Search of human proteins with 239745607

Search of human proteins with 239745607

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239745607 PREDICTED: nuclear pore complex interacting
protein-like 2 [Homo sapiens]
         (265 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239745607 PREDICTED: nuclear pore complex interacting protein...   548   e-156
gi|239745494 PREDICTED: similar to NPIP-like protein ENSP0000034...   358   3e-99
gi|239745482 PREDICTED: hypothetical protein [Homo sapiens]           343   9e-95
gi|239746014 PREDICTED: hypothetical protein LOC283846 [Homo sap...   333   7e-92
gi|239745430 PREDICTED: hypothetical protein XP_002343465 [Homo ...   324   6e-89
gi|239745418 PREDICTED: similar to GPS, PLAT and transmembrane d...   324   6e-89
gi|239745416 PREDICTED: similar to GPS, PLAT and transmembrane d...   324   6e-89
gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-ch...   235   3e-62
gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]         233   1e-61
gi|157074225 nuclear pore complex interacting protein-like 3 [Ho...   233   1e-61
gi|239745475 PREDICTED: similar to NPIP-like protein ENSP0000028...   219   2e-57
gi|239745469 PREDICTED: nuclear pore complex interacting protein...   218   6e-57
gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isofor...   213   1e-55
gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo sapi...   210   1e-54
gi|148596994 nuclear pore complex interacting protein [Homo sapi...   202   2e-52
gi|193290184 hypothetical protein LOC339047 [Homo sapiens]            199   2e-51
gi|4506609 ribosomal protein L19 [Homo sapiens]                        33   0.26 
gi|13129104 coiled-coil domain containing 86 [Homo sapiens]            33   0.34 
gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]            32   0.44 
gi|144953913 zinc finger protein 714 [Homo sapiens]                    32   0.44 
gi|239835767 developmental pluripotency associated 2 [Homo sapiens]    31   1.3  
gi|147903302 MAP7 domain containing 3 [Homo sapiens]                   30   1.7  
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]     30   2.2  
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo...    30   2.8  
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo...    30   2.8  
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo...    30   2.8  
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ...    30   2.8  
gi|157364937 OTU domain containing 6B [Homo sapiens]                   29   3.7  
gi|41152097 DNA segment on chromosome X and Y (unique) 155 expre...    29   4.8  
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]            28   6.3  

>gi|239745607 PREDICTED: nuclear pore complex interacting
           protein-like 2 [Homo sapiens]
          Length = 265

 Score =  548 bits (1413), Expect = e-156
 Identities = 265/265 (100%), Positives = 265/265 (100%)

Query: 1   MRLRFWLLIWLLLGFISHQPTPVINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNL 60
           MRLRFWLLIWLLLGFISHQPTPVINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNL
Sbjct: 1   MRLRFWLLIWLLLGFISHQPTPVINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNL 60

Query: 61  IIIIIGFLRRDTFTILFCTSYLCVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKI 120
           IIIIIGFLRRDTFTILFCTSYLCVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKI
Sbjct: 61  IIIIIGFLRRDTFTILFCTSYLCVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKI 120

Query: 121 GLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAED 180
           GLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAED
Sbjct: 121 GLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAED 180

Query: 181 YHKCKIPPSARKPLCNWVSLLVFLAFEHSLPGQDMDTFFSLQLCAQALQREMAERKAAYR 240
           YHKCKIPPSARKPLCNWVSLLVFLAFEHSLPGQDMDTFFSLQLCAQALQREMAERKAAYR
Sbjct: 181 YHKCKIPPSARKPLCNWVSLLVFLAFEHSLPGQDMDTFFSLQLCAQALQREMAERKAAYR 240

Query: 241 HHSPIPVGNRVVQKHLHPHPVGPLI 265
           HHSPIPVGNRVVQKHLHPHPVGPLI
Sbjct: 241 HHSPIPVGNRVVQKHLHPHPVGPLI 265


>gi|239745494 PREDICTED: similar to NPIP-like protein
           ENSP00000346774 [Homo sapiens]
          Length = 221

 Score =  358 bits (918), Expect = 3e-99
 Identities = 179/199 (89%), Positives = 179/199 (89%), Gaps = 17/199 (8%)

