Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Search of human proteins with 239746970

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746970 PREDICTED: hypothetical protein XP_002343898 [Homo
sapiens]
         (399 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239746972 PREDICTED: hypothetical protein XP_002343899 [Homo ...   791   0.0  
gi|239746970 PREDICTED: hypothetical protein XP_002343898 [Homo ...   791   0.0  
gi|239746974 PREDICTED: hypothetical protein XP_002343900 [Homo ...   783   0.0  
gi|187607308 paraneoplastic antigen like 6A [Homo sapiens]            783   0.0  
gi|142976816 paraneoplastic cancer-testis-brain antigen [Homo sa...   295   6e-80
gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [H...   280   1e-75
gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [H...   280   1e-75
gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [H...   280   1e-75
gi|156766066 paraneoplastic antigen like 5 [Homo sapiens]             274   9e-74
gi|156766064 paraneoplastic antigen like 5 [Homo sapiens]             274   9e-74
gi|24308384 paraneoplastic antigen like 5 [Homo sapiens]              274   9e-74
gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens]          270   2e-72
gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens]          270   2e-72
gi|52486265 paraneoplastic antigen MA1 [Homo sapiens]                 258   5e-69
gi|11464969 paraneoplastic antigen MA2 [Homo sapiens]                 257   1e-68
gi|19923584 modulator of apoptosis 1 [Homo sapiens]                   247   2e-65
gi|221136806 zinc finger, CCHC domain containing 18 [Homo sapiens]    136   3e-32
gi|28557790 zinc finger, CCHC domain containing 12 [Homo sapiens]     136   4e-32
gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [H...   121   1e-27
gi|169216749 PREDICTED: similar to Putative paraneoplastic antig...   121   1e-27
gi|156766054 PNMA-like 1 isoform b [Homo sapiens]                     110   2e-24
gi|39780597 PNMA-like 1 isoform a [Homo sapiens]                      110   2e-24
gi|146219841 PNMA-like 2 [Homo sapiens]                                87   3e-17
gi|199559779 coiled-coil domain containing 8 [Homo sapiens]            43   6e-04
gi|4507373 beta-tubulin cofactor C [Homo sapiens]                      40   0.004
gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]                37   0.024
gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]           35   0.092
gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]           35   0.092
gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]           35   0.092
gi|145312241 differentially expressed in FDCP 6 homolog [Homo sa...    35   0.16 

>gi|239746972 PREDICTED: hypothetical protein XP_002343899 [Homo
           sapiens]
          Length = 399

 Score =  791 bits (2043), Expect = 0.0
 Identities = 399/399 (100%), Positives = 399/399 (100%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED
Sbjct: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
           NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE
Sbjct: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120

Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
           SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE
Sbjct: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180

Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
           MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT
Sbjct: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240

Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
           IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD
Sbjct: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300

Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
           EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV
Sbjct: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360

Query: 361 EAVPGGPGREPEGLLQAGGQEAEELLQEGLKPVLEECDN 399
           EAVPGGPGREPEGLLQAGGQEAEELLQEGLKPVLEECDN
Sbjct: 361 EAVPGGPGREPEGLLQAGGQEAEELLQEGLKPVLEECDN 399


>gi|239746970 PREDICTED: hypothetical protein XP_002343898 [Homo
           sapiens]
          Length = 399

 Score =  791 bits (2043), Expect = 0.0
 Identities = 399/399 (100%), Positives = 399/399 (100%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED
Sbjct: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
           NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE
Sbjct: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120

Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
           SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE
Sbjct: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180

Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
           MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT
Sbjct: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240

Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
           IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD
Sbjct: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300

Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
           EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV
Sbjct: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360

Query: 361 EAVPGGPGREPEGLLQAGGQEAEELLQEGLKPVLEECDN 399
           EAVPGGPGREPEGLLQAGGQEAEELLQEGLKPVLEECDN
Sbjct: 361 EAVPGGPGREPEGLLQAGGQEAEELLQEGLKPVLEECDN 399


>gi|239746974 PREDICTED: hypothetical protein XP_002343900 [Homo
           sapiens]
          Length = 399

 Score =  783 bits (2022), Expect = 0.0
 Identities = 396/399 (99%), Positives = 396/399 (99%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGK FREED
Sbjct: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
           NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE
Sbjct: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120

Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
           SVAGALGVGLRRVCWLRSIGQAVQPWVEAVR QSLGVFSGRDQPAPGEESFEVWLDHTTE
Sbjct: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180

Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
           MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT
Sbjct: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240

Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
           IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD
Sbjct: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300

Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
           EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV
Sbjct: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360

Query: 361 EAVPGGPGREPEGLLQAGGQEAEELLQEGLKPVLEECDN 399
           EAVPGGPGREPEGL QAGGQEAEELLQEGLKPVLEECDN
Sbjct: 361 EAVPGGPGREPEGLRQAGGQEAEELLQEGLKPVLEECDN 399


>gi|187607308 paraneoplastic antigen like 6A [Homo sapiens]
          Length = 399

 Score =  783 bits (2022), Expect = 0.0
 Identities = 396/399 (99%), Positives = 396/399 (99%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGK FREED
Sbjct: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKVFREED 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
           NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE
Sbjct: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120

Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
           SVAGALGVGLRRVCWLRSIGQAVQPWVEAVR QSLGVFSGRDQPAPGEESFEVWLDHTTE
Sbjct: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRYQSLGVFSGRDQPAPGEESFEVWLDHTTE 180

Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
           MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT
Sbjct: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240

Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
           IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD
Sbjct: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300

Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
           EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV
Sbjct: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360

Query: 361 EAVPGGPGREPEGLLQAGGQEAEELLQEGLKPVLEECDN 399
           EAVPGGPGREPEGL QAGGQEAEELLQEGLKPVLEECDN
Sbjct: 361 EAVPGGPGREPEGLRQAGGQEAEELLQEGLKPVLEECDN 399


>gi|142976816 paraneoplastic cancer-testis-brain antigen [Homo
           sapiens]
          Length = 463

 Score =  295 bits (754), Expect = 6e-80
 Identities = 159/343 (46%), Positives = 226/343 (65%), Gaps = 14/343 (4%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           M +T+LQDWCR   +N RR +LILGIPEDC + EF+E+L+ A R +G + V+G+ FR E+
Sbjct: 1   MPLTLLQDWCRGEHLNTRRCMLILGIPEDCGEDEFEETLQEACRHLGRYRVIGRMFRREE 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
           NA A L+EL ++++YAL+PREIPG GGPW V+  PR S  EFL   R+  F E+E + V 
Sbjct: 61  NAQAILLELAQDIDYALLPREIPGKGGPWEVIVKPRNSDGEFLN--RLNRFLEEERRTVS 118

