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Search of human proteins with 239747190
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239747190 PREDICTED: hypothetical protein [Homo sapiens]
(263 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239747190 PREDICTED: hypothetical protein [Homo sapiens] 572 e-164
gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3 [... 35 0.051
gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1 [... 35 0.051
gi|41281981 toll-like receptor adaptor molecule 1 [Homo sapiens] 35 0.051
gi|18105007 carbamoylphosphate synthetase 2/aspartate transcarba... 34 0.11
gi|40806209 WW domain containing E3 ubiquitin protein ligase 2 i... 34 0.15
gi|40806207 WW domain containing E3 ubiquitin protein ligase 2 i... 34 0.15
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap... 33 0.33
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 33 0.33
gi|239754512 PREDICTED: hypothetical protein [Homo sapiens] 32 0.43
gi|239749073 PREDICTED: hypothetical protein [Homo sapiens] 32 0.43
gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo ... 32 0.43
gi|239508751 PREDICTED: hypothetical protein [Homo sapiens] 32 0.43
gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [... 32 0.57
gi|148276998 zinc finger protein 628 [Homo sapiens] 32 0.57
gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo... 32 0.74
gi|169172306 PREDICTED: hypothetical protein LOC441239 [Homo sap... 32 0.74
gi|169170482 PREDICTED: hypothetical protein LOC441239 [Homo sap... 32 0.74
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 32 0.74
gi|169179021 PREDICTED: hypothetical protein [Homo sapiens] 31 0.96
gi|169181246 PREDICTED: hypothetical protein [Homo sapiens] 31 0.96
gi|38787970 tensin like C1 domain containing phosphatase isoform... 31 0.96
gi|38787957 tensin like C1 domain containing phosphatase isoform... 31 0.96
gi|38787941 tensin like C1 domain containing phosphatase isoform... 31 0.96
gi|50428940 mediator complex subunit 25 [Homo sapiens] 31 0.96
gi|149363674 hypothetical protein LOC25758 [Homo sapiens] 31 0.96
gi|124107614 PR domain containing 13 [Homo sapiens] 31 0.96
gi|239753692 PREDICTED: hypothetical protein XP_002345754 [Homo ... 31 1.3
gi|33356556 amelogenin (X chromosome) isoform 3 precursor [Homo ... 31 1.3
gi|33356558 amelogenin (X chromosome) isoform 2 precursor [Homo ... 31 1.3
>gi|239747190 PREDICTED: hypothetical protein [Homo sapiens]
Length = 263
Score = 572 bits (1475), Expect = e-164
Identities = 263/263 (100%), Positives = 263/263 (100%)
Query: 1 MEPPFTRLEGRMSRRAAPFGASQDGAGWVQLVKRNAAPQPLQTKPNSPARGWITGHPAAA 60
MEPPFTRLEGRMSRRAAPFGASQDGAGWVQLVKRNAAPQPLQTKPNSPARGWITGHPAAA
