Search of human proteins with 239745682

Search of human proteins with 239745682

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745682 PREDICTED: hypothetical protein XP_002343543 [Homo
sapiens]
         (302 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239745682 PREDICTED: hypothetical protein XP_002343543 [Homo ...   624   e-179
gi|239756699 PREDICTED: hypothetical protein [Homo sapiens]           508   e-144
gi|122937271 WAS protein homolog associated with actin, golgi me...    36   0.048
gi|221307473 ArfGAP with SH3 domain, ankyrin repeat and PH domai...    36   0.048
gi|19923540 ArfGAP with SH3 domain, ankyrin repeat and PH domain...    36   0.048
gi|45935385 SAM and SH3 domain containing 1 [Homo sapiens]             35   0.081
gi|46276868 hypothetical protein LOC9710 [Homo sapiens]                35   0.081
gi|67782338 amyloid precursor-like protein 1 isoform 1 precursor...    35   0.11 
gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]         34   0.14 
gi|160707881 formin 2 [Homo sapiens]                                   34   0.14 
gi|21327715 transcription elongation regulator 1 isoform 1 [Homo...    34   0.14 
gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]             34   0.18 
gi|55956910 meningioma  1 [Homo sapiens]                               34   0.18 
gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]       34   0.18 
gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]       34   0.18 
gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]       34   0.18 
gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens]        34   0.18 
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]          33   0.24 
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]          33   0.24 
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]          33   0.24 
gi|154426272 hypothetical protein LOC54540 [Homo sapiens]              33   0.24 
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]                33   0.40 
gi|210032580 SET domain containing 1B [Homo sapiens]                   32   0.53 
gi|21361766 zinc finger protein 692 isoform 2 [Homo sapiens]           32   0.53 
gi|209862873 zinc finger protein 692 isoform 1 [Homo sapiens]          32   0.53 
gi|91208418 transcription elongation regulator 1 isoform 2 [Homo...    32   0.53 
gi|116812612 LY6/PLAUR domain containing 1 isoform a [Homo sapiens]    32   0.53 
gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein...    32   0.53 
gi|116812604 LY6/PLAUR domain containing 1 isoform b [Homo sapiens]    32   0.53 
gi|21687062 hypothetical protein LOC124402 [Homo sapiens]              32   0.53 

>gi|239745682 PREDICTED: hypothetical protein XP_002343543 [Homo
           sapiens]
          Length = 302

 Score =  624 bits (1609), Expect = e-179
 Identities = 302/302 (100%), Positives = 302/302 (100%)

Query: 1   MATLFSTTLGRSCQVMDIWREAWWKLGSVAITVSSVASLVVGGGSRIVQGALGTQEIRPC 60
           MATLFSTTLGRSCQVMDIWREAWWKLGSVAITVSSVASLVVGGGSRIVQGALGTQEIRPC
Sbjct: 1   MATLFSTTLGRSCQVMDIWREAWWKLGSVAITVSSVASLVVGGGSRIVQGALGTQEIRPC 60

Query: 61  WLAASQAHSGSRSSIIGTRPPHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRAGRLQ 120
           WLAASQAHSGSRSSIIGTRPPHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRAGRLQ
Sbjct: 61  WLAASQAHSGSRSSIIGTRPPHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRAGRLQ 120

Query: 121 PLCASCSHRPFDTPKDPGAPGSSTPILRPLLHTRIPPASHTAQRPPDTLSPALTGAFRQA 180
           PLCASCSHRPFDTPKDPGAPGSSTPILRPLLHTRIPPASHTAQRPPDTLSPALTGAFRQA
Sbjct: 121 PLCASCSHRPFDTPKDPGAPGSSTPILRPLLHTRIPPASHTAQRPPDTLSPALTGAFRQA 180

Query: 181 QDAVALHPAVTREPDLVPGSGALHRDPVAEPGVVLKEVPFAQFHKQQRPQILRYFHLEFS 240
           QDAVALHPAVTREPDLVPGSGALHRDPVAEPGVVLKEVPFAQFHKQQRPQILRYFHLEFS
Sbjct: 181 QDAVALHPAVTREPDLVPGSGALHRDPVAEPGVVLKEVPFAQFHKQQRPQILRYFHLEFS 240

Query: 241 HLAPCGPQSLPERRLPVLADQPQLHLVVGTGIERGPSGHADAVETHLAQRCFAPSGGEGW 300
           HLAPCGPQSLPERRLPVLADQPQLHLVVGTGIERGPSGHADAVETHLAQRCFAPSGGEGW
Sbjct: 241 HLAPCGPQSLPERRLPVLADQPQLHLVVGTGIERGPSGHADAVETHLAQRCFAPSGGEGW 300

Query: 301 TS 302
           TS
Sbjct: 301 TS 302


>gi|239756699 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 302

 Score =  508 bits (1309), Expect = e-144
 Identities = 245/247 (99%), Positives = 245/247 (99%), Gaps = 1/247 (0%)

