjct: 13 DQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGL 72
Query: 135 EAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACV 172
A+P E+ ++ E+E E+ G A+ LA V
Sbjct: 73 AAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVV 110
>gi|121949788 cancer/testis antigen family 47, member A9 [Homo
sapiens]
Length = 288
Score = 29.3 bits (64), Expect = 4.0
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 81 DEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNV-AVHDVGAGGHVGTL-----HQARHI 134
D+ A ++ A+ GA ++ G D S V A VG G V L QA +
Sbjct: 13 DQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGL 72
Query: 135 EAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACV 172
A+P E+ ++ E+E E+ G A+ LA V
Sbjct: 73 AAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVV 110
>gi|121949786 cancer/testis antigen family 47, member A10 [Homo
sapiens]
Length = 288
Score = 29.3 bits (64), Expect = 4.0
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 81 DEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNV-AVHDVGAGGHVGTL-----HQARHI 134
D+ A ++ A+ GA ++ G D S V A VG G V L QA +
Sbjct: 13 DQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGL 72
Query: 135 EAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACV 172
A+P E+ ++ E+E E+ G A+ LA V
Sbjct: 73 AAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVV 110
>gi|122114660 cancer/testis antigen family 47, member A11 [Homo
sapiens]
Length = 288
Score = 29.3 bits (64), Expect = 4.0
Identities = 28/98 (28%), Positives = 42/98 (42%), Gaps = 6/98 (6%)
Query: 81 DEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNV-AVHDVGAGGHVGTL-----HQARHI 134
D+ A ++ A+ GA ++ G D S V A VG G V L QA +
Sbjct: 13 DQEAPVSQEGAQAEAAGAGNQEGGDSGPDSSDVVPAAEVVGVAGPVEGLGEEEGEQAAGL 72
Query: 135 EAMPESVQQVEEEELNDELEDEAEQVGPPQASVLLACV 172
A+P E+ ++ E+E E+ G A+ LA V
Sbjct: 73 AAVPRGGSAEEDSDIGPATEEEEEEEGNEAANFDLAVV 110
>gi|239746020 PREDICTED: hypothetical protein XP_002344182 [Homo
sapiens]
Length = 162
Score = 28.9 bits (63), Expect = 5.3
Identities = 21/69 (30%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
Query: 97 GAHHEVGEDFLLGRSGNVAVHDVGAGGHVGTLHQARHIEAMPESVQQVEEE--ELNDELE 154
G HH G + LLG G+ V G +ARH E V + +++ EL
Sbjct: 6 GGHHVPGVEHLLGELGH-GQGPVLLAAAAGERREARHEEVQAREGHHVHRQLAQVSIELA 64
Query: 155 DEAEQVGPP 163
EA++ G P
Sbjct: 65 REAQRGGDP 73
>gi|46593007 ubiquinol-cytochrome c reductase core protein I [Homo
sapiens]
Length = 480
Score = 28.9 bits (63), Expect = 5.3
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 73 WASQDPVADEVAELTDGEYDAD-GGGAH 99
WAS D VA +VA G YD GGG H
Sbjct: 296 WASPDNVALQVANAIIGHYDCTYGGGVH 323
>gi|187607364 tuftelin 1 isoform 2 [Homo sapiens]
Length = 365
Score = 28.9 bits (63), Expect = 5.3
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 13/86 (15%)
Query: 79 VADEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNVAVHDVGAG---GHVGTLHQARH-I 134
+A E+ E DG H E+ + +L GRSG+ +H+ V + +AR+ +
Sbjct: 38 LASELVESHDG---------HEEIIKVYLKGRSGDKMIHEKNINQLKSEVQYIQEARNCL 88
Query: 135 EAMPESVQQVEEEELNDELEDEAEQV 160
+ + E + + L D L + QV
Sbjct: 89 QKLREDISSKLDRNLGDSLHRQEIQV 114
>gi|9910596 tuftelin 1 isoform 1 [Homo sapiens]
Length = 390
Score = 28.9 bits (63), Expect = 5.3
Identities = 22/86 (25%), Positives = 39/86 (45%), Gaps = 13/86 (15%)
Query: 79 VADEVAELTDGEYDADGGGAHHEVGEDFLLGRSGNVAVHDVGAG---GHVGTLHQARH-I 134
+A E+ E DG H E+ + +L GRSG+ +H+ V + +AR+ +
Sbjct: 63 LASELVESHDG---------HEEIIKVYLKGRSGDKMIHEKNINQLKSEVQYIQEARNCL 113
Query: 135 EAMPESVQQVEEEELNDELEDEAEQV 160
+ + E + + L D L + QV
Sbjct: 114 QKLREDISSKLDRNLGDSLHRQEIQV 139
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.136 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,211,235
Number of Sequences: 37866
Number of extensions: 661493
Number of successful extensions: 3120
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 3073
Number of HSP's gapped (non-prelim): 69
length of query: 281
length of database: 18,247,518
effective HSP length: 101
effective length of query: 180
effective length of database: 14,423,052
effective search space: 2596149360
effective search space used: 2596149360
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.