Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239747286
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747286 PREDICTED: hypothetical protein XP_002346424 [Homo
sapiens]
(290 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239752780 PREDICTED: hypothetical protein [Homo sapiens] 550 e-157
gi|239747286 PREDICTED: hypothetical protein XP_002346424 [Homo ... 550 e-157
gi|239741110 PREDICTED: hypothetical protein XP_002342097 [Homo ... 550 e-157
gi|239747654 PREDICTED: hypothetical protein XP_002348126 [Homo ... 47 2e-05
gi|126352608 elastin isoform e precursor [Homo sapiens] 45 7e-05
gi|126352700 elastin isoform b precursor [Homo sapiens] 45 7e-05
gi|126352440 elastin isoform a precursor [Homo sapiens] 45 7e-05
gi|98986457 host cell factor 1 [Homo sapiens] 42 6e-04
gi|126352446 elastin isoform d precursor [Homo sapiens] 41 0.001
gi|126352322 elastin isoform c precursor [Homo sapiens] 41 0.001
gi|239740898 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239754269 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|169168665 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|113417486 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo ... 40 0.002
gi|239740777 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239740724 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239740674 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239740645 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|239513940 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002
gi|83367077 mucin 16 [Homo sapiens] 38 0.012
gi|91982772 mucin 17 [Homo sapiens] 37 0.027
gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo sa... 36 0.035
gi|13899309 ribosomal protein S6 kinase-like 1 [Homo sapiens] 35 0.059
gi|169166999 PREDICTED: hypothetical protein [Homo sapiens] 35 0.077
gi|169166785 PREDICTED: hypothetical protein [Homo sapiens] 35 0.077
gi|169166533 PREDICTED: hypothetical protein [Homo sapiens] 35 0.077
gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens] 35 0.10
gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo ... 35 0.10
gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo ... 35 0.10
>gi|239752780 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 550 bits (1417), Expect = e-157
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 1 MALSRRPGPGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLTGTS 60
MALSRRPGPGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLTGTS
Sbjct: 1 MALSRRPGPGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLTGTS 60
Query: 61 GSSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTS 120
GSSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTS
Sbjct: 61 GSSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTS 120
Query: 121 LGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGVLG 180
LGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGVLG
Sbjct: 121 LGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGVLG 180
Query: 181 VAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEGSS 240
VAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEGSS
Sbjct: 181 VAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEGSS 240
Query: 241 SNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDSCSKSEGPEPDPE 290
SNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDSCSKSEGPEPDPE
Sbjct: 241 SNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDSCSKSEGPEPDPE 290
>gi|239747286 PREDICTED: hypothetical protein XP_002346424 [Homo
sapiens]
Length = 290
Score = 550 bits (1417), Expect = e-157
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 1 MALSRRPGPGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLTGTS 60
MALSRRPGPGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLTGTS
Sbjct: 1 MALSRRPGPGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLTGTS 60
Query: 61 GSSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTS 120
GSSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTS
Sbjct: 61 GSSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTS 120
Query: 121 LGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGVLG 180
LGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGVLG
Sbjct: 121 LGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGVLG 180
Query: 181 VAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEGSS 240
VAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEGSS
Sbjct: 181 VAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEGSS 240
Query: 241 SNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDSCSKSEGPEPDPE 290
SNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDSCSKSEGPEPDPE
Sbjct: 241 SNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDSCSKSEGPEPDPE 290
>gi|239741110 PREDICTED: hypothetical protein XP_002342097 [Homo
sapiens]
Length = 290
Score = 550 bits (1417), Expect = e-157
Identities = 290/290 (100%), Positives = 290/290 (100%)
Query: 1 MALSRRPGPGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLTGTS 60
MALSRRPGPGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLTGTS
Sbjct: 1 MALSRRPGPGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLTGTS 60
Query: 61 GSSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTS 120
GSSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTS
Sbjct: 61 GSSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTS 120
Query: 121 LGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGVLG 180
LGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGVLG
Sbjct: 121 LGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGVLG 180
Query: 181 VAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEGSS 240
VAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEGSS
Sbjct: 181 VAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEGSS 240
Query: 241 SNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDSCSKSEGPEPDPE 290
SNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDSCSKSEGPEPDPE
Sbjct: 241 SNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDSCSKSEGPEPDPE 290
>gi|239747654 PREDICTED: hypothetical protein XP_002348126 [Homo
sapiens]
Length = 1032
Score = 47.0 bits (110), Expect = 2e-05
Identities = 58/192 (30%), Positives = 88/192 (45%), Gaps = 25/192 (13%)
Query: 8 GPGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLTGTSGSSRIVV 67
GPG+A V G A+ + P A S +VS G + GP SG + +V
Sbjct: 408 GPGKA---IVSGLGKAIVSGPGKAIVS-GPGKAIVSGPGKAIVS-GPGKAIVSGPGKAIV 462
Query: 68 RKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRAL--GREVAVLTSLGVGA 125
+ VC S+G V G+ ++SG G +V+G G+A+ G A+++SLG
Sbjct: 463 SSLGKAIVC----SLGKAIVSGPGKAIVSG-PGKAIVSGPGKAIVSGPGKAIISSLGKAI 517
Query: 126 SVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGA-AGVLGVAVA 184
S A+V G G + +VSG G+++ + L A+V+ G A LG A+
Sbjct: 518 VCSLGKAIVSGPGKA---------IVSGLGKAIVSS--LGKAIVSSLGKAIVSSLGKAIV 566
Query: 185 TVAGTVATVGSP 196
+ G A V SP
Sbjct: 567 SGPGK-AIVSSP 577
>gi|126352608 elastin isoform e precursor [Homo sapiens]
Length = 705
Score = 45.1 bits (105), Expect = 7e-05
Identities = 45/136 (33%), Positives = 54/136 (39%), Gaps = 15/136 (11%)
Query: 8 GPGRAPLGSVPGG------DDALAAAPPTATTSLAVSGCVVSSSGSSKSP-LGPPLTGTS 60
GPG PL VPGG L A P V G V ++ + K+ G L G
Sbjct: 57 GPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVP 116
Query: 61 GSSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTS 120
G V G+GV A PGA V G+V G+ G + L A V VL
Sbjct: 117 G--------VGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPG 168
Query: 121 LGVGASVSKTAAVVGG 136
+ GA V A VGG
Sbjct: 169 VPTGAGVKPKAPGVGG 184
Score = 38.1 bits (87), Expect = 0.009
Identities = 64/258 (24%), Positives = 85/258 (32%), Gaps = 28/258 (10%)
Query: 9 PGRAPLGSVPG----GDDALAAAPPTATTSLAVSGCVVSSSG-SSKSPLGPPLTGTSGSS 63
PG P G +PG G L P A G + +G P G P G
Sbjct: 147 PGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGY 206
Query: 64 RIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTSLGV 123
I K+ G T P P G +G +G G+G A +
Sbjct: 207 PIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKF 266
Query: 124 GASVSKTAAVVGGEGASGVVARAVATV--VSGRGRSLRTPVVLITAVVAVKGGAA----- 176
GA + VGG G GV A+ + ++G G A A G AA
Sbjct: 267 GAGAAGVLPGVGGAGVPGVPG-AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG 325
Query: 177 ------GVLGVAVATVAGT-VATVGSPVLV-AAVVAMVVETVVALWLGSSGTSVTTRGLV 228
GV+GV A V G V G PV+ A + V VV+ +
Sbjct: 326 GPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVS-------PEAAAKAAA 378
Query: 229 AGSRVGRSEGSSSNGVPT 246
++ G G G+PT
Sbjct: 379 KAAKYGARPGVGVGGIPT 396
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 45.1 bits (105), Expect = 7e-05
Identities = 45/136 (33%), Positives = 54/136 (39%), Gaps = 15/136 (11%)
Query: 8 GPGRAPLGSVPGG------DDALAAAPPTATTSLAVSGCVVSSSGSSKSP-LGPPLTGTS 60
GPG PL VPGG L A P V G V ++ + K+ G L G
Sbjct: 47 GPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVP 106
Query: 61 GSSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTS 120
G V G+GV A PGA V G+V G+ G + L A V VL
Sbjct: 107 G--------VGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPG 158
Query: 121 LGVGASVSKTAAVVGG 136
+ GA V A VGG
Sbjct: 159 VPTGAGVKPKAPGVGG 174
Score = 38.1 bits (87), Expect = 0.009
Identities = 64/258 (24%), Positives = 85/258 (32%), Gaps = 28/258 (10%)
Query: 9 PGRAPLGSVPG----GDDALAAAPPTATTSLAVSGCVVSSSG-SSKSPLGPPLTGTSGSS 63
PG P G +PG G L P A G + +G P G P G
Sbjct: 137 PGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGY 196
Query: 64 RIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTSLGV 123
I K+ G T P P G +G +G G+G A +
Sbjct: 197 PIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKF 256
Query: 124 GASVSKTAAVVGGEGASGVVARAVATV--VSGRGRSLRTPVVLITAVVAVKGGAA----- 176
GA + VGG G GV A+ + ++G G A A G AA
Sbjct: 257 GAGAAGVLPGVGGAGVPGVPG-AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG 315
Query: 177 ------GVLGVAVATVAGT-VATVGSPVLV-AAVVAMVVETVVALWLGSSGTSVTTRGLV 228
GV+GV A V G V G PV+ A + V VV+ +
Sbjct: 316 GPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVS-------PEAAAKAAA 368
Query: 229 AGSRVGRSEGSSSNGVPT 246
++ G G G+PT
Sbjct: 369 KAAKYGARPGVGVGGIPT 386
>gi|126352440 elastin isoform a precursor [Homo sapiens]
Length = 724
Score = 45.1 bits (105), Expect = 7e-05
Identities = 45/136 (33%), Positives = 54/136 (39%), Gaps = 15/136 (11%)
Query: 8 GPGRAPLGSVPGG------DDALAAAPPTATTSLAVSGCVVSSSGSSKSP-LGPPLTGTS 60
GPG PL VPGG L A P V G V ++ + K+ G L G
Sbjct: 57 GPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVP 116
Query: 61 GSSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTS 120
G V G+GV A PGA V G+V G+ G + L A V VL
Sbjct: 117 G--------VGGLGVSAGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGVGVLPG 168
