Guide to the Human Genome
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Search of human proteins with 239746377

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239746377 PREDICTED: hypothetical protein XP_002343700 [Homo
sapiens]
         (174 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239757402 PREDICTED: hypothetical protein [Homo sapiens]           369   e-103
gi|239751887 PREDICTED: hypothetical protein XP_002348022 [Homo ...   369   e-103
gi|239746377 PREDICTED: hypothetical protein XP_002343700 [Homo ...   369   e-103
gi|169194701 PREDICTED: hypothetical protein [Homo sapiens]            37   0.007
gi|89031838 PREDICTED: hypothetical protein [Homo sapiens]             37   0.007
gi|89030878 PREDICTED: hypothetical protein [Homo sapiens]             37   0.007
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]            35   0.025
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ...    35   0.025
gi|239742272 PREDICTED: hypothetical protein XP_002342469 isofor...    35   0.043
gi|239742270 PREDICTED: hypothetical protein XP_002342468 isofor...    35   0.043
gi|113419909 PREDICTED: hypothetical protein [Homo sapiens]            33   0.095
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]            33   0.16 
gi|169213941 PREDICTED: similar to mCG2980 [Homo sapiens]              32   0.21 
gi|169214360 PREDICTED: similar to mCG2980 isoform 1 [Homo sapiens]    32   0.21 
gi|169213374 PREDICTED: similar to mCG2980 isoform 1 [Homo sapiens]    32   0.21 
gi|51466802 PREDICTED: hypothetical protein [Homo sapiens]             32   0.21 
gi|51466800 PREDICTED: hypothetical protein [Homo sapiens]             32   0.21 
gi|169172766 PREDICTED: hypothetical protein LOC389630 [Homo sap...    32   0.21 
gi|89027843 PREDICTED: hypothetical protein LOC441328 [Homo sapi...    32   0.28 
gi|89027820 PREDICTED: hypothetical protein [Homo sapiens]             32   0.28 
gi|239757014 PREDICTED: hypothetical protein [Homo sapiens]            32   0.36 
gi|169173146 PREDICTED: hypothetical protein [Homo sapiens]            32   0.36 
gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo ...    32   0.36 
gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo ...    32   0.36 
gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]            31   0.47 
gi|38569475 metaxin 1 isoform 1 [Homo sapiens]                         31   0.62 
gi|38569477 metaxin 1 isoform 2 [Homo sapiens]                         31   0.62 
gi|42658817 PREDICTED: hypothetical protein [Homo sapiens]             30   0.81 
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s...    30   0.81 
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s...    30   0.81 

>gi|239757402 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 174

 Score =  369 bits (947), Expect = e-103
 Identities = 174/174 (100%), Positives = 174/174 (100%)

Query: 1   MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE 60
           MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE
Sbjct: 1   MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE 60

Query: 61  AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL 120
           AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL
Sbjct: 61  AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL 120

Query: 121 QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT 174
           QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT
Sbjct: 121 QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT 174


>gi|239751887 PREDICTED: hypothetical protein XP_002348022 [Homo
           sapiens]
          Length = 174

 Score =  369 bits (947), Expect = e-103
 Identities = 174/174 (100%), Positives = 174/174 (100%)

Query: 1   MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE 60
           MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE
Sbjct: 1   MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE 60

Query: 61  AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL 120
           AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL
Sbjct: 61  AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL 120

Query: 121 QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT 174
           QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT
Sbjct: 121 QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT 174


>gi|239746377 PREDICTED: hypothetical protein XP_002343700 [Homo
           sapiens]
          Length = 174

 Score =  369 bits (947), Expect = e-103
 Identities = 174/174 (100%), Positives = 174/174 (100%)

Query: 1   MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE 60
           MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE
Sbjct: 1   MRARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE 60

Query: 61  AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL 120
           AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL
Sbjct: 61  AGTHTGLLGDWRLALLFILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCL 120

Query: 121 QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT 174
           QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT
Sbjct: 121 QPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARLWKVPPRT 174


>gi|169194701 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 139

 Score = 37.4 bits (85), Expect = 0.007
 Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 5/60 (8%)

