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Search of human proteins with 117414156
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|117414156 transcription factor 19 [Homo sapiens]
(345 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|117414152 transcription factor 19 [Homo sapiens] 731 0.0
gi|117414156 transcription factor 19 [Homo sapiens] 731 0.0
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa... 56 4e-08
gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens] 54 2e-07
gi|47132519 Ras association and pleckstrin homology domains 1 is... 46 6e-05
gi|117190342 PHD finger protein 2 [Homo sapiens] 45 1e-04
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 44 2e-04
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 44 2e-04
gi|32698700 PHD finger protein 8 [Homo sapiens] 44 2e-04
gi|33286446 opioid growth factor receptor [Homo sapiens] 43 5e-04
gi|18079216 CASK interacting protein 1 [Homo sapiens] 42 6e-04
gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Ho... 42 6e-04
gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Ho... 42 6e-04
gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Ho... 42 6e-04
gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Hom... 42 6e-04
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho... 42 0.001
gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Ho... 42 0.001
gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Ho... 42 0.001
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 41 0.001
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens] 41 0.001
gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens] 41 0.001
gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens] 41 0.001
gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens] 41 0.001
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 40 0.002
gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens] 40 0.003
gi|90093355 jumonji C domain containing histone demethylase 1 ho... 40 0.004
gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens] 39 0.005
gi|38788260 bromodomain PHD finger transcription factor isoform ... 39 0.005
gi|38788274 bromodomain PHD finger transcription factor isoform ... 39 0.005
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 39 0.007
>gi|117414152 transcription factor 19 [Homo sapiens]
Length = 345
Score = 731 bits (1887), Expect = 0.0
Identities = 345/345 (100%), Positives = 345/345 (100%)
Query: 1 MLPCFQLLRIGGGRGGDLYTFHPPAGAGCTYRLGHRADLCDVALRPQQEPGLISGIHAEL 60
MLPCFQLLRIGGGRGGDLYTFHPPAGAGCTYRLGHRADLCDVALRPQQEPGLISGIHAEL
Sbjct: 1 MLPCFQLLRIGGGRGGDLYTFHPPAGAGCTYRLGHRADLCDVALRPQQEPGLISGIHAEL 60
Query: 61 HAEPRGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGPPGTSPSEFYFM 120
HAEPRGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGPPGTSPSEFYFM
Sbjct: 61 HAEPRGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGPPGTSPSEFYFM 120
Query: 121 FQQVRVKPQDFAAITIPRSRGEARVGAGFRPMLPSQGAPQRPLSTFSPAPKATLILNSIG 180
FQQVRVKPQDFAAITIPRSRGEARVGAGFRPMLPSQGAPQRPLSTFSPAPKATLILNSIG
Sbjct: 121 FQQVRVKPQDFAAITIPRSRGEARVGAGFRPMLPSQGAPQRPLSTFSPAPKATLILNSIG 180
Query: 181 SLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEP 240
SLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEP
Sbjct: 181 SLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEP 240
Query: 241 PENPPPVLMEPRKKLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPCAAPCCCLP 300
PENPPPVLMEPRKKLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPCAAPCCCLP
Sbjct: 241 PENPPPVLMEPRKKLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPCAAPCCCLP 300
Query: 301 QEETVAWVQCDGCDVWFHVACVGCSIQAAREADFRCPGCRAGIQT 345
QEETVAWVQCDGCDVWFHVACVGCSIQAAREADFRCPGCRAGIQT
Sbjct: 301 QEETVAWVQCDGCDVWFHVACVGCSIQAAREADFRCPGCRAGIQT 345
>gi|117414156 transcription factor 19 [Homo sapiens]
Length = 345
Score = 731 bits (1887), Expect = 0.0
Identities = 345/345 (100%), Positives = 345/345 (100%)
Query: 1 MLPCFQLLRIGGGRGGDLYTFHPPAGAGCTYRLGHRADLCDVALRPQQEPGLISGIHAEL 60
MLPCFQLLRIGGGRGGDLYTFHPPAGAGCTYRLGHRADLCDVALRPQQEPGLISGIHAEL
