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Search of human proteins with 117414135
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|117414135 apoptosis inhibitor [Homo sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|117414135 apoptosis inhibitor [Homo sapiens] 249 5e-67
gi|4507669 tumor protein, translationally-controlled 1 [Homo sap... 162 8e-41
gi|46409468 hypothetical protein LOC392490 [Homo sapiens] 135 1e-32
gi|169178083 PREDICTED: similar to tumor protein, translationall... 122 7e-29
gi|169179309 PREDICTED: similar to tumor protein, translationall... 122 7e-29
gi|169181065 PREDICTED: similar to tumor protein, translationall... 122 7e-29
gi|239746926 PREDICTED: similar to hCG1793821 [Homo sapiens] 87 3e-18
gi|239757896 PREDICTED: similar to hCG1793821 [Homo sapiens] 85 2e-17
gi|239752409 PREDICTED: similar to hCG1793821 [Homo sapiens] 85 2e-17
gi|164607124 Fanconi anemia, complementation group I isoform 1 [... 31 0.22
gi|82830440 Fanconi anemia, complementation group I isoform 2 [H... 31 0.22
gi|8923040 CDKN2A interacting protein [Homo sapiens] 30 0.38
gi|9966779 eukaryotic translation initiation factor 2B, subunit ... 30 0.50
gi|112789550 poly (ADP-ribose) polymerase family, member 4 [Homo... 30 0.65
gi|203097003 Rho GTPase activating protein 21 [Homo sapiens] 29 0.85
gi|9994179 transcriptional regulator protein [Homo sapiens] 29 1.1
gi|133778961 testis expressed 15 [Homo sapiens] 29 1.1
gi|55742693 zyg-11 homolog B [Homo sapiens] 29 1.1
gi|239752523 PREDICTED: intestinal mucin-like, partial [Homo sap... 28 1.9
gi|55770886 ubiquitin thiolesterase 3 [Homo sapiens] 28 1.9
gi|21735548 centrosomal protein 2 [Homo sapiens] 28 2.5
gi|34147416 breast cancer metastasis-suppressor 1-like [Homo sap... 28 2.5
gi|13569840 MACRO domain containing 1 [Homo sapiens] 27 3.2
gi|153791628 MCF.2 cell line derived transforming sequence isofo... 27 3.2
gi|153791325 MCF.2 cell line derived transforming sequence isofo... 27 3.2
gi|41352705 kinesin family member 3C [Homo sapiens] 27 3.2
gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens] 27 4.2
gi|4507593 tumor necrosis factor (ligand) superfamily, member 10... 27 4.2
gi|171460958 nucleolar protein 10 [Homo sapiens] 27 4.2
gi|208431757 KLRAQ motif containing 1 isoform 3 [Homo sapiens] 27 4.2
>gi|117414135 apoptosis inhibitor [Homo sapiens]
Length = 127
Score = 249 bits (635), Expect = 5e-67
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDI 60
MFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDI
Sbjct: 1 MFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDI 60
Query: 61 VTNHHLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGMKNKSSTSLLIFKTT 120
VTNHHLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGMKNKSSTSLLIFKTT
Sbjct: 61 VTNHHLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGMKNKSSTSLLIFKTT 120
Query: 121 SSLLVKT 127
SSLLVKT
Sbjct: 121 SSLLVKT 127
>gi|4507669 tumor protein, translationally-controlled 1 [Homo
sapiens]
Length = 172
Score = 162 bits (409), Expect = 8e-41
Identities = 84/118 (71%), Positives = 93/118 (78%)
Query: 1 MFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDI 60
MFSDIYKI EI +GLCLEVE KM+S+T GN DDSLIG N+S+E E E TEST+IT VDI
Sbjct: 13 MFSDIYKIREIADGLCLEVEGKMVSRTEGNIDDSLIGGNASAEGPEGEGTESTVITGVDI 72
Query: 61 VTNHHLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGMKNKSSTSLLIFK 118
V NHHLQE+ FTKEAYKKYIKDYMKSI KLEEQRPERVK F+TG + L FK
Sbjct: 73 VMNHHLQETSFTKEAYKKYIKDYMKSIKGKLEEQRPERVKPFMTGAAEQIKHILANFK 130
>gi|46409468 hypothetical protein LOC392490 [Homo sapiens]
Length = 140
Score = 135 bits (339), Expect = 1e-32
Identities = 73/118 (61%), Positives = 85/118 (72%)
Query: 1 MFSDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDI 60
MFSD Y EI +GL LEVE K++S+T GN DSLIG N+S+E E + TEST+IT VD
Sbjct: 18 MFSDSYMSQEIADGLRLEVEGKIVSRTEGNIFDSLIGGNASAEGPEGKGTESTVITGVDS 77
Query: 61 VTNHHLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGMKNKSSTSLLIFK 118
V NHHLQE+ FTKEAY K IKDYMKSI KLEEQRP+RVK F+TG + L FK
Sbjct: 78 VMNHHLQETSFTKEAYNKCIKDYMKSIKGKLEEQRPKRVKPFMTGAAEQIKHILANFK 135
>gi|169178083 PREDICTED: similar to tumor protein,
translationally-controlled 1 [Homo sapiens]
Length = 138
Score = 122 bits (306), Expect = 7e-29
Identities = 63/96 (65%), Positives = 73/96 (76%)
Query: 23 MLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVTNHHLQESIFTKEAYKKYIKD 82
M+S+T GN DDSLIG N S+E E E TEST+IT+VD+V NHHLQE+ FTKEA+KKYIKD
Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
Query: 83 YMKSINEKLEEQRPERVKLFITGMKNKSSTSLLIFK 118
YMKSI KLEE RPERVK F+TG + L FK
Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFK 96
>gi|169179309 PREDICTED: similar to tumor protein,
translationally-controlled 1 [Homo sapiens]
Length = 138
Score = 122 bits (306), Expect = 7e-29
Identities = 63/96 (65%), Positives = 73/96 (76%)
Query: 23 MLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVTNHHLQESIFTKEAYKKYIKD 82
M+S+T GN DDSLIG N S+E E E TEST+IT+VD+V NHHLQE+ FTKEA+KKYIKD
Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
Query: 83 YMKSINEKLEEQRPERVKLFITGMKNKSSTSLLIFK 118
YMKSI KLEE RPERVK F+TG + L FK
Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFK 96
>gi|169181065 PREDICTED: similar to tumor protein,
translationally-controlled 1 [Homo sapiens]
Length = 138
Score = 122 bits (306), Expect = 7e-29
Identities = 63/96 (65%), Positives = 73/96 (76%)
Query: 23 MLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVTNHHLQESIFTKEAYKKYIKD 82
M+S+T GN DDSLIG N S+E E E TEST+IT+VD+V NHHLQE+ FTKEA+KKYIKD