Query: 2  RARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARL--VQADARGPAPAHTP 59
          RAR P    GHA    P LG  T     RPRP S++  SA  RL   +  ARGPA + +P
Sbjct: 25 RARPPDCSGGHAPSGFPALGLRTAQ---RPRPFSSSPRSASGRLRGPRPVARGPAHSSSP 81


>gi|89031838 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 139

 Score = 37.4 bits (85), Expect = 0.007
 Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 5/60 (8%)

Query: 2  RARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARL--VQADARGPAPAHTP 59
          RAR P    GHA    P LG  T     RPRP S++  SA  RL   +  ARGPA + +P
Sbjct: 25 RARPPDCSGGHAPSGFPALGLRTAQ---RPRPFSSSPRSASGRLRGPRPVARGPAHSSSP 81


>gi|89030878 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 139

 Score = 37.4 bits (85), Expect = 0.007
 Identities = 26/60 (43%), Positives = 31/60 (51%), Gaps = 5/60 (8%)

Query: 2  RARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARL--VQADARGPAPAHTP 59
          RAR P    GHA    P LG  T     RPRP S++  SA  RL   +  ARGPA + +P
Sbjct: 25 RARPPDCSGGHAPSGFPALGLRTAQ---RPRPFSSSPRSASGRLRGPRPVARGPAHSSSP 81


>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 35.4 bits (80), Expect = 0.025
 Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 5/60 (8%)

Query: 119 CLQPASVLRPHIHEVW---SRPHP-RRRTPPTRAC-ALRSHPATSRIHRGAARLWKVPPR 173
           C  PA  L+ H  EVW   S  HP R   PP+R C  L   P+ SR      +L   PPR
Sbjct: 4   CFAPAKFLKRHSKEVWKPSSLIHPARSNQPPSRTCPPLPGPPSRSRSPSSRLKLPADPPR 63


>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
           sapiens]
          Length = 274

 Score = 35.4 bits (80), Expect = 0.025
 Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 5/60 (8%)

Query: 119 CLQPASVLRPHIHEVW---SRPHP-RRRTPPTRAC-ALRSHPATSRIHRGAARLWKVPPR 173
           C  PA  L+ H  EVW   S  HP R   PP+R C  L   P+ SR      +L   PPR
Sbjct: 4   CFAPAKFLKRHSKEVWKPSSLIHPARSNQPPSRTCPPLPGPPSRSRSPSSRLKLPADPPR 63


>gi|239742272 PREDICTED: hypothetical protein XP_002342469 isoform 2
           [Homo sapiens]
          Length = 464

 Score = 34.7 bits (78), Expect = 0.043
 Identities = 46/171 (26%), Positives = 62/171 (36%), Gaps = 35/171 (20%)

Query: 23  STTSPGLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-------- 70
           S+   G R  P +A++T    + +   A+   PA T    P A TH+  LG         
Sbjct: 231 SSPEGGCREVPQAASKTHGLLQAISPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGA 290

Query: 71  ---WRLALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVR 116
               +  +   L+      L PF           L      QPP       P+T+    R
Sbjct: 291 KRPAQAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPEYLQPPPATTELGPSTSPQMGR 350

Query: 117 AYCLQPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
               Q +SV R         PH R   P  +AC +  HPATS  H GA  L
Sbjct: 351 RTPAQVSSVDR-------QPPHSRPCLPTAQACTMSHHPATS--HDGAQPL 392


>gi|239742270 PREDICTED: hypothetical protein XP_002342468 isoform 1
           [Homo sapiens]
          Length = 464

 Score = 34.7 bits (78), Expect = 0.043
 Identities = 46/171 (26%), Positives = 62/171 (36%), Gaps = 35/171 (20%)

Query: 23  STTSPGLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-------- 70
           S+   G R  P +A++T    + +   A+   PA T    P A TH+  LG         
Sbjct: 231 SSPEGGCREVPQAASKTHGLLQAISPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGA 290

Query: 71  ---WRLALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVR 116
               +  +   L+      L PF           L      QPP       P+T+    R
Sbjct: 291 KRPAQAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPEYLQPPPATTELGPSTSPQMGR 350

Query: 117 AYCLQPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
               Q +SV R         PH R   P  +AC +  HPATS  H GA  L
Sbjct: 351 RTPAQVSSVDR-------QPPHSRPCLPTAQACTMSHHPATS--HDGAQPL 392