Sbjct: 1 MLPCFQLLRIGGGRGGDLYTFHPPAGAGCTYRLGHRADLCDVALRPQQEPGLISGIHAEL 60
Query: 61 HAEPRGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGPPGTSPSEFYFM 120
HAEPRGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGPPGTSPSEFYFM
Sbjct: 61 HAEPRGDDWRVSLEDHSSQGTLVNNVRLPRGHRLELSDGDLLTFGPEGPPGTSPSEFYFM 120
Query: 121 FQQVRVKPQDFAAITIPRSRGEARVGAGFRPMLPSQGAPQRPLSTFSPAPKATLILNSIG 180
FQQVRVKPQDFAAITIPRSRGEARVGAGFRPMLPSQGAPQRPLSTFSPAPKATLILNSIG
Sbjct: 121 FQQVRVKPQDFAAITIPRSRGEARVGAGFRPMLPSQGAPQRPLSTFSPAPKATLILNSIG 180
Query: 181 SLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEP 240
SLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEP
Sbjct: 181 SLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEP 240
Query: 241 PENPPPVLMEPRKKLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPCAAPCCCLP 300
PENPPPVLMEPRKKLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPCAAPCCCLP
Sbjct: 241 PENPPPVLMEPRKKLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPCAAPCCCLP 300
Query: 301 QEETVAWVQCDGCDVWFHVACVGCSIQAAREADFRCPGCRAGIQT 345
QEETVAWVQCDGCDVWFHVACVGCSIQAAREADFRCPGCRAGIQT
Sbjct: 301 QEETVAWVQCDGCDVWFHVACVGCSIQAAREADFRCPGCRAGIQT 345
>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
sapiens]
Length = 1690
Score = 56.2 bits (134), Expect = 4e-08
Identities = 25/49 (51%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 292 CAAPCCCLPQEETVAWVQCDG-CDVWFHVACVGCSIQAAREADFRCPGC 339
CAA C P ++ V WVQCDG CD WFH CVG S + A D+ C C
Sbjct: 1610 CAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINC 1658
Score = 33.5 bits (75), Expect = 0.29
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 310 CDGCDVWFHVACVGCSIQAAREADFRCPGCRA 341
CDGCD +H C+ + + D+RCP C A
Sbjct: 311 CDGCDDSYHTFCLIPPLPDVPKGDWRCPKCVA 342
Score = 30.4 bits (67), Expect = 2.4
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 11/42 (26%)
Query: 308 VQCDGCDVWFHVACV----------GCSIQAAREADFRCPGC 339
+QC+ C WFH +CV G S Q A+E F CP C
Sbjct: 1175 LQCELCKDWFHNSCVPLPKSSSQKKGSSWQ-AKEVKFLCPLC 1215
>gi|57242796 jumonji, AT rich interactive domain 1B [Homo sapiens]
Length = 1544
Score = 54.3 bits (129), Expect = 2e-07
Identities = 23/49 (46%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 292 CAAPCCCLPQEETVAWVQCDG-CDVWFHVACVGCSIQAAREADFRCPGC 339
C A C P+ + V WVQCDG C+ WFH CVG S + A + D+ C C
Sbjct: 1487 CPAVSCLQPEGDEVDWVQCDGSCNQWFHQVCVGVSPEMAEKEDYICVRC 1535
Score = 34.3 bits (77), Expect = 0.17
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 310 CDGCDVWFHVACVGCSIQAAREADFRCPGCRA 341
CDGCD +H C+ + + D+RCP C A
Sbjct: 327 CDGCDDSYHTFCLIPPLHDVPKGDWRCPKCLA 358
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 45.8 bits (107), Expect = 6e-05
Identities = 42/150 (28%), Positives = 67/150 (44%), Gaps = 22/150 (14%)
Query: 153 LPSQGAPQRPLSTFSPAPKATLILNSIGSLS------------KLRPQ-PLTFSPSWGGP 199
LP Q AP +PL T PAP +T + + + + K +P P ++ P P
Sbjct: 773 LPPQ-APPKPLVTI-PAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPP--SP 828
Query: 200 KSLPVPAPPGEMGTTPS--APPQRNRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRV 257
+ PVP PP + S A P + V V+ ++ + PP PP + +P K +
Sbjct: 829 PTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPTPPAMESQPLKPVPA 888
Query: 258 DKAPLTPTGNR---RGRPRKYPVSAPMAPP 284
+ AP +P + + +P PV +P PP
Sbjct: 889 NVAPQSPPAVKAKPKWQPSSIPVPSPDFPP 918
Score = 30.8 bits (68), Expect = 1.9
Identities = 38/154 (24%), Positives = 61/154 (39%), Gaps = 29/154 (18%)
Query: 146 GAGFRPMLPSQGAPQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSWGGPKSLPVP 205
G+ + P+ AP P + P P L ++ + ++++ P P+ P +P P
Sbjct: 722 GSAMAQLKPAPCAPSLPQFSAPPPP---LKIHQVQHITQVAP------PTPPPPPPIPAP 772
Query: 206 APPGEMGTTPSAPPQ---RNRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDKAPL 262
PP APP+ + + +A + ++ PP PPV P K K P
Sbjct: 773 LPP-------QAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPV--PPAK-----KQPA 818
Query: 263 TPTGNRRGRPRKYPVSAPMAPPAVGGGEP-CAAP 295
P P PV P+ PP + + CA P
Sbjct: 819 FPASYIPPSPPTPPV--PVPPPTLPKQQSFCAKP 850