Sbjct: 1 MEPPFTRLEGRMSRRAAPFGASQDGAGWVQLVKRNAAPQPLQTKPNSPARGWITGHPAAA 60
Query: 61 FPPEEPRRLPRPEMPPVWLCLSPVPRQLGGSIPKQMHPAHDGTPGTPILRTLQSFKLELA 120
FPPEEPRRLPRPEMPPVWLCLSPVPRQLGGSIPKQMHPAHDGTPGTPILRTLQSFKLELA
Sbjct: 61 FPPEEPRRLPRPEMPPVWLCLSPVPRQLGGSIPKQMHPAHDGTPGTPILRTLQSFKLELA 120
Query: 121 GFCLYRHRLQSLRCCLAGKCRAGGAGPQLEAPRCSPPLHCRAQGGQEQPQQQQKPNWERN 180
GFCLYRHRLQSLRCCLAGKCRAGGAGPQLEAPRCSPPLHCRAQGGQEQPQQQQKPNWERN
Sbjct: 121 GFCLYRHRLQSLRCCLAGKCRAGGAGPQLEAPRCSPPLHCRAQGGQEQPQQQQKPNWERN 180
Query: 181 RGKNPHRLLGTYKEMPTSILLTWHLLTWHLLGCHKTDKSFHVRLDTCQGGVSKLGHRQHP 240
RGKNPHRLLGTYKEMPTSILLTWHLLTWHLLGCHKTDKSFHVRLDTCQGGVSKLGHRQHP
Sbjct: 181 RGKNPHRLLGTYKEMPTSILLTWHLLTWHLLGCHKTDKSFHVRLDTCQGGVSKLGHRQHP 240
Query: 241 RPGHWVEETVLGRSRREGPGLFP 263
RPGHWVEETVLGRSRREGPGLFP
Sbjct: 241 RPGHWVEETVLGRSRREGPGLFP 263
>gi|148596988 mucoepidermoid carcinoma translocated 1 isoform 3
[Homo sapiens]
Length = 650
Score = 35.4 bits (80), Expect = 0.051
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 26 AGWVQLVKRNAAPQPLQTKPNSPARGWITGHPAAAFPPEEPRRLPR--PEMPPVWLCLSP 83
A + Q + PQP P PA + P PP+ P RLP P +P L P
Sbjct: 369 AFFTQAGSQQPPPQPQPPPPPPPA----SQQPPPPPPPQAPVRLPPGGPLLPSASLTRGP 424
Query: 84 VPRQLGGSIPKQMHPAHDGTPGTP 107
P L ++P + + PG P
Sbjct: 425 QPPPLAVTVPSSLPQSPPENPGQP 448
>gi|148596965 mucoepidermoid carcinoma translocated 1 isoform 1
[Homo sapiens]
Length = 634
Score = 35.4 bits (80), Expect = 0.051
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 26 AGWVQLVKRNAAPQPLQTKPNSPARGWITGHPAAAFPPEEPRRLPR--PEMPPVWLCLSP 83
A + Q + PQP P PA + P PP+ P RLP P +P L P
Sbjct: 353 AFFTQAGSQQPPPQPQPPPPPPPA----SQQPPPPPPPQAPVRLPPGGPLLPSASLTRGP 408
Query: 84 VPRQLGGSIPKQMHPAHDGTPGTP 107
P L ++P + + PG P
Sbjct: 409 QPPPLAVTVPSSLPQSPPENPGQP 432
>gi|41281981 toll-like receptor adaptor molecule 1 [Homo sapiens]
Length = 712
Score = 35.4 bits (80), Expect = 0.051
Identities = 30/89 (33%), Positives = 35/89 (39%), Gaps = 11/89 (12%)
Query: 17 APFGASQDGAGWVQLVKRNAAPQPLQTKPN----SPARGWITGHPAAAFPPEE--PRRLP 70
AP+GA G V L AP P T P P W G P P P+ LP
Sbjct: 601 APYGARMPFGGQVPL----GAPPPFPTWPGCPQPPPLHAWQAGTPPPPSPQPAAFPQSLP 656
Query: 71 RPEMPPVWLCLSPVPRQLGGSIPKQMHPA 99
P+ P + SP P Q G P +H A
Sbjct: 657 FPQ-SPAFPTASPAPPQSPGLQPLIIHHA 684
>gi|18105007 carbamoylphosphate synthetase 2/aspartate
transcarbamylase/dihydroorotase [Homo sapiens]
Length = 2225
Score = 34.3 bits (77), Expect = 0.11
Identities = 38/127 (29%), Positives = 48/127 (37%), Gaps = 39/127 (30%)
Query: 18 PFGASQDGAGWVQ-----LVKRNAAPQPLQTKPNSPARGWITGHPAAAF----------- 61
P G QD W Q L A + T P P RG I G P F
Sbjct: 1802 PPGYGQDVRKWPQGAVPQLPPSAPATSEMTTTPERPRRG-IPGLPDGRFHLPPRIHRASD 1860
Query: 62 ---PPEEP-----RRLPRPEM--PPVWLCLSPVPRQLGGSIPKQMHPAHDGTPG------ 105