Query: 121 LGVGASVSKTAAVVGG 136
+ GA V A VGG
Sbjct: 169 VPTGAGVKPKAPGVGG 184
Score = 38.1 bits (87), Expect = 0.009
Identities = 64/258 (24%), Positives = 85/258 (32%), Gaps = 28/258 (10%)
Query: 9 PGRAPLGSVPG----GDDALAAAPPTATTSLAVSGCVVSSSG-SSKSPLGPPLTGTSGSS 63
PG P G +PG G L P A G + +G P G P G
Sbjct: 147 PGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGY 206
Query: 64 RIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTSLGV 123
I K+ G T P P G +G +G G+G A +
Sbjct: 207 PIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKF 266
Query: 124 GASVSKTAAVVGGEGASGVVARAVATV--VSGRGRSLRTPVVLITAVVAVKGGAA----- 176
GA + VGG G GV A+ + ++G G A A G AA
Sbjct: 267 GAGAAGVLPGVGGAGVPGVPG-AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG 325
Query: 177 ------GVLGVAVATVAGT-VATVGSPVLV-AAVVAMVVETVVALWLGSSGTSVTTRGLV 228
GV+GV A V G V G PV+ A + V VV+ +
Sbjct: 326 GPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVS-------PEAAAKAAA 378
Query: 229 AGSRVGRSEGSSSNGVPT 246
++ G G G+PT
Sbjct: 379 KAAKYGARPGVGVGGIPT 396
>gi|98986457 host cell factor 1 [Homo sapiens]
Length = 2035
Score = 42.0 bits (97), Expect = 6e-04
Identities = 46/183 (25%), Positives = 70/183 (38%), Gaps = 25/183 (13%)
Query: 56 LTGTSGSSRIVVRKVSGVGVCREAT-----SVGPGAVVPRGRVLLSGMSGSWVVAGLGRA 110
+T G ++ G + T SV P P ++ + S ++ G
Sbjct: 725 VTSADGKPTTIITTTQASGAGTKPTILGISSVSPSTTKPGTTTIIKTIPMSAIITQAGAT 784
Query: 111 LGREVAVLTSLGVGASVS--KTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAV 168
V +S G+ + ++ T + G GA + AV + +G G+ T VVL
Sbjct: 785 -----GVTSSPGIKSPITIITTKVMTSGTGAPAKIITAVPKIATGHGQQGVTQVVL---- 835
Query: 169 VAVKGGAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLV 228
GA G G + TV + +PV V+AV V VV T VTT G V
Sbjct: 836 ----KGAPGQPGTILRTVPMGGVRLVTPVTVSAVKPAVTTLVV-----KGTTGVTTLGTV 886
Query: 229 AGS 231
G+
Sbjct: 887 TGT 889
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 40.8 bits (94), Expect = 0.001
Identities = 45/141 (31%), Positives = 55/141 (39%), Gaps = 20/141 (14%)
Query: 8 GPGRAPLGSVPGG------DDALAAAPPTATTSLAVSGCVVSSSGSSKSP-LGPPLTGTS 60
GPG PL VPGG L A P V G V ++ + K+ G L G
Sbjct: 57 GPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVP 116
Query: 61 GSSRIVVRKVSGVGVCREATSVG-----PGAVVPRGRVLLSGMSGSWVVAGLGRALGREV 115
G V G+GV + G PGA V G+V G+ G + L A V
Sbjct: 117 G--------VGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGV 168
Query: 116 AVLTSLGVGASVSKTAAVVGG 136
VL + GA V A VGG
Sbjct: 169 GVLPGVPTGAGVKPKAPGVGG 189
Score = 38.1 bits (87), Expect = 0.009
Identities = 64/258 (24%), Positives = 85/258 (32%), Gaps = 28/258 (10%)
Query: 9 PGRAPLGSVPG----GDDALAAAPPTATTSLAVSGCVVSSSG-SSKSPLGPPLTGTSGSS 63
PG P G +PG G L P A G + +G P G P G
Sbjct: 152 PGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGY 211
Query: 64 RIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTSLGV 123
I K+ G T P P G +G +G G+G A +
Sbjct: 212 PIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKF 271
Query: 124 GASVSKTAAVVGGEGASGVVARAVATV--VSGRGRSLRTPVVLITAVVAVKGGAA----- 176
GA + VGG G GV A+ + ++G G A A G AA
Sbjct: 272 GAGAAGVLPGVGGAGVPGVPG-AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG 330
Query: 177 ------GVLGVAVATVAGT-VATVGSPVLV-AAVVAMVVETVVALWLGSSGTSVTTRGLV 228
GV+GV A V G V G PV+ A + V VV+ +
Sbjct: 331 GPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVS-------PEAAAKAAA 383
Query: 229 AGSRVGRSEGSSSNGVPT 246
++ G G G+PT
Sbjct: 384 KAAKYGARPGVGVGGIPT 401
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 40.8 bits (94), Expect = 0.001
Identities = 45/141 (31%), Positives = 55/141 (39%), Gaps = 20/141 (14%)
Query: 8 GPGRAPLGSVPGG------DDALAAAPPTATTSLAVSGCVVSSSGSSKSP-LGPPLTGTS 60
GPG PL VPGG L A P V G V ++ + K+ G L G
Sbjct: 57 GPGGKPLKPVPGGLAGAGLGAGLGAFPAVTFPGALVPGGVADAAAAYKAAKAGAGLGGVP 116
Query: 61 GSSRIVVRKVSGVGVCREATSVG-----PGAVVPRGRVLLSGMSGSWVVAGLGRALGREV 115
G V G+GV + G PGA V G+V G+ G + L A V
Sbjct: 117 G--------VGGLGVSAAPSVPGAVVPQPGAGVKPGKVPGVGLPGVYPGGVLPGARFPGV 168
Query: 116 AVLTSLGVGASVSKTAAVVGG 136
VL + GA V A VGG
Sbjct: 169 GVLPGVPTGAGVKPKAPGVGG 189
Score = 38.1 bits (87), Expect = 0.009
Identities = 64/258 (24%), Positives = 85/258 (32%), Gaps = 28/258 (10%)
Query: 9 PGRAPLGSVPG----GDDALAAAPPTATTSLAVSGCVVSSSG-SSKSPLGPPLTGTSGSS 63
PG P G +PG G L P A G + +G P G P G
Sbjct: 152 PGVYPGGVLPGARFPGVGVLPGVPTGAGVKPKAPGVGGAFAGIPGVGPFGGPQPGVPLGY 211
Query: 64 RIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTSLGV 123
I K+ G T P P G +G +G G+G A +
Sbjct: 212 PIKAPKLPGGYGLPYTTGKLPYGYGPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKF 271
Query: 124 GASVSKTAAVVGGEGASGVVARAVATV--VSGRGRSLRTPVVLITAVVAVKGGAA----- 176
GA + VGG G GV A+ + ++G G A A G AA
Sbjct: 272 GAGAAGVLPGVGGAGVPGVPG-AIPGIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLVPG 330
Query: 177 ------GVLGVAVATVAGT-VATVGSPVLV-AAVVAMVVETVVALWLGSSGTSVTTRGLV 228
GV+GV A V G V G PV+ A + V VV+ +
Sbjct: 331 GPGFGPGVVGVPGAGVPGVGVPGAGIPVVPGAGIPGAAVPGVVS-------PEAAAKAAA 383
Query: 229 AGSRVGRSEGSSSNGVPT 246
++ G G G+PT
Sbjct: 384 KAAKYGARPGVGVGGIPT 401
>gi|239740898 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1542
Score = 40.4 bits (93), Expect = 0.002
Identities = 38/156 (24%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 119 TSLGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGV 178