Query: 84  VSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKG-----------------NKIGLKDVI 126
           VS LKTIFWSRNGHDGSTDVQQRAWRSNRSRQKG                 NKIGLKDVI
Sbjct: 23  VSLLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDVI 82

Query: 127 TLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKI 186
           TLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKI
Sbjct: 83  TLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCKI 142

Query: 187 PPSARKPLCNWVSLLVFLAFEHSLPGQDMDTFFSLQLCAQALQREMAERKAAYRHHSPIP 246
           PPSARK LCNWVSL VFLAFEHSLPGQDMDTFFSLQLCAQALQREMAERKAAYRHHSPIP
Sbjct: 143 PPSARKALCNWVSLFVFLAFEHSLPGQDMDTFFSLQLCAQALQREMAERKAAYRHHSPIP 202

Query: 247 VGNRVVQKHLHPHPVGPLI 265
           VGNRVVQKHLHPHPVGPLI
Sbjct: 203 VGNRVVQKHLHPHPVGPLI 221


>gi|239745482 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 449

 Score =  343 bits (880), Expect = 9e-95
 Identities = 180/230 (78%), Positives = 185/230 (80%), Gaps = 23/230 (10%)

Query: 23  VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRDTFTILFCTSYL 82
           VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRR TF ILFCTS L
Sbjct: 58  VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRYTFNILFCTSCL 117

Query: 83  CVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQK-----------------GNKIGLKDV 125
           CVSFLKTIFWSRNGHDGS DVQQRAWRSNRSRQK                 GNKIGLKDV
Sbjct: 118 CVSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGLRSICMHTKKRVSSFRGNKIGLKDV 177

Query: 126 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK 185
           ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK
Sbjct: 178 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK 237

Query: 186 IPPSARKPLCNWVSLLVFLAFEHSLPGQDMDTFFSLQLCAQALQREMAER 235
           IPPSARKPLCNWV +    A EH          + L L A+ L+  M  +
Sbjct: 238 IPPSARKPLCNWVRM---AAAEHR---HSSGLPYWLYLTAETLKNRMGRQ 281


>gi|239746014 PREDICTED: hypothetical protein LOC283846 [Homo
           sapiens]
          Length = 224

 Score =  333 bits (855), Expect = 7e-92
 Identities = 167/201 (83%), Positives = 172/201 (85%), Gaps = 17/201 (8%)

Query: 82  LCVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKG-----------------NKIGLKD 124
           +C+S LKTI WSRNGHDGSTDVQQRAWRSNR RQKG                 NKIGLKD
Sbjct: 24  ICMSLLKTILWSRNGHDGSTDVQQRAWRSNRCRQKGLRSICMHTKKRVSSFPGNKIGLKD 83

Query: 125 VITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKC 184
           VITL RHVETKVRAKIRKRKVTTKIN HDKINGKRKTA+ QKMFQR QEL RRAEDYHK 
Sbjct: 84  VITLWRHVETKVRAKIRKRKVTTKINHHDKINGKRKTAKNQKMFQRVQELWRRAEDYHKR 143

Query: 185 KIPPSARKPLCNWVSLLVFLAFEHSLPGQDMDTFFSLQLCAQALQREMAERKAAYRHHSP 244
           KIPPSARKPLCNWVSLLVFLAF HSLPGQDMDTFFSLQLCAQALQREMAER+AAY+ HSP
Sbjct: 144 KIPPSARKPLCNWVSLLVFLAFGHSLPGQDMDTFFSLQLCAQALQREMAERRAAYKPHSP 203

Query: 245 IPVGNRVVQKHLHPHPVGPLI 265
           IPVGNRV QKHLHPHPVGPLI
Sbjct: 204 IPVGNRVAQKHLHPHPVGPLI 224


>gi|239745430 PREDICTED: hypothetical protein XP_002343465 [Homo
           sapiens]
          Length = 317

 Score =  324 bits (830), Expect = 6e-89
 Identities = 179/277 (64%), Positives = 195/277 (70%), Gaps = 54/277 (19%)

Query: 23  VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRDTFTILFCTSYL 82
           VIN+LA +RHR TDFG              SP      ++II  FLR   F I  CTSYL
Sbjct: 41  VINTLADHRHRGTDFG-------------GSPW-----LLIITVFLRSYKFAISLCTSYL 82