P EEP R++ PE+ P C P P +P+Q P + GTPG
Sbjct: 1861 PGLPAEEPKEKSSRKVAEPELMGTPDGTCYPPPP------VPRQASPQNLGTPGLLHPQT 1914
Query: 106 TPILRTL 112
+P+L +L
Sbjct: 1915 SPLLHSL 1921
>gi|40806209 WW domain containing E3 ubiquitin protein ligase 2
isoform 3 [Homo sapiens]
Length = 335
Score = 33.9 bits (76), Expect = 0.15
Identities = 32/109 (29%), Positives = 42/109 (38%), Gaps = 6/109 (5%)
Query: 2 EPPFTRLEGRMSRRAAPFGASQ---DGAGWVQLVKRNAAPQPLQTKPNSP-ARGWITGHP 57
+PP T G SR GAS G R+ QP++ +S A G + P
Sbjct: 180 QPPSTNCFGGRSRTHRHSGASARTTPATGEQSPGARSRHRQPVKNSGHSGLANGTVNDEP 239
Query: 58 AAAFPPEEPRRLPRPEMPPVWLCLSPVPRQLGGSIPKQMHPAHDGTPGT 106
A PEEP + P L ++P P S+P PA P T
Sbjct: 240 TTATDPEEPSVVGVTSPPAAPLSVTPNPNTT--SLPAPATPAEGEEPST 286
>gi|40806207 WW domain containing E3 ubiquitin protein ligase 2
isoform 1 [Homo sapiens]
Length = 870
Score = 33.9 bits (76), Expect = 0.15
Identities = 32/109 (29%), Positives = 42/109 (38%), Gaps = 6/109 (5%)
Query: 2 EPPFTRLEGRMSRRAAPFGASQ---DGAGWVQLVKRNAAPQPLQTKPNSP-ARGWITGHP 57
+PP T G SR GAS G R+ QP++ +S A G + P
Sbjct: 180 QPPSTNCFGGRSRTHRHSGASARTTPATGEQSPGARSRHRQPVKNSGHSGLANGTVNDEP 239
Query: 58 AAAFPPEEPRRLPRPEMPPVWLCLSPVPRQLGGSIPKQMHPAHDGTPGT 106
A PEEP + P L ++P P S+P PA P T
Sbjct: 240 TTATDPEEPSVVGVTSPPAAPLSVTPNPNTT--SLPAPATPAEGEEPST 286
>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo
sapiens]
Length = 1747
Score = 32.7 bits (73), Expect = 0.33
Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 11/109 (10%)
Query: 8 LEGRMSRRAAPFGASQDGAGWVQLV---KRNAAPQPLQTKPNSPARGWITGHPAAAFPPE 64
LE R+ AA G + GA L ++ A + + ++P G P AA PPE
Sbjct: 875 LEARLGAGAA--GLYEPGAALGPLPYPERQKRARSMIILQDSAPESGDAPRPPPAATPPE 932
Query: 65 EPRRLPRPEMPPVWLCLSPVPRQLGGSIPKQMHPAHDGTPGTPILRTLQ 113
P+R PRP P SP LG P+ +P+++ LQ
Sbjct: 933 RPKRRPRPPGPD-----SPY-ANLGAFSASLFAPSKPQRRKSPLVKQLQ 975
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 32.7 bits (73), Expect = 0.33
Identities = 25/84 (29%), Positives = 34/84 (40%), Gaps = 15/84 (17%)
Query: 28 WVQLVKRNAAPQPLQTKPNSPARGWITGHPAAAFPPEEPRRL------PRPEMPPV---- 77
W Q + +A P P+ P P + PA PP P+ L P MPP+
Sbjct: 664 WQQHQQGSAPPTPVPPSPPQPVT--LGAVPAPQAPPPPPKALYPGALGRPPPMPPMNFDP 721
Query: 78 -WLCLSPV--PRQLGGSIPKQMHP 98
W+ + P PR L G P +P
Sbjct: 722 RWMMIPPYVDPRLLQGRPPLDFYP 745
Score = 29.6 bits (65), Expect = 2.8
Identities = 27/83 (32%), Positives = 34/83 (40%), Gaps = 8/83 (9%)
Query: 33 KRNAAPQPLQTKPNSPARGWITGHPAAAFPPEEPRRLPRPEMPPVWLCLSPVPRQLGGSI 92
K A + L+ +P +P T P PP P+ LP P PP +P P +
Sbjct: 496 KFGAPDKRLKAEPAAPPAAPSTPAP----PPAVPKELPAPPAPPP--ASAPTP-ETEPEE 548
Query: 93 PKQMHPAHD-GTPGTPILRTLQS 114
P Q PA TPG TL S
Sbjct: 549 PAQAPPAQSTPTPGVAAAPTLVS 571