Query: 121 SVAGALGVGLR----RVC-------WLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEE 169
            +   LG        RV        W +++G AVQP +E +  + L VFSG     PG  
Sbjct: 119 DMNRVLGSDTNCSAPRVTISPEFWTWAQTLGAAVQPLLEQMLYRELRVFSGNTISIPGAL 178

Query: 170 SFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALA 229
           +F+ WL+HTTEML +WQ V E E+RRRL+E LRG ALQ+V  L A N + T ++CLAAL 
Sbjct: 179 AFDAWLEHTTEMLQMWQ-VPEGEKRRRLMECLRGPALQVVSGLRASNASITVEECLAALQ 237

Query: 230 QVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQM 289
           QVFG  ES    +VK   A Q++GE++S+FVLRLE LLQ+A+E   ++R + ++ RL+++
Sbjct: 238 QVFGPVESHKIAQVKLCKAYQEAGEKVSSFVLRLEPLLQRAVENNVVSRRNVNQTRLKRV 297

Query: 290 LTRAHLTEPLDEALRKLRMAGRSPSFLEMLGLVRESEAWEASL 332
           L+ A L + L + L+ ++   + P FL ++ L+RE E WEA+L
Sbjct: 298 LSGATLPDKLRDKLKLMKQRRKPPGFLALVKLLREEEEWEATL 340


>gi|169217313 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
           sapiens]
          Length = 601

 Score =  280 bits (717), Expect = 1e-75
 Identities = 164/371 (44%), Positives = 217/371 (58%), Gaps = 46/371 (12%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           +A+ MLQDWCR MGVNA R LLIL IP+DC++ EFQE++ AAL P+G + VL K FR+E 
Sbjct: 191 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 250

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
            A AALVE    +N +L+PR+I G GGPW V+ +P                         
Sbjct: 251 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLP------------------------- 285

Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
                               Q ++P V+ +  + L  FSGR+QP   EESFE WL+   +
Sbjct: 286 --------------------QTLRPLVKTMAYRELRPFSGREQPGCVEESFESWLEDAKD 325

Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
           ML +W   SERERRRRLL+ L G AL +V  LL E+P  +AQDCL AL QVF   ++  T
Sbjct: 326 MLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCLTALGQVFRSRDTWMT 385

Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
            R+K LT  Q   E L AFV+RLE LLQKA+EK A+  A A+ +RLRQ+L+RA  +E L 
Sbjct: 386 SRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLRLRQVLSRARPSEALQ 445

Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
           + LR++++  R P FL +L L+R+ EAW ASLARS +      A   +   A A+AS  +
Sbjct: 446 DTLRRMQLERRPPDFLRLLRLIRDMEAWAASLARSQQGVAWAAAPVESEDPAAAQASPAQ 505

Query: 360 VEAVPGGPGRE 370
            +A    PG E
Sbjct: 506 GDASEADPGAE 516


>gi|169216516 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
           sapiens]
          Length = 541

 Score =  280 bits (717), Expect = 1e-75
 Identities = 164/371 (44%), Positives = 217/371 (58%), Gaps = 46/371 (12%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           +A+ MLQDWCR MGVNA R LLIL IP+DC++ EFQE++ AAL P+G + VL K FR+E 
Sbjct: 131 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 190

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
            A AALVE    +N +L+PR+I G GGPW V+ +P                         
Sbjct: 191 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLP------------------------- 225

Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
                               Q ++P V+ +  + L  FSGR+QP   EESFE WL+   +
Sbjct: 226 --------------------QTLRPLVKTMAYRELRPFSGREQPGCVEESFESWLEDAKD 265

Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
           ML +W   SERERRRRLL+ L G AL +V  LL E+P  +AQDCL AL QVF   ++  T
Sbjct: 266 MLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCLTALGQVFRSRDTWMT 325

Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
            R+K LT  Q   E L AFV+RLE LLQKA+EK A+  A A+ +RLRQ+L+RA  +E L 
Sbjct: 326 SRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLRLRQVLSRARPSEALQ 385

Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
           + LR++++  R P FL +L L+R+ EAW ASLARS +      A   +   A A+AS  +
Sbjct: 386 DTLRRMQLERRPPDFLRLLRLIRDMEAWAASLARSQQGVAWAAAPVESEDPAAAQASPAQ 445

Query: 360 VEAVPGGPGRE 370
            +A    PG E
Sbjct: 446 GDASEADPGAE 456


>gi|239746976 PREDICTED: similar to paraneoplastic antigen MA1 [Homo
           sapiens]
          Length = 601

 Score =  280 bits (717), Expect = 1e-75
 Identities = 164/371 (44%), Positives = 217/371 (58%), Gaps = 46/371 (12%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           +A+ MLQDWCR MGVNA R LLIL IP+DC++ EFQE++ AAL P+G + VL K FR+E 
Sbjct: 191 IALAMLQDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 250

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
            A AALVE    +N +L+PR+I G GGPW V+ +P                         
Sbjct: 251 GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLP------------------------- 285

Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
                               Q ++P V+ +  + L  FSGR+QP   EESFE WL+   +
Sbjct: 286 --------------------QTLRPLVKTMAYRELRPFSGREQPGCVEESFESWLEDAKD 325

Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
           ML +W   SERERRRRLL+ L G AL +V  LL E+P  +AQDCL AL QVF   ++  T
Sbjct: 326 MLQLWCHASERERRRRLLDSLDGLALDIVSGLLEEDPDFSAQDCLTALGQVFRSRDTWMT 385

Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
            R+K LT  Q   E L AFV+RLE LLQKA+EK A+  A A+ +RLRQ+L+RA  +E L 
Sbjct: 386 SRMKFLTCTQGPQEGLFAFVVRLEGLLQKAVEKGAVHPAMANHLRLRQVLSRARPSEALQ 445

Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
           + LR++++  R P FL +L L+R+ EAW ASLARS +      A   +   A A+AS  +
Sbjct: 446 DTLRRMQLERRPPDFLRLLRLIRDMEAWAASLARSQQGVAWAAAPVESEDPAAAQASPAQ 505

