Search of human proteins with 239745983

Search of human proteins with 239745983

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745983 PREDICTED: similar to Rho-associated, coiled-coil
containing protein kinase 1 [Homo sapiens]
         (118 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239745983 PREDICTED: similar to Rho-associated, coiled-coil c...   261   8e-71
gi|4885583 Rho-associated, coiled-coil containing protein kinase...   255   5e-69
gi|239752561 PREDICTED: similar to Rho-associated, coiled-coil c...   255   5e-69
gi|41872583 Rho-associated, coiled-coil containing protein kinas...   182   4e-47
gi|47157325 protein kinase C, delta [Homo sapiens]                     32   0.11 
gi|31377782 protein kinase C, delta [Homo sapiens]                     32   0.11 
gi|194272142 myosin IXB isoform 2 [Homo sapiens]                       32   0.11 
gi|33356170 myosin IXB isoform 1 [Homo sapiens]                        32   0.11 
gi|156119615 myosin IXA [Homo sapiens]                                 32   0.14 
gi|190684646 RAS guanyl releasing protein 1 isoform b [Homo sapi...    32   0.14 
gi|190684644 RAS guanyl releasing protein 1 isoform a [Homo sapi...    32   0.14 
gi|110349759 NSL1, MIND kinetochore complex component isoform 1 ...    30   0.31 
gi|28557781 protein kinase C, eta [Homo sapiens]                       30   0.41 
gi|148539879 beta-adrenergic receptor kinase 2 [Homo sapiens]          28   1.2  
gi|4502193 v-raf murine sarcoma 3611 viral oncogene homolog [Hom...    28   1.5  
gi|86793109 complement receptor 1 isoform S precursor [Homo sapi...    28   2.0  
gi|86793036 complement receptor 1 isoform F precursor [Homo sapi...    28   2.0  
gi|26051258 RAS guanyl releasing protein 4 isoform a [Homo sapiens]    28   2.0  
gi|226246586 RAS guanyl releasing protein 4 isoform g [Homo sapi...    28   2.0  
gi|226246584 RAS guanyl releasing protein 4 isoform f [Homo sapi...    28   2.0  
gi|226246581 RAS guanyl releasing protein 4 isoform e [Homo sapi...    28   2.0  
gi|226246579 RAS guanyl releasing protein 4 isoform d [Homo sapi...    28   2.0  
gi|226246577 RAS guanyl releasing protein 4 isoform c [Homo sapi...    28   2.0  
gi|226246575 RAS guanyl releasing protein 4 isoform b [Homo sapi...    28   2.0  
gi|213385270 RAS guanyl releasing protein 3 (calcium and DAG-reg...    28   2.0  
gi|24762239 RAS guanyl releasing protein 3 (calcium and DAG-regu...    28   2.0  
gi|7662334 RAS guanyl releasing protein 3 (calcium and DAG-regul...    28   2.0  
gi|120659787 protein kinase D2 isoform B [Homo sapiens]                27   2.6  
gi|120659785 protein kinase D2 isoform A [Homo sapiens]                27   2.6  
gi|120659782 protein kinase D2 isoform A [Homo sapiens]                27   2.6  

>gi|239745983 PREDICTED: similar to Rho-associated, coiled-coil
           containing protein kinase 1 [Homo sapiens]
          Length = 118

 Score =  261 bits (667), Expect = 8e-71
 Identities = 118/118 (100%), Positives = 118/118 (100%)

Query: 1   MEPVQEAEKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRD 60
           MEPVQEAEKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRD
Sbjct: 1   MEPVQEAEKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRD 60

Query: 61  HLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASP 118
           HLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASP
Sbjct: 61  HLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASP 118


>gi|4885583 Rho-associated, coiled-coil containing protein kinase 1
            [Homo sapiens]
          Length = 1354

 Score =  255 bits (652), Expect = 5e-69
 Identities = 115/118 (97%), Positives = 117/118 (99%)

Query: 1    MEPVQEAEKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRD 60
            MEPVQ+AEKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALEC+R HVKCHRD
Sbjct: 1212 MEPVQQAEKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECRRCHVKCHRD 1271

Query: 61   HLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASP 118
            HLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASP
Sbjct: 1272 HLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASP 1329


>gi|239752561 PREDICTED: similar to Rho-associated, coiled-coil
           containing protein kinase 1 [Homo sapiens]
          Length = 143

 Score =  255 bits (652), Expect = 5e-69
 Identities = 115/118 (97%), Positives = 117/118 (99%)

Query: 1   MEPVQEAEKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRD 60
           MEPVQ+AEKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALEC+R HVKCHRD
Sbjct: 1   MEPVQQAEKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECRRCHVKCHRD 60

Query: 61  HLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASP 118
           HLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASP
Sbjct: 61  HLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPSGFVRASP 118