Sbjct: 1 MVSRTEGNIDDSLIGGNVSAEGPEGEGTESTVITAVDVVMNHHLQETSFTKEAHKKYIKD 60
Query: 83 YMKSINEKLEEQRPERVKLFITGMKNKSSTSLLIFK 118
YMKSI KLEE RPERVK F+TG + L FK
Sbjct: 61 YMKSIKGKLEELRPERVKPFMTGAAEQIKHILANFK 96
>gi|239746926 PREDICTED: similar to hCG1793821 [Homo sapiens]
Length = 131
Score = 87.0 bits (214), Expect = 3e-18
Identities = 45/73 (61%), Positives = 58/73 (79%), Gaps = 1/73 (1%)
Query: 3 SDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVT 62
S+IYK EIT G CLEVE K++S+T NTD SLIGRN+S+E E E T+ST+IT VD++
Sbjct: 11 SEIYKNQEITKGPCLEVEGKIVSRTEDNTDGSLIGRNASTEVPEGEETQSTVITGVDVM- 69
Query: 63 NHHLQESIFTKEA 75
++HLQE+ FTKEA
Sbjct: 70 HYHLQETSFTKEA 82
>gi|239757896 PREDICTED: similar to hCG1793821 [Homo sapiens]
Length = 131
Score = 84.7 bits (208), Expect = 2e-17
Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 3 SDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVT 62
S+IYK EIT G CLEVE K++S+T N D SLIGRN+S+E E E T+ST+IT VD++
Sbjct: 11 SEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGEETQSTVITGVDVM- 69
Query: 63 NHHLQESIFTKEA 75
++HLQE+ FTKEA
Sbjct: 70 HYHLQETSFTKEA 82
>gi|239752409 PREDICTED: similar to hCG1793821 [Homo sapiens]
Length = 131
Score = 84.7 bits (208), Expect = 2e-17
Identities = 44/73 (60%), Positives = 57/73 (78%), Gaps = 1/73 (1%)
Query: 3 SDIYKIWEITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVT 62
S+IYK EIT G CLEVE K++S+T N D SLIGRN+S+E E E T+ST+IT VD++
Sbjct: 11 SEIYKNQEITKGPCLEVEGKIVSRTEDNIDGSLIGRNASTEVPEGEETQSTVITGVDVM- 69
Query: 63 NHHLQESIFTKEA 75
++HLQE+ FTKEA
Sbjct: 70 HYHLQETSFTKEA 82
>gi|164607124 Fanconi anemia, complementation group I isoform 1
[Homo sapiens]
Length = 1328
Score = 31.2 bits (69), Expect = 0.22
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 32 DDSLIGRNSSSESTEDEVTESTIITSVDIVTNHHLQESIFTKEAYKKYIKDYMKSINEKL 91
D S S+S ++ + ++ +++ ++ S F+K ++ + +M +KL
Sbjct: 724 DKSADFSQSTSIGIKNNICAFLVMGVCEVLIEYNFSISSFSKNRFEDILSLFM--CYKKL 781
Query: 92 EEQRPERVKLFITGMKNKSSTSLLIFKTTSSLL 124
+ E+ T M NK+S SLL K SSLL
Sbjct: 782 SDILNEKAGKAKTKMANKTSDSLLSMKFVSSLL 814
>gi|82830440 Fanconi anemia, complementation group I isoform 2 [Homo
sapiens]
Length = 1268
Score = 31.2 bits (69), Expect = 0.22
Identities = 24/93 (25%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Query: 32 DDSLIGRNSSSESTEDEVTESTIITSVDIVTNHHLQESIFTKEAYKKYIKDYMKSINEKL 91
D S S+S ++ + ++ +++ ++ S F+K ++ + +M +KL
Sbjct: 724 DKSADFSQSTSIGIKNNICAFLVMGVCEVLIEYNFSISSFSKNRFEDILSLFM--CYKKL 781
Query: 92 EEQRPERVKLFITGMKNKSSTSLLIFKTTSSLL 124
+ E+ T M NK+S SLL K SSLL
Sbjct: 782 SDILNEKAGKAKTKMANKTSDSLLSMKFVSSLL 814
>gi|8923040 CDKN2A interacting protein [Homo sapiens]
Length = 580
Score = 30.4 bits (67), Expect = 0.38
Identities = 22/89 (24%), Positives = 45/89 (50%), Gaps = 7/89 (7%)