Query: 57  IRPCWLAASQAHSGSRSSIIGTRPPHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRA 116
           IRPCWLAASQAHSGSRSSIIGTRPPHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRA
Sbjct: 56  IRPCWLAASQAHSGSRSSIIGTRPPHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRA 115

Query: 117 GRLQPLCASCSHRPFDTPKDPGAPGSSTPILRPLLHTRIPPASHTAQRPPDTLSPALTGA 176
           GRLQPLCASCSHRPFDTPKDPGAPGSSTPILRPLLHTRIPPASHTAQRPPDTLSP LTGA
Sbjct: 116 GRLQPLCASCSHRPFDTPKDPGAPGSSTPILRPLLHTRIPPASHTAQRPPDTLSPTLTGA 175

Query: 177 FRQAQDAVALHPAVTREPDLVPGSGALHRDPVAEPGVVLKEVPFAQFHKQQRPQILRYFH 236
           FRQAQDAVALHPAVTREPDLVPGSGALHRDPVAEPGVVLKEVPFAQFHKQQRPQILRYFH
Sbjct: 176 FRQAQDAVALHPAVTREPDLVPGSGALHRDPVAEPGVVLKEVPFAQFHKQQRPQILRYFH 235

Query: 237 LEFSHLAPCGPQSLPERRLPVLADQPQLHLVVGTGIERGPSGHADAVETHLAQRCFAPSG 296
           LEFSHLAPCGPQSLPERRLPVLADQPQLHLVVGTGIERGPSGHADAVETHLAQRCFAPSG
Sbjct: 236 LEFSHLAPCGPQSLPERRLPVLADQPQLHLVVGTGIERGPSGHADAVETHLAQRCFAPSG 295

Query: 297 G-EGWTS 302
           G EGWTS
Sbjct: 296 GEEGWTS 302


>gi|122937271 WAS protein homolog associated with actin, golgi
           membranes and microtubules [Homo sapiens]
          Length = 809

 Score = 35.8 bits (81), Expect = 0.048
 Identities = 25/82 (30%), Positives = 36/82 (43%), Gaps = 3/82 (3%)

Query: 122 LCASCSHRPFDTPKDPGAPGSSTPILRPLLHTRIP--PASHTAQRPPD-TLSPALTGAFR 178
           +C S + RP D+ +    PGS   +L  L H R P       A RPP  +++  +  A R
Sbjct: 689 VCESPAERPRDSLESFSCPGSMDEVLASLRHGRAPLRKVEVPAVRPPHASINEHILAAIR 748

Query: 179 QAQDAVALHPAVTREPDLVPGS 200
           Q      +HP +   P   P S
Sbjct: 749 QGVKLKKVHPDLGPNPSSKPTS 770


>gi|221307473 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
           isoform b [Homo sapiens]
          Length = 894

 Score = 35.8 bits (81), Expect = 0.048
 Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 9/129 (6%)

Query: 55  QEIRPCWLAA-SQAHSGSRSSIIGTRPPHFTAEL----PQGSDVHTSSSFSSWACSSSMP 109
           +E + C L   +QAH  S    I  +     A L    PQG              S ++ 
Sbjct: 697 EEEKRCLLKLPAQAHWASGRLDISNKTYETVASLGAATPQGESEDCPPPLPVKNSSRTLV 756

Query: 110 GGNTRRAGRLQPLCASCSHRPFDTPKDPGAPGSSTPILRPLL---HTRIPPASHTAQR-P 165
            G  R A   +   +S S    +TP+  G+P SS+ ++ PL     ++ PP S    R P
Sbjct: 757 QGCARHASGDRSEVSSLSSEAPETPESLGSPASSSSLMSPLEPGDPSQAPPNSEEGLREP 816

Query: 166 PDTLSPALT 174
           P T  P+LT
Sbjct: 817 PGTSRPSLT 825


>gi|19923540 ArfGAP with SH3 domain, ankyrin repeat and PH domain 3
           isoform a [Homo sapiens]
          Length = 903

 Score = 35.8 bits (81), Expect = 0.048
 Identities = 37/129 (28%), Positives = 54/129 (41%), Gaps = 9/129 (6%)

Query: 55  QEIRPCWLAA-SQAHSGSRSSIIGTRPPHFTAEL----PQGSDVHTSSSFSSWACSSSMP 109
           +E + C L   +QAH  S    I  +     A L    PQG              S ++ 
Sbjct: 706 EEEKRCLLKLPAQAHWASGRLDISNKTYETVASLGAATPQGESEDCPPPLPVKNSSRTLV 765

Query: 110 GGNTRRAGRLQPLCASCSHRPFDTPKDPGAPGSSTPILRPLL---HTRIPPASHTAQR-P 165
            G  R A   +   +S S    +TP+  G+P SS+ ++ PL     ++ PP S    R P
Sbjct: 766 QGCARHASGDRSEVSSLSSEAPETPESLGSPASSSSLMSPLEPGDPSQAPPNSEEGLREP 825