>gi|239754512 PREDICTED: hypothetical protein [Homo sapiens]
Length = 556
Score = 32.3 bits (72), Expect = 0.43
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
Query: 33 KRNAAPQPLQTKPNSPARGW-ITGHPAAAFPPEEPRRLPRPEMPPVWLCLSPVPRQLGGS 91
+R+ AP+ Q KP P + W G A P R LPRP PP P+P
Sbjct: 412 ERHEAPE--QGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPPPPP----PPLPP----- 460
Query: 92 IPKQMHPAHDGTPG 105
P + P H PG
Sbjct: 461 -PPRREPCHRAWPG 473
>gi|239749073 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 32.3 bits (72), Expect = 0.43
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
Query: 33 KRNAAPQPLQTKPNSPARGW-ITGHPAAAFPPEEPRRLPRPEMPPVWLCLSPVPRQLGGS 91
+R+ AP+ Q KP P + W G A P R LPRP PP P+P
Sbjct: 740 ERHEAPE--QGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPPPPP----PPLPP----- 788
Query: 92 IPKQMHPAHDGTPG 105
P + P H PG
Sbjct: 789 -PPRREPCHRAWPG 801
>gi|239743099 PREDICTED: hypothetical protein XP_002342754 [Homo
sapiens]
Length = 884
Score = 32.3 bits (72), Expect = 0.43
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
Query: 33 KRNAAPQPLQTKPNSPARGW-ITGHPAAAFPPEEPRRLPRPEMPPVWLCLSPVPRQLGGS 91
+R+ AP+ Q KP P + W G A P R LPRP PP P+P
Sbjct: 740 ERHEAPE--QGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPPPPP----PPLPP----- 788
Query: 92 IPKQMHPAHDGTPG 105
P + P H PG
Sbjct: 789 -PPRREPCHRAWPG 801
>gi|239508751 PREDICTED: hypothetical protein [Homo sapiens]
Length = 884
Score = 32.3 bits (72), Expect = 0.43
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 13/74 (17%)
Query: 33 KRNAAPQPLQTKPNSPARGW-ITGHPAAAFPPEEPRRLPRPEMPPVWLCLSPVPRQLGGS 91
+R+ AP+ Q KP P + W G A P R LPRP PP P+P
Sbjct: 740 ERHEAPE--QGKPRLPPQAWHDQGRDAPPGPTPARRGLPRPPPPPP----PPLPP----- 788
Query: 92 IPKQMHPAHDGTPG 105
P + P H PG
Sbjct: 789 -PPRREPCHRAWPG 801
>gi|111118994 brain-specific angiogenesis inhibitor 1 precursor [Homo
sapiens]
Length = 1584
Score = 32.0 bits (71), Expect = 0.57
Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 9/71 (12%)
Query: 41 LQTKPNS--PARGWITGHPAAAFPPEEPRRLPRPEMPPVWLCLSPVPRQLGGSIPKQMHP 98
L T P + PAR + P + PPE P P P PP P P Q P + P
Sbjct: 1380 LSTAPEASLPARSPPSRQPPSGGPPEAPPAQPPPPPPP-----PPPPPQQPLPPPPNLEP 1434
Query: 99 AHD--GTPGTP 107
A G PG P
Sbjct: 1435 APPSLGDPGEP 1445
Score = 30.4 bits (67), Expect = 1.6
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 5/82 (6%)
Query: 30 QLVKRNAAPQPLQTKPNSPARGWITGHPAAAFPPEEPRRLPRPEMPPVWLC-----LSPV 84
+L+ + AP+ + P+R +G P A P + P P P PP L P
Sbjct: 1376 RLIHLSTAPEASLPARSPPSRQPPSGGPPEAPPAQPPPPPPPPPPPPQQPLPPPPNLEPA 1435
Query: 85 PRQLGGSIPKQMHPAHDGTPGT 106
P LG HP P T
Sbjct: 1436 PPSLGDPGEPAAHPGPSTGPST 1457
>gi|148276998 zinc finger protein 628 [Homo sapiens]