Query: 23 MLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVTNHHLQE-------SIFTKEA 75
+ SK+T SL+ SSS+++ V++ST + SV + + + S T ++
Sbjct: 358 LTSKSTSQVAASLLASKSSSQTSGSLVSKSTSLASVSQLASKSSSQTSTSQLPSKSTSQS 417
Query: 76 YKKYIKDYMKSINEKLEEQRPERVKLFIT 104
+ +K K NE +++++P +L+ T
Sbjct: 418 SESSVKFSCKLTNEDVKQKQPFFNRLYKT 446
>gi|9966779 eukaryotic translation initiation factor 2B, subunit 3
gamma [Homo sapiens]
Length = 452
Score = 30.0 bits (66), Expect = 0.50
Identities = 18/83 (21%), Positives = 35/83 (42%)
Query: 10 EITNGLCLEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVTNHHLQES 69
++ LC E + KM DD+ +G S ++ ++ S D++T+ L E
Sbjct: 58 DVQKALCAEFKMKMKPDIVCIPDDADMGTADSLRYIYPKLKTDVLVLSCDLITDVALHEV 117
Query: 70 IFTKEAYKKYIKDYMKSINEKLE 92
+ AY + M+ + +E
Sbjct: 118 VDLFRAYDASLAMLMRKGQDSIE 140
>gi|112789550 poly (ADP-ribose) polymerase family, member 4 [Homo
sapiens]
Length = 1724
Score = 29.6 bits (65), Expect = 0.65
Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 8 IWEITNGLCLEVEQKMLSKTTGNTD-DSLIGRNSSSESTEDEVTESTIITSVDIVTNHHL 66
I ++ G C+++ +K S T DS+ G + ++ T D + ++ TN
Sbjct: 502 ICDVALGKCMDLHEKDFSLTEAPPGYDSVHGVSQTASVTTDFEDDEFVVYK----TNQVK 557
Query: 67 QESIFTKEAYKKYIKDYMKSINEKLEEQRPE 97
+ I IKD+ S + +LEE RPE
Sbjct: 558 MKYIIKFSMPGDQIKDFHPSDHTELEEYRPE 588
>gi|203097003 Rho GTPase activating protein 21 [Homo sapiens]
Length = 1958
Score = 29.3 bits (64), Expect = 0.85
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 41 SSESTEDEVTESTIITSVD----IVTNHHLQE-SIFTKEAYKKYIKDYMKSINEKLEEQR 95
+SE +E TE ++ +S+D + ++H L E +++ ++ D + K E++
Sbjct: 1668 NSEGSELSCTEGSLTSSLDSRRQLFSSHKLIECDTLSRKKSARFKSDSGSLGDAKNEKEA 1727
Query: 96 PERVKLFITGMKNKSSTSLL 115
P K+F K KS+ SLL
Sbjct: 1728 PSLTKVFDVMKKGKSTGSLL 1747
>gi|9994179 transcriptional regulator protein [Homo sapiens]
Length = 308
Score = 28.9 bits (63), Expect = 1.1
Identities = 15/53 (28%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 71 FTKEAYKKYIKDYMKSINEKLEEQRPERVKL-FITGMKNKSSTSLLIFKTTSS 122
+++++Y + + K +KLE+ + ER K+ F+TG K ++T+ TT++
Sbjct: 191 WSEDSYYEALAKAQKIEMDKLEKAKKERTKIEFVTGTKKGTTTNATSTTTTTA 243
>gi|133778961 testis expressed 15 [Homo sapiens]
Length = 2789
Score = 28.9 bits (63), Expect = 1.1
Identities = 27/105 (25%), Positives = 46/105 (43%), Gaps = 26/105 (24%)
Query: 2 FSDIYKIWEITNGLC--LEVEQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVD 59
F+D+ K+ ++T LE+ +K N D++ +TE ++ D
Sbjct: 1998 FADLKKLQDLTLRCTDHLEILKKYFQMLQDNNMDNIF------------ITEENVL---D 2042
Query: 60 IVTNHHLQESIFTKEAYKKYIKDYM---------KSINEKLEEQR 95
+V NH + I EA + YI+ M SI +KL++QR
Sbjct: 2043 VVINHSHEAIILKPEAIEMYIEIVMVSETIHFLKNSIAKKLDKQR 2087
>gi|55742693 zyg-11 homolog B [Homo sapiens]
Length = 744
Score = 28.9 bits (63), Expect = 1.1
Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 14/68 (20%)
Query: 41 SSESTEDEVTESTIITSVDIVTNHHLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVK 100
S E+ E ++ E+ + + + F +EA ++ S+ +E+ +PE +K
Sbjct: 319 SGEANETQIAEAL---------KRYSERAFFVREALF-----HLFSLTHVMEKTKPEILK 364
Query: 101 LFITGMKN 108
L +TGM+N
Sbjct: 365 LVVTGMRN 372
>gi|239752523 PREDICTED: intestinal mucin-like, partial [Homo
sapiens]
Length = 514
Score = 28.1 bits (61), Expect = 1.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Query: 25 SKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVTNH 64
S TT + + NS+ S + ST++ S D++T+H
Sbjct: 64 SMTTMTSPPTTTNSNSTLSSLTSSILSSTLVPSTDMITSH 103
>gi|55770886 ubiquitin thiolesterase 3 [Homo sapiens]
Length = 520
Score = 28.1 bits (61), Expect = 1.9
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 46 EDEVTESTIITSVDIVTNH--HLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFI 103
+D V T + V V H +L+ S FT + +KK ++N KL + +
Sbjct: 99 DDFVVNDTKLGLVQKVREHLQNLENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICA 158
Query: 104 TGMKNKSSTSLL 115
TG++N +T +
Sbjct: 159 TGLRNLGNTCFM 170
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 27.7 bits (60), Expect = 2.5
Identities = 17/58 (29%), Positives = 29/58 (50%)
Query: 65 HLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGMKNKSSTSLLIFKTTSS 122
HLQ+++ E + ++ + + LE+ ER KL M+ + SL I K T+S
Sbjct: 2274 HLQQAVARLEIDRSRLQRHNVQLRSTLEQVERERRKLKREAMRAAQAGSLEISKATAS 2331
>gi|34147416 breast cancer metastasis-suppressor 1-like [Homo
sapiens]
Length = 323
Score = 27.7 bits (60), Expect = 2.5
Identities = 18/89 (20%), Positives = 38/89 (42%)
Query: 20 EQKMLSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVTNHHLQESIFTKEAYKKY 79
E + S +T+ S + + S +DE E + +D ++N Q + + YK+
Sbjct: 24 ENEGSSSEDEDTESSSVSEDGDSSEMDDEDCERRRMECLDEMSNLEKQFTDLKDQLYKER 83
Query: 80 IKDYMKSINEKLEEQRPERVKLFITGMKN 108
+ + E + + PE ++ T +N
Sbjct: 84 LSQVDAKLQEVIAGKAPEYLEPLATLQEN 112
>gi|13569840 MACRO domain containing 1 [Homo sapiens]
Length = 325
Score = 27.3 bits (59), Expect = 3.2
Identities = 22/92 (23%), Positives = 40/92 (43%), Gaps = 2/92 (2%)
Query: 24 LSKTTGNTDDSLIGRNSSSESTEDEVTESTIITSVDIVTNHHLQESIFTKEAYKKYIKDY 83
LS +T + + S + E+ + I T + + + K +Y KD
Sbjct: 89 LSTSTDWKEAKSFLKGLSDKQREEHYFCKDFVRLKKIPTWKEMAKGVAVKVEEPRYKKD- 147
Query: 84 MKSINEKLEEQRPERVKLFITGMKNKSSTSLL 115
K +NEK+ R + KL + + N +++SLL
Sbjct: 148 -KQLNEKISLLRSDITKLEVDAIVNAANSSLL 178
>gi|153791628 MCF.2 cell line derived transforming sequence isoform
a [Homo sapiens]
Length = 985
Score = 27.3 bits (59), Expect = 3.2
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 57 SVDIVTNHHLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGMKNK 109
S+D++ NH L E I T+ Y + + Y + + E PE L ++NK