Score = 28.5 bits (62), Expect = 9.2
Identities = 44/155 (28%), Positives = 51/155 (32%), Gaps = 32/155 (20%)
Query: 153 LPSQGAPQRPLSTFSPAPKATLIL--NSIGSLSKLRPQP-----LTFSPSWGGPKSLPVP 205
+P+ APQ P PA KA +SI S P P L F P P PVP
Sbjct: 886 VPANVAPQSP-----PAVKAKPKWQPSSIPVPSPDFPPPPPESSLVFPP----PPPSPVP 936
Query: 206 APPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEPPENPP-------------PVLMEPR 252
APP T S P ++ +PP P P P
Sbjct: 937 APPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKRPS 996
Query: 253 KKLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVG 287
V K TP G P K + P APP G
Sbjct: 997 VDSLVSK--FTPPA-ESGSPSKETLPPPAAPPKPG 1028
>gi|117190342 PHD finger protein 2 [Homo sapiens]
Length = 1096
Score = 44.7 bits (104), Expect = 1e-04
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 297 CCLPQEETVAWVQCDGCDVWFHVACVGCSIQAAREAD-FRCPGC 339
C LP + T ++CD C WFH +CVG + A + D + CP C
Sbjct: 10 CRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDIDIYHCPNC 53
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 44.3 bits (103), Expect = 2e-04
Identities = 41/143 (28%), Positives = 54/143 (37%), Gaps = 13/143 (9%)
Query: 154 PSQGAPQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGT 213
P G P++P +P P ++G S +R PL+ S + LP P P +
Sbjct: 205 PVPGGPRQPSPGPTPPPFPGNRGTALGGGS-IRQSPLSSSSPFSNRPPLP-PTPSRALDD 262
Query: 214 TPSAPPQR-NRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDKAPLTPTGNRRGRP 272
P PP R S+HR E P N PPV PR P P +R G P
Sbjct: 263 KPPPPPPPVGNRPSIHR---EAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP 319
Query: 273 RKYPVSAPMAPPAVGGGEPCAAP 295
P+ P + G E P
Sbjct: 320 -------PLPPSSSGNDETPRLP 335
Score = 38.1 bits (87), Expect = 0.012
Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 192 FSPSWGGPKSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEP 251
FSP GP PVP+P G PQRNR D S+P PPPV P
Sbjct: 141 FSPP-SGPGRFPVPSPGHRSGPPE---PQRNRMPPPRP-----DVGSKPDSIPPPVPSTP 191
Query: 252 RKKLRVDKAPLTPTGNRRGRP-----RKYPVSAPMAPP-------AVGGGEPCAAP 295
R P+ + + RG P + P P PP A+GGG +P
Sbjct: 192 R--------PIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSP 239
Score = 34.3 bits (77), Expect = 0.17
Identities = 37/136 (27%), Positives = 46/136 (33%), Gaps = 19/136 (13%)
Query: 187 PQPLTFSPSWGGPKSLPVPAPPGEMGTTPSAP-----------PQRNRRKSVHRVLAELD 235
P P T PS ++ P P PP G P P PQRN S
Sbjct: 293 PVPSTPRPS-ASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSP 351
Query: 236 DES-----EPPENPPPVLMEPRKKLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGGGE 290
S P E PPP + +P R P P +R G + + P P G
Sbjct: 352 GRSGPLPPPPSERPPPPVRDPPG--RSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDS 409
Query: 291 PCAAPCCCLPQEETVA 306
P + P LP + A
Sbjct: 410 PRSGPRPPLPPDRPSA 425
Score = 33.1 bits (74), Expect = 0.37
Identities = 38/118 (32%), Positives = 40/118 (33%), Gaps = 18/118 (15%)
Query: 159 PQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGTTPSAP 218
PQR LS S P L S G L P P P PV PPG G P P
Sbjct: 335 PQRNLSLSSSTPP----LPSPGRSGPLPPPPSERPPP-------PVRDPPGRSGPLPPPP 383
Query: 219 PQRNRRKSVHRVL---AELDDES---EPPENPPPVLMEPRKKLRVDKAPLTPTGNRRG 270
P +R S R L +L S P P P L R P T R G
Sbjct: 384 PV-SRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNG 440
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 44.3 bits (103), Expect = 2e-04
Identities = 41/143 (28%), Positives = 54/143 (37%), Gaps = 13/143 (9%)
Query: 154 PSQGAPQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGT 213
P G P++P +P P ++G S +R PL+ S + LP P P +
Sbjct: 205 PVPGGPRQPSPGPTPPPFPGNRGTALGGGS-IRQSPLSSSSPFSNRPPLP-PTPSRALDD 262
Query: 214 TPSAPPQR-NRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDKAPLTPTGNRRGRP 272
P PP R S+HR E P N PPV PR P P +R G P
Sbjct: 263 KPPPPPPPVGNRPSIHR---EAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPSRPGPP 319
Query: 273 RKYPVSAPMAPPAVGGGEPCAAP 295
P+ P + G E P
Sbjct: 320 -------PLPPSSSGNDETPRLP 335
Score = 38.1 bits (87), Expect = 0.012
Identities = 37/116 (31%), Positives = 45/116 (38%), Gaps = 29/116 (25%)