Query: 166 PDTLSPALT 174
           P T  P+LT
Sbjct: 826 PGTSRPSLT 834


>gi|45935385 SAM and SH3 domain containing 1 [Homo sapiens]
          Length = 1247

 Score = 35.0 bits (79), Expect = 0.081
 Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 3/111 (2%)

Query: 116  AGRLQPLCASCSHRPFDTPKDPGAPGSSTPILRPLLHTRIPPASHTAQRPPDTLSPALTG 175
            +G L    A C      +P  P +P    P L P   +   P S  + RPP  LS     
Sbjct: 1008 SGALPSPDAPCLPVKRGSPASPTSPSDCPPALAPRPLSGQAPGSPPSTRPPPWLSELPEN 1067

Query: 176  AFRQAQDAVALHPAVTREPDLVPGSG--ALHRDPVAEPGVVLKEVPFAQFH 224
               Q +  V L PA+TR+     G     L  + +   G+ L E P++  H
Sbjct: 1068 TSLQ-EHGVKLGPALTRKVSCARGVDLETLTENKLHAEGIDLTEEPYSDKH 1117


>gi|46276868 hypothetical protein LOC9710 [Homo sapiens]
          Length = 1070

 Score = 35.0 bits (79), Expect = 0.081
 Identities = 34/102 (33%), Positives = 45/102 (44%), Gaps = 18/102 (17%)

Query: 175 GAFRQAQDAVALHPAVTREPDLVPGSGALHRDPVAEPGVVLKEVPFAQFHKQQRPQILRY 234
           GA +  Q ++ + P     P   P +GA H     +PG+     P  Q  KQQ+PQ+  Y
Sbjct: 685 GAMQPQQPSLPVPP-----PPRAPQAGA-HTPLTPQPGLA----PQQQSPKQQQPQVQYY 734

Query: 235 FHLEFSHLAPCGPQS-LPERRLP---VLADQPQLHLVVGTGI 272
            HL    L P GPQ   P+ R P   V     Q    VG G+
Sbjct: 735 QHL----LQPIGPQQPPPQPRAPGKWVHGSSQQPAQAVGAGL 772


>gi|67782338 amyloid precursor-like protein 1 isoform 1 precursor
           [Homo sapiens]
          Length = 651

 Score = 34.7 bits (78), Expect = 0.11
 Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 12/112 (10%)

Query: 81  PHFTAEL-PQGSDVHTSSSFSSWACSSSMPGGNTRRAGRLQPLCASCSHRPFDTPKDPGA 139
           PH   EL PQ  ++  S         +  PGG++   G LQP  +  +  P   PK    
Sbjct: 471 PHLAQELRPQIQELLHSEHLGPSELEAPAPGGSSEDKGGLQPPDSKDADTPMTLPKGSTE 530

Query: 140 PGSSTP---ILRPL------LHTRIPPA--SHTAQRPPDTLSPALTGAFRQA 180
             +++P    + PL      ++  +P     H+++   D L+PA TG  R+A
Sbjct: 531 QDAASPEKEKMNPLEQYERKVNASVPRGFPFHSSEIQRDELAPAGTGVSREA 582


>gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens]
          Length = 1682

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 32/111 (28%), Positives = 46/111 (41%), Gaps = 22/111 (19%)

Query: 77  GTRPPH------FTAELPQGSDVHTS--------SSFSSWACSSSMPGGNTRRAGRLQPL 122
           G RPP         A  P GSD+  S        SS S  A ++ +P   +R  G     
Sbjct: 338 GPRPPGAESHGCLPATRPPGSDLRESRVQRSRMDSSVSPAATTACVPYAPSRPPGLPGTT 397

Query: 123 CASCSHRPFDT--------PKDPGAPGSSTPILRPLLHTRIPPASHTAQRP 165
            +S S    +T        P  PGA    TP L    H R+ P++H++++P
Sbjct: 398 TSSSSSSSSNTGLRGVEPNPGIPGADHYQTPALEVSHHGRLGPSAHSSRKP 448


>gi|160707881 formin 2 [Homo sapiens]
          Length = 1722

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 38/140 (27%), Positives = 51/140 (36%), Gaps = 26/140 (18%)

Query: 77  GTRPPHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRAGRLQPLCASCSHRP---FDT 133
           G++PPH  +   Q S  H+ SS    +C+   P           P   S S  P      
Sbjct: 826 GSQPPHSISTEFQTSHEHSVSSAFKNSCNIPSPPP--------LPCTESSSSMPGLGMVP 877

Query: 134 PKDPGAPGSSTPILRPLLHTRIPPASHTAQRPPDTLSPALTGAFRQAQDAVALHPAVTRE 193
           P  P  PG + P L      + PP   T   PP    P L GA         + P     
Sbjct: 878 PPPPPLPGMTVPTLPSTAIPQPPPLQGTEMLPPP--PPPLPGA--------GIPP----- 922