Sbjct: 551 SLDVLKNHVLNELIQTERVYVREL--YTVLLGYRAEMDNPEMFDLMPPLLRNK 601
>gi|153791325 MCF.2 cell line derived transforming sequence isoform
b [Homo sapiens]
Length = 925
Score = 27.3 bits (59), Expect = 3.2
Identities = 16/53 (30%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 57 SVDIVTNHHLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGMKNK 109
S+D++ NH L E I T+ Y + + Y + + E PE L ++NK
Sbjct: 491 SLDVLKNHVLNELIQTERVYVREL--YTVLLGYRAEMDNPEMFDLMPPLLRNK 541
>gi|41352705 kinesin family member 3C [Homo sapiens]
Length = 793
Score = 27.3 bits (59), Expect = 3.2
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 46 EDEVTESTIITSVDIVTNHHLQESIFTKEAYKKYIKDYMKSINEKLEEQR 95
E V E+ + D N+H + A +K +++Y++ E+LEE++
Sbjct: 423 EGPVIEAWVAEEEDDNNNNHRPPQPILESALEKNMENYLQEQKERLEEEK 472
>gi|224589071 BMS1-like, ribosome assembly protein [Homo sapiens]
Length = 1282
Score = 26.9 bits (58), Expect = 4.2
Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Query: 48 EVTESTIITSVDIVTNHHLQESIFTKEAY----KKYIKDYMKSINEKLEEQRPERVKLF- 102
E E I+ +D ++ H Q+ KE K++ + K EKL+ Q+ R KLF
Sbjct: 1201 EPHERKILALLDALSTVHSQKMKKAKEQRHLHNKEHFRAKQKEEEEKLKRQKDLRKKLFR 1260
Query: 103 ITGMKNK 109
I G K +
Sbjct: 1261 IQGQKER 1267
>gi|4507593 tumor necrosis factor (ligand) superfamily, member 10
[Homo sapiens]
Length = 281
Score = 26.9 bits (58), Expect = 4.2
Identities = 12/41 (29%), Positives = 24/41 (58%)
Query: 72 TKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGMKNKSST 112
T E +++ ++I+ + E+ P+RV ITG + +S+T
Sbjct: 95 TSEETISTVQEKQQNISPLVRERGPQRVAAHITGTRGRSNT 135
>gi|171460958 nucleolar protein 10 [Homo sapiens]
Length = 688
Score = 26.9 bits (58), Expect = 4.2
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
Query: 64 HHLQESIFTKEAYKKYIKDYMKSINEKLEEQRPERVKLFITGMKNKSSTSLLI 116
+H + + AY++Y KD I +K+EE R +RV+L NK LI
Sbjct: 409 YHKVKLMVNPFAYEEYRKD---KIRQKIEETRAQRVQLKKLPKVNKELALKLI 458
>gi|208431757 KLRAQ motif containing 1 isoform 3 [Homo sapiens]
Length = 734
Score = 26.9 bits (58), Expect = 4.2
Identities = 26/85 (30%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
Query: 34 SLIGRNSSSESTEDEVTESTIITSVDIVTNHHLQESIFT-KEAYKKYIK---DYMKSINE 89
+L R + +E +++ +TE + S +I LQ+ + T K +Y+ + D++ S+NE
Sbjct: 652 ALSKRLALAEKSKEALTEEMKLASQNI---SRLQDELTTTKRSYEDQLSMMSDHLCSMNE 708
Query: 90 KLEEQRPE--RVKLFITG--MKNKS 110
L +QR E +K+ G KNKS
Sbjct: 709 TLSKQREEIDTLKMSSKGNSKKNKS 733
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.126 0.331
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,930,014
Number of Sequences: 37866
Number of extensions: 138188
Number of successful extensions: 603
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 578
Number of HSP's gapped (non-prelim): 55
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.