Query: 192 FSPSWGGPKSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEP 251
FSP GP PVP+P G PQRNR D S+P PPPV P
Sbjct: 141 FSPP-SGPGRFPVPSPGHRSGPPE---PQRNRMPPPRP-----DVGSKPDSIPPPVPSTP 191
Query: 252 RKKLRVDKAPLTPTGNRRGRP-----RKYPVSAPMAPP-------AVGGGEPCAAP 295
R P+ + + RG P + P P PP A+GGG +P
Sbjct: 192 R--------PIQSSPHNRGSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSP 239
Score = 34.3 bits (77), Expect = 0.17
Identities = 37/136 (27%), Positives = 46/136 (33%), Gaps = 19/136 (13%)
Query: 187 PQPLTFSPSWGGPKSLPVPAPPGEMGTTPSAP-----------PQRNRRKSVHRVLAELD 235
P P T PS ++ P P PP G P P PQRN S
Sbjct: 293 PVPSTPRPS-ASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSP 351
Query: 236 DES-----EPPENPPPVLMEPRKKLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGGGE 290
S P E PPP + +P R P P +R G + + P P G
Sbjct: 352 GRSGPLPPPPSERPPPPVRDPPG--RSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDS 409
Query: 291 PCAAPCCCLPQEETVA 306
P + P LP + A
Sbjct: 410 PRSGPRPPLPPDRPSA 425
Score = 33.1 bits (74), Expect = 0.37
Identities = 38/118 (32%), Positives = 40/118 (33%), Gaps = 18/118 (15%)
Query: 159 PQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGTTPSAP 218
PQR LS S P L S G L P P P PV PPG G P P
Sbjct: 335 PQRNLSLSSSTPP----LPSPGRSGPLPPPPSERPPP-------PVRDPPGRSGPLPPPP 383
Query: 219 PQRNRRKSVHRVL---AELDDES---EPPENPPPVLMEPRKKLRVDKAPLTPTGNRRG 270
P +R S R L +L S P P P L R P T R G
Sbjct: 384 PV-SRNGSTSRALPATPQLPSRSGVDSPRSGPRPPLPPDRPSAGAPPPPPPSTSIRNG 440
>gi|32698700 PHD finger protein 8 [Homo sapiens]
Length = 1024
Score = 44.3 bits (103), Expect = 2e-04
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 297 CCLPQEETVAWVQCDGCDVWFHVACVGCSIQAAREAD-FRCPGC 339
C LP + T ++CD C WFH +CVG + A + D + CP C
Sbjct: 10 CRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDLYHCPNC 53
>gi|33286446 opioid growth factor receptor [Homo sapiens]
Length = 677
Score = 42.7 bits (99), Expect = 5e-04
Identities = 60/209 (28%), Positives = 76/209 (36%), Gaps = 18/209 (8%)
Query: 96 LSDGDLLTFGPEGPPGTSPSEFYFMFQQVRVKPQDFAAITIPRSRGEARVGAGFRPMLPS 155
LS G L T G + G P E +Q P R R + GAG + S
Sbjct: 419 LSQGSLRT-GTQEVGGQDPGEAVQPCRQ----PLGARVADKVRKRRKVDEGAGDSAAVAS 473
Query: 156 QGAPQRPLSTFSPAP----KATLILNSIGSLSKLRPQPLTFSPSWGGPKSLPVPAPPGEM 211
GA L+ SPAP KA N + ++ R P +P G P P P+P G
Sbjct: 474 GGAQTLALAG-SPAPSGHPKAGHSENGVEEDTEGRTGPKEGTP--GSPSETPGPSPAGPA 530
Query: 212 G----TTPSAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDKAPLTPTGN 267
G +PS P AE E+ P P EP + P +P G
Sbjct: 531 GDEPAESPSETPGPRPAGPAGDEPAESPSETPGPRPAGPAGDEPAESPSETPGP-SPAGP 589
Query: 268 RRGRPRKYPVSAPMAPPA-VGGGEPCAAP 295
R P + P P PA G EP +P
Sbjct: 590 TRDEPAESPSETPGPRPAGPAGDEPAESP 618
>gi|18079216 CASK interacting protein 1 [Homo sapiens]
Length = 1431
Score = 42.4 bits (98), Expect = 6e-04
Identities = 42/142 (29%), Positives = 57/142 (40%), Gaps = 33/142 (23%)
Query: 168 PAPKATLILNSIGSLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGTT------PSAPPQR 221
P P ++ N G++ + RP + GP LP P PP E T P PP+
Sbjct: 1163 PPPPLSVYHNGTGTVRR-RP-----ASEQAGPPELPPPPPPAEPPPTDLAHLPPLPPPEG 1216
Query: 222 NRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLR------VDKAPLTPTGN---RRGRP 272
RK ++PP +P PVL +P KL+ K PL G+ +R
Sbjct: 1217 EARKP-----------AKPPVSPKPVLTQPVPKLQGSPTPTSKKVPLPGPGSPEVKRAHG 1265
Query: 273 RKYPVSAPMAPPAVGGGEPCAA 294
PVS P PP +P A
Sbjct: 1266 TPPPVS-PKPPPPPTAPKPVKA 1286
Score = 30.8 bits (68), Expect = 1.9
Identities = 30/111 (27%), Positives = 41/111 (36%), Gaps = 11/111 (9%)
Query: 203 PVPAPPGEM---GTTPSAPPQRNRRKSVHRVLAELDDESEPPEN----PPPVLMEPRKKL 255
PVP P ++ GT+ PPQ + A P P P L+ P ++
Sbjct: 758 PVPGKPRQVLPPGTSHFTPPQTPTKTRPGSPQALGGPHGPAPATAKVKPTPQLLPPTERP 817
Query: 256 RVDKA-PLTPTGNRRGRPRKYPVSAPMAPPAVGGGEP---CAAPCCCLPQE 302
++ P +PT PV + P A G P A P CLP E
Sbjct: 818 MSPRSLPQSPTHRGFAYVLPQPVEGEVGPAAPGPAPPPVPTAVPTLCLPPE 868
Score = 28.9 bits (63), Expect = 7.0
Identities = 48/184 (26%), Positives = 64/184 (34%), Gaps = 16/184 (8%)
Query: 97 SDGDLLTFGPEGPPGT-SPSEFYFMFQQVRVKPQDFAAITIPRSRGEARVGAGFR----P 151