Query: 360 VEAVPGGPGRE 370
            +A    PG E
Sbjct: 506 GDASEADPGAE 516


>gi|156766066 paraneoplastic antigen like 5 [Homo sapiens]
          Length = 448

 Score =  274 bits (701), Expect = 9e-74
 Identities = 165/409 (40%), Positives = 234/409 (57%), Gaps = 32/409 (7%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MA+T+L+DWC+ M ++ R+ LLI+GIP +C + E Q++++A L+P+  + VLG+ FR ED
Sbjct: 1   MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
           NA A  +EL   VNY  +P  IPG GG W VV  PR   +EFL   R+ +F + EG+ + 
Sbjct: 61  NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLS--RLNYFLKDEGRSMT 118

Query: 121 SVAGALGVGLRRVCWL--RSIGQAVQPWV---------EAVRCQSLGVFSGRDQPAPGEE 169
            VA ALG      C L   S+   V P V         E++  + L VFSG   P+PGEE
Sbjct: 119 DVARALGC-----CSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEE 173

Query: 170 SFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALA 229
           +FE WL+  TE++ +WQ VSE E+RRRLLE LRG AL ++  L A N + T + CL AL 
Sbjct: 174 TFEDWLEQVTEIMPIWQ-VSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALK 232

Query: 230 QVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQM 289
           Q+FGD E     + + L    + GE++S F+LRLE LLQKA+ K  L+  S D +RL+ +
Sbjct: 233 QIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHL 292

Query: 290 LTRAHLTEPLDEALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARA- 348
           L R  +T  L   L  L   G  P+FLE++ L+R+ E WE + A     +   G G  A 
Sbjct: 293 LARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGAS 352

Query: 349 GAQAVARASTKVEAVPGGPGREPEGLLQAG--GQEAEELLQEGLKPVLE 395
           G QA A AS             P+  +QA      + + +Q GL P+++
Sbjct: 353 GRQARAEASVSA----------PQATVQARSFSDSSPQTIQGGLPPLVK 391


>gi|156766064 paraneoplastic antigen like 5 [Homo sapiens]
          Length = 448

 Score =  274 bits (701), Expect = 9e-74
 Identities = 165/409 (40%), Positives = 234/409 (57%), Gaps = 32/409 (7%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MA+T+L+DWC+ M ++ R+ LLI+GIP +C + E Q++++A L+P+  + VLG+ FR ED
Sbjct: 1   MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
           NA A  +EL   VNY  +P  IPG GG W VV  PR   +EFL   R+ +F + EG+ + 
Sbjct: 61  NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLS--RLNYFLKDEGRSMT 118

Query: 121 SVAGALGVGLRRVCWL--RSIGQAVQPWV---------EAVRCQSLGVFSGRDQPAPGEE 169
            VA ALG      C L   S+   V P V         E++  + L VFSG   P+PGEE
Sbjct: 119 DVARALGC-----CSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEE 173

Query: 170 SFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALA 229
           +FE WL+  TE++ +WQ VSE E+RRRLLE LRG AL ++  L A N + T + CL AL 
Sbjct: 174 TFEDWLEQVTEIMPIWQ-VSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALK 232

Query: 230 QVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQM 289
           Q+FGD E     + + L    + GE++S F+LRLE LLQKA+ K  L+  S D +RL+ +
Sbjct: 233 QIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHL 292

Query: 290 LTRAHLTEPLDEALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARA- 348
           L R  +T  L   L  L   G  P+FLE++ L+R+ E WE + A     +   G G  A 
Sbjct: 293 LARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGAS 352

Query: 349 GAQAVARASTKVEAVPGGPGREPEGLLQAG--GQEAEELLQEGLKPVLE 395
           G QA A AS             P+  +QA      + + +Q GL P+++
Sbjct: 353 GRQARAEASVSA----------PQATVQARSFSDSSPQTIQGGLPPLVK 391


>gi|24308384 paraneoplastic antigen like 5 [Homo sapiens]
          Length = 448

 Score =  274 bits (701), Expect = 9e-74
 Identities = 165/409 (40%), Positives = 234/409 (57%), Gaps = 32/409 (7%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MA+T+L+DWC+ M ++ R+ LLI+GIP +C + E Q++++A L+P+  + VLG+ FR ED
Sbjct: 1   MALTLLEDWCKGMDMDPRKALLIVGIPMECSEVEIQDTVKAGLQPLCAYRVLGRMFRRED 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
           NA A  +EL   VNY  +P  IPG GG W VV  PR   +EFL   R+ +F + EG+ + 
Sbjct: 61  NAKAVFIELADTVNYTTLPSHIPGKGGSWEVVVKPRNPDDEFLS--RLNYFLKDEGRSMT 118

Query: 121 SVAGALGVGLRRVCWL--RSIGQAVQPWV---------EAVRCQSLGVFSGRDQPAPGEE 169
            VA ALG      C L   S+   V P V         E++  + L VFSG   P+PGEE
Sbjct: 119 DVARALGC-----CSLPAESLDAEVMPQVRSPPLEPPKESMWYRKLKVFSGTASPSPGEE 173

Query: 170 SFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALA 229
           +FE WL+  TE++ +WQ VSE E+RRRLLE LRG AL ++  L A N + T + CL AL 
Sbjct: 174 TFEDWLEQVTEIMPIWQ-VSEVEKRRRLLESLRGPALSIMRVLQANNDSITVEQCLDALK 232

Query: 230 QVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQM 289
           Q+FGD E     + + L    + GE++S F+LRLE LLQKA+ K  L+  S D +RL+ +
Sbjct: 233 QIFGDKEDFRASQFRFLQTSPKIGEKVSTFLLRLEPLLQKAVHKSPLSVRSTDMIRLKHL 292

Query: 290 LTRAHLTEPLDEALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARA- 348
           L R  +T  L   L  L   G  P+FLE++ L+R+ E WE + A     +   G G  A 
Sbjct: 293 LARVAMTPALRGKLELLDQRGCPPNFLELMKLIRDEEEWENTEAVMKNKEKPSGRGRGAS 352

Query: 349 GAQAVARASTKVEAVPGGPGREPEGLLQAG--GQEAEELLQEGLKPVLE 395
           G QA A AS             P+  +QA      + + +Q GL P+++
Sbjct: 353 GRQARAEASVSA----------PQATVQARSFSDSSPQTIQGGLPPLVK 391