>gi|113419909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 464

 Score = 33.5 bits (75), Expect = 0.095
 Identities = 46/168 (27%), Positives = 61/168 (36%), Gaps = 29/168 (17%)

Query: 23  STTSPGLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGDWRLALLFI 78
           S+     R  P +A++T    + V+  A+   PA T    P A TH+  LG    + L  
Sbjct: 231 SSPEGSCREVPQAASKTHGLLQAVRTQAQDKRPAVTSQPCPSAATHSLGLG----SNLSF 286

Query: 79  LSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYC---LQP---ASVLRPHIHE 132
            SG       P     N  + P+   F  P +T           LQP   A+ L P    
Sbjct: 287 GSGAKRPAQAPIQACLNFPKKPRLGPFQIPESTIQGGELGAPENLQPPPAATELGPSRSP 346

Query: 133 VWSR-------------PHPRRRTPPTRACALRSHPATSRIHRGAARL 167
              R             PH R   P  +AC +  HPA S  H GA  L
Sbjct: 347 QMGRRTPAQVPSVERQPPHRRPCLPTAQACTMSHHPAAS--HDGAQPL 392


>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 32.7 bits (73), Expect = 0.16
 Identities = 27/71 (38%), Positives = 29/71 (40%), Gaps = 14/71 (19%)

Query: 1   MRARGPAPKQGHAACAH---PPLGDSTTSPGLRPRPLSATRTSAFARLVQADARG----- 52
           + ARG AP      C     PPLG      GLRPRP   T      R +    RG     
Sbjct: 85  LAARGTAPPAPPRQCLPTPCPPLGH-----GLRPRPPPGTPPPRCPRTLAPGPRGLFPAP 139

Query: 53  -PAPAHTPEAG 62
            PAPA T  AG
Sbjct: 140 PPAPARTGPAG 150


>gi|169213941 PREDICTED: similar to mCG2980 [Homo sapiens]
          Length = 307

 Score = 32.3 bits (72), Expect = 0.21
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 5  GPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLV 46
          G AP  G A+ A PP GD+T +P L PRP     T   A +V
Sbjct: 45 GSAPS-GEASGAEPPAGDTTAAP-LAPRPSKEELTRCLAEVV 84


>gi|169214360 PREDICTED: similar to mCG2980 isoform 1 [Homo
          sapiens]
          Length = 307

 Score = 32.3 bits (72), Expect = 0.21
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 5  GPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLV 46
          G AP  G A+ A PP GD+T +P L PRP     T   A +V
Sbjct: 45 GSAPS-GEASGAEPPAGDTTAAP-LAPRPSKEELTRCLAEVV 84


>gi|169213374 PREDICTED: similar to mCG2980 isoform 1 [Homo
          sapiens]
          Length = 307

 Score = 32.3 bits (72), Expect = 0.21
 Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 2/42 (4%)

Query: 5  GPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLV 46
          G AP  G A+ A PP GD+T +P L PRP     T   A +V
Sbjct: 45 GSAPS-GEASGAEPPAGDTTAAP-LAPRPSKEELTRCLAEVV 84


>gi|51466802 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 464

 Score = 32.3 bits (72), Expect = 0.21
 Identities = 45/166 (27%), Positives = 59/166 (35%), Gaps = 35/166 (21%)

Query: 28  GLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-----------WR 72
           G R  P +A++T    +  +  A+   PA T    P A TH+  LG             +
Sbjct: 236 GCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGAKRPAQ 295

Query: 73  LALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVRAYCLQ 121
             +   L+      L PF           L      QPP  A    P+T+    R    Q
Sbjct: 296 APIQACLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPSTSPQMGRRTPAQ 355

Query: 122 PASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
             SV R         PH R   P  +AC +  HPA S  H GA  L
Sbjct: 356 VPSVDR-------QPPHSRPCLPTAQACTMSHHPAAS--HDGAQPL 392


>gi|51466800 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 464

 Score = 32.3 bits (72), Expect = 0.21
 Identities = 45/166 (27%), Positives = 59/166 (35%), Gaps = 35/166 (21%)

Query: 28  GLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-----------WR 72
           G R  P +A++T    +  +  A+   PA T    P A TH+  LG             +
Sbjct: 236 GCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGAKRPAQ 295

Query: 73  LALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVRAYCLQ 121
             +   L+      L PF           L      QPP  A    P+T+    R    Q
Sbjct: 296 APIQACLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPSTSPQMGRRTPAQ 355

Query: 122 PASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
             SV R         PH R   P  +AC +  HPA S  H GA  L
Sbjct: 356 VPSVDR-------QPPHSRPCLPTAQACTMSHHPAAS--HDGAQPL 392


>gi|169172766 PREDICTED: hypothetical protein LOC389630 [Homo
           sapiens]
          Length = 464

 Score = 32.3 bits (72), Expect = 0.21
 Identities = 45/166 (27%), Positives = 59/166 (35%), Gaps = 35/166 (21%)

Query: 28  GLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-----------WR 72
           G R  P +A++T    +  +  A+   PA T    P A TH+  LG             +
Sbjct: 236 GCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGAKRPAQ 295

Query: 73  LALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVRAYCLQ 121
             +   L+      L PF           L      QPP  A    P+T+    R    Q
Sbjct: 296 APIQACLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPSTSPQMGRRTPAQ 355

Query: 122 PASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
             SV R         PH R   P  +AC +  HPA S  H GA  L
Sbjct: 356 VPSVDR-------QPPHSRPCLPTAQACTMSHHPAAS--HDGAQPL 392


>gi|89027843 PREDICTED: hypothetical protein LOC441328 [Homo
           sapiens]
          Length = 464

 Score = 32.0 bits (71), Expect = 0.28
 Identities = 44/171 (25%), Positives = 59/171 (34%), Gaps = 35/171 (20%)

Query: 23  STTSPGLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-------- 70
           S+   G R  P +A++T    +  +  A+   PA T    P A TH+  LG         
Sbjct: 231 SSPEGGCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGA 290

Query: 71  ---WRLALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVR 116
               +  +   L+      L PF           L      QPP  A    P+T+    R
Sbjct: 291 KRPAQAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPSTSPQMGR 350

Query: 117 AYCLQPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
               Q  SV        W  PH     P  +AC +  HPA    H GA  L
Sbjct: 351 RTPAQVPSV-------DWQPPHSTPCLPTAQACTMSHHPAAG--HDGAQPL 392


>gi|89027820 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 464

 Score = 32.0 bits (71), Expect = 0.28
 Identities = 25/70 (35%), Positives = 29/70 (41%), Gaps = 9/70 (12%)

Query: 98  QPPQFAAFPAPTTTRSRVRAYCLQPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPAT 157
           QPP  A    P+T+    R    Q  SV R         PH R   P  +AC +  HPA 
Sbjct: 332 QPPPAATELGPSTSPQMGRRTPAQVPSVDR-------QPPHSRPCLPTAQACTMSHHPAA 384

Query: 158 SRIHRGAARL 167
           S  H GA  L
Sbjct: 385 S--HDGAQPL 392


>gi|239757014 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 281

 Score = 31.6 bits (70), Expect = 0.36
 Identities = 48/169 (28%), Positives = 62/169 (36%), Gaps = 35/169 (20%)

Query: 15  CAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPEAGTHTGLLGDWRLA 74
           C HPP+     +PG+R  P  A  T+    LV   +  PA      AG   G       +
Sbjct: 88  CKHPPVFQCAVNPGIRAVP--AMDTALLPPLVFFASLSPA------AGIRLG------CS 133

Query: 75  LLFILSGDHVWTLRPFLELFNQTQPPQ--FAA-----FPAPTTTRSRVRAYCLQPASVLR 127
              +L  DH+   RP     +    P   F+A      PA    R R RA C +  SV+ 
Sbjct: 134 PSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRERALCGRCCSVVV 193

Query: 128 PHIHEVWSRPHPRRRTPPTRACALR-------------SHPATS-RIHR 162
                   R   R R P +   ALR             S PA S R+HR
Sbjct: 194 AVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHR 242


>gi|169173146 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 464

 Score = 31.6 bits (70), Expect = 0.36
 Identities = 45/168 (26%), Positives = 60/168 (35%), Gaps = 29/168 (17%)

Query: 23  STTSPGLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGDWRLALLFI 78
           S+     R  P +A++T    + V+  A+   PA T    P A TH+  LG    + L  
Sbjct: 231 SSPEGSCREVPQAASKTHGLLQAVRTQAQDKRPAVTSQPCPSAATHSLGLG----SNLSF 286