Length = 1055
Score = 32.0 bits (71), Expect = 0.57
Identities = 36/124 (29%), Positives = 50/124 (40%), Gaps = 25/124 (20%)
Query: 55 GHPAAAFPPEEPRRLPRPEMPPVWLCLSPVPRQLGGSIPKQMHPAHDGTPGTPILRTLQS 114
G AA P E P P+ + PP SP +P+ PA PG L +S
Sbjct: 314 GPDAAPQPQEAPAEAPKADQPP-----SP--------LPQPPPPAAAPAPGFACLPCGKS 360
Query: 115 FKLELAGFCLYRHRL-----QSLRCCLAGKCRAGGAGPQLEAPRCSPPLHC-RAQGGQEQ 168
F+ +AG ++H Q+ RC G C G+ PQL + H A G+
Sbjct: 361 FR-TVAGLSRHQHSHGAAGGQAFRC---GSC--DGSFPQLASLLAHQQCHVEEAAAGRPP 414
Query: 169 PQQQ 172
PQ +
Sbjct: 415 PQAE 418
>gi|53692189 adipocyte enhancer binding protein 1 precursor [Homo
sapiens]
Length = 1158
Score = 31.6 bits (70), Expect = 0.74
Identities = 20/63 (31%), Positives = 27/63 (42%), Gaps = 10/63 (15%)
Query: 30 QLVKRNAAPQPLQTKPNSPARGWITGHPAAAFPPEEPRRLPRPE---MPPVWLCLSPVPR 86
+ ++R P+P ++ P R W PPEE P PE PPV L P+P
Sbjct: 248 EYIRRQKQPRPPPSRRRRPERVW-------PEPPEEKAPAPAPEERIEPPVKPLLPPLPP 300
Query: 87 QLG 89
G
Sbjct: 301 DYG 303
>gi|169172306 PREDICTED: hypothetical protein LOC441239 [Homo
sapiens]
Length = 505
Score = 31.6 bits (70), Expect = 0.74
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 2 EPPFTRLEGRMSRRAAPFGASQDGAGWVQLVKRNAAPQPLQTKPNSPARGWITGHPAAAF 61
+ P R G M AP ++ W+Q++ + +P+ T P +P + W+ G+P A
Sbjct: 277 QQPGFREWGEMRAPGAP--QVEEAQVWMQVLDSHKGEEPV-THPTTPLK-WVKGNPGAGH 332
Query: 62 PPEEPR-RLPRP 72
P ++ R + P P
Sbjct: 333 PAQKKRSKSPTP 344
>gi|169170482 PREDICTED: hypothetical protein LOC441239 [Homo
sapiens]
Length = 542
Score = 31.6 bits (70), Expect = 0.74
Identities = 20/72 (27%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 2 EPPFTRLEGRMSRRAAPFGASQDGAGWVQLVKRNAAPQPLQTKPNSPARGWITGHPAAAF 61
+ P R G M AP ++ W+Q++ + +P+ T P +P + W+ G+P A
Sbjct: 277 QQPGFREWGEMRAPGAP--QVEEAQVWMQVLDSHKGEEPV-THPTTPLK-WVKGNPGAGH 332
Query: 62 PPEEPR-RLPRP 72
P ++ R + P P
Sbjct: 333 PAQKKRSKSPTP 344
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 31.6 bits (70), Expect = 0.74
Identities = 30/99 (30%), Positives = 34/99 (34%), Gaps = 15/99 (15%)
Query: 11 RMSRRAAPFGASQDGAGWVQLVKRNAAPQPLQTKPNSPARGWITGHPAAAFPPEEPRRLP 70
R R AA + G Q R PL P +PA P A PP PRR P
Sbjct: 147 RAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAPPPAPAA------PPAVAPPAGPRRAP 200
Query: 71 -------RPEMPPVWLCLSPVPRQLGGSIPKQMHPAHDG 102
P +PP P P Q P Q P +G
Sbjct: 201 PPAVAAREPPLPPP--PQPPAPPQQQQPPPPQPQPPPEG 237
>gi|169179021 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 31.2 bits (69), Expect = 0.96
Identities = 32/107 (29%), Positives = 41/107 (38%), Gaps = 5/107 (4%)
Query: 5 FTRLEGRMSRRAAPFGASQDGAGWVQLVKRNAAPQPLQTKPNSPARGWITGH--PAAAFP 62
F L +R AP A +G + +R+ +P + P W+ G PAA
Sbjct: 21 FLNLTAEQARSQAPGFALLEGGP--RRRRRSGSPALPLSAPCGSRGPWLPGSLAPAARAN 78