S +LL GP GP S S+ Y + + A T PR R G + P
Sbjct: 705 SSQELLGDGPPGPSSPMSRSQEYLL-------DEGPAPGTPPREARPGRHGHSIKRASVP 757
Query: 152 MLPSQGAPQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSWGGPKSLPVPAPPGEM 211
+P + P T P T GS L P +P+ K P PP E
Sbjct: 758 PVPGKPRQVLPPGTSHFTPPQTPTKTRPGSPQALGG-PHGPAPATAKVKPTPQLLPPTER 816
Query: 212 GTTPSAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDKAPLTPTGNRR-G 270
+P + PQ + VL + + P P P P V L P + G
Sbjct: 817 PMSPRSLPQSPTHRGFAYVLPQPVEGEVGPAAPGPA--PPPVPTAVPTLCLPPEADAEPG 874
Query: 271 RPRK 274
RP+K
Sbjct: 875 RPKK 878
>gi|68161504 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 42.4 bits (98), Expect = 6e-04
Identities = 58/220 (26%), Positives = 77/220 (35%), Gaps = 27/220 (12%)
Query: 87 RLPRGHRLELSDGDLL------TFGPEGPPGTSPSEFY-FMFQQVRVKPQDFAAITIPRS 139
+L +G L D +LL GP T P + M + F+ ++ +
Sbjct: 206 KLAQGPELAEDDANLLHKHIEVANGPASHFETRPQTYVDHMDGSYSLSALPFSQMSELLT 265
Query: 140 RGEARVGAGFRPMLPSQGAPQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSWGGP 199
R E RV RP P P P P ++S L + RPQ SP+ G
Sbjct: 266 RAEERVLV--RPHEPPPPPPMHGAGDAKPIPTC---ISSATGLIENRPQ----SPATGRT 316
Query: 200 KSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDK 259
P PP PSA S + A + PP PPP P L+
Sbjct: 317 PVFVSPTPPPPPPPLPSA-------LSTSSLRASMTSTPPPPVPPPP--PPPATALQAPA 367
Query: 260 APLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPC--AAPCC 297
P P + +P P+APP V P AAP C
Sbjct: 368 VPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVC 407
>gi|68161502 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 42.4 bits (98), Expect = 6e-04
Identities = 58/220 (26%), Positives = 77/220 (35%), Gaps = 27/220 (12%)
Query: 87 RLPRGHRLELSDGDLL------TFGPEGPPGTSPSEFY-FMFQQVRVKPQDFAAITIPRS 139
+L +G L D +LL GP T P + M + F+ ++ +
Sbjct: 206 KLAQGPELAEDDANLLHKHIEVANGPASHFETRPQTYVDHMDGSYSLSALPFSQMSELLT 265
Query: 140 RGEARVGAGFRPMLPSQGAPQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSWGGP 199
R E RV RP P P P P ++S L + RPQ SP+ G
Sbjct: 266 RAEERVLV--RPHEPPPPPPMHGAGDAKPIPTC---ISSATGLIENRPQ----SPATGRT 316
Query: 200 KSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDK 259
P PP PSA S + A + PP PPP P L+
Sbjct: 317 PVFVSPTPPPPPPPLPSA-------LSTSSLRASMTSTPPPPVPPPP--PPPATALQAPA 367
Query: 260 APLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPC--AAPCC 297
P P + +P P+APP V P AAP C
Sbjct: 368 VPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVC 407
>gi|68161500 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 42.4 bits (98), Expect = 6e-04
Identities = 58/220 (26%), Positives = 77/220 (35%), Gaps = 27/220 (12%)
Query: 87 RLPRGHRLELSDGDLL------TFGPEGPPGTSPSEFY-FMFQQVRVKPQDFAAITIPRS 139
+L +G L D +LL GP T P + M + F+ ++ +
Sbjct: 206 KLAQGPELAEDDANLLHKHIEVANGPASHFETRPQTYVDHMDGSYSLSALPFSQMSELLT 265
Query: 140 RGEARVGAGFRPMLPSQGAPQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSWGGP 199
R E RV RP P P P P ++S L + RPQ SP+ G
Sbjct: 266 RAEERVLV--RPHEPPPPPPMHGAGDAKPIPTC---ISSATGLIENRPQ----SPATGRT 316
Query: 200 KSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDK 259
P PP PSA S + A + PP PPP P L+
Sbjct: 317 PVFVSPTPPPPPPPLPSA-------LSTSSLRASMTSTPPPPVPPPP--PPPATALQAPA 367
Query: 260 APLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPC--AAPCC 297
P P + +P P+APP V P AAP C
Sbjct: 368 VPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVC 407
>gi|4507913 Wiskott-Aldrich syndrome protein family member 1 [Homo
sapiens]
Length = 559
Score = 42.4 bits (98), Expect = 6e-04
Identities = 58/220 (26%), Positives = 77/220 (35%), Gaps = 27/220 (12%)
Query: 87 RLPRGHRLELSDGDLL------TFGPEGPPGTSPSEFY-FMFQQVRVKPQDFAAITIPRS 139
+L +G L D +LL GP T P + M + F+ ++ +
Sbjct: 206 KLAQGPELAEDDANLLHKHIEVANGPASHFETRPQTYVDHMDGSYSLSALPFSQMSELLT 265
Query: 140 RGEARVGAGFRPMLPSQGAPQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSWGGP 199
R E RV RP P P P P ++S L + RPQ SP+ G
Sbjct: 266 RAEERVLV--RPHEPPPPPPMHGAGDAKPIPTC---ISSATGLIENRPQ----SPATGRT 316
Query: 200 KSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDK 259