Query: 79  LSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYC---LQP---ASVLRPHIHE 132
             G       P     N  + P+   F  P +T           LQP   A+ L P    
Sbjct: 287 GPGAKRPAQAPIQACLNFPKKPRLGPFQIPESTIQGGELGAPENLQPPPAATELGPSRSP 346

Query: 133 VWSR-------------PHPRRRTPPTRACALRSHPATSRIHRGAARL 167
              R             PH R   P  +AC +  HPA S  H GA  L
Sbjct: 347 QMGRRTPAQVPSVERQPPHRRPCLPTAQACTMSHHPAAS--HDGAQPL 392


>gi|239747122 PREDICTED: hypothetical protein XP_002343916 [Homo
           sapiens]
          Length = 598

 Score = 31.6 bits (70), Expect = 0.36
 Identities = 48/169 (28%), Positives = 62/169 (36%), Gaps = 35/169 (20%)

Query: 15  CAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPEAGTHTGLLGDWRLA 74
           C HPP+     +PG+R  P  A  T+    LV   +  PA      AG   G       +
Sbjct: 405 CKHPPVFQCAVNPGIRAVP--AMDTALLPPLVFFASLSPA------AGIRLG------CS 450

Query: 75  LLFILSGDHVWTLRPFLELFNQTQPPQ--FAA-----FPAPTTTRSRVRAYCLQPASVLR 127
              +L  DH+   RP     +    P   F+A      PA    R R RA C +  SV+ 
Sbjct: 451 PSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRERALCGRCCSVVV 510

Query: 128 PHIHEVWSRPHPRRRTPPTRACALR-------------SHPATS-RIHR 162
                   R   R R P +   ALR             S PA S R+HR
Sbjct: 511 AVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHR 559


>gi|239746558 PREDICTED: hypothetical protein XP_002343788 [Homo
           sapiens]
          Length = 616

 Score = 31.6 bits (70), Expect = 0.36
 Identities = 48/169 (28%), Positives = 62/169 (36%), Gaps = 35/169 (20%)

Query: 15  CAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPEAGTHTGLLGDWRLA 74
           C HPP+     +PG+R  P  A  T+    LV   +  PA      AG   G       +
Sbjct: 423 CKHPPVFQCAVNPGIRAVP--AMDTALLPPLVFFASLSPA------AGIRLG------CS 468

Query: 75  LLFILSGDHVWTLRPFLELFNQTQPPQ--FAA-----FPAPTTTRSRVRAYCLQPASVLR 127
              +L  DH+   RP     +    P   F+A      PA    R R RA C +  SV+ 
Sbjct: 469 PSHLLGRDHLSRPRPRPTRGDPPPSPDTGFSARACERVPARRPARRRERALCGRCCSVVV 528

Query: 128 PHIHEVWSRPHPRRRTPPTRACALR-------------SHPATS-RIHR 162
                   R   R R P +   ALR             S PA S R+HR
Sbjct: 529 AVRRRRRRRSSSRTRLPSSSGAALRRPWQGAWEVSVRPSLPAVSVRVHR 577


>gi|113416879 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 175

 Score = 31.2 bits (69), Expect = 0.47
 Identities = 41/130 (31%), Positives = 50/130 (38%), Gaps = 13/130 (10%)

Query: 27  PGLRPRPLSATRTSAFARLVQADARGPAPAHTPEAGTHTGLLGDWRLALLFILSGDHVWT 86
           PG R  P  A RT   +      AR P+PA    AG   GL G W  A     + +    
Sbjct: 52  PGNRHPPPPAARTHPGS----CRARCPSPA----AG---GLRGPWTAAPGRQRADEGAAA 100

Query: 87  LRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCLQPASVLRPHIHEVWSRPHPRRRTPPT 146
            RP  +     + P  AA PAP   R  +R     P    RP +        P    PP+
Sbjct: 101 ARPERQRVWARRLPGSAAAPAPG--RDALRLPPPPPPPPERPRLPPAGLAGGPADSAPPS 158

Query: 147 RACALRSHPA 156
            A A RS PA
Sbjct: 159 PAPAPRSRPA 168


>gi|38569475 metaxin 1 isoform 1 [Homo sapiens]
          Length = 466

 Score = 30.8 bits (68), Expect = 0.62
 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 6/55 (10%)