Query: 83  CVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRK 142
           CVSFLKTIF S+NGHDGSTDVQQRA RSN  RQ+G KI L+D+ TL R VETKVRAKIRK
Sbjct: 83  CVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGIKIVLEDIFTLWRQVETKVRAKIRK 142

Query: 143 RKVTTKINRHDKINGKRKTARKQ------------------------------------K 166
            KVTTK+NRHDKINGKRKTA++                                     +
Sbjct: 143 MKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYME 202

Query: 167 MFQRAQELRRRAEDYHKCKIPPSARKPLCNWVSLLVFLAFEHSLPGQDMDTFFSLQLCAQ 226
           MFQRAQ LRRRAEDY++CKI PSARKPLCN VSLLVFLAF HSLPGQDMDTFFSL+LCAQ
Sbjct: 203 MFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFLAFGHSLPGQDMDTFFSLRLCAQ 262

Query: 227 ALQREMAERKAAYRHHSPIPVGNRVVQKHLHPHPVGP 263
           ALQREMAERKAAY+HHSPIPVGNRV QKHLHPHPVGP
Sbjct: 263 ALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGP 299


>gi|239745418 PREDICTED: similar to GPS, PLAT and transmembrane
           domain-containing protein FLJ00285 [Homo sapiens]
          Length = 317

 Score =  324 bits (830), Expect = 6e-89
 Identities = 179/277 (64%), Positives = 195/277 (70%), Gaps = 54/277 (19%)

Query: 23  VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRDTFTILFCTSYL 82
           VIN+LA +RHR TDFG              SP      ++II  FLR   F I  CTSYL
Sbjct: 41  VINTLADHRHRGTDFG-------------GSPW-----LLIITVFLRSYKFAISLCTSYL 82

Query: 83  CVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRK 142
           CVSFLKTIF S+NGHDGSTDVQQRA RSNR RQ+G KI L+D+ TL R VETKVRAKI K
Sbjct: 83  CVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICK 142

Query: 143 RKVTTKINRHDKINGKRKTARKQ------------------------------------K 166
            KVTTK+NRHDKINGKRKTA++                                     +
Sbjct: 143 MKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYME 202

Query: 167 MFQRAQELRRRAEDYHKCKIPPSARKPLCNWVSLLVFLAFEHSLPGQDMDTFFSLQLCAQ 226
           MFQRAQ LRRRAEDY++CKI PSARKPLCN VSLLVFLAF HSLPGQDMDTFFSL+LCAQ
Sbjct: 203 MFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFLAFGHSLPGQDMDTFFSLRLCAQ 262

Query: 227 ALQREMAERKAAYRHHSPIPVGNRVVQKHLHPHPVGP 263
           ALQREMAERKAAY+HHSPIPVGNRV QKHLHPHPVGP
Sbjct: 263 ALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGP 299


>gi|239745416 PREDICTED: similar to GPS, PLAT and transmembrane
           domain-containing protein FLJ00285 [Homo sapiens]
          Length = 317

 Score =  324 bits (830), Expect = 6e-89
 Identities = 179/277 (64%), Positives = 195/277 (70%), Gaps = 54/277 (19%)

Query: 23  VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRDTFTILFCTSYL 82
           VIN+LA +RHR TDFG              SP      ++II  FLR   F I  CTSYL
Sbjct: 41  VINTLADHRHRGTDFG-------------GSPW-----LLIITVFLRSYKFAISLCTSYL 82

Query: 83  CVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRK 142
           CVSFLKTIF S+NGHDGSTDVQQRA RSNR RQ+G KI L+D+ TL R VETKVRAKI K
Sbjct: 83  CVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLWRQVETKVRAKICK 142

Query: 143 RKVTTKINRHDKINGKRKTARKQ------------------------------------K 166
            KVTTK+NRHDKINGKRKTA++                                     +
Sbjct: 143 MKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYME 202

Query: 167 MFQRAQELRRRAEDYHKCKIPPSARKPLCNWVSLLVFLAFEHSLPGQDMDTFFSLQLCAQ 226
           MFQRAQ LRRRAEDY++CKI PSARKPLCN VSLLVFLAF HSLPGQDMDTFFSL+LCAQ
Sbjct: 203 MFQRAQALRRRAEDYYRCKITPSARKPLCNRVSLLVFLAFGHSLPGQDMDTFFSLRLCAQ 262