Query: 63 PEEPRRL-PRPEMPPVWLCLSPVPRQLGGSIPKQMHPAHDGTPGTPI 108
PE R RPE+P P PR L Q AH G G I
Sbjct: 79 PERTRASRSRPEVPARHYQTRPQPRILADPTGPQEGAAHWGPHGLAI 125
>gi|169181246 PREDICTED: hypothetical protein [Homo sapiens]
Length = 176
Score = 31.2 bits (69), Expect = 0.96
Identities = 32/107 (29%), Positives = 41/107 (38%), Gaps = 5/107 (4%)
Query: 5 FTRLEGRMSRRAAPFGASQDGAGWVQLVKRNAAPQPLQTKPNSPARGWITGH--PAAAFP 62
F L +R AP A +G + +R+ +P + P W+ G PAA
Sbjct: 21 FLNLTAEQARSQAPGFALLEGGP--RRRRRSGSPALPLSAPCGSRGPWLPGSLAPAARAN 78
Query: 63 PEEPRRL-PRPEMPPVWLCLSPVPRQLGGSIPKQMHPAHDGTPGTPI 108
PE R RPE+P P PR L Q AH G G I
Sbjct: 79 PERTRASRSRPEVPARHYQTRPQPRILADPTGPQEGAAHWGPHGLAI 125
>gi|38787970 tensin like C1 domain containing phosphatase isoform 3
[Homo sapiens]
Length = 1285
Score = 31.2 bits (69), Expect = 0.96
Identities = 31/108 (28%), Positives = 40/108 (37%), Gaps = 21/108 (19%)
Query: 11 RMSRRAAPFGASQDGAGWVQLVKRNAAPQPLQTKPNSPARGWITGHPAAAFPPEEPRRLP 70
R+S A SQ G G + + P+PL P SP FPP P P
Sbjct: 815 RLSPGEALPPVSQAGTGKAPELPSGSGPEPLAPSPVSP-----------TFPPSSPSDWP 863
Query: 71 RPEMP----PVWLCLSPVPRQLGG------SIPKQMHPAHDGTPGTPI 108
+ P SPVP L G P+ + DG+P TP+
Sbjct: 864 QERSPGGHSDGASPRSPVPTTLPGLRHAPWQGPRGPPDSPDGSPLTPV 911
>gi|38787957 tensin like C1 domain containing phosphatase isoform 2
[Homo sapiens]
Length = 1409
Score = 31.2 bits (69), Expect = 0.96
Identities = 31/108 (28%), Positives = 40/108 (37%), Gaps = 21/108 (19%)
Query: 11 RMSRRAAPFGASQDGAGWVQLVKRNAAPQPLQTKPNSPARGWITGHPAAAFPPEEPRRLP 70
R+S A SQ G G + + P+PL P SP FPP P P
Sbjct: 939 RLSPGEALPPVSQAGTGKAPELPSGSGPEPLAPSPVSP-----------TFPPSSPSDWP 987
Query: 71 RPEMP----PVWLCLSPVPRQLGG------SIPKQMHPAHDGTPGTPI 108
+ P SPVP L G P+ + DG+P TP+
Sbjct: 988 QERSPGGHSDGASPRSPVPTTLPGLRHAPWQGPRGPPDSPDGSPLTPV 1035
>gi|38787941 tensin like C1 domain containing phosphatase isoform 1
[Homo sapiens]
Length = 1419
Score = 31.2 bits (69), Expect = 0.96
Identities = 31/108 (28%), Positives = 40/108 (37%), Gaps = 21/108 (19%)
Query: 11 RMSRRAAPFGASQDGAGWVQLVKRNAAPQPLQTKPNSPARGWITGHPAAAFPPEEPRRLP 70
R+S A SQ G G + + P+PL P SP FPP P P
Sbjct: 949 RLSPGEALPPVSQAGTGKAPELPSGSGPEPLAPSPVSP-----------TFPPSSPSDWP 997
Query: 71 RPEMP----PVWLCLSPVPRQLGG------SIPKQMHPAHDGTPGTPI 108
+ P SPVP L G P+ + DG+P TP+
Sbjct: 998 QERSPGGHSDGASPRSPVPTTLPGLRHAPWQGPRGPPDSPDGSPLTPV 1045
>gi|50428940 mediator complex subunit 25 [Homo sapiens]
Length = 747
Score = 31.2 bits (69), Expect = 0.96
Identities = 28/77 (36%), Positives = 31/77 (40%), Gaps = 8/77 (10%)
Query: 38 PQPLQTKPNSPARGWITGHPAAAFPPEEPRRLPRPEMPPV-----WLCLSPVPRQLGGSI 92
PQP T P G G P AA P P + RP+ P L L+P P Q G