>gi|169216507 PREDICTED: similar to hCG1645335 [Homo sapiens]
          Length = 409

 Score =  270 bits (689), Expect = 2e-72
 Identities = 161/383 (42%), Positives = 216/383 (56%), Gaps = 49/383 (12%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MA+ ML+DWCRWMG NA R LLILGIP+DC + EFQE++ AAL P+G + VL K FR+E 
Sbjct: 1   MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
            A AALVE    +N +L+P +IPG GGPW V+F+P                         
Sbjct: 61  GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLP------------------------- 95

Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
                                  QP +E    + L  FS R+QP   EESFE W++H  +
Sbjct: 96  -----------------------QPVLENRAYRELRPFSRREQPGCEEESFESWVEHAKD 132

Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
           ML +W   SERE++R LLE L G AL++V  LL E+   +A DCLAAL QVF + +++ T
Sbjct: 133 MLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFRNQDTRMT 192

Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
            R+K LT  Q   E L AFV+RLE LLQ+A+EK A+  A A+ +RL+Q+L+ A  +E L 
Sbjct: 193 SRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWARPSEALQ 252

Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
           + LR +++  R P FL +L L+RE EAW A  ARS +      A   +   A A+AS  +
Sbjct: 253 DTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQ 312

Query: 360 VEAVPGGPGREPEGLLQAGGQEA 382
             A   GPG E      +  +EA
Sbjct: 313 GNASEAGPGAEDAAEAASATKEA 335


>gi|169216732 PREDICTED: similar to hCG1645335 [Homo sapiens]
          Length = 409

 Score =  270 bits (689), Expect = 2e-72
 Identities = 161/383 (42%), Positives = 216/383 (56%), Gaps = 49/383 (12%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MA+ ML+DWCRWMG NA R LLILGIP+DC + EFQE++ AAL P+G + VL K FR+E 
Sbjct: 1   MALAMLRDWCRWMGANAERSLLILGIPDDCKEHEFQEAVRAALSPLGRYRVLTKHFRKEL 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
            A AALVE    +N +L+P +IPG GGPW V+F+P                         
Sbjct: 61  GAKAALVEFAEYLNRSLIPHQIPGNGGPWKVIFLP------------------------- 95

Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
                                  QP +E    + L  FS R+QP   EESFE W++H  +
Sbjct: 96  -----------------------QPVLENRAYRELRPFSRREQPGCEEESFESWVEHAKD 132

Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQAT 240
           ML +W   SERE++R LLE L G AL++V  LL E+   +A DCLAAL QVF + +++ T
Sbjct: 133 MLQLWCHASEREKKRWLLESLGGPALEVVSGLLEEDTNLSALDCLAALGQVFRNQDTRMT 192

Query: 241 IRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLD 300
            R+K LT  Q   E L AFV+RLE LLQ+A+EK A+  A A+ +RL+Q+L+ A  +E L 
Sbjct: 193 SRLKFLTCTQGPQEGLFAFVVRLEGLLQRAVEKGAVCPALANYLRLQQVLSWARPSEALQ 252

Query: 301 EALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARAS-TK 359
           + LR +++  R P FL +L L+RE EAW A  ARS +      A   +   A A+AS  +
Sbjct: 253 DTLRGMQLEKRPPGFLGLLRLIREMEAWAAFPARSQQGVAWAAAPVESEDPAAAQASPAQ 312

Query: 360 VEAVPGGPGREPEGLLQAGGQEA 382
             A   GPG E      +  +EA
Sbjct: 313 GNASEAGPGAEDAAEAASATKEA 335


>gi|52486265 paraneoplastic antigen MA1 [Homo sapiens]
          Length = 353

 Score =  258 bits (660), Expect = 5e-69
 Identities = 148/339 (43%), Positives = 212/339 (62%), Gaps = 14/339 (4%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MA+T+L+DWCR M VN++R LL+ GIP +CD+AE +E+L+AA+ P   + +LG+ F  E+
Sbjct: 1   MAMTLLEDWCRGMDVNSQRALLVWGIPVNCDEAEIEETLQAAM-PQVSYRMLGRMFWREE 59

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
           NA AAL+EL   V+YA +PRE+PG GG W V+F P  S  EFL   R+  F  +EG  V+
Sbjct: 60  NAKAALLELTGAVDYAAIPREMPGKGGVWKVLFKPPTSDAEFLE--RLHLFLAREGWTVQ 117

Query: 121 SVAGALGV-------GLRRVCWLRS--IGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESF 171
            VA  LG        G      + +  +   +QP VE++  + L +FSGRD P PGEE+F
Sbjct: 118 DVARVLGFQNPTPTPGPEMPAEMLNYILDNVIQPLVESIWYKRLTLFSGRDIPGPGEETF 177

Query: 172 EVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQV 231
           + WL+HT E+L  WQ VS+ E+RRRL+E LRG A  ++  L + NPA T  +CL AL QV
Sbjct: 178 DPWLEHTNEVLEEWQ-VSDVEKRRRLMESLRGPAADVIRILKSNNPAITTAECLKALEQV 236

Query: 232 FGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLT 291
           FG  ES    ++K L   Q  GE+LSA+V+RLE LLQK +EK A+ + + ++ RL Q++ 
Sbjct: 237 FGSVESSRDAQIKFLNTYQNPGEKLSAYVIRLEPLLQKVVEKGAIDKDNVNQARLEQVIA 296

Query: 292 RAHLTEPLDEALRKLRMA-GRSPSFLEMLGLVRESEAWE 329
            A+ +  +   L       G +P+  ++L  +RE EA E
Sbjct: 297 GANHSGAIRRQLWLTGAGEGPAPNLFQLLVQIREEEAKE 335


>gi|11464969 paraneoplastic antigen MA2 [Homo sapiens]
          Length = 364

 Score =  257 bits (656), Expect = 1e-68
 Identities = 148/358 (41%), Positives = 220/358 (61%), Gaps = 17/358 (4%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MA+ +L+DWCR M V+ ++ L++ GIP D ++AE QE L+  L+ +G + +LGK FR+++
Sbjct: 1   MALALLEDWCRIMSVDEQKSLMVTGIPADFEEAEIQEVLQETLKSLGRYRLLGKIFRKQE 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
           NA A L+EL  + + + +P E+ G GG W V+F       EFL   R+  F E+EGQ V 
Sbjct: 61  NANAVLLELLEDTDVSAIPSEVQGKGGVWKVIFKTPNQDTEFLE--RLNLFLEKEGQTVS 118