Query: 194 PDLVPGSGALHRDPVAEPGV 213
           P  +PG+G L   P+   G+
Sbjct: 923 PPPLPGAGILPLPPLPGAGI 942


>gi|21327715 transcription elongation regulator 1 isoform 1 [Homo
           sapiens]
          Length = 1098

 Score = 34.3 bits (77), Expect = 0.14
 Identities = 40/163 (24%), Positives = 61/163 (37%), Gaps = 15/163 (9%)

Query: 63  AASQAHSGSRSSIIGTRPPHFTAELPQGSDVHTSSSFS--SWACSSSMPGGNTRRAGRLQ 120
           A +QA + +++ +         A+    S   TSS     S + SSS P   T       
Sbjct: 231 AQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTAT 290

Query: 121 PLCASCSHRPFDTPKDPGAPGSSTPILRPLLHTRIP-----PASHTAQRPPDTLSPALTG 175
            +  + S     T +D   P S+  +  P +    P     P     Q  P TL PA+  
Sbjct: 291 SVAQTVST---PTTQDQ-TPSSAVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPAVPH 346

Query: 176 AFRQAQDAVALHPAVTREPDLVPGSGALHRDPVAEPGVVLKEV 218
           +  Q   A+   P V   P  VP  G     P+  PGV + ++
Sbjct: 347 SVPQPTTAIPAFPPVMVPPFRVPLPGM----PIPLPGVAMMQI 385


>gi|89040432 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 212

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 29/72 (40%), Positives = 34/72 (47%), Gaps = 11/72 (15%)

Query: 109 PGGNTRRAGRLQPLCAS--CSHRPFDTPKD-PGAPGSSTPILRPLLHTRIPPASHTAQ-- 163
           PGG      R +P+ AS   S R    P+  PGAPGSS P L P L     P   +A+  
Sbjct: 114 PGG-----ARSRPVAASPAASSRARSRPESSPGAPGSSVPALLPSLPPLAAPRPLSARPR 168

Query: 164 -RPPDTLSPALT 174
            RPP     ALT
Sbjct: 169 LRPPQPQPLALT 180


>gi|55956910 meningioma  1 [Homo sapiens]
          Length = 1320

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 38/170 (22%), Positives = 58/170 (34%), Gaps = 16/170 (9%)

Query: 141 GSSTPILRPLLHTRIPPASHTAQRPPDTLSPALTGAFRQAQDAVALHPAVTREPDLVPGS 200
           GS  P+++P      PP     Q+PP    P   G   +        P   +     P  
Sbjct: 332 GSRHPLMQPPQQAPPPPQQQPPQQPPQQQPPPPPGLLVRQNSCPPALPRPQQGEAGTPSG 391

Query: 201 GALHRDPVAEPGVVLKEVPFAQFHKQQRPQILRYFHLEFSHLAPCGPQSLPERRLP---- 256
           G     P+        E P    H+ +   +  Y    FS   P  PQ  P +RL     
Sbjct: 392 GLQDGGPMLPSQHAQFEYP---IHRLENRSMHPYSEPVFSMQHP-PPQQAPNQRLQHFDA 447

Query: 257 ----VLADQPQLHLVVGTGIER----GPSGHADAVETHLAQRCFAPSGGE 298
                +A +P+       G++R      S H  A++ HL+   +    GE
Sbjct: 448 PPYMNVAKRPRFDFPGSAGVDRCASWNGSMHNGALDNHLSPSAYPGLPGE 497


>gi|195546902 suppressor of Ty 5 homolog isoform b [Homo sapiens]
          Length = 1083

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 37/180 (20%), Positives = 72/180 (40%), Gaps = 19/180 (10%)

Query: 25  KLGSVAITVSSVASLVVGGGSRIVQGALGTQEIRPCWLAASQAH-SGSRSSIIGT----- 78
           +L S   T+S     +   GSR   G   T    P + + +  + SGSR+ + G+     
Sbjct: 731 ELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQ 790

Query: 79  ---RPPHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRAGRL------QPLCASCSHR 129
              R PH+ ++ P      T +   +W    + P   +R           +P  +  ++ 
Sbjct: 791 DGSRTPHYGSQTPLHDGSRTPAQSGAW--DPNNPNTPSRAEEEYEYAFDDEPTPSPQAYG 848

Query: 130 PFDTPKDPGAPGSSTPILRPLLHTRIP--PASHTAQRPPDTLSPALTGAFRQAQDAVALH 187
               P+ PG P  S+P + P  + + P  PA +   +     +P+  G+++ +    + H
Sbjct: 849 GTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYH 908


>gi|195546900 suppressor of Ty 5 homolog isoform a [Homo sapiens]
          Length = 1087

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 37/180 (20%), Positives = 72/180 (40%), Gaps = 19/180 (10%)