T++ + AS + TA+ G E + + T+VS G + T + V +G
Sbjct: 47 TTILIKASETTTASTAGSETTTPSPTGSQTTIVSISGSEITTTSTAGSENTTVSSAGSGT 106
Query: 179 LGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEG 238
++A T++T GS ++ ET + +GS T+ +T + + V + G
Sbjct: 107 TTASMAGSESTISTAGSETTTVSITG--TETTMVSAMGSETTTNSTTS--SETTVTSTAG 162
Query: 239 SSSNGVPT-GWMFVVGSTAGVVDTARATSGLKRMAV 273
S + V T G TA TA +T+G + V
Sbjct: 163 SETTTVSTVGSETTTAYTADSETTAASTTGSEMTTV 198
Score = 29.3 bits (64), Expect = 4.2
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 174 GAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRG--LVAGS 231
G+ + + V+T S V V A ET+ A +GS T+V+T G S
Sbjct: 321 GSETTMASTIGPETTKVSTASSEV--TTVFAAGSETIRASTVGSETTTVSTTGSETTTAS 378
Query: 232 RVGRSEGSSSNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDS 278
+G + S TG ST G T +T G + VS S
Sbjct: 379 IMGSETSTDST---TGSETTTASTEGSETTTASTEGSEATTVSTTGS 422
>gi|239754269 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1531
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 119 TSLGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGV 178
T++ + AS + TA+ G E + + T+VS G + T + V +G
Sbjct: 26 TTILIKASETTTASTAGSETTTPSPTGSQTTIVSISGSEITTTSTAGSENTTVSSAGSGT 85
Query: 179 LGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEG 238
++A TV+T GS ++ ET + +GS T+ +T + + V + G
Sbjct: 86 TTASMAGSETTVSTAGSETTTVSITG--TETTMVSAMGSETTTNSTTS--SETTVTSTAG 141
Query: 239 SSSNGVPT-GWMFVVGSTAGVVDTARATSGLKRMAV 273
S + V T G TA TA +T+G + V
Sbjct: 142 SETTTVSTVGSETTTAYTADSETTAASTTGSEMTTV 177
Score = 29.3 bits (64), Expect = 4.2
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 174 GAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRG--LVAGS 231
G+ + + V+T S V V A ET+ A +GS T+V+T G S
Sbjct: 300 GSETTMASTIGPETTKVSTASSEV--TTVFAAGSETIRASTVGSETTTVSTTGSETTTAS 357
Query: 232 RVGRSEGSSSNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDS 278
+G + S TG ST G T +T G + VS S
Sbjct: 358 IMGSETSTDST---TGSETTTASTEGSETTTASTEGSEATTVSTTGS 401
>gi|169168665 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1521
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 119 TSLGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGV 178
T++ + AS + TA+ G E + + T+VS G + T + V +G
Sbjct: 26 TTILIKASETTTASTAGSETTTPSPTGSQTTIVSISGSEITTTSTAGSENTTVSSAGSGT 85
Query: 179 LGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEG 238
++A TV+T GS ++ ET + +GS T+ +T + + V + G
Sbjct: 86 TTASMAGSETTVSTAGSETTTVSITG--TETTMVSAMGSETTTNSTTS--SETTVTSTAG 141
Query: 239 SSSNGVPT-GWMFVVGSTAGVVDTARATSGLKRMAV 273
S + V T G TA TA +T+G + V
Sbjct: 142 SETTTVSTVGSETTTAYTADSETTAASTTGSEMTTV 177
Score = 29.3 bits (64), Expect = 4.2
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 174 GAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRG--LVAGS 231
G+ + + V+T S V V A ET+ A +GS T+V+T G S
Sbjct: 300 GSETTMASTIGPETTKVSTASSEV--TTVFAAGSETIRASTVGSETTTVSTTGSETTTAS 357
Query: 232 RVGRSEGSSSNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDS 278
+G + S TG ST G T +T G + VS S
Sbjct: 358 IMGSETSTDST---TGSETTTASTEGSETTTASTEGSEATTVSTTGS 401
>gi|113417486 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1612
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 119 TSLGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGV 178
T++ + AS + TA+ G E + + T+VS G + T + V +G
Sbjct: 26 TTILIKASETTTASTAGSETTTPSPTGSQTTIVSISGSEITTTSTAGSENTTVSSAGSGT 85
Query: 179 LGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEG 238
++A TV+T GS ++ ET + +GS T+ +T + + V + G
Sbjct: 86 TTASMAGSETTVSTAGSETTTVSITG--TETTMVSAMGSETTTNSTTS--SETTVTSTAG 141
Query: 239 SSSNGVPT-GWMFVVGSTAGVVDTARATSGLKRMAV 273
S + V T G TA TA +T+G + V
Sbjct: 142 SETTTVSTVGSETTTAYTADSETTAASTTGSEMTTV 177
Score = 29.3 bits (64), Expect = 4.2
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 174 GAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRG--LVAGS 231
G+ + + V+T S V V A ET+ A +GS T+V+T G S
Sbjct: 300 GSETTMASTIGPETTKVSTASSEV--TTVFAAGSETIRASTVGSETTTVSTTGSETTTAS 357
Query: 232 RVGRSEGSSSNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDS 278
+G + S TG ST G T +T G + VS S
Sbjct: 358 IMGSETSTDST---TGSETTTASTEGSETTTASTEGSEATTVSTTGS 401
>gi|239740827 PREDICTED: hypothetical protein XP_002344067 [Homo
sapiens]
Length = 1521
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 119 TSLGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGV 178
T++ + AS + TA+ G E + + T+VS G + T + V +G
Sbjct: 26 TTILIKASETTTASTAGSETTTPSPTGSQTTIVSISGSEITTTSTAGSENTTVSSAGSGT 85
Query: 179 LGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEG 238
++A TV+T GS ++ ET + +GS T+ +T + + V + G
Sbjct: 86 TTASMAGSETTVSTAGSETTTVSITG--TETTMVSAMGSETTTNSTTS--SETTVTSTAG 141
Query: 239 SSSNGVPT-GWMFVVGSTAGVVDTARATSGLKRMAV 273
S + V T G TA TA +T+G + V
Sbjct: 142 SETTTVSTVGSETTTAYTADSETTAASTTGSEMTTV 177
Score = 29.3 bits (64), Expect = 4.2
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 174 GAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRG--LVAGS 231
G+ + + V+T S V V A ET+ A +GS T+V+T G S
Sbjct: 300 GSETTMASTIGPETTKVSTASSEV--TTVFAAGSETIRASTVGSETTTVSTTGSETTTAS 357
Query: 232 RVGRSEGSSSNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDS 278
+G + S TG ST G T +T G + VS S
Sbjct: 358 IMGSETSTDST---TGSETTTASTEGSETTTASTEGSEATTVSTTGS 401