Query: 121 SVAGALG-----------VGLRRVCWL--RSIGQAVQPWVEAVRCQSLGVFSGRDQPAPG 167
            +  ALG           +    +  L  +++  A QP +  +R + L VFSG   PAP 
Sbjct: 119 GMFRALGQEGVSPATVPCISPELLAHLLGQAMAHAPQPLLP-MRYRKLRVFSGSAVPAPE 177

Query: 168 EESFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAA 227
           EESFEVWL+  TE++  W  V+E E++R L E LRG AL L+H + A+NP+ + ++CL A
Sbjct: 178 EESFEVWLEQATEIVKEWP-VTEAEKKRWLAESLRGPALDLMHIVQADNPSISVEECLEA 236

Query: 228 LAQVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLR 287
             QVFG  ES+ T +V+ L   Q+ GE++SA+VLRLE LL++A+EK A+ R  AD+VRL 
Sbjct: 237 FKQVFGSLESRRTAQVRYLKTYQEEGEKVSAYVLRLETLLRRAVEKRAIPRRIADQVRLE 296

Query: 288 QMLTRAHLTEPLDEALRKLRMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAG 345
           Q++  A L + L   LR+L+  G  PSFLE++ ++RE E  EAS       + +E  G
Sbjct: 297 QVMAGATLNQMLWCRLRELKDQGPPPSFLELMKVIREEEEEEASFENESIEEPEERDG 354


>gi|19923584 modulator of apoptosis 1 [Homo sapiens]
          Length = 351

 Score =  247 bits (630), Expect = 2e-65
 Identities = 141/344 (40%), Positives = 207/344 (60%), Gaps = 23/344 (6%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           M + +L+DWCR M +N R+ LLI GI + C  AE +E+L+A L P+G + +LG+ FR ++
Sbjct: 1   MTLRLLEDWCRGMDMNPRKALLIAGISQSCSVAEIEEALQAGLAPLGEYRLLGRMFRRDE 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
           N   ALV L  E ++ALVP+EIPG GG W V+F P      F  L R+  F   EG  V 
Sbjct: 61  NRKVALVGLTAETSHALVPKEIPGKGGIWRVIFKPPDPDNTF--LSRLNEFLAGEGMTVG 118

Query: 121 SVAGALG---------VGLRRVCWLRSIGQ---AVQPWVEAVRCQSLGVFSGRDQPAPGE 168
            ++ ALG          G+    W   + Q   A+QP ++ ++ + L VFSGR+ P PGE
Sbjct: 119 ELSRALGHENGSLDPEQGMIPEMWAPMLAQALEALQPALQCLKYKKLRVFSGRESPEPGE 178

Query: 169 ESFEVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAAL 228
           E F  W+ HTT+M+  WQ V + E+RRRLLE LRG AL ++  L   NP  T  +CL AL
Sbjct: 179 EEFGRWMFHTTQMIKAWQ-VPDVEKRRRLLESLRGPALDVIRVLKINNPLITVDECLQAL 237

Query: 229 AQVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQ 288
            +VFG  ++   ++VK LT  Q+  E+LSA+VLRLE LLQK +++ A+ R + ++ RL Q
Sbjct: 238 EEVFGVTDNPRELQVKYLTTYQKDEEKLSAYVLRLEPLLQKLVQRGAIERDAVNQARLDQ 297

Query: 289 MLTRAHLTEPLDEALRK---LRMAGRSPSFLEMLGLVRESEAWE 329
           ++  A     + + +R+   L   G +P FL++L L+++ EA E
Sbjct: 298 VIAGA-----VHKTIRRELNLPEDGPAPGFLQLLVLIKDYEAAE 336


>gi|221136806 zinc finger, CCHC domain containing 18 [Homo sapiens]
          Length = 403

 Score =  136 bits (343), Expect = 3e-32
 Identities = 88/234 (37%), Positives = 133/234 (56%), Gaps = 13/234 (5%)

Query: 136 LRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTEMLHVWQGVSERERRR 195
           LRS+G+++ P V  +  +++ +FSGR  PA G+E+FE WL    E+L  W  +SE E+ +
Sbjct: 26  LRSLGRSLCPLVVKMAERNMKLFSGRVVPAQGKETFENWLIQVNEVLPDWS-MSEEEKLK 84

Query: 196 RLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQATIRVKCLTAQQQSGER 255
           RL++ LRG A +++  L A NP  +  D L A+  VFG++ES  T   K     Q  GE+
Sbjct: 85  RLMKTLRGPAREVMRLLQAANPNLSVADFLRAMKLVFGESESSVTAHGKFFNTLQAQGEK 144

Query: 256 LSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLDEALRK-LRMAG---- 310
            S +V+RLEV LQ A++   LA   A++ RL+Q+L  A L   L   L+  LRM      
Sbjct: 145 ASLYVIRLEVQLQNAIQAGILAEKDANQTRLQQLLLGAELNRDLRFRLKHLLRMYANKQE 204

Query: 311 RSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARA-------GAQAVARAS 357
           R P+FLE++ ++RE E W+ +  +  R +  E    RA       GAQ +A +S
Sbjct: 205 RLPNFLELIKMIREEEDWDDAFIKRKRPKRSEPIMERAASPVAFQGAQPIAISS 258


>gi|28557790 zinc finger, CCHC domain containing 12 [Homo sapiens]
          Length = 402

 Score =  136 bits (342), Expect = 4e-32
 Identities = 83/230 (36%), Positives = 130/230 (56%), Gaps = 6/230 (2%)

Query: 136 LRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTEMLHVWQGVSERERRR 195
           LRS+G+++ P + ++  +++ +FSGR  PA GEE+FE WL     +L  W  +SE E+ +
Sbjct: 26  LRSLGRSLGPIMASMADRNMKLFSGRVVPAQGEETFENWLTQVNGVLPDWN-MSEEEKLK 84

Query: 196 RLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQATIRVKCLTAQQQSGER 255
           RL++ LRG A +++  L A NP  +  D L A+  VFG++ES  T   K     Q  GE+
Sbjct: 85  RLMKTLRGPAREVMRVLQATNPNLSVADFLRAMKLVFGESESSVTAHGKFFNTLQAQGEK 144