Query: 25  KLGSVAITVSSVASLVVGGGSRIVQGALGTQEIRPCWLAASQAH-SGSRSSIIGT----- 78
           +L S   T+S     +   GSR   G   T    P + + +  + SGSR+ + G+     
Sbjct: 735 ELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQ 794

Query: 79  ---RPPHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRAGRL------QPLCASCSHR 129
              R PH+ ++ P      T +   +W    + P   +R           +P  +  ++ 
Sbjct: 795 DGSRTPHYGSQTPLHDGSRTPAQSGAW--DPNNPNTPSRAEEEYEYAFDDEPTPSPQAYG 852

Query: 130 PFDTPKDPGAPGSSTPILRPLLHTRIP--PASHTAQRPPDTLSPALTGAFRQAQDAVALH 187
               P+ PG P  S+P + P  + + P  PA +   +     +P+  G+++ +    + H
Sbjct: 853 GTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYH 912


>gi|161169023 suppressor of Ty 5 homolog isoform a [Homo sapiens]
          Length = 1087

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 37/180 (20%), Positives = 72/180 (40%), Gaps = 19/180 (10%)

Query: 25  KLGSVAITVSSVASLVVGGGSRIVQGALGTQEIRPCWLAASQAH-SGSRSSIIGT----- 78
           +L S   T+S     +   GSR   G   T    P + + +  + SGSR+ + G+     
Sbjct: 735 ELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQ 794

Query: 79  ---RPPHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRAGRL------QPLCASCSHR 129
              R PH+ ++ P      T +   +W    + P   +R           +P  +  ++ 
Sbjct: 795 DGSRTPHYGSQTPLHDGSRTPAQSGAW--DPNNPNTPSRAEEEYEYAFDDEPTPSPQAYG 852

Query: 130 PFDTPKDPGAPGSSTPILRPLLHTRIP--PASHTAQRPPDTLSPALTGAFRQAQDAVALH 187
               P+ PG P  S+P + P  + + P  PA +   +     +P+  G+++ +    + H
Sbjct: 853 GTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYH 912


>gi|20149524 suppressor of Ty 5 homolog isoform a [Homo sapiens]
          Length = 1087

 Score = 33.9 bits (76), Expect = 0.18
 Identities = 37/180 (20%), Positives = 72/180 (40%), Gaps = 19/180 (10%)

Query: 25  KLGSVAITVSSVASLVVGGGSRIVQGALGTQEIRPCWLAASQAH-SGSRSSIIGT----- 78
           +L S   T+S     +   GSR   G   T    P + + +  + SGSR+ + G+     
Sbjct: 735 ELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGSGSRTPMYGSQTPLQ 794

Query: 79  ---RPPHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRAGRL------QPLCASCSHR 129
              R PH+ ++ P      T +   +W    + P   +R           +P  +  ++ 
Sbjct: 795 DGSRTPHYGSQTPLHDGSRTPAQSGAW--DPNNPNTPSRAEEEYEYAFDDEPTPSPQAYG 852

Query: 130 PFDTPKDPGAPGSSTPILRPLLHTRIP--PASHTAQRPPDTLSPALTGAFRQAQDAVALH 187
               P+ PG P  S+P + P  + + P  PA +   +     +P+  G+++ +    + H
Sbjct: 853 GTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQGSYQPSPSPQSYH 912


>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
          Length = 1012

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 52/197 (26%), Positives = 74/197 (37%), Gaps = 31/197 (15%)

Query: 81  PHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRAGRLQPLCASCSH-RPFDTPKDP-- 137
           P  TA  PQGS   + +     A ++ +P  + ++A  L P      H  P  +P  P  
Sbjct: 214 PSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQ 273

Query: 138 ---GAPG--SSTPILRPLLHTRIPPASHTAQRPPDTLSPALTGAFRQAQDAVALHPAVTR 192
              G+ G  S+    +P LH + PP  H+ Q  P    P     F        L P  ++
Sbjct: 274 PLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF-------GLPPQASQ 326

Query: 193 EPDLVPGSGALHRDPVAEPGVVLKEVPFAQ--FHKQQRP--QILRYFHLEFSHLAPCGPQ 248
                 G   L   P A       ++P +Q     QQ P  Q L    L   H+ P  P 
Sbjct: 327 ------GQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP--PP 378

Query: 249 SLPERRLPVLADQPQLH 265
           + P  +LP     PQ H
Sbjct: 379 TTPIPQLPA----PQAH 391



 Score = 28.1 bits (61), Expect = 10.0
 Identities = 27/80 (33%), Positives = 29/80 (36%), Gaps = 14/80 (17%)

Query: 186 LHPAVTREPDLVPGSGALHRDPVAEPGVVLKEVPFAQFHKQQRPQILRYFHLEFSHLAPC 245
           LHPA          S AL   P A P       PFA FH    P       LE   LA  
Sbjct: 783 LHPAANPMEHFARHS-ALTIPPTAGPH------PFASFHPGLNP-------LERERLALA 828