>gi|239740777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1612
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 119 TSLGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGV 178
T++ + AS + TA+ G E + + T+VS G + T + V +G
Sbjct: 26 TTILIKASETTTASTAGSETTTPSPTGSQTTIVSISGSEITTTSTAGSENTTVSSAGSGT 85
Query: 179 LGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEG 238
++A TV+T GS ++ ET + +GS T+ +T + + V + G
Sbjct: 86 TTASMAGSETTVSTAGSETTTVSITG--TETTMVSAMGSETTTNSTTS--SETTVTSTAG 141
Query: 239 SSSNGVPT-GWMFVVGSTAGVVDTARATSGLKRMAV 273
S + V T G TA TA +T+G + V
Sbjct: 142 SETTTVSTVGSETTTAYTADSETTAASTTGSEMTTV 177
Score = 29.3 bits (64), Expect = 4.2
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 174 GAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRG--LVAGS 231
G+ + + V+T S V V A ET+ A +GS T+V+T G S
Sbjct: 300 GSETTMASTIGPETTKVSTASSEV--TTVFAAGSETIRASTVGSETTTVSTTGSETTTAS 357
Query: 232 RVGRSEGSSSNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDS 278
+G + S TG ST G T +T G + VS S
Sbjct: 358 IMGSETSTDST---TGSETTTASTEGSETTTASTEGSEATTVSTTGS 401
>gi|239740724 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1704
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 119 TSLGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGV 178
T++ + AS + TA+ G E + + T+VS G + T + V +G
Sbjct: 26 TTILIKASETTTASTAGSETTTPSPTGSQTTIVSISGSEITTTSTAGSENTTVSSAGSGT 85
Query: 179 LGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEG 238
++A TV+T GS ++ ET + +GS T+ +T + + V + G
Sbjct: 86 TTASMAGSETTVSTAGSETTTVSITG--TETTMVSAMGSETTTNSTTS--SETTVTSTAG 141
Query: 239 SSSNGVPT-GWMFVVGSTAGVVDTARATSGLKRMAV 273
S + V T G TA TA +T+G + V
Sbjct: 142 SETTTVSTVGSETTTAYTADSETTAASTTGSEMTTV 177
Score = 29.3 bits (64), Expect = 4.2
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 174 GAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRG--LVAGS 231
G+ + + V+T S V V A ET+ A +GS T+V+T G S
Sbjct: 300 GSETTMASTIGPETTKVSTASSEV--TTVFAAGSETIRASTVGSETTTVSTTGSETTTAS 357
Query: 232 RVGRSEGSSSNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDS 278
+G + S TG ST G T +T G + VS S
Sbjct: 358 IMGSETSTDST---TGSETTTASTEGSETTTASTEGSEATTVSTTGS 401
>gi|239740674 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1531
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 119 TSLGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGV 178
T++ + AS + TA+ G E + + T+VS G + T + V +G
Sbjct: 26 TTILIKASETTTASTAGSETTTPSPTGSQTTIVSISGSEITTTSTAGSENTTVSSAGSGT 85
Query: 179 LGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEG 238
++A TV+T GS ++ ET + +GS T+ +T + + V + G
Sbjct: 86 TTASMAGSETTVSTAGSETTTVSITG--TETTMVSAMGSETTTNSTTS--SETTVTSTAG 141
Query: 239 SSSNGVPT-GWMFVVGSTAGVVDTARATSGLKRMAV 273
S + V T G TA TA +T+G + V
Sbjct: 142 SETTTVSTVGSETTTAYTADSETTAASTTGSEMTTV 177
Score = 29.3 bits (64), Expect = 4.2
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 174 GAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRG--LVAGS 231
G+ + + V+T S V V A ET+ A +GS T+V+T G S
Sbjct: 300 GSETTMASTIGPETTKVSTASSEV--TTVFAAGSETIRASTVGSETTTVSTTGSETTTAS 357
Query: 232 RVGRSEGSSSNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDS 278
+G + S TG ST G T +T G + VS S
Sbjct: 358 IMGSETSTDST---TGSETTTASTEGSETTTASTEGSEATTVSTTGS 401
>gi|239740645 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1531
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 119 TSLGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGV 178
T++ + AS + TA+ G E + + T+VS G + T + V +G
Sbjct: 26 TTILIKASETTTASTAGSETTTPSPTGSQTTIVSISGSEITTTSTAGSENTTVSSAGSGT 85
Query: 179 LGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEG 238
++A TV+T GS ++ ET + +GS T+ +T + + V + G
Sbjct: 86 TTASMAGSETTVSTAGSETTTVSITG--TETTMVSAMGSETTTNSTTS--SETTVTSTAG 141
Query: 239 SSSNGVPT-GWMFVVGSTAGVVDTARATSGLKRMAV 273
S + V T G TA TA +T+G + V
Sbjct: 142 SETTTVSTVGSETTTAYTADSETTAASTTGSEMTTV 177
Score = 29.3 bits (64), Expect = 4.2
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 174 GAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRG--LVAGS 231
G+ + + V+T S V V A ET+ A +GS T+V+T G S
Sbjct: 300 GSETTMASTIGPETTKVSTASSEV--TTVFAAGSETIRASTVGSETTTVSTTGSETTTAS 357
Query: 232 RVGRSEGSSSNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDS 278
+G + S TG ST G T +T G + VS S
Sbjct: 358 IMGSETSTDST---TGSETTTASTEGSETTTASTEGSEATTVSTTGS 401
>gi|239513940 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1521
Score = 40.0 bits (92), Expect = 0.002
Identities = 39/156 (25%), Positives = 66/156 (42%), Gaps = 5/156 (3%)
Query: 119 TSLGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGV 178
T++ + AS + TA+ G E + + T+VS G + T + V +G
Sbjct: 26 TTILIKASETTTASTAGSETTTPSPTGSQTTIVSISGSEITTTSTAGSENTTVSSAGSGT 85
Query: 179 LGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRGLVAGSRVGRSEG 238
++A TV+T GS ++ ET + +GS T+ +T + + V + G
Sbjct: 86 TTASMAGSETTVSTAGSETTTVSITG--TETTMVSAMGSETTTNSTTS--SETTVTSTAG 141
Query: 239 SSSNGVPT-GWMFVVGSTAGVVDTARATSGLKRMAV 273
S + V T G TA TA +T+G + V
Sbjct: 142 SETTTVSTVGSETTTAYTADSETTAASTTGSEMTTV 177
Score = 29.3 bits (64), Expect = 4.2
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 7/107 (6%)
Query: 174 GAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSVTTRG--LVAGS 231
G+ + + V+T S V V A ET+ A +GS T+V+T G S