Query: 3   ARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAH 57
           ARGP P+   A+ A      S  SPG+ P PL+AT   A A       +G A AH
Sbjct: 90  ARGPVPRSSAASRAR----RSLASPGISPGPLTATIGGAVAG--GGPRQGRAEAH 138


>gi|38569477 metaxin 1 isoform 2 [Homo sapiens]
          Length = 435

 Score = 30.8 bits (68), Expect = 0.62
 Identities = 22/55 (40%), Positives = 27/55 (49%), Gaps = 6/55 (10%)

Query: 3   ARGPAPKQGHAACAHPPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAH 57
           ARGP P+   A+ A      S  SPG+ P PL+AT   A A       +G A AH
Sbjct: 90  ARGPVPRSSAASRAR----RSLASPGISPGPLTATIGGAVAG--GGPRQGRAEAH 138


>gi|42658817 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 464

 Score = 30.4 bits (67), Expect = 0.81
 Identities = 45/171 (26%), Positives = 60/171 (35%), Gaps = 35/171 (20%)

Query: 23  STTSPGLRPRPLSATRTSAFARLVQADARGPAPAHT----PEAGTHTGLLGD-------- 70
           S+   G R  P +A++T    +  +  A+   PA T    P A TH+  LG         
Sbjct: 231 SSPEGGCREVPQAASKTHGLLQAARPQAQDKRPAVTSQPCPPAATHSLGLGSNLSFGPGA 290

Query: 71  ---WRLALLFILSGDHVWTLRPF-----------LELFNQTQPPQFAAFPAPTTTRSRVR 116
               +  +   L+      L PF           L      QPP  A    P+T+    R
Sbjct: 291 KRPAQAPIQACLNFPKKPRLGPFQIPESAIQGGELGAPENLQPPPAATELGPSTSPQMGR 350

Query: 117 AYCLQPASVLRPHIHEVWSRPHPRRRTPPTRACALRSHPATSRIHRGAARL 167
               Q  SV R         PH R   P  +AC +  H A S  H GA  L
Sbjct: 351 RTPAQVPSVER-------QPPHSRPCLPTAQACTMSHHSAAS--HDGAQPL 392


>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
            sapiens]
          Length = 1858

 Score = 30.4 bits (67), Expect = 0.81
 Identities = 30/113 (26%), Positives = 39/113 (34%), Gaps = 38/113 (33%)

Query: 18   PPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE-AGTHTGLLGDWRLALL 76
            PPL  S+  P + P P  AT  +           GP P H P   G H  L         
Sbjct: 1747 PPLFPSSAHPTVPPYPSQATHHTTL---------GPGPQHQPSGTGPHCPL--------- 1788

Query: 77   FILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCLQPASVLRPH 129
              ++G H+             QP    + P PT +      +C  P SV  PH
Sbjct: 1789 -PVTGPHL-------------QPQGPNSIPTPTAS-----GFCPHPGSVALPH 1822


>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
            sapiens]
          Length = 1858

 Score = 30.4 bits (67), Expect = 0.81
 Identities = 30/113 (26%), Positives = 39/113 (34%), Gaps = 38/113 (33%)

Query: 18   PPLGDSTTSPGLRPRPLSATRTSAFARLVQADARGPAPAHTPE-AGTHTGLLGDWRLALL 76
            PPL  S+  P + P P  AT  +           GP P H P   G H  L         
Sbjct: 1747 PPLFPSSAHPTVPPYPSQATHHTTL---------GPGPQHQPSGTGPHCPL--------- 1788

Query: 77   FILSGDHVWTLRPFLELFNQTQPPQFAAFPAPTTTRSRVRAYCLQPASVLRPH 129
              ++G H+             QP    + P PT +      +C  P SV  PH
Sbjct: 1789 -PVTGPHL-------------QPQGPNSIPTPTAS-----GFCPHPGSVALPH 1822


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.134    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,282,794
Number of Sequences: 37866
Number of extensions: 498567
Number of successful extensions: 1877
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 86
Number of HSP's that attempted gapping in prelim test: 1810
Number of HSP's gapped (non-prelim): 148
length of query: 174
length of database: 18,247,518
effective HSP length: 95
effective length of query: 79
effective length of database: 14,650,248
effective search space: 1157369592
effective search space used: 1157369592
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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