Query: 246 GPQSLPERRLPVLADQPQLH 265
           GPQ  PE   P      ++H
Sbjct: 829 GPQLRPEMSYPDRLAAERIH 848


>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 52/197 (26%), Positives = 74/197 (37%), Gaps = 31/197 (15%)

Query: 81  PHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRAGRLQPLCASCSH-RPFDTPKDP-- 137
           P  TA  PQGS   + +     A ++ +P  + ++A  L P      H  P  +P  P  
Sbjct: 768 PSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQ 827

Query: 138 ---GAPG--SSTPILRPLLHTRIPPASHTAQRPPDTLSPALTGAFRQAQDAVALHPAVTR 192
              G+ G  S+    +P LH + PP  H+ Q  P    P     F        L P  ++
Sbjct: 828 PLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF-------GLPPQASQ 880

Query: 193 EPDLVPGSGALHRDPVAEPGVVLKEVPFAQ--FHKQQRP--QILRYFHLEFSHLAPCGPQ 248
                 G   L   P A       ++P +Q     QQ P  Q L    L   H+ P  P 
Sbjct: 881 ------GQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP--PP 932

Query: 249 SLPERRLPVLADQPQLH 265
           + P  +LP     PQ H
Sbjct: 933 TTPIPQLPA----PQAH 945



 Score = 28.1 bits (61), Expect = 10.0
 Identities = 27/80 (33%), Positives = 29/80 (36%), Gaps = 14/80 (17%)

Query: 186  LHPAVTREPDLVPGSGALHRDPVAEPGVVLKEVPFAQFHKQQRPQILRYFHLEFSHLAPC 245
            LHPA          S AL   P A P       PFA FH    P       LE   LA  
Sbjct: 1337 LHPAANPMEHFARHS-ALTIPPTAGPH------PFASFHPGLNP-------LERERLALA 1382

Query: 246  GPQSLPERRLPVLADQPQLH 265
            GPQ  PE   P      ++H
Sbjct: 1383 GPQLRPEMSYPDRLAAERIH 1402


>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
          Length = 1566

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 52/197 (26%), Positives = 74/197 (37%), Gaps = 31/197 (15%)

Query: 81  PHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRAGRLQPLCASCSH-RPFDTPKDP-- 137
           P  TA  PQGS   + +     A ++ +P  + ++A  L P      H  P  +P  P  
Sbjct: 768 PSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQ 827

Query: 138 ---GAPG--SSTPILRPLLHTRIPPASHTAQRPPDTLSPALTGAFRQAQDAVALHPAVTR 192
              G+ G  S+    +P LH + PP  H+ Q  P    P     F        L P  ++
Sbjct: 828 PLTGSAGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPF-------GLPPQASQ 880

Query: 193 EPDLVPGSGALHRDPVAEPGVVLKEVPFAQ--FHKQQRP--QILRYFHLEFSHLAPCGPQ 248
                 G   L   P A       ++P +Q     QQ P  Q L    L   H+ P  P 
Sbjct: 881 ------GQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKP--PP 932

Query: 249 SLPERRLPVLADQPQLH 265
           + P  +LP     PQ H
Sbjct: 933 TTPIPQLPA----PQAH 945



 Score = 28.1 bits (61), Expect = 10.0
 Identities = 27/80 (33%), Positives = 29/80 (36%), Gaps = 14/80 (17%)

Query: 186  LHPAVTREPDLVPGSGALHRDPVAEPGVVLKEVPFAQFHKQQRPQILRYFHLEFSHLAPC 245
            LHPA          S AL   P A P       PFA FH    P       LE   LA  
Sbjct: 1337 LHPAANPMEHFARHS-ALTIPPTAGPH------PFASFHPGLNP-------LERERLALA 1382

Query: 246  GPQSLPERRLPVLADQPQLH 265
            GPQ  PE   P      ++H
Sbjct: 1383 GPQLRPEMSYPDRLAAERIH 1402


>gi|154426272 hypothetical protein LOC54540 [Homo sapiens]
          Length = 789

 Score = 33.5 bits (75), Expect = 0.24
 Identities = 49/194 (25%), Positives = 65/194 (33%), Gaps = 26/194 (13%)

Query: 90  GSDVHTSSSFSSWACSSSMPGGNTRRAGRLQPLCASCSHR---PFDTPKDPGAPGSSTPI 146
           G D H+SSS SS + SSS        +G   P     +H+    +++P   GA   S+  
Sbjct: 52  GDDSHSSSSSSS-SSSSSSSSSCPGNSGDWDPSSFLSAHKLSGLWNSPHSSGAMPGSSLG 110

Query: 147 LRPLLHTRIPPASHTAQRPPDTLSP-ALTGAFRQAQDAVALHPAVTREPDLVPGSGALHR 205
             P +     P S   Q    T  P + TG   Q    +  HP+    P   P    L  
Sbjct: 111 SPPTIPGEAFPVSEHHQHSDLTAPPNSPTGHHPQPASLIPSHPSSFGSP---PHPHLLPT 167

