APOOL 1914

Name: APOOL	Sequence: fasta or formatted (268aa)		NCBI GI: 116812610
Description: apolipoprotein O-like		Referenced in: Lipoproteins
Composition: Amino acid Percentage Count Longest homopolymer A alanine 7.8 21 2 C cysteine 1.1 3 1 D aspartate 2.6 7 1 E glutamate 5.2 14 2 F phenylalanine 2.6 7 1 G glycine 7.1 19 1 H histidine 2.2 6 1 I isoleucine 4.9 13 2 K lysine 11.2 30 2 L leucine 7.5 20 1 M methionine 3.4 9 1 N asparagine 0.7 2 1 P proline 7.1 19 2 Q glutamine 4.5 12 2 R arginine 1.9 5 1 S serine 9.7 26 3 T threonine 7.8 21 2 V valine 7.8 21 1 W tryptophan 0.7 2 1 Y tyrosine 4.1 11 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 apolipoprotein O-like APOO 0.191 apolipoprotein O SGK269 0.020 NKF3 kinase family member BCAS1 0.016 breast carcinoma amplified sequence 1 FAM183B 0.012 hypothetical protein LOC340286 GJA3 0.012 connexin 46 C12orf42 0.012 hypothetical protein LOC374470 C12orf42 0.012 hypothetical protein LOC374470 LOC100292655 0.010 PREDICTED: similar to armadillo repeat containing, ... C2orf71 0.010 hypothetical protein LOC388939 ITGB5 0.008 integrin, beta 5 ANKRD12 0.008 ankyrin repeat domain 12 isoform 2 ANKRD12 0.008 ankyrin repeat domain 12 isoform 1 NEFH 0.008 neurofilament, heavy polypeptide 200kDa ZNF518B 0.008 zinc finger protein 518B DENND4A 0.006 DENN/MADD domain containing 4A isoform 1 DENND4A 0.006 DENN/MADD domain containing 4A isoform 2 COBL 0.006 cordon-bleu homolog ZC3H4 0.006 zinc finger CCCH-type containing 4 AHCTF1 0.006 transcription factor ELYS MECP2 0.006 methyl CpG binding protein 2 isoform 2 MECP2 0.006 methyl CpG binding protein 2 isoform 1 MAP1A 0.006 microtubule-associated protein 1A GNPDA1 0.006 glucosamine-6-phosphate deaminase 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.