Sbjct: 605 PQPQGTA--QPPPGAPQGPPGAASGPPPPGPILRPQNPGANPQLRSLLLNPPPPQTGVP- 661
Query: 93 PKQMHPAHDGTPGTPIL 109
P Q H PG P L
Sbjct: 662 PPQASLHHLQPPGAPAL 678
>gi|149363674 hypothetical protein LOC25758 [Homo sapiens]
Length = 1855
Score = 31.2 bits (69), Expect = 0.96
Identities = 16/56 (28%), Positives = 23/56 (41%), Gaps = 2/56 (3%)
Query: 21 ASQDGAGWVQLVKRNAAPQPLQTKPNSPARGWITGHPAAAFPPEEPRRLPRPEMPP 76
+S W+ N P Q + P G+I +P + +P P RLPR P
Sbjct: 1739 SSYRNQAWMSYAGENELPS--QWADSVPLPGYIEAYPRSRYPQSSPSRLPRQYSQP 1792
>gi|124107614 PR domain containing 13 [Homo sapiens]
Length = 707
Score = 31.2 bits (69), Expect = 0.96
Identities = 23/75 (30%), Positives = 28/75 (37%), Gaps = 10/75 (13%)
Query: 36 AAPQPLQTKPNSPARGWITGHPAAAFPPEEPRRLPRPEMPPVWLCLSPVPRQLGGSIPKQ 95
A P P P G + G P + PPEE E P P L G+ Q
Sbjct: 369 AGDPPPPPPPGLPCSGALRGFPLLSVPPEEASAFKHVERAP------PAAAALPGARYAQ 422
Query: 96 MHPAHDGTPGTPILR 110
+ PA PG P+ R
Sbjct: 423 LPPA----PGLPLER 433
>gi|239753692 PREDICTED: hypothetical protein XP_002345754 [Homo
sapiens]
Length = 228
Score = 30.8 bits (68), Expect = 1.3
Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 6/74 (8%)
Query: 11 RMSRRAAPFGASQDGAGWVQLVKRNAAPQPLQTKPNSPARGWITGHPAAAFPPEEPRRLP 70
R +RR G AGW A+P+ L + S G+ P P R P
Sbjct: 29 RRARRRGTVGTEPQAAGWAL----PASPRHLPARIGSAQLGFTRALPPRV--PARARSAP 82
Query: 71 RPEMPPVWLCLSPV 84
R PP L L+PV
Sbjct: 83 RALAPPHKLILTPV 96
>gi|33356556 amelogenin (X chromosome) isoform 3 precursor [Homo
sapiens]
Length = 205
Score = 30.8 bits (68), Expect = 1.3
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 38 PQPLQTKPNSPARGWITGHPAAAFPPEE--PRRLPRPEMPPV 77
PQP+Q +P+ P + HP PP+ P P +PP+
Sbjct: 143 PQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPM 184
>gi|33356558 amelogenin (X chromosome) isoform 2 precursor [Homo
sapiens]
Length = 175
Score = 30.8 bits (68), Expect = 1.3
Identities = 14/42 (33%), Positives = 21/42 (50%), Gaps = 2/42 (4%)
Query: 38 PQPLQTKPNSPARGWITGHPAAAFPPEE--PRRLPRPEMPPV 77
PQP+Q +P+ P + HP PP+ P P +PP+
Sbjct: 113 PQPVQPQPHQPMQPQPPVHPMQPLPPQPPLPPMFPMQPLPPM 154
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.138 0.470
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,650,037
Number of Sequences: 37866
Number of extensions: 885559
Number of successful extensions: 3510
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 108
Number of HSP's that attempted gapping in prelim test: 3396
Number of HSP's gapped (non-prelim): 218
length of query: 263
length of database: 18,247,518
effective HSP length: 100
effective length of query: 163
effective length of database: 14,460,918
effective search space: 2357129634
effective search space used: 2357129634
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.