Query: 206 DPVAEPGVVLKEVPFAQFHKQQRPQILRYFHLEFSHLAPCGPQSLPERRLPVLADQPQLH 265
            P A       E P A       P              PC    LP   +P+L   P   
Sbjct: 168 TPAAPFPAQASECPVAAATAPHTP-------------GPCQSSHLPSTSMPLLKMPPPF- 213

Query: 266 LVVGTGIERGPSGH 279
               +G     SGH
Sbjct: 214 ----SGCSHPCSGH 223


>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
          Length = 778

 Score = 32.7 bits (73), Expect = 0.40
 Identities = 41/144 (28%), Positives = 58/144 (40%), Gaps = 15/144 (10%)

Query: 42  GGGS-----RIVQGALGTQEIRPCWLAASQAHSGSRSSIIGT-RPPHFTAELPQGSDVHT 95
           GGGS     R ++ A  +Q  R    + S A +G  SS + + R P F+     G+    
Sbjct: 410 GGGSPVPTRRALEMAQHSQRSR----SVSGASTGLSSSPLSSPRSPVFSFSPEPGAGDEA 465

Query: 96  SSSFSSWACSSSMPGGNTRRAGR-LQPLCASCSHRPFDTPKDPGAPGSS--TPILRPLLH 152
               S  + + ++P    R  G   QP   S    P   P  PG+P SS  TP+  PL  
Sbjct: 466 RGGGSPTSKTQTLPSRGPRGGGAGEQPPPPSARSTPLPGP--PGSPRSSGGTPLHSPLHT 523

Query: 153 TRIPPASHTAQRPPDTLSPALTGA 176
            R  P       PP +    + GA
Sbjct: 524 PRASPTGTPGTTPPPSPGGGVGGA 547


>gi|210032580 SET domain containing 1B [Homo sapiens]
          Length = 1923

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 34/130 (26%), Positives = 42/130 (32%), Gaps = 5/130 (3%)

Query: 130  PFDTPKDPGAPGSST-PILRPLLHTRIPPASHTAQRPPDTLSPALTGAFRQAQDAVALHP 188
            P   P+ P  P     P      H  +PP       PP T  P L G+  ++Q    +  
Sbjct: 1281 PLPPPRPPRPPSPPPEPETTDASHPSVPPEPLAEDHPPHT--PGLCGSLAKSQSTETVPA 1338

Query: 189  AVTREPDLVPGSGALHRDPVAEPGVVLK-EVPFAQFHKQQRPQIL-RYFHLEFSHLAPCG 246
                EP L  GS  L       PG       P         P+   R F    +   P G
Sbjct: 1339 TPGGEPPLSGGSSGLSLSSPQVPGSPFSYPAPSPSLSSGGLPRTPGRDFSFTPTFSEPSG 1398

Query: 247  PQSLPERRLP 256
            P  LP   LP
Sbjct: 1399 PLLLPVCPLP 1408


>gi|21361766 zinc finger protein 692 isoform 2 [Homo sapiens]
          Length = 519

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 15/99 (15%)

Query: 97  SSFSSWACSSSMPGGNTRRAGRLQPLCASCSHRPFDTPKDPGAPGSSTPILRPL-----L 151
           S  S W  SSS P  +   A RL P   +C+ +  +TP  P A   S+P+  P      L
Sbjct: 207 SDASLWTYSSS-PDDSEPDAPRLLPSPVTCTPKEGETPPAPAA--LSSPLAVPALSASSL 263

Query: 152 HTRIPPASHTAQRPPDTLSP-------ALTGAFRQAQDA 183
            +R PP +    +P  + +P       AL     QAQ A
Sbjct: 264 SSRAPPPAEVRVQPQLSRTPQAAQQTEALASTGSQAQSA 302


>gi|209862873 zinc finger protein 692 isoform 1 [Homo sapiens]
          Length = 524

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 31/99 (31%), Positives = 43/99 (43%), Gaps = 15/99 (15%)

Query: 97  SSFSSWACSSSMPGGNTRRAGRLQPLCASCSHRPFDTPKDPGAPGSSTPILRPL-----L 151
           S  S W  SSS P  +   A RL P   +C+ +  +TP  P A   S+P+  P      L
Sbjct: 212 SDASLWTYSSS-PDDSEPDAPRLLPSPVTCTPKEGETPPAPAA--LSSPLAVPALSASSL 268

Query: 152 HTRIPPASHTAQRPPDTLSP-------ALTGAFRQAQDA 183
            +R PP +    +P  + +P       AL     QAQ A
Sbjct: 269 SSRAPPPAEVRVQPQLSRTPQAAQQTEALASTGSQAQSA 307


>gi|91208418 transcription elongation regulator 1 isoform 2 [Homo
           sapiens]
          Length = 1077

