Guide to the Human Genome
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Name: KLRAQ1 Sequence: fasta or formatted (734aa) NCBI GI: 208431757
Description:

KLRAQ motif containing 1 isoform 3

Referenced in:

Centromere Proteins
Coiled-Coil Proteins

Other entries for this name:
alt prot [780aa] KLRAQ motif containing 1 isoform 1
alt prot [769aa] KLRAQ motif containing 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.0         59           3
 C cysteine            1.2          9           1
 D aspartate           4.2         31           1
 E glutamate          10.2         75           3
 F phenylalanine       2.6         19           2
 G glycine             2.6         19           1
 H histidine           2.6         19           1
 I isoleucine          4.2         31           2
 K lysine              8.6         63           3
 L leucine            13.4         98           2
 M methionine          2.3         17           2
 N asparagine          4.0         29           2
 P proline             2.2         16           1
 Q glutamine           6.5         48           2
 R arginine            4.6         34           2
 S serine              9.7         71           3
 T threonine           6.3         46           3
 V valine              4.1         30           2
 W tryptophan          0.1          1           1
 Y tyrosine            2.6         19           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KLRAQ motif containing 1 isoform 3 
KLRAQ1                1.000   KLRAQ motif containing 1 isoform 1 
KLRAQ1                0.979   KLRAQ motif containing 1 isoform 2 
CENPE                 0.030   centromere protein E 
EEA1                  0.028   early endosome antigen 1, 162kD 
MYH1                  0.027   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH7                  0.027   myosin, heavy chain 7, cardiac muscle, beta 
CCDC18                0.027   sarcoma antigen NY-SAR-41 
MYH11                 0.027   smooth muscle myosin heavy chain 11 isoform SM1A [Ho...
MYH11                 0.027   smooth muscle myosin heavy chain 11 isoform SM1B [Ho...
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM2B [Ho...
MYH11                 0.025   smooth muscle myosin heavy chain 11 isoform SM2A [Ho...
MYH2                  0.025   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.025   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH8                  0.025   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH4                  0.025   myosin, heavy polypeptide 4, skeletal muscle 
UACA                  0.025   uveal autoantigen with coiled-coil domains and ankyr...
UACA                  0.025   uveal autoantigen with coiled-coil domains and ankyr...
MYH6                  0.025   myosin heavy chain 6 
CCDC88A               0.025   coiled-coil domain containing 88A isoform 1 
GOLGA4                0.025   golgi autoantigen, golgin subfamily a, 4 
MYH9                  0.024   myosin, heavy polypeptide 9, non-muscle 
ERC2                  0.024   cytomatrix protein p110 
MYH10                 0.023   myosin, heavy polypeptide 10, non-muscle 
MYH15                 0.022   myosin, heavy polypeptide 15 
CEP250                0.022   centrosomal protein 2 
MYH13                 0.022   myosin, heavy polypeptide 13, skeletal muscle [Homo...
CENPF                 0.022   centromere protein F 
MYH3                  0.021   myosin, heavy chain 3, skeletal muscle, embryonic [H...
GCC2                  0.020   GRIP and coiled-coil domain-containing 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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