P PP PSA S + A + PP PPP P L+
Sbjct: 317 PVFVSPTPPPPPPPLPSA-------LSTSSLRASMTSTPPPPVPPPP--PPPATALQAPA 367
Query: 260 APLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPC--AAPCC 297
P P + +P P+APP V P AAP C
Sbjct: 368 VPPPPAPLQIAPGVLHPAPPPIAPPLVQPSPPVARAAPVC 407
>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
sapiens]
Length = 1751
Score = 41.6 bits (96), Expect = 0.001
Identities = 37/132 (28%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 105 GPEGPPGTSPSEFYFMFQQVRVKPQDFAAITIPRSRGEARVGAGFRPMLPSQGAPQRPLS 164
GP GPPG P +F + +++ + D RGE G F LP P P
Sbjct: 1304 GPPGPPGQFPFDFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPRG 1363
Query: 165 -TFSPAPKATLILNSIGSLSKLRPQPLTFS--------------PSWGGP--KSLPVPAP 207
P PK I G P + + PS+ GP +++ VP P
Sbjct: 1364 YPGIPGPKGESIRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGP 1423
Query: 208 PGEMGTTPSAPP 219
PG G P PP
Sbjct: 1424 PGPPG--PPGPP 1433
>gi|110611233 alpha 1 type XVIII collagen isoform 2 precursor [Homo
sapiens]
Length = 1336
Score = 41.6 bits (96), Expect = 0.001
Identities = 37/132 (28%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 105 GPEGPPGTSPSEFYFMFQQVRVKPQDFAAITIPRSRGEARVGAGFRPMLPSQGAPQRPLS 164
GP GPPG P +F + +++ + D RGE G F LP P P
Sbjct: 889 GPPGPPGQFPFDFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPRG 948
Query: 165 -TFSPAPKATLILNSIGSLSKLRPQPLTFS--------------PSWGGP--KSLPVPAP 207
P PK I G P + + PS+ GP +++ VP P
Sbjct: 949 YPGIPGPKGESIRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGP 1008
Query: 208 PGEMGTTPSAPP 219
PG G P PP
Sbjct: 1009 PGPPG--PPGPP 1018
>gi|110611235 alpha 1 type XVIII collagen isoform 1 precursor [Homo
sapiens]
Length = 1516
Score = 41.6 bits (96), Expect = 0.001
Identities = 37/132 (28%), Positives = 49/132 (37%), Gaps = 19/132 (14%)
Query: 105 GPEGPPGTSPSEFYFMFQQVRVKPQDFAAITIPRSRGEARVGAGFRPMLPSQGAPQRPLS 164
GP GPPG P +F + +++ + D RGE G F LP P P
Sbjct: 1069 GPPGPPGQFPFDFLQLEAEMKGEKGDRGDAGQKGERGEPGGGGFFGSSLPGPPGPPGPRG 1128
Query: 165 -TFSPAPKATLILNSIGSLSKLRPQPLTFS--------------PSWGGP--KSLPVPAP 207
P PK I G P + + PS+ GP +++ VP P
Sbjct: 1129 YPGIPGPKGESIRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISVPGP 1188
Query: 208 PGEMGTTPSAPP 219
PG G P PP
Sbjct: 1189 PGPPG--PPGPP 1198
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Query: 284 PAVGGGEPCAAPCCCLPQEETVAWVQCDGCDVWFHVACVGCSIQAAR-----EADFRCPG 338
P G +P A C C + CD C+ WFH CVG S R D+ CP
Sbjct: 259 PECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPN 318
Query: 339 C 339
C
Sbjct: 319 C 319
>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
Length = 1189
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Query: 284 PAVGGGEPCAAPCCCLPQEETVAWVQCDGCDVWFHVACVGCSIQAAR-----EADFRCPG 338
P G +P A C C + CD C+ WFH CVG S R D+ CP
Sbjct: 259 PECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPN 318
Query: 339 C 339
C
Sbjct: 319 C 319
>gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens]
Length = 562
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Query: 284 PAVGGGEPCAAPCCCLPQEETVAWVQCDGCDVWFHVACVGCSIQAAR-----EADFRCPG 338
P G +P A C C + CD C+ WFH CVG S R D+ CP
Sbjct: 259 PECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPN 318
Query: 339 C 339
C
Sbjct: 319 C 319
>gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens]
Length = 562
Score = 41.2 bits (95), Expect = 0.001
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 5/61 (8%)
Query: 284 PAVGGGEPCAAPCCCLPQEETVAWVQCDGCDVWFHVACVGCSIQAAR-----EADFRCPG 338
P G +P A C C + CD C+ WFH CVG S R D+ CP
Sbjct: 259 PECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPN 318
Query: 339 C 339
C
Sbjct: 319 C 319
>gi|32698936 B-cell CLL/lymphoma 9-like [Homo sapiens]
Length = 1499
Score = 41.2 bits (95), Expect = 0.001
Identities = 48/193 (24%), Positives = 67/193 (34%), Gaps = 46/193 (23%)
Query: 105 GPEGPPGTSPSEFYFMFQQVRVKPQDFAAITIPRSRGEARVGAGFRPMLPSQGAPQRPLS 164
G G PG PS+F ++F + AA + + R ++ + Q P+ L
Sbjct: 227 GGGGVPGKPPSQFVYVFT---THLANTAAEAVLQGRADSILA------YHQQNVPRAKLD 277