Query: 256 LSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLDEALRK-LRMAG---- 310
            S +V+RLEV LQ A++   +A   A+R RL+Q+L    L+  L   L+  LRM      
Sbjct: 145 ASLYVIRLEVQLQNAIQAGIIAEKDANRTRLQQLLLGGELSRDLRLRLKDFLRMYANEQE 204

Query: 311 RSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKV 360
           R P+FLE++ +VRE E W+ +  +  R +  E    RA +    + S  +
Sbjct: 205 RLPNFLELIRMVREEEDWDDAFIKRKRPKRSESMVERAVSPVAFQGSPPI 254


>gi|169216514 PREDICTED: similar to paraneoplastic antigen MA2 [Homo
           sapiens]
          Length = 340

 Score =  121 bits (303), Expect = 1e-27
 Identities = 57/102 (55%), Positives = 74/102 (72%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MA+ ML+DWCR MGVNA R LLIL IP+DC++ EFQE++ AAL P+G + VL K FR+E 
Sbjct: 1   MALAMLRDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEF 102
            A AALVE    +N +L+PR+I G GGPW V+ +P+    EF
Sbjct: 61  GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLPQALDAEF 102



 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 56/134 (41%), Positives = 74/134 (55%), Gaps = 8/134 (5%)

Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
           +V  A G  + R  W++     +Q  +E    Q L  FSGR+QP   EESFE W++H  +
Sbjct: 208 AVGEARGTNVTRA-WVQPRRCTLQAVLENRAYQELRPFSGREQPGCEEESFESWMEHAKD 266

Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDC-------LAALAQVFG 233
           ML +W   SERER+R LLE L G AL +V  LL E+P   A DC        A L Q FG
Sbjct: 267 MLQLWYHASERERKRWLLESLGGPALDVVSGLLEEDPNLAALDCQVLLDCWAAVLGQAFG 326

Query: 234 DNESQATIRVKCLT 247
           + + + T R+K LT
Sbjct: 327 NRDPRMTSRLKFLT 340


>gi|169216749 PREDICTED: similar to Putative paraneoplastic
           antigen-like protein 6B-like protein [Homo sapiens]
          Length = 340

 Score =  121 bits (303), Expect = 1e-27
 Identities = 57/102 (55%), Positives = 74/102 (72%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MA+ ML+DWCR MGVNA R LLIL IP+DC++ EFQE++ AAL P+G + VL K FR+E 
Sbjct: 1   MALAMLRDWCRRMGVNAERSLLILDIPDDCEEHEFQEAVRAALSPLGRYRVLIKVFRKEL 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEF 102
            A AALVE    +N +L+PR+I G GGPW V+ +P+    EF
Sbjct: 61  GARAALVEFAEGLNQSLIPRQIAGKGGPWKVISLPQALDAEF 102



 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 56/134 (41%), Positives = 74/134 (55%), Gaps = 8/134 (5%)

Query: 121 SVAGALGVGLRRVCWLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESFEVWLDHTTE 180
           +V  A G  + R  W++     +Q  +E    Q L  FSGR+QP   EESFE W++H  +
Sbjct: 208 AVGEARGTNVTRA-WVQPRRCTLQAVLENRAYQELRPFSGREQPGCKEESFESWMEHAKD 266

Query: 181 MLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQDC-------LAALAQVFG 233
           ML +W   SERER+R LLE L G AL +V  LL E+P   A DC        A L Q FG
Sbjct: 267 MLQLWYHASERERKRWLLESLGGPALDVVSGLLEEDPNLAALDCQVLLDCWAAVLGQAFG 326

Query: 234 DNESQATIRVKCLT 247
           + + + T R+K LT
Sbjct: 327 NRDPRMTSRLKFLT 340


>gi|156766054 PNMA-like 1 isoform b [Homo sapiens]
          Length = 378

 Score =  110 bits (276), Expect = 2e-24
 Identities = 73/226 (32%), Positives = 106/226 (46%), Gaps = 24/226 (10%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MA+ +L+DWCR M V+  R LL+ GIPEDC  AE +E+L   L P+G + VL K F  E+
Sbjct: 5   MAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIFVREE 64

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
           N  AAL+E+   VN + +PRE PG GG W VV        EF  L  +  F + EG+  E
Sbjct: 65  NVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEF--LKNLNEFLDAEGRTWE 122

Query: 121 SVAGALGVGLRRVC---------WLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESF 171
            V   L +    +          W  ++G  +   V+ + C    + S  +  A     F
Sbjct: 123 DVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAAEF 182

Query: 172 EVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENP 217
                   E +  W   + R+ ++       G A ++  AL AE P
Sbjct: 183 --------EEMAAWALAAGRKVKKE-----PGLAAEVGSALKAETP 215


>gi|39780597 PNMA-like 1 isoform a [Homo sapiens]
          Length = 439

 Score =  110 bits (276), Expect = 2e-24
 Identities = 73/226 (32%), Positives = 106/226 (46%), Gaps = 24/226 (10%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MA+ +L+DWCR M V+  R LL+ GIPEDC  AE +E+L   L P+G + VL K F  E+
Sbjct: 5   MAMNLLEDWCRGMEVDIHRSLLVTGIPEDCGQAEIEETLNGVLSPLGPYRVLNKIFVREE 64

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVE 120
           N  AAL+E+   VN + +PRE PG GG W VV        EF  L  +  F + EG+  E
Sbjct: 65  NVKAALIEVGEGVNLSTIPREFPGRGGVWRVVCRDPTQDAEF--LKNLNEFLDAEGRTWE 122

Query: 121 SVAGALGVGLRRVC---------WLRSIGQAVQPWVEAVRCQSLGVFSGRDQPAPGEESF 171
            V   L +    +          W  ++G  +   V+ + C    + S  +  A     F
Sbjct: 123 DVVRLLQLNHPTLSQNQHQPPENWAEALGVLLGAVVQIIFCMDAEIRSREEARAQEAAEF 182

Query: 172 EVWLDHTTEMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENP 217
                   E +  W   + R+ ++       G A ++  AL AE P
Sbjct: 183 --------EEMAAWALAAGRKVKKE-----PGLAAEVGSALKAETP 215


>gi|146219841 PNMA-like 2 [Homo sapiens]
          Length = 635

 Score = 87.0 bits (214), Expect = 3e-17
 Identities = 43/103 (41%), Positives = 61/103 (59%)