>gi|41872583 Rho-associated, coiled-coil containing protein kinase 2
            [Homo sapiens]
          Length = 1388

 Score =  182 bits (463), Expect = 4e-47
 Identities = 80/120 (66%), Positives = 102/120 (85%), Gaps = 4/120 (3%)

Query: 1    MEPVQEAEKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRD 60
            +EPV   EK+N+  HKGHEFIPTLYHFP NC+AC KPLWH+FKPPPALEC+R H+KCH+D
Sbjct: 1246 VEPV--GEKSNYICHKGHEFIPTLYHFPTNCEACMKPLWHMFKPPPALECRRCHIKCHKD 1303

Query: 61   HLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPKNPPS--GFVRASP 118
            H+DKKE++I PCKV YD+++A+++LLLA S +EQ+KWV+ LVKKIPK PP+   F R+SP
Sbjct: 1304 HMDKKEEIIAPCKVYYDISTAKNLLLLANSTEEQQKWVSRLVKKIPKKPPAPDPFARSSP 1363


>gi|47157325 protein kinase C, delta [Homo sapiens]
          Length = 676

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 16  KGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDK 64
           K HEFI T +  P  C  C   +W + K     +C++ +   H+  +DK
Sbjct: 157 KNHEFIATFFGQPTFCSVCKDFVWGLNK--QGYKCRQCNAAIHKKCIDK 203



 Score = 27.3 bits (59), Expect = 2.6
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 8   EKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDKKED 67
           +K  F     H F    Y  P  CD C   LW + K    L+C+   +  H    +K  +
Sbjct: 221 QKERFNIDMPHRFKVHNYMSPTFCDHCGSLLWGLVK--QGLKCEDCGMNVHHKCREKVAN 278

Query: 68  L 68
           L
Sbjct: 279 L 279


>gi|31377782 protein kinase C, delta [Homo sapiens]
          Length = 676

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 2/49 (4%)

Query: 16  KGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDK 64
           K HEFI T +  P  C  C   +W + K     +C++ +   H+  +DK
Sbjct: 157 KNHEFIATFFGQPTFCSVCKDFVWGLNK--QGYKCRQCNAAIHKKCIDK 203



 Score = 27.3 bits (59), Expect = 2.6
 Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 2/61 (3%)

Query: 8   EKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDKKED 67
           +K  F     H F    Y  P  CD C   LW + K    L+C+   +  H    +K  +
Sbjct: 221 QKERFNIDMPHRFKVHNYMSPTFCDHCGSLLWGLVK--QGLKCEDCGMNVHHKCREKVAN 278

Query: 68  L 68
           L
Sbjct: 279 L 279


>gi|194272142 myosin IXB isoform 2 [Homo sapiens]
          Length = 2022

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 3/52 (5%)

Query: 13   QNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDK 64
            Q H GH F       P +C+ C   +W + K   AL C    + CH+  + K
Sbjct: 1628 QEHNGHVFASYQVSIPQSCEQCLSYIWLMDK---ALLCSVCKMTCHKKCVHK 1676


>gi|33356170 myosin IXB isoform 1 [Homo sapiens]
          Length = 2157

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 16/52 (30%), Positives = 23/52 (44%), Gaps = 3/52 (5%)

Query: 13   QNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDK 64
            Q H GH F       P +C+ C   +W + K   AL C    + CH+  + K
Sbjct: 1628 QEHNGHVFASYQVSIPQSCEQCLSYIWLMDK---ALLCSVCKMTCHKKCVHK 1676


>gi|156119615 myosin IXA [Homo sapiens]
          Length = 2548

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 3/47 (6%)

Query: 13   QNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHR 59
            + H GH F  T Y  P  C+ C+  +W + +   A  C+     CH+
Sbjct: 1995 EEHNGHIFKATQYSIPTYCEYCSSLIWIMDR---ASVCKLCKYACHK 2038


>gi|190684646 RAS guanyl releasing protein 1 isoform b [Homo
           sapiens]
          Length = 762

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLD 63
           H F  T Y  P  CD CA  LW V K      C+   + CH+   D
Sbjct: 507 HNFQETTYLKPTFCDNCAGFLWGVIK--QGYRCKDCGMNCHKQCKD 550


>gi|190684644 RAS guanyl releasing protein 1 isoform a [Homo
           sapiens]
          Length = 797

 Score = 31.6 bits (70), Expect = 0.14
 Identities = 17/46 (36%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLD 63
           H F  T Y  P  CD CA  LW V K      C+   + CH+   D
Sbjct: 542 HNFQETTYLKPTFCDNCAGFLWGVIK--QGYRCKDCGMNCHKQCKD 585


>gi|110349759 NSL1, MIND kinetochore complex component isoform 1
           [Homo sapiens]
          Length = 281