Query: 165 TFSPAPKATLILNSIGSLSKLRPQPLTFS-PSWGGPKSLPVPAPPGEMGTTPSAPPQRNR 223
P P+PL S PS G P+S P P PP SAPP
Sbjct: 278 QAPKVPPT--------------PEPLPLSTPSAGTPQSQPPPLPPPPPPAPGSAPP---- 319
Query: 224 RKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDKAPLTPTGNRRGRPR-KYPVSAPMA 282
+ PPE PP + + L + TG G P +
Sbjct: 320 --------------ALPPEGPPE---DSSQDLAPNSVGAASTGGGTGGTHPNTPTATTAN 362
Query: 283 PPAVGGGEPCAAP 295
P GG+P +AP
Sbjct: 363 NPLPPGGDPSSAP 375
Score = 33.1 bits (74), Expect = 0.37
Identities = 33/129 (25%), Positives = 45/129 (34%), Gaps = 13/129 (10%)
Query: 151 PMLPSQGAPQRPLSTFSPAPKATLILNSI------GSLSKLR-PQPLTFSPSWGGPKSLP 203
P PSQ P + P ++ +S+ GS S+L+ P SP W
Sbjct: 955 PQTPSQMVPLPSANPPGPLKSPQVLGSSLSVRSPTGSPSRLKSPSMAVPSPGWVASPKTA 1014
Query: 204 VPAPPGEMGTTP-----SAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVD 258
+P+P P S+ N + S PP NPP LM P
Sbjct: 1015 MPSPGVSQNKQPPLNMNSSTTLSNMEQGTLPPSGPRSSSSAPPANPPSGLMNPSLPFTSS 1074
Query: 259 KAPLTPTGN 267
P TP+ N
Sbjct: 1075 PDP-TPSQN 1082
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 40.4 bits (93), Expect = 0.002
Identities = 46/160 (28%), Positives = 66/160 (41%), Gaps = 24/160 (15%)
Query: 153 LPSQGAPQRPLSTFS------PAPKATLILNSIGSLSKLRPQP-LTFSPSWGGPKSLPVP 205
LPS GA Q+P + PAP SL + P P ++F+P P S P+P
Sbjct: 666 LPSLGAYQQPTAAPGLPVGSVPAPACP------PSLQQHFPDPAMSFAPVLP-PPSTPMP 718
Query: 206 APPGEMGTTPSAPPQRNRRKSVHRVLAE---LDDESEPPENPPPVLMEPR-------KKL 255
PG+ PP + + +VLA + + PP PP + + K L
Sbjct: 719 TGPGQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYLAPASQVGAPAQLKPL 778
Query: 256 RVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPCAAP 295
++ +APL P + PV P+ P A G P A P
Sbjct: 779 QMPQAPLQPLAQVPPQMPPIPVVPPITPLAGIDGLPPALP 818
Score = 32.3 bits (72), Expect = 0.64
Identities = 35/122 (28%), Positives = 46/122 (37%), Gaps = 9/122 (7%)
Query: 105 GPEGPPGTSPSEFYFMFQQVRVKPQDFAA-----ITIPRSRGEARVGAGFRPM-LPSQGA 158
GP PPG P+ V PQD AA + P S ++ G P L S+
Sbjct: 1372 GPSNPPGAPPAPLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAGGPGTPQGLTSELE 1431
Query: 159 PQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSWGGPKSLPVPAPPGEMGTTPSAP 218
+PL+ AP A L + L+ P P S P+P PP + S
Sbjct: 1432 TSQPLAETHEAPLAVQPL--VVGLAPCTPAPEAASTRDASAPREPLP-PPAPEPSPHSGT 1488
Query: 219 PQ 220
PQ
Sbjct: 1489 PQ 1490
>gi|5031587 adenomatosis polyposis coli 2 [Homo sapiens]
Length = 2303
Score = 40.0 bits (92), Expect = 0.003
Identities = 44/178 (24%), Positives = 65/178 (36%), Gaps = 18/178 (10%)
Query: 137 PRSRGEARVGAGFRPMLPSQGAPQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSW 196
P RG A V P P+ P++P T P +L + P P
Sbjct: 1751 PEKRGAASVKTSGSPRSPA--GPEKPRGTQKTTPGVPAVLRGRTVIYVPSPAPRAQPKGT 1808
Query: 197 GGPKSLPVPAPPGEMGTTPSAP-----PQRNRRKSVHRVL--AELDDESEPPENPPPVLM 249
GP++ P P + P+AP P + R +S+HR +EL S+PP + P
Sbjct: 1809 PGPRATPRKVAPPCLAQ-PAAPAKVPSPGQQRSRSLHRPAKTSELATLSQPPRSATP--- 1864
Query: 250 EPRKKLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGG-GEPCAAPCCCLPQEETVA 306
R+ K P + + + P P A G P A+P P +A
Sbjct: 1865 ----PARLAKTPSSSSSQTSPASQPLPRKRPPVTQAAGALPGPGASPVPKTPARTLLA 1918
Score = 31.2 bits (69), Expect = 1.4
Identities = 41/166 (24%), Positives = 61/166 (36%), Gaps = 14/166 (8%)
Query: 107 EGPPGTSPSEFYFMFQQVRVKPQDFAAITIPRSRGEARVGAGFRPMLPSQGAPQRPLSTF 166
E PP +P+ + ++ P+ F P+ R EA + P P Q P
Sbjct: 1516 EEPPAAAPTPTH---RRTSAIPRAFTRER-PQGRKEAPAPSKAAPAAPPPARTQ-PSLIA 1570
Query: 167 SPAPKATLILNSIGSLSKLRP-QPLTFSPSWGGPKSLPVPAPPGEMGTTPSAPPQRNRRK 225
P + +S SLS+ P +P P P P P G ++PS R +
Sbjct: 1571 DETPPCYSLSSSASSLSEPEPSEPPAVHPRGREPAVTKDPGPGGGRDSSPS---PRAAEE 1627
Query: 226 SVHRVLAELDDESEPPENPPPVLMEPRKKLRVDKAPLTPTGNRRGR 271
+ R ++ S P PPV R+K R + P R R
Sbjct: 1628 LLQRCIS-----SALPRRRPPVSGLRRRKPRATRLDERPAEGSRER 1668
>gi|90093355 jumonji C domain containing histone demethylase 1
homolog D [Homo sapiens]
Length = 941
Score = 39.7 bits (91), Expect = 0.004
Identities = 23/64 (35%), Positives = 29/64 (45%), Gaps = 10/64 (15%)
Query: 278 SAPMAPPAVGGGEPCAAPCCCL-PQEETVAWVQCDGCDVWFHVACVGCSIQAAREAD-FR 335