Query: 1   MAVTMLQDWCRWMGVNARRGLLILGIPEDCDDAEFQESLEAALRPMGHFTVLGKAFREED 60
           MA+++LQDWCR + V+A R LL+ GIPE  + A+ +  L+  L P+G F +        +
Sbjct: 1   MAMSLLQDWCRSLDVDAHRALLVTGIPEGLEQADVEAVLQPTLLPLGTFRLRHMKALMNE 60

Query: 61  NATAALVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFL 103
            A AALVE   +VN+A +PREIPG  G W V++  R      L
Sbjct: 61  KAQAALVEFVEDVNHAAIPREIPGKDGVWRVLWKDRAQDTRVL 103


>gi|199559779 coiled-coil domain containing 8 [Homo sapiens]
          Length = 538

 Score = 42.7 bits (99), Expect = 6e-04
 Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 66  LVELDREVNYALVPREIPGTGGPWNVVFVPRCSGEEFLGLGRVFHFPEQEGQMVESVA 123
           ++++  +V+Y L+PRE+   GG W V+  P     EF    R+  F E+EG+ +E VA
Sbjct: 1   MLQIGEDVDYLLIPREVRLAGGVWRVISKPATKEAEF--RERLTQFLEEEGRTLEDVA 56


>gi|4507373 beta-tubulin cofactor C [Homo sapiens]
          Length = 346

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 45/155 (29%), Positives = 69/155 (44%), Gaps = 12/155 (7%)

Query: 224 CLAALAQVFGDNESQATIRVKCLTAQQQSGERLSAFVLRLEVLLQKAMEKEA----LARA 279
           C AA  +  GD ESQ  + +     Q++  ER      R +    + +EKE     +A  
Sbjct: 6   CSAAAVRT-GDMESQRDLSLVPERLQRREQERQLEVERRKQKRQNQEVEKENSHFFVATF 64

Query: 280 SADRVRLRQMLTRAHLTEPLDEALRKL----RMAGRSPSFLEMLGLVRESEAW---EASL 332
           + +R  + ++L RA   E L+EA  +L    ++   S  FL    L +  EA    +A+L
Sbjct: 65  ARERAAVEELLERAESVERLEEAASRLQGLQKLINDSVFFLAAYDLRQGQEALARLQAAL 124

Query: 333 ARSVRAQTQEGAGARAGAQAVARASTKVEAVPGGP 367
           A   R    +   A       A +STKV+A PG P
Sbjct: 125 AERRRGLQPKKRFAFKTRGKDAASSTKVDAAPGIP 159


>gi|153791497 ciliary rootlet coiled-coil [Homo sapiens]
          Length = 2017

 Score = 37.4 bits (85), Expect = 0.024
 Identities = 42/147 (28%), Positives = 67/147 (45%), Gaps = 9/147 (6%)

Query: 254 ERLSAFVLRLEVL-LQKAMEKEALARASADRVRLRQMLTRAHLTE-PLDEALRKLRMAGR 311
           E LS   L+ ++L  +KA   EAL +A A RV L   +T+    E  L ++L KL     
Sbjct: 687 EALSRATLQRDMLQAEKAEVAEALTKAEAGRVELELSMTKLRAEEASLQDSLSKLSALNE 746

Query: 312 S--PSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKVEAVPGGPGR 369
           S     L++  LV + E  +++L    R   QE   AR   + +     + E    G   
Sbjct: 747 SLAQDKLDLNRLVAQLEEEKSALQGRQRQAEQEATVAREEQERLEELRLEQEVARQG--- 803

Query: 370 EPEGLLQAGGQEAEELLQEGLKPVLEE 396
             EG L+   ++A+E L++ L  +  E
Sbjct: 804 -LEGSLRV-AEQAQEALEQQLPTLRHE 828



 Score = 29.6 bits (65), Expect = 5.0
 Identities = 45/183 (24%), Positives = 67/183 (36%), Gaps = 13/183 (7%)

Query: 189  SERERRRRLLEGLRGTALQLVHALLAENPARTAQDCLAALAQVFGDNESQATIRVKCLTA 248
            SE  R  R L  L+G   +L     AE  +R  ++ L    ++     S   +R +   A
Sbjct: 1294 SENTRLGRELAELQG---RLALGERAEKESR--RETLGLRQRLLKGEASLEVMRQELQVA 1348

Query: 249  QQQSGERLSAFVLRLEVLLQKAMEKEALARASADRVRLRQMLTRAHLTEPLDEALRKLRM 308
            Q++  E+   F  R   LL    E     +   D  R  ++   A   E  +  LR    
Sbjct: 1349 QRKLQEQEGEFRTRERRLLGSLEEARGTEKQQLDHARGLELKLEAARAEAAELGLRLSAA 1408

Query: 309  AGRSPSFLEMLGLVR-ESEAWEASLARSVRAQTQEGAGARAGAQAVARASTKVEAVPGGP 367
             GR+      L  V  +  A EA L   +R+  + G G         R       VPG P
Sbjct: 1409 EGRAQGLEAELARVEVQRRAAEAQLG-GLRSALRRGLGLGRAPSPAPR------PVPGSP 1461

Query: 368  GRE 370
             R+
Sbjct: 1462 ARD 1464


>gi|116284396 myosin, heavy chain 14 isoform 1 [Homo sapiens]
          Length = 2003

 Score = 35.4 bits (80), Expect = 0.092
 Identities = 66/254 (25%), Positives = 98/254 (38%), Gaps = 55/254 (21%)

Query: 190  ERERRRRLLEGLRGTALQLVHALLA----ENPAR-----TAQDCLAALAQVFGDNESQAT 240
            E+++R   L    G   + + A LA    E  AR     + ++  AALA+   D ES+  
Sbjct: 1098 EQQQRAEELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLESERV 1157

Query: 241  IRVKCLTAQQQSGERLSAFVLRLEVLLQKA-MEKEALARASADRVRLRQML---TRAHLT 296
             R K    ++  GE L A    LE  L     ++E  ++   +   L++ L   TR H  
Sbjct: 1158 ARTKAEKQRRDLGEELEALRGELEDTLDSTNAQQELRSKREQEVTELKKTLEEETRIHEA 1217