Sbjct: 300 GSETTMASTIGPETTKVSTASSEV--TTVFAAGSETIRASTVGSETTTVSTTGSETTTAS 357
Query: 232 RVGRSEGSSSNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDS 278
+G + S TG ST G T +T G + VS S
Sbjct: 358 IMGSETSTDST---TGSETTTASTEGSETTTASTEGSEATTVSTTGS 401
>gi|83367077 mucin 16 [Homo sapiens]
Length = 14507
Score = 37.7 bits (86), Expect = 0.012
Identities = 75/304 (24%), Positives = 119/304 (39%), Gaps = 41/304 (13%)
Query: 3 LSRRPG-PGRAPLGSVPGGDDALAAAPPTATTSLAVSGCV---VSSSGSSKSPLGPPLTG 58
L+ PG P P + G++A ++A PT T S V G V V+SS + S P LT
Sbjct: 10896 LTLSPGEPETTPSMATSHGEEA-SSAIPTPTVSPGVPGVVTSLVTSSRAVTSTTIPILTF 10954
Query: 59 TSGSSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAG-----LGRALGR 113
+ G + G EA S P + ++ S ++ S V L + G
Sbjct: 10955 SLGEPETTPSMATSHGT--EAGSAVPTVLPEVPGMVTSLVASSRAVTSTTLPTLTLSPGE 11012
Query: 114 -EVAVLTSLGVGASVSKTAAVVGGE----------GASGVVARAVATVVSGRGRSLRTPV 162
E + GA S T V E +SGV + ++ T++ G TP
Sbjct: 11013 PETTPSMATSHGAEASSTVPTVSPEVPGVVTSLVTSSSGVNSTSIPTLILSPGELETTP- 11071
Query: 163 VLITAVVAVKGGAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSV 222
+A GA V TV+ V+ V +P++ ++ V T + + SS
Sbjct: 11072 -----SMATSHGAEASSAVPTPTVSPGVSGVVTPLVTSS--RAVTSTTIPILTLSSSEPE 11124
Query: 223 TTRGLVAGSRVGRSEGSSSNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSMPDSCSKS 282
TT + V +S+ V T V G +V ++RA + + ++P S
Sbjct: 11125 TTPSMATSHGV-----EASSAVLTVSPEVPGMVTSLVTSSRAVT-----STTIPTLTISS 11174
Query: 283 EGPE 286
+ PE
Sbjct: 11175 DEPE 11178
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 36.6 bits (83), Expect = 0.027
Identities = 70/301 (23%), Positives = 115/301 (38%), Gaps = 42/301 (13%)
Query: 10 GRAPLGSVPGGDDALAA--APPTATTSLAVSGCVVSSSGSSKSPLG------PPLTGTSG 61
G PL +P +A+ A +TT + S V +SS ++ SP P T G
Sbjct: 3456 GSTPLSIMPLSTTPVASSEASTLSTTPVDTSTPVTTSSPTNSSPTTAEVTSMPTSTAGEG 3515
Query: 62 SSRIVVRKVSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGR-------- 113
S+ + VS V S V + S S A L R
Sbjct: 3516 STPLTNMPVSTTPVASSEASTLSTTPVDSNTFVTSSSQASSSPATLQVTTMRMSTPSEGS 3575
Query: 114 ---EVAVLTSLGVGASVSKTAAVVGGEGASGVVARAVATVVSGRGRSLRTPVVLITAVVA 170
+L+S V +S + T + V R+ S + S TP +IT ++
Sbjct: 3576 SSLTTMLLSSTYVTSSEASTPSTPS-------VDRSTPVTTSTQSNSTPTPPEVITLPMS 3628
Query: 171 VKGGAAGVLGVA-VATVAGTVATVGS----------PVLVAAVVAMVVET----VVALWL 215
+ L + V+T + T++ G+ PV+ + V+ T + +W
Sbjct: 3629 TPSEVSTPLTIMPVSTTSVTISEAGTASTLPVDTSTPVITSTQVSSSPVTPEGTTMPIWT 3688
Query: 216 GSSGTSVTTRGLVAGSRVGRSEGSSSNGVPTGWMFVVGSTAGVVDTARATSGLKRMAVSM 275
S G++ T V+ +RV SEGS+ + P+ +T+ ++ AT M+VSM
Sbjct: 3689 PSEGSTPLTTMPVSTTRVTSSEGSTLS-TPSVVTSTPVTTSTEAISSSATLDSTTMSVSM 3747
Query: 276 P 276
P
Sbjct: 3748 P 3748
Score = 34.7 bits (78), Expect = 0.10
Identities = 74/311 (23%), Positives = 114/311 (36%), Gaps = 40/311 (12%)
Query: 7 PGPGRAPLGSVPGGDDALA--AAPPTATTSLAVSGCVVSSSGSSKSPLGPPLTGTS---- 60
P G+ PL S+P + +A A +TT + + VV+S+ S SP P GTS
Sbjct: 1450 PSEGKTPLKSIPVSNTPVANSEASTLSTTPVDSNSPVVTSTAVSSSP--TPAEGTSIAIS 1507
Query: 61 ----GSSRIVVRKVSGVGVC-REATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREV 115
GS+ + VS V E S+ V V + S G ++
Sbjct: 1508 TPSEGSTALTSIPVSTTTVASSEINSLSTTPAVTSTPVTTYSQASSSPTTADGTSMQTST 1567
Query: 116 -----AVLTSLGVG-----ASVSKTAAVVGGEGASGVVARAVA---TVVSGRGRSLRTPV 162
LTSL V +S + T + + + V A A T G ++ TP
Sbjct: 1568 YSEGSTPLTSLPVSTMLVVSSEANTLSTTPIDSKTQVTASTEASSSTTAEGSSMTISTPS 1627
Query: 163 VLITAVVAVKGGAAGVLGVAVATVAGTVATVGSPVLVAAVVAMVVETVVALWLGSSGTSV 222
+ ++ V +T++ T SPV+ + V+ + GTS+
Sbjct: 1628 EGSPLLTSIPVSTTPVASPEASTLSTTPVDSNSPVITSTEVSSSPTP-------AEGTSM 1680
Query: 223 TTRGLVAG-----SRVGRSEGSSSNGVPT-GWMFVVGSTAGVVDTARATSGLKRMAVSMP 276
T G S R+ +S+ + T V ST T +S SMP
Sbjct: 1681 PTSTYTEGRTPLTSITVRTTPVASSAISTLSTTPVDNSTPVTTSTEARSSPTTSEGTSMP 1740
Query: 277 DSCSKSEGPEP 287
+S + SEG P
Sbjct: 1741 NS-TPSEGTTP 1750
Score = 33.5 bits (75), Expect = 0.22
Identities = 64/274 (23%), Positives = 105/274 (38%), Gaps = 27/274 (9%)
Query: 32 TTSLAVSGCVVSSSGSSKSPLGPPLTGTSGSSRIVVRKVSGVGVCREATSVGPGAVVPRG 91
TTS S ++ G+S P+ P ++ + I+V V G EA+++ V R
Sbjct: 2901 TTSTEGSSSPTTAEGTSM-PISTPSEVSTPLTSILVSTVPVAG--SEASTLSTTPVDTRT 2957
Query: 92 RVLLSGMSGSWVVAGLGRAL-----GREVAVLTSLGVG---------ASVSKTAAVVGGE 137
V S + S G ++ G LTS+ V +++S+T A
Sbjct: 2958 PVTTSAEASSSPTTAEGTSMPISTPGERRTPLTSMSVSTMPVASSEASTLSRTPADTSTP 3017
Query: 138 GASGVVARAVATVVSGRGRSLRTPVVLITAVVAVKGGAAGVLGVAVATVAGTVATVGSPV 197
+ A + T G G + TP T + ++ V +T++ T SPV
Sbjct: 3018 VTTSTEASSSPTTAEGTGIPISTPSEGSTPLTSIPVSTTPVAIPEASTLSTTPVDSNSPV 3077
Query: 198 LVAAVVAM----VVETVVALWLGSSGTSVTTRGLVAGSRVGRSEGSSSNGVPTGWMFVVG 253
+ + V+ T + + S G++ T V+ + V S S+ + P V
Sbjct: 3078 VTSTEVSSSPTPAEGTSMPISTYSEGSTPLTGVPVSTTPVTSSAISTLSTTP-----VDT 3132
Query: 254 STAGVVDTARATSGLKRMAVSMPDSCSKSEGPEP 287
ST T +S SMP S + SEG P
Sbjct: 3133 STPVTTSTEAHSSPTTSEGTSMPTS-TPSEGSTP 3165
>gi|51702222 SPT2, Suppressor of Ty, domain containing 1 [Homo
sapiens]
Length = 685
Score = 36.2 bits (82), Expect = 0.035
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 8 GPGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLTGTSGSSRIVV 67
GPGR+ GS+P G + P +SL G VSSSG + P ++ T S I+
Sbjct: 491 GPGRSISGSIPAGRTVSNSVPGRPVSSLG-PGQTVSSSGPTIKPKCTVVSETISSKNIIS 549
Query: 68 RKVSG 72
R +G
Sbjct: 550 RSSNG 554
>gi|13899309 ribosomal protein S6 kinase-like 1 [Homo sapiens]
Length = 541
Score = 35.4 bits (80), Expect = 0.059