SAP PP V C C P + ++CD C WFH +CVG A + D +
Sbjct: 30 SAPPPPPPVY--------CVCRQPYDVNRFMIECDICKDWFHGSCVGVEEHHAVDIDLYH 81
Query: 336 CPGC 339
CP C
Sbjct: 82 CPNC 85
>gi|4507909 Wiskott-Aldrich syndrome protein [Homo sapiens]
Length = 502
Score = 39.3 bits (90), Expect = 0.005
Identities = 37/139 (26%), Positives = 46/139 (33%), Gaps = 24/139 (17%)
Query: 151 PMLPSQGAPQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSWGGPKSLPVPAPPGE 210
P PS+G Q P+ ++ + G L P PL +P P+ P PPG
Sbjct: 316 PPPPSRGGNQ--------LPRPPIVGGNKGRSGPLPPVPLGIAPPPPTPRG---PPPPGR 364
Query: 211 MGTTPSAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDKAPLTPTGNRRG 270
G P PP R + PP PPP P +GN
Sbjct: 365 GGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPP-------------PPPPSSGNGPA 411
Query: 271 RPRKYPVSAPMAPPAVGGG 289
P P P A GGG
Sbjct: 412 PPPLPPALVPAGGLAPGGG 430
Score = 34.3 bits (77), Expect = 0.17
Identities = 28/102 (27%), Positives = 29/102 (28%), Gaps = 17/102 (16%)
Query: 194 PSWGGPKSLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEPRK 253
P GG K P PP +G P P R PP PPP
Sbjct: 330 PIVGGNKGRSGPLPPVPLGIAPPPPTPRGPPPP---------GRGGPPPPPPPATGR--- 377
Query: 254 KLRVDKAPLTPTGNRRGRPRKYPVSAPMAPPAVGGGEPCAAP 295
PL P G P P P PP G P P
Sbjct: 378 -----SGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPP 414
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 39.3 bits (90), Expect = 0.005
Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 26/147 (17%)
Query: 201 SLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDKA 260
++ P PP + P APP + PP PPP ++ L
Sbjct: 2648 AVAAPCPP--VTPAPPAPP------------------APPPSPPPPPAVQHTGLLSTPTL 2687
Query: 261 PLTPTGNRRGRPR----KYPVSAPMAPPAVGGGEPCAAPCCC-LPQEETVAWVQCDGCDV 315
P +R + K ++ + + C C P +E+ ++ CD C
Sbjct: 2688 PAASQKRKREEEKDSSSKSKKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDRCQN 2747
Query: 316 WFHVACVGCSIQAAREAD-FRCPGCRA 341
W+H CVG A D + CP C++
Sbjct: 2748 WYHGRCVGILQSEAELIDEYVCPQCQS 2774
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 39.3 bits (90), Expect = 0.005
Identities = 33/147 (22%), Positives = 53/147 (36%), Gaps = 26/147 (17%)
Query: 201 SLPVPAPPGEMGTTPSAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDKA 260
++ P PP + P APP + PP PPP ++ L
Sbjct: 2665 AVAAPCPP--VTPAPPAPP------------------APPPSPPPPPAVQHTGLLSTPTL 2704
Query: 261 PLTPTGNRRGRPR----KYPVSAPMAPPAVGGGEPCAAPCCC-LPQEETVAWVQCDGCDV 315
P +R + K ++ + + C C P +E+ ++ CD C
Sbjct: 2705 PAASQKRKREEEKDSSSKSKKKKMISTTSKETKKDTKLYCICKTPYDESKFYIGCDRCQN 2764
Query: 316 WFHVACVGCSIQAAREAD-FRCPGCRA 341
W+H CVG A D + CP C++
Sbjct: 2765 WYHGRCVGILQSEAELIDEYVCPQCQS 2791
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 38.9 bits (89), Expect = 0.007
Identities = 46/180 (25%), Positives = 68/180 (37%), Gaps = 19/180 (10%)
Query: 88 LPRGHRLELSDGDLLTFGPEGPPGTSPSEFYFMFQQVRVKPQDFAAITIPRSRGEARVGA 147
LPR HRL + P+ PP P V++K +P+ G V
Sbjct: 964 LPR-HRLSRRVLLEVATAPDPPPRPKP---------VKMKVNRMLQ-PVPKQEGRTVVVV 1012
Query: 148 GFRPMLPSQGAPQRPLSTFSPAPKATLILNSIGSLSKLRPQPLTFSPSWGGPKSLPVPAP 207
P P P RP P P+ + + G + ++ P L S S GP +P P
Sbjct: 1013 N-NPRAPLGPVPVRP----PPGPELSA-QPTPGPVPQVLPASLMVSASPAGPPLIPASRP 1066
Query: 208 PGEMGTTPSAPPQRNRRKSVHRVLAELDDESEPPENPPPVLMEPRKKLRVDKAPLTPTGN 267
PG + P P + + + L L S PP P + ++P V +P P G+
Sbjct: 1067 PGPVLLPPLQPNSGSLPQVLPSPLGVLSGTSRPP--TPTLSLKPTPPAPVRLSPAPPPGS 1124
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.139 0.452
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,914,452
Number of Sequences: 37866
Number of extensions: 1232903
Number of successful extensions: 7731
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 572
Number of HSP's that attempted gapping in prelim test: 6404
Number of HSP's gapped (non-prelim): 1745
length of query: 345
length of database: 18,247,518
effective HSP length: 103
effective length of query: 242
effective length of database: 14,347,320
effective search space: 3472051440
effective search space used: 3472051440
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.