Query: 297  ----------EPLDEALRKLRMAGRSPSFLEMLGLVRESEAWE--ASLA----------- 333
                      + L E   +L  A R     E   L  E+E  E  A L+           
Sbjct: 1218 AVQELRQRHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAELSSLQTARQEGEQ 1277

Query: 334  --RSVRAQTQE-----GAGARAGAQA---VARASTKVEAVPGGPGREPEGLL-------- 375
              R +  Q QE     G G RA A+A   + RA  ++E V G         +        
Sbjct: 1278 RRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGALNEAESKTIRLSKELSS 1337

Query: 376  -QAGGQEAEELLQE 388
             +A   +A+ELLQE
Sbjct: 1338 TEAQLHDAQELLQE 1351


>gi|116284394 myosin, heavy chain 14 isoform 2 [Homo sapiens]
          Length = 1995

 Score = 35.4 bits (80), Expect = 0.092
 Identities = 66/254 (25%), Positives = 98/254 (38%), Gaps = 55/254 (21%)

Query: 190  ERERRRRLLEGLRGTALQLVHALLA----ENPAR-----TAQDCLAALAQVFGDNESQAT 240
            E+++R   L    G   + + A LA    E  AR     + ++  AALA+   D ES+  
Sbjct: 1090 EQQQRAEELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLESERV 1149

Query: 241  IRVKCLTAQQQSGERLSAFVLRLEVLLQKA-MEKEALARASADRVRLRQML---TRAHLT 296
             R K    ++  GE L A    LE  L     ++E  ++   +   L++ L   TR H  
Sbjct: 1150 ARTKAEKQRRDLGEELEALRGELEDTLDSTNAQQELRSKREQEVTELKKTLEEETRIHEA 1209

Query: 297  ----------EPLDEALRKLRMAGRSPSFLEMLGLVRESEAWE--ASLA----------- 333
                      + L E   +L  A R     E   L  E+E  E  A L+           
Sbjct: 1210 AVQELRQRHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAELSSLQTARQEGEQ 1269

Query: 334  --RSVRAQTQE-----GAGARAGAQA---VARASTKVEAVPGGPGREPEGLL-------- 375
              R +  Q QE     G G RA A+A   + RA  ++E V G         +        
Sbjct: 1270 RRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGALNEAESKTIRLSKELSS 1329

Query: 376  -QAGGQEAEELLQE 388
             +A   +A+ELLQE
Sbjct: 1330 TEAQLHDAQELLQE 1343


>gi|224831241 myosin, heavy chain 14 isoform 3 [Homo sapiens]
          Length = 2036

 Score = 35.4 bits (80), Expect = 0.092
 Identities = 66/254 (25%), Positives = 98/254 (38%), Gaps = 55/254 (21%)

Query: 190  ERERRRRLLEGLRGTALQLVHALLA----ENPAR-----TAQDCLAALAQVFGDNESQAT 240
            E+++R   L    G   + + A LA    E  AR     + ++  AALA+   D ES+  
Sbjct: 1131 EQQQRAEELRAQLGRKEEELQAALARAEDEGGARAQLLKSLREAQAALAEAQEDLESERV 1190

Query: 241  IRVKCLTAQQQSGERLSAFVLRLEVLLQKA-MEKEALARASADRVRLRQML---TRAHLT 296
             R K    ++  GE L A    LE  L     ++E  ++   +   L++ L   TR H  
Sbjct: 1191 ARTKAEKQRRDLGEELEALRGELEDTLDSTNAQQELRSKREQEVTELKKTLEEETRIHEA 1250

Query: 297  ----------EPLDEALRKLRMAGRSPSFLEMLGLVRESEAWE--ASLA----------- 333
                      + L E   +L  A R     E   L  E+E  E  A L+           
Sbjct: 1251 AVQELRQRHGQALGELAEQLEQARRGKGAWEKTRLALEAEVSELRAELSSLQTARQEGEQ 1310

Query: 334  --RSVRAQTQE-----GAGARAGAQA---VARASTKVEAVPGGPGREPEGLL-------- 375
              R +  Q QE     G G RA A+A   + RA  ++E V G         +        
Sbjct: 1311 RRRRLELQLQEVQGRAGDGERARAEAAEKLQRAQAELENVSGALNEAESKTIRLSKELSS 1370

Query: 376  -QAGGQEAEELLQE 388
             +A   +A+ELLQE
Sbjct: 1371 TEAQLHDAQELLQE 1384


>gi|145312241 differentially expressed in FDCP 6 homolog [Homo
           sapiens]
          Length = 631

 Score = 34.7 bits (78), Expect = 0.16
 Identities = 47/190 (24%), Positives = 86/190 (45%), Gaps = 14/190 (7%)

Query: 180 EMLHVWQGVSERERRRRLLEGLRGTALQLVHALLAENPARTAQ--DCLAAL-AQVFGDNE 236
           E+L + Q   E+ER+ + LE L+    Q    L  E   R +Q  +   AL  Q+    +
Sbjct: 346 ELLRLQQLQEEKERKLQELELLQEAQRQAERLLQEEEERRRSQHRELQQALEGQLREAEQ 405

Query: 237 SQATIRVKCLTAQQQSGERLSAFVLRLEVL---LQKAMEKEALARASADRVRLRQMLTRA 293
           ++A+++ + +  +++   R    +  LE +   LQ+A++ E  AR   + VR+ Q     
Sbjct: 406 ARASMQAE-MELKEEEAARQRQRIKELEEMQQRLQEALQLEVKARRDEESVRIAQ----T 460

Query: 294 HLTEPLDEALRKL-RMAGRSPSFLEMLGLVRESEAWEASLARSVRAQTQEGAGARAGAQA 352
            L E  +E L++L ++      ++E     +E E  +  +A+  R+  Q         Q 
Sbjct: 461 RLLEEEEEKLKQLMQLKEEQERYIER--AQQEKEELQQEMAQQSRSLQQAQQQLEEVRQN 518

Query: 353 VARASTKVEA 362
             RA   VEA
Sbjct: 519 RQRADEDVEA 528


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.134    0.397 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,114,385
Number of Sequences: 37866
Number of extensions: 674242
Number of successful extensions: 2479
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 2341
Number of HSP's gapped (non-prelim): 157
length of query: 399
length of database: 18,247,518
effective HSP length: 104
effective length of query: 295
effective length of database: 14,309,454
effective search space: 4221288930
effective search space used: 4221288930
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press