Identities = 35/118 (29%), Positives = 52/118 (44%), Gaps = 7/118 (5%)
Query: 9 PGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLTGTSGSSRIVVR 68
P R P G P G D +A PP + +L ++G S+ + G P TS S +
Sbjct: 231 PARLPSGHAP-GQDRIALEPPRTSPNLLLAG-EAPSTRPQREAEGEPTARTSTSGSSDLP 288
Query: 69 KVSGVGVCREATSVGPG--AVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTSLGVG 124
K G + +A G A PRG + +G V+ G GR G + + L++ G G
Sbjct: 289 KAPGGHLHLQARRAGQNSDAGPPRGLTWVPEGAGP-VLGGCGR--GMDQSCLSADGAG 343
>gi|169166999 PREDICTED: hypothetical protein [Homo sapiens]
Length = 263
Score = 35.0 bits (79), Expect = 0.077
Identities = 50/207 (24%), Positives = 78/207 (37%), Gaps = 24/207 (11%)
Query: 35 LAVSGCVVSSSGSSKSPLGPPLTGTSGSSRIVVRKVSGVGVCREATSVGPGAVVPRGR-- 92
+ + VVS G G G++ + + G A VG AVV G
Sbjct: 65 VVIGAAVVSCGAGEDGGAGVVAEGVGGAAVVSGGAEADDGSRVVAEGVGGAAVVSGGAEE 124
Query: 93 -----VLLSGMSGSWVVAGLGRALGREVAVLTSLGVGASVSKTAAVVGGEG--ASGVVAR 145
V+ G+ G+ VV+G G V +G A VS A GG G A GV
Sbjct: 125 DGGAGVVAGGVGGAAVVSGGAEEDGGACVVAEGVGGAAVVSGGAEEDGGAGVVAEGVGGA 184
Query: 146 AVATVVSGR--GRSLRTPVVLITAVVAVKGGAAGVLGVAVATVAGTVATVGSPVLVAAVV 203
AV + +G G ++ T +++T L V G T G V++
Sbjct: 185 AVVSCGAGEFTGANVATEELVLTF----------SLEDMVVAFWGRKVTFGRVVILVEAD 234
Query: 204 AMVVETVVALWLGSSGTSVTTRGLVAG 230
V + +W+ ++ +TT ++G
Sbjct: 235 GKVTD---GIWVVATKVGLTTLLFLSG 258
Score = 32.0 bits (71), Expect = 0.65
Identities = 40/128 (31%), Positives = 52/128 (40%), Gaps = 14/128 (10%)
Query: 74 GVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTSLGVGASVSKTAAV 133
G C + P VV V G + V+G R +G E+ V+ +GA+V A
Sbjct: 23 GECFHLFLLCPENVVTEVVVWCVGAAEVSEVSG-ARVVGEELGVV----IGAAVVSCGA- 76
Query: 134 VGGEGASGVVARAV--ATVVSGRGRS---LRTPVVLITAVVAVKGGAA--GVLGVAVATV 186
G +G +GVVA V A VVSG + R + V GGA G GV V
Sbjct: 77 -GEDGGAGVVAEGVGGAAVVSGGAEADDGSRVVAEGVGGAAVVSGGAEEDGGAGVVAGGV 135
Query: 187 AGTVATVG 194
G G
Sbjct: 136 GGAAVVSG 143
>gi|169166785 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 35.0 bits (79), Expect = 0.077
Identities = 50/207 (24%), Positives = 78/207 (37%), Gaps = 24/207 (11%)
Query: 35 LAVSGCVVSSSGSSKSPLGPPLTGTSGSSRIVVRKVSGVGVCREATSVGPGAVVPRGR-- 92
+ + VVS G G G++ + + G A VG AVV G
Sbjct: 63 VVIGAAVVSCGAGEDGGAGVVAEGVGGAAVVSGGAEADDGSRVVAEGVGGAAVVSGGAEE 122
Query: 93 -----VLLSGMSGSWVVAGLGRALGREVAVLTSLGVGASVSKTAAVVGGEG--ASGVVAR 145
V+ G+ G+ VV+G G V +G A VS A GG G A GV
Sbjct: 123 DGGAGVVAGGVGGAAVVSGGAEEDGGACVVAEGVGGAAVVSGGAEEDGGAGVVAEGVGGA 182
Query: 146 AVATVVSGR--GRSLRTPVVLITAVVAVKGGAAGVLGVAVATVAGTVATVGSPVLVAAVV 203
AV + +G G ++ T +++T L V G T G V++
Sbjct: 183 AVVSCGAGEFTGANVATEELVLTF----------SLEDMVVAFWGRKVTFGRVVILVEAD 232
Query: 204 AMVVETVVALWLGSSGTSVTTRGLVAG 230
V + +W+ ++ +TT ++G
Sbjct: 233 GKVTD---GIWVVATKVGLTTLLFLSG 256
Score = 31.2 bits (69), Expect = 1.1
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 13/93 (13%)
Query: 109 RALGREVAVLTSLGVGASVSKTAAVVGGEGASGVVARAV--ATVVSGRGRS---LRTPVV 163
R +G E+ V+ +GA+V A G +G +GVVA V A VVSG + R
Sbjct: 55 RVVGEELGVV----IGAAVVSCGA--GEDGGAGVVAEGVGGAAVVSGGAEADDGSRVVAE 108
Query: 164 LITAVVAVKGGAA--GVLGVAVATVAGTVATVG 194
+ V GGA G GV V G G
Sbjct: 109 GVGGAAVVSGGAEEDGGAGVVAGGVGGAAVVSG 141
>gi|169166533 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 35.0 bits (79), Expect = 0.077
Identities = 50/207 (24%), Positives = 78/207 (37%), Gaps = 24/207 (11%)
Query: 35 LAVSGCVVSSSGSSKSPLGPPLTGTSGSSRIVVRKVSGVGVCREATSVGPGAVVPRGR-- 92
+ + VVS G G G++ + + G A VG AVV G
Sbjct: 63 VVIGAAVVSCGAGEDGGAGVVAEGVGGAAVVSGGAEADDGSRVVAEGVGGAAVVSGGAEE 122
Query: 93 -----VLLSGMSGSWVVAGLGRALGREVAVLTSLGVGASVSKTAAVVGGEG--ASGVVAR 145
V+ G+ G+ VV+G G V +G A VS A GG G A GV
Sbjct: 123 DGGAGVVAGGVGGAAVVSGGAEEDGGACVVAEGVGGAAVVSGGAEEDGGAGVVAEGVGGA 182
Query: 146 AVATVVSGR--GRSLRTPVVLITAVVAVKGGAAGVLGVAVATVAGTVATVGSPVLVAAVV 203
AV + +G G ++ T +++T L V G T G V++
Sbjct: 183 AVVSCGAGEFTGANVATEELVLTF----------SLEDMVVAFWGRKVTFGRVVILVEAD 232
Query: 204 AMVVETVVALWLGSSGTSVTTRGLVAG 230
V + +W+ ++ +TT ++G
Sbjct: 233 GKVTD---GIWVVATKVGLTTLLFLSG 256
Score = 31.2 bits (69), Expect = 1.1
Identities = 31/93 (33%), Positives = 40/93 (43%), Gaps = 13/93 (13%)
Query: 109 RALGREVAVLTSLGVGASVSKTAAVVGGEGASGVVARAV--ATVVSGRGRS---LRTPVV 163
R +G E+ V+ +GA+V A G +G +GVVA V A VVSG + R
Sbjct: 55 RVVGEELGVV----IGAAVVSCGA--GEDGGAGVVAEGVGGAAVVSGGAEADDGSRVVAE 108
Query: 164 LITAVVAVKGGAA--GVLGVAVATVAGTVATVG 194
+ V GGA G GV V G G
Sbjct: 109 GVGGAAVVSGGAEEDGGAGVVAGGVGGAAVVSG 141
>gi|239755776 PREDICTED: similar to Mucin-19 [Homo sapiens]
Length = 1950
Score = 34.7 bits (78), Expect = 0.10
Identities = 66/279 (23%), Positives = 90/279 (32%), Gaps = 45/279 (16%)
Query: 9 PGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSS-------------------- 48
PG A G+ G ++A TA+ + + S SG++
Sbjct: 1629 PGEAGPGATVSGSTGVSAGSITASPGASATSSESSKSGTTGPSVGGKTGATSSEATSSEG 1688
Query: 49 -KSPLGPPLTGTSGSSRIVVRKVSGVGVCREATSVGP---------GAVVPRGRVLLSGM 98
G L T+GS + K S G P G G V +G
Sbjct: 1689 MSGVTGQSLGSTAGSDSEITAKTSFTGSSPPGKLTRPSPGSPGHFSGGTTEWGNVATTGA 1748
Query: 99 SGSWVVAGLGRALGREVAVLTSLGVGASVSKTAAVVGGEGASGVVARAVAT--VVSGRGR 156
+G LG G V TS G G + + G G + V V + G
Sbjct: 1749 AGENTSGALGSTEG-SVEATTSAGSGNTAGTSGTGDTGPGNTAVSGTPVVSPGATPGAPG 1807
Query: 157 SLRTPVVLITAVVAVKGGAAG-----VLGVAVATVAGTV---ATVGSPVLVAAVVAMVVE 208
S I K G +G VL A TV +T SPV A