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 16/63 (25%), Positives = 29/63 (46%)

Query: 44  PPPALECQRRHVKCHRDHLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVK 103
           P   LEC  + +K  ++ L +   ++ P  + YD   A  M  L C  +   K ++  +K
Sbjct: 130 PRKILECVIKTIKAKQEILKQYHPVVHPLDLKYDPDPAPHMENLKCRGETVAKEISEAMK 189

Query: 104 KIP 106
            +P
Sbjct: 190 SLP 192


>gi|28557781 protein kinase C, eta [Homo sapiens]
          Length = 683

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 5/58 (8%)

Query: 5   QEAEKTNFQNHKGHEFIPTLYHFPANCDACAKPLWHVFKPPPALECQ----RRHVKCH 58
           Q A +       GH+F+ T    P  C  C + +W VF      +CQ      H +CH
Sbjct: 159 QRAMRRRVHQINGHKFMATYLRQPTYCSHCREFIWGVF-GKQGYQCQVCTCVVHKRCH 215



 Score = 26.6 bits (57), Expect = 4.5
 Identities = 13/44 (29%), Positives = 20/44 (45%), Gaps = 6/44 (13%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQ----RRHVKC 57
           H+F    Y  P  CD C   LW + +    L+C+      H++C
Sbjct: 246 HKFSIHNYKVPTFCDHCGSLLWGIMR--QGLQCKICKMNVHIRC 287


>gi|148539879 beta-adrenergic receptor kinase 2 [Homo sapiens]
          Length = 688

 Score = 28.5 bits (62), Expect = 1.2
 Identities = 15/48 (31%), Positives = 25/48 (52%), Gaps = 2/48 (4%)

Query: 60  DHLDKKEDLICPCKVSYDVTSARDMLLLACSQDEQKKWVTHLVKKIPK 107
           + LD +ED +C  +  YD    ++  LL+CS    K+ V H+   + K
Sbjct: 93  EKLDNEEDRLCRSRQIYDAYIMKE--LLSCSHPFSKQAVEHVQSHLSK 138


>gi|4502193 v-raf murine sarcoma 3611 viral oncogene homolog [Homo
           sapiens]
          Length = 606

 Score = 28.1 bits (61), Expect = 1.5
 Identities = 17/53 (32%), Positives = 23/53 (43%), Gaps = 7/53 (13%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDKKEDLIC 70
           H F+   +   A CD C K L+H F+      CQ    K H+ H   K   +C
Sbjct: 99  HNFVRKTFFSLAFCDFCLKFLFHGFR------CQTCGYKFHQ-HCSSKVPTVC 144


>gi|86793109 complement receptor 1 isoform S precursor [Homo sapiens]
          Length = 2489

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 41   VFKPPPALECQRRHVKCHRDHLDKKEDLICPCKVSYDVTSARDM 84
            V +PPP +     H   H+D+    +++   C+ SYD+  A  +
Sbjct: 2099 VCQPPPEI-LHGEHTLSHQDNFSPGQEVFYSCEPSYDLRGAASL 2141



 Score = 26.6 bits (57), Expect = 4.5
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 41   VFKPPPALECQRRHVKCHRDHLDKKEDLICPCKVSYDVTSARDM 84
            V +PPP +     H   H+D+    +++   C+  YD+  A  +
Sbjct: 1646 VCQPPPEI-LHGEHTPSHQDNFSPGQEVFYSCEPGYDLRGAASL 1688


>gi|86793036 complement receptor 1 isoform F precursor [Homo sapiens]
          Length = 2039

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 12/44 (27%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 41   VFKPPPALECQRRHVKCHRDHLDKKEDLICPCKVSYDVTSARDM 84
            V +PPP +     H   H+D+    +++   C+ SYD+  A  +
Sbjct: 1649 VCQPPPEI-LHGEHTLSHQDNFSPGQEVFYSCEPSYDLRGAASL 1691



 Score = 26.6 bits (57), Expect = 4.5
 Identities = 11/44 (25%), Positives = 21/44 (47%), Gaps = 1/44 (2%)

Query: 41   VFKPPPALECQRRHVKCHRDHLDKKEDLICPCKVSYDVTSARDM 84
            V +PPP +     H   H+D+    +++   C+  YD+  A  +
Sbjct: 1196 VCQPPPEI-LHGEHTPSHQDNFSPGQEVFYSCEPGYDLRGAASL 1238


>gi|26051258 RAS guanyl releasing protein 4 isoform a [Homo sapiens]
          Length = 673

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDK 64
           H F    +  P  CD+C+  LW V K      C+   + CH+   D+
Sbjct: 541 HTFHEVTFRKPTFCDSCSGFLWGVTK--QGYRCRECGLCCHKHCRDQ 585