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 40/159 (25%), Positives = 59/159 (37%), Gaps = 15/159 (9%)

Query: 63  AASQAHSGSRSSIIGTRPPHFTAELPQGSDVHTSSSFS--SWACSSSMPGGNTRRAGRLQ 120
           A +QA + +++ +         A+    S   TSS     S + SSS P   T       
Sbjct: 231 AQAQAQAQAQAQVQAQVQAQVQAQAVGASTPTTSSPAPAVSTSTSSSTPSSTTSTTTTAT 290

Query: 121 PLCASCSHRPFDTPKDPGAPGSSTPILRPLLHTRIP-----PASHTAQRPPDTLSPALTG 175
            +  + S     T +D   P S+  +  P +    P     P     Q  P TL PA+  
Sbjct: 291 SVAQTVST---PTTQDQ-TPSSAVSVATPTVSVSTPAPTATPVQTVPQPHPQTLPPAVPH 346

Query: 176 AFRQAQDAVALHPAVTREPDLVPGSGALHRDPVAEPGVV 214
           +  Q   A+   P V   P  VP  G     P+  PGV+
Sbjct: 347 SVPQPTTAIPAFPPVMVPPFRVPLPGM----PIPLPGVL 381


>gi|116812612 LY6/PLAUR domain containing 1 isoform a [Homo sapiens]
          Length = 141

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 93  VHTSSSFSSWACSSSMPGGNTRRA-GRLQPLCASCSHRPFDTPKDPGAPGSSTPILRPLL 151
           ++  S  SS AC  +  G  +  + G+L  +C SC + P      P   GSS   LRP L
Sbjct: 66  MYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASALRPGL 125

Query: 152 HTRI 155
            T I
Sbjct: 126 RTTI 129


>gi|32469511 B-cell CLL/lymphoma 6, member B (zinc finger protein)
           [Homo sapiens]
          Length = 480

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 45/138 (32%), Positives = 55/138 (39%), Gaps = 22/138 (15%)

Query: 64  ASQAHS--GSRSSIIGTRPPHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRAGRLQP 121
           ASQA S  G RSS      P   A LP G +  +SSS SS   SSS  G       RL P
Sbjct: 206 ASQAGSLVGERSS----GQPCPQARLPSGDEASSSSSSSS--SSSSEEGPIPGPQSRLSP 259

Query: 122 LCASCSHRPFDTPKDPGAPGSSTPILRPLLHTRIPPASHTAQRPPDTLSPALTGAFRQAQ 181
             A+   +        GAP +STP L          A  T+  P +   P     F   Q
Sbjct: 260 TAATVQFK-------CGAP-ASTPYL------LTSQAQDTSGSPSERARPLPGSEFFSCQ 305

Query: 182 DAVALHPAVTREPDLVPG 199
           +  A+    +    LVPG
Sbjct: 306 NCEAVAGCSSGLDSLVPG 323


>gi|116812604 LY6/PLAUR domain containing 1 isoform b [Homo sapiens]
          Length = 89

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 1/64 (1%)

Query: 93  VHTSSSFSSWACSSSMPGGNTRRA-GRLQPLCASCSHRPFDTPKDPGAPGSSTPILRPLL 151
           ++  S  SS AC  +  G  +  + G+L  +C SC + P      P   GSS   LRP L
Sbjct: 14  MYRKSCASSAACLIASAGYQSFCSPGKLNSVCISCCNTPLCNGPRPKKRGSSASALRPGL 73

Query: 152 HTRI 155
            T I
Sbjct: 74  RTTI 77


>gi|21687062 hypothetical protein LOC124402 [Homo sapiens]
          Length = 177

 Score = 32.3 bits (72), Expect = 0.53
 Identities = 33/100 (33%), Positives = 41/100 (41%), Gaps = 21/100 (21%)

Query: 63  AASQAHSGSRSSIIGTR----PPHFTAELPQGSDVHTSSSFSSWACSSSMPGGNTRRAGR 118
           A+   HSG   S +       PPHF    P  +   +SS+ SSW  ++S PGG       
Sbjct: 87  ASESFHSGGSGSPMAATATSPPPHF----PHAAT--SSSAASSWPTAASPPGGPQHH--- 137

Query: 119 LQPLCASCSHRPFDTPKDPGAPGSSTPILRPLLHTRIPPA 158
            QP        P  TP  P +P S  P L P   T  P A
Sbjct: 138 -QP------QPPLWTPTPP-SPASDWPPLAPQQATSEPRA 169


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.133    0.421 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,892,006
Number of Sequences: 37866
Number of extensions: 823087
Number of successful extensions: 2898
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 106
Number of HSP's that attempted gapping in prelim test: 2759
Number of HSP's gapped (non-prelim): 210
length of query: 302
length of database: 18,247,518
effective HSP length: 102
effective length of query: 200
effective length of database: 14,385,186
effective search space: 2877037200
effective search space used: 2877037200
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.