Sbjct: 1808 SSTPGEADIGNTSFGKSGKSGHDSLTVLNPAFLRRTPTVSAASTTSSPVSKHTDAASA-- 1865
Query: 209 TVVALWLGSSGTSVTTRGLVAGSRVGRSEGSSSNGVPTG 247
T V + GT T G +G ++ + G SS+G TG
Sbjct: 1866 TAVTISGSKPGTPGTPGGATSGGKI--TSGWSSSGTSTG 1902
Score = 30.4 bits (67), Expect = 1.9
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 18/183 (9%)
Query: 24 LAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLT--------------GTSGSSRIVVRK 69
+ P TA + A++ ++G++ PL P T G +G + +V
Sbjct: 1522 VTGGPSTAASIPAITTSSSETTGTTLGPLTEPFTTGITETSVPIISTSGNAGMTGVVSPT 1581
Query: 70 VSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTSLGVGASVSK 129
V+G T A S +G+ V+G A+G + G GA+VS
Sbjct: 1582 VTGASGMAGTTGGVDAATTGAASENTSERAGTPRVSGATPAVGGG-STPGEAGPGATVSG 1640
Query: 130 TAAVVGGE--GASGVVARAVATVVSG-RGRSLRTPVVLITAVVAVKGGAAGVLGVAVATV 186
+ V G + G A + + SG G S+ ++ G +GV G ++ +
Sbjct: 1641 STGVSAGSITASPGASATSSESSKSGTTGPSVGGKTGATSSEATSSEGMSGVTGQSLGST 1700
Query: 187 AGT 189
AG+
Sbjct: 1701 AGS 1703
>gi|239750277 PREDICTED: hypothetical protein XP_002347351 [Homo
sapiens]
Length = 2134
Score = 34.7 bits (78), Expect = 0.10
Identities = 66/279 (23%), Positives = 90/279 (32%), Gaps = 45/279 (16%)
Query: 9 PGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSS-------------------- 48
PG A G+ G ++A TA+ + + S SG++
Sbjct: 1813 PGEAGPGATVSGSTGVSAGSITASPGASATSSESSKSGTTGPSVGGKTGATSSEATSSEG 1872
Query: 49 -KSPLGPPLTGTSGSSRIVVRKVSGVGVCREATSVGP---------GAVVPRGRVLLSGM 98
G L T+GS + K S G P G G V +G
Sbjct: 1873 MSGVTGQSLGSTAGSDSEITAKTSFTGSSPPGKLTRPSPGSPGHFSGGTTEWGNVATTGA 1932
Query: 99 SGSWVVAGLGRALGREVAVLTSLGVGASVSKTAAVVGGEGASGVVARAVAT--VVSGRGR 156
+G LG G V TS G G + + G G + V V + G
Sbjct: 1933 AGENTSGALGSTEG-SVEATTSAGSGNTAGTSGTGDTGPGNTAVSGTPVVSPGATPGAPG 1991
Query: 157 SLRTPVVLITAVVAVKGGAAG-----VLGVAVATVAGTV---ATVGSPVLVAAVVAMVVE 208
S I K G +G VL A TV +T SPV A
Sbjct: 1992 SSTPGEADIGNTSFGKSGKSGHDSLTVLNPAFLRRTPTVSAASTTSSPVSKHTDAASA-- 2049
Query: 209 TVVALWLGSSGTSVTTRGLVAGSRVGRSEGSSSNGVPTG 247
T V + GT T G +G ++ + G SS+G TG
Sbjct: 2050 TAVTISGSKPGTPGTPGGATSGGKI--TSGWSSSGTSTG 2086
Score = 30.4 bits (67), Expect = 1.9
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 18/183 (9%)
Query: 24 LAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLT--------------GTSGSSRIVVRK 69
+ P TA + A++ ++G++ PL P T G +G + +V
Sbjct: 1706 VTGGPSTAASIPAITTSSSETTGTTLGPLTEPFTTGITETSVPIISTSGNAGMTGVVSPT 1765
Query: 70 VSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTSLGVGASVSK 129
V+G T A S +G+ V+G A+G + G GA+VS
Sbjct: 1766 VTGASGMAGTTGGVDAATTGAASENTSERAGTPRVSGATPAVGGG-STPGEAGPGATVSG 1824
Query: 130 TAAVVGGE--GASGVVARAVATVVSG-RGRSLRTPVVLITAVVAVKGGAAGVLGVAVATV 186
+ V G + G A + + SG G S+ ++ G +GV G ++ +
Sbjct: 1825 STGVSAGSITASPGASATSSESSKSGTTGPSVGGKTGATSSEATSSEGMSGVTGQSLGST 1884
Query: 187 AGT 189
AG+
Sbjct: 1885 AGS 1887
>gi|239744587 PREDICTED: hypothetical protein XP_002343203 [Homo
sapiens]
Length = 2134
Score = 34.7 bits (78), Expect = 0.10
Identities = 66/279 (23%), Positives = 90/279 (32%), Gaps = 45/279 (16%)
Query: 9 PGRAPLGSVPGGDDALAAAPPTATTSLAVSGCVVSSSGSS-------------------- 48
PG A G+ G ++A TA+ + + S SG++
Sbjct: 1813 PGEAGPGATVSGSTGVSAGSITASPGASATSSESSKSGTTGPSVGGKTGATSSEATSSEG 1872
Query: 49 -KSPLGPPLTGTSGSSRIVVRKVSGVGVCREATSVGP---------GAVVPRGRVLLSGM 98
G L T+GS + K S G P G G V +G
Sbjct: 1873 MSGVTGQSLGSTAGSDSEITAKTSFTGSSPPGKLTRPSPGSPGHFSGGTTEWGNVATTGA 1932
Query: 99 SGSWVVAGLGRALGREVAVLTSLGVGASVSKTAAVVGGEGASGVVARAVAT--VVSGRGR 156
+G LG G V TS G G + + G G + V V + G
Sbjct: 1933 AGENTSGALGSTEG-SVEATTSAGSGNTAGTSGTGDTGPGNTAVSGTPVVSPGATPGAPG 1991
Query: 157 SLRTPVVLITAVVAVKGGAAG-----VLGVAVATVAGTV---ATVGSPVLVAAVVAMVVE 208
S I K G +G VL A TV +T SPV A
Sbjct: 1992 SSTPGEADIGNTSFGKSGKSGHDSLTVLNPAFLRRTPTVSAASTTSSPVSKHTDAASA-- 2049
Query: 209 TVVALWLGSSGTSVTTRGLVAGSRVGRSEGSSSNGVPTG 247
T V + GT T G +G ++ + G SS+G TG
Sbjct: 2050 TAVTISGSKPGTPGTPGGATSGGKI--TSGWSSSGTSTG 2086
Score = 29.6 bits (65), Expect = 3.2
Identities = 41/183 (22%), Positives = 71/183 (38%), Gaps = 18/183 (9%)
Query: 24 LAAAPPTATTSLAVSGCVVSSSGSSKSPLGPPLT--------------GTSGSSRIVVRK 69
+ P TA + A++ ++G++ PL P T G +G + +V
Sbjct: 1706 VTGGPSTAASIPAITTSSSETTGTTLGPLTEPFTTGITETSVPIISTSGNAGMTGVVSPT 1765
Query: 70 VSGVGVCREATSVGPGAVVPRGRVLLSGMSGSWVVAGLGRALGREVAVLTSLGVGASVSK 129
V+G T A S +G+ V+G A+G + G GA+VS
Sbjct: 1766 VTGASGMAGTTGGVDAATTGAASENTSERAGTPRVSGETPAVGGG-STPGEAGPGATVSG 1824
Query: 130 TAAVVGGE--GASGVVARAVATVVSG-RGRSLRTPVVLITAVVAVKGGAAGVLGVAVATV 186
+ V G + G A + + SG G S+ ++ G +GV G ++ +
Sbjct: 1825 STGVSAGSITASPGASATSSESSKSGTTGPSVGGKTGATSSEATSSEGMSGVTGQSLGST 1884
Query: 187 AGT 189
AG+
Sbjct: 1885 AGS 1887
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.128 0.361
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,257,858
Number of Sequences: 37866
Number of extensions: 529852
Number of successful extensions: 2342
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 118
Number of HSP's that attempted gapping in prelim test: 2165
Number of HSP's gapped (non-prelim): 281
length of query: 290
length of database: 18,247,518
effective HSP length: 101
effective length of query: 189
effective length of database: 14,423,052
effective search space: 2725956828
effective search space used: 2725956828
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.