>gi|226246586 RAS guanyl releasing protein 4 isoform g [Homo
           sapiens]
          Length = 576

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDK 64
           H F    +  P  CD+C+  LW V K      C+   + CH+   D+
Sbjct: 444 HTFHEVTFRKPTFCDSCSGFLWGVTK--QGYRCRECGLCCHKHCRDQ 488


>gi|226246584 RAS guanyl releasing protein 4 isoform f [Homo
           sapiens]
          Length = 484

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDK 64
           H F    +  P  CD+C+  LW V K      C+   + CH+   D+
Sbjct: 352 HTFHEVTFRKPTFCDSCSGFLWGVTK--QGYRCRECGLCCHKHCRDQ 396


>gi|226246581 RAS guanyl releasing protein 4 isoform e [Homo
           sapiens]
          Length = 639

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDK 64
           H F    +  P  CD+C+  LW V K      C+   + CH+   D+
Sbjct: 507 HTFHEVTFRKPTFCDSCSGFLWGVTK--QGYRCRECGLCCHKHCRDQ 551


>gi|226246579 RAS guanyl releasing protein 4 isoform d [Homo
           sapiens]
          Length = 604

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDK 64
           H F    +  P  CD+C+  LW V K      C+   + CH+   D+
Sbjct: 472 HTFHEVTFRKPTFCDSCSGFLWGVTK--QGYRCRECGLCCHKHCRDQ 516


>gi|226246577 RAS guanyl releasing protein 4 isoform c [Homo
           sapiens]
          Length = 581

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDK 64
           H F    +  P  CD+C+  LW V K      C+   + CH+   D+
Sbjct: 449 HTFHEVTFRKPTFCDSCSGFLWGVTK--QGYRCRECGLCCHKHCRDQ 493


>gi|226246575 RAS guanyl releasing protein 4 isoform b [Homo
           sapiens]
          Length = 659

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDK 64
           H F    +  P  CD+C+  LW V K      C+   + CH+   D+
Sbjct: 527 HTFHEVTFRKPTFCDSCSGFLWGVTK--QGYRCRECGLCCHKHCRDQ 571


>gi|213385270 RAS guanyl releasing protein 3 (calcium and
           DAG-regulated) isoform 1 [Homo sapiens]
          Length = 690

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDKKEDLICPCK 73
           H F    Y  P  C+ CA  LW + K     +C+     CH+     K+ L+  C+
Sbjct: 495 HNFQEMTYLKPTFCEHCAGFLWGIIK--QGYKCKDCGANCHK---QCKDLLVLACR 545


>gi|24762239 RAS guanyl releasing protein 3 (calcium and
           DAG-regulated) isoform 1 [Homo sapiens]
          Length = 690

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDKKEDLICPCK 73
           H F    Y  P  C+ CA  LW + K     +C+     CH+     K+ L+  C+
Sbjct: 495 HNFQEMTYLKPTFCEHCAGFLWGIIK--QGYKCKDCGANCHK---QCKDLLVLACR 545


>gi|7662334 RAS guanyl releasing protein 3 (calcium and
           DAG-regulated) isoform 2 [Homo sapiens]
          Length = 689

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHRDHLDKKEDLICPCK 73
           H F    Y  P  C+ CA  LW + K     +C+     CH+     K+ L+  C+
Sbjct: 494 HNFQEMTYLKPTFCEHCAGFLWGIIK--QGYKCKDCGANCHK---QCKDLLVLACR 544


>gi|120659787 protein kinase D2 isoform B [Homo sapiens]
          Length = 721

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHR 59
           H F+   Y  P  C AC K L  +F+    L+C+     CH+
Sbjct: 108 HTFLIHSYTRPTVCQACKKLLKGLFR--QGLQCKDCKFNCHK 147


>gi|120659785 protein kinase D2 isoform A [Homo sapiens]
          Length = 878

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHR 59
           H F+   Y  P  C AC K L  +F+    L+C+     CH+
Sbjct: 265 HTFLIHSYTRPTVCQACKKLLKGLFR--QGLQCKDCKFNCHK 304


>gi|120659782 protein kinase D2 isoform A [Homo sapiens]
          Length = 878

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 18  HEFIPTLYHFPANCDACAKPLWHVFKPPPALECQRRHVKCHR 59
           H F+   Y  P  C AC K L  +F+    L+C+     CH+
Sbjct: 265 HTFLIHSYTRPTVCQACKKLLKGLFR--QGLQCKDCKFNCHK 304


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.136    0.457 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,979,376
Number of Sequences: 37866
Number of extensions: 259757
Number of successful extensions: 574
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 553
Number of HSP's gapped (non-prelim): 50
length of query: 118
length of database: 18,247,518
effective HSP length: 88
effective length of query: 30
effective length of database: 14,915,310
effective search space: 447459300
effective search space used: 447459300
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.