Query: 227 ALQREMAERKAAYRHHSPIPVGNRVVQKHLHPHPVGP 263
           ALQREMAERKAAY+HHSPIPVGNRV QKHLHPHPVGP
Sbjct: 263 ALQREMAERKAAYKHHSPIPVGNRVAQKHLHPHPVGP 299


>gi|239745501 PREDICTED: similar to acyl-CoA synthetase medium-chain
           family member 2 [Homo sapiens]
          Length = 1122

 Score =  235 bits (600), Expect = 3e-62
 Identities = 131/195 (67%), Positives = 135/195 (69%), Gaps = 35/195 (17%)

Query: 23  VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRDTFTILFCTSYL 82
           VIN+LA + HR TDFG      P  H              III F       I     YL
Sbjct: 41  VINTLADHHHRGTDFG----GSPWLH--------------IIIAFPTSYKVVITLWIVYL 82

Query: 83  CVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQ-----------------KGNKIGLKDV 125
            VS LKTIFWSRNGHDGSTDVQQRAWRSNR RQ                 +GNKIGLKDV
Sbjct: 83  WVSLLKTIFWSRNGHDGSTDVQQRAWRSNRRRQEGLRSICMHTKKRVSSFRGNKIGLKDV 142

Query: 126 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK 185
           ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK
Sbjct: 143 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK 202

Query: 186 IPPSARKPLCNWVSL 200
           IPPSARK LCNWV +
Sbjct: 203 IPPSARKALCNWVRM 217


>gi|209529739 hypothetical protein LOC100132247 [Homo sapiens]
          Length = 1133

 Score =  233 bits (594), Expect = 1e-61
 Identities = 129/195 (66%), Positives = 134/195 (68%), Gaps = 35/195 (17%)

Query: 23  VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRDTFTILFCTSYL 82
           VIN+LA + HR TDFG      P  H              +II F       I     YL
Sbjct: 41  VINTLADHHHRGTDFG----GSPWLH--------------VIIAFPTSYKVVITLWIVYL 82

Query: 83  CVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQ-----------------KGNKIGLKDV 125
            VS LKTIFWSRNGHDGSTDVQQRAWRSNR RQ                 +GNKIGLKDV
Sbjct: 83  WVSLLKTIFWSRNGHDGSTDVQQRAWRSNRRRQEGLRSICMHTKKRVSSFRGNKIGLKDV 142

Query: 126 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK 185
           ITLRRHVETKVRAKIRKRKVTTKIN HDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK
Sbjct: 143 ITLRRHVETKVRAKIRKRKVTTKINHHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK 202

Query: 186 IPPSARKPLCNWVSL 200
           IPPSARK LCNWV +
Sbjct: 203 IPPSARKALCNWVRM 217


>gi|157074225 nuclear pore complex interacting protein-like 3 [Homo
           sapiens]
          Length = 678

 Score =  233 bits (594), Expect = 1e-61
 Identities = 129/195 (66%), Positives = 134/195 (68%), Gaps = 35/195 (17%)

Query: 23  VINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLRRDTFTILFCTSYL 82
           VIN+LA + HR TDFG      P  H              +II F       I     YL
Sbjct: 41  VINTLADHHHRGTDFG----GSPWLH--------------VIIAFPTSYKVVITLWIVYL 82

Query: 83  CVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQ-----------------KGNKIGLKDV 125
            VS LKTIFWSRNGHDGSTDVQQRAWRSNR RQ                 +GNKIGLKDV
Sbjct: 83  WVSLLKTIFWSRNGHDGSTDVQQRAWRSNRRRQEGLRSICMHTKKRVSSFRGNKIGLKDV 142

Query: 126 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK 185
           ITLRRHVETKVRAKIRKRKVTTKIN HDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK
Sbjct: 143 ITLRRHVETKVRAKIRKRKVTTKINHHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK 202

Query: 186 IPPSARKPLCNWVSL 200
           IPPSARK LCNWV +
Sbjct: 203 IPPSARKALCNWVRM 217


>gi|239745475 PREDICTED: similar to NPIP-like protein
           ENSP00000283050 isoform 1 [Homo sapiens]
          Length = 385

 Score =  219 bits (558), Expect = 2e-57
 Identities = 124/202 (61%), Positives = 132/202 (65%), Gaps = 42/202 (20%)

Query: 70  RDTFTILFCTSYLCVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLR 129
           R  FT+      + VSFLKTIFWSRNGHDGS DVQQRAWRSNRSRQKGNKIGLKDVITLR
Sbjct: 22  RRGFTMFARIVSISVSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGNKIGLKDVITLR 81

Query: 130 RHVETKVRAKIRKRKVTTKINRHDKINGKRKTARK------------------------- 164
           RHVETKVRAKIRKRKVTTKINRHDKINGKRKTARK                         
Sbjct: 82  RHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKHIRKLSMKECEHAEKERQVSEAEEN 141

Query: 165 -----------QKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVSLLVFLAFEHSLPGQ 213
                      +KMFQRAQELRRRAEDYHKCKIPPSARKPLCNWV +    A EH     
Sbjct: 142 GKLDMKEIHTYKKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVRM---AAAEHR---H 195

Query: 214 DMDTFFSLQLCAQALQREMAER 235
                + L L A+ L+  M  +
Sbjct: 196 SSGLPYWLYLTAETLKNRMGRQ 217


>gi|239745469 PREDICTED: nuclear pore complex interacting
           protein-like 1 [Homo sapiens]
          Length = 371

 Score =  218 bits (554), Expect = 6e-57
 Identities = 121/188 (64%), Positives = 127/188 (67%), Gaps = 42/188 (22%)

Query: 84  VSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRKR 143
           VSFLKTIFWSRNGHDGS DVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRKR
Sbjct: 22  VSFLKTIFWSRNGHDGSMDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRKR 81

Query: 144 KVTTKINRHDKINGKRKTARK------------------------------------QKM 167
           KVTTKINRHDKINGKRKTARK                                    +KM
Sbjct: 82  KVTTKINRHDKINGKRKTARKHIRKLSMKECEHAEKERQVSEAEENGKLDMKEIHTYKKM 141

Query: 168 FQRAQELRRRAEDYHKCKIPPSARKPLCNWVSLLVFLAFEHSLPGQDMDTFFSLQLCAQA 227
           FQRAQELRRRAEDYHKCKIPPSARKPLCNWV +    A EH          + L L A+ 
Sbjct: 142 FQRAQELRRRAEDYHKCKIPPSARKPLCNWVRM---AAAEHC---HSSGLPYWLYLTAET 195

Query: 228 LQREMAER 235
           L+  M  +
Sbjct: 196 LKNRMGRQ 203


>gi|169212906 PREDICTED: NPIP-like protein ENSP00000283050 isoform 3
           [Homo sapiens]
          Length = 363

 Score =  213 bits (543), Expect = 1e-55
 Identities = 126/227 (55%), Positives = 135/227 (59%), Gaps = 54/227 (23%)

Query: 10  WLLLGFISHQPTPVINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLR 69
           WL  G  +     VIN+LA + H     G G R  P  H               II F R
Sbjct: 9   WLSGGCKTWHSAWVINTLADHHH----CGTGFRGSPWLH--------------FIIAFPR 50

Query: 70  RDTFTILFCTSYLCVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLR 129
                I+  T YL +S LKTI WSRNGHDGSTDVQQRAWRSNR RQ+GNKIGLKDVITL 
Sbjct: 51  SYKVFIILWTVYLWMSLLKTILWSRNGHDGSTDVQQRAWRSNRCRQEGNKIGLKDVITLW 110

Query: 130 RHVETKVRAKIRKRKVTTKINRHDKINGKRKTARK------------------------- 164
           RHVETKVRAKIRKRKVTTKIN HDKINGKRKTA+                          
Sbjct: 111 RHVETKVRAKIRKRKVTTKINHHDKINGKRKTAKNHIRKLSMKECEHAEKERQVSEAEEN 170

Query: 165 -----------QKMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVSL 200
                      +KMFQRAQELRRRAEDYHK KIPPSARKPLCNWV +
Sbjct: 171 GKLDMKEIHTYKKMFQRAQELRRRAEDYHKRKIPPSARKPLCNWVRM 217


>gi|239745414 PREDICTED: NPIP-like protein 2 isoform 2 [Homo
           sapiens]
          Length = 380

 Score =  210 bits (534), Expect = 1e-54
 Identities = 127/225 (56%), Positives = 136/225 (60%), Gaps = 52/225 (23%)

Query: 10  WLLLGFISHQPTPVINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLR 69
           WL  G  +     VIN+LA + HR TDFG              SP      + III F R
Sbjct: 9   WLSGGCKTWHSAWVINTLADHHHRGTDFG-------------GSPW-----LRIIIAFPR 50

Query: 70  RDTFTILFCTSYLCVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLR 129
                +   T YL +SFLKTIF S NGHD STDVQQRA RSNR RQ+GNKIGLKDVITLR
Sbjct: 51  SYKVVLTLWTVYLWLSFLKTIFQSENGHDVSTDVQQRARRSNRRRQEGNKIGLKDVITLR 110

Query: 130 RHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQK----------------------- 166
           RHVETK RAKIRK KVTTKIN HDKINGKRKTA+KQK                       
Sbjct: 111 RHVETKGRAKIRKMKVTTKINHHDKINGKRKTAKKQKLSVKECEHAEKERQVSEAEENGK 170

Query: 167 -----------MFQRAQELRRRAEDYHKCKIPPSARKPLCNWVSL 200
                      MFQRAQELRRRAEDYHKCKIPPSARK LCNWV +
Sbjct: 171 LDMKEIHTYMKMFQRAQELRRRAEDYHKCKIPPSARKALCNWVRM 215


>gi|148596994 nuclear pore complex interacting protein [Homo
           sapiens]
          Length = 350

 Score =  202 bits (515), Expect = 2e-52
 Identities = 125/235 (53%), Positives = 141/235 (60%), Gaps = 57/235 (24%)

Query: 10  WLLLGFISHQPTPVINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLR 69
           WL  G  +     VIN+LA +RHR TDFG              SP      ++II  FLR
Sbjct: 9   WLSGGCKTWHSAWVINTLADHRHRGTDFG-------------GSPW-----LLIITVFLR 50

Query: 70  RDTFTILFCTSYLCVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLR 129
              F I  CTSYLCVSFLKTIF S+NGHDGSTDVQQRA RSNR RQ+G KI L+D+ TL 
Sbjct: 51  SYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNRRRQEGIKIVLEDIFTLW 110

Query: 130 RHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQ------------------------ 165
           R VETKVRAKIRK KVTTK+NRHDKINGKRKTA++                         
Sbjct: 111 RQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEEN 170

Query: 166 ------------KMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVSLLVFLAFEH 208
                       +MFQRAQ LRRRAEDY++CKI PSARKPLCN V +    A EH
Sbjct: 171 GKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRM---AAVEH 222


>gi|193290184 hypothetical protein LOC339047 [Homo sapiens]
          Length = 369

 Score =  199 bits (507), Expect = 2e-51
 Identities = 124/235 (52%), Positives = 140/235 (59%), Gaps = 57/235 (24%)

Query: 10  WLLLGFISHQPTPVINSLAVYRHRETDFGVGVRDHPGQHGKTPSPQKLDNLIIIIIGFLR 69
           WL  G  +     VIN+LA +RHR TDFG              SP      ++II  FLR
Sbjct: 9   WLSGGCKTWHSAWVINTLADHRHRGTDFG-------------GSPW-----LLIITVFLR 50

Query: 70  RDTFTILFCTSYLCVSFLKTIFWSRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLR 129
              F I  CTSYLCVSFLKTIF S+NGHDGSTDVQQRA RSN  RQ+G KI L+D+ TL 
Sbjct: 51  SYKFAISLCTSYLCVSFLKTIFPSQNGHDGSTDVQQRARRSNCRRQEGIKIVLEDIFTLW 110

Query: 130 RHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQ------------------------ 165
           R VETKVRAKIRK KVTTK+NRHDKINGKRKTA++                         
Sbjct: 111 RQVETKVRAKIRKMKVTTKVNRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEEN 170

Query: 166 ------------KMFQRAQELRRRAEDYHKCKIPPSARKPLCNWVSLLVFLAFEH 208
                       +MFQRAQ LRRRAEDY++CKI PSARKPLCN V +    A EH
Sbjct: 171 GKLDMKEIHTYMEMFQRAQALRRRAEDYYRCKITPSARKPLCNRVRM---AAVEH 222


>gi|4506609 ribosomal protein L19 [Homo sapiens]
          Length = 196

 Score = 33.1 bits (74), Expect = 0.26
 Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 2/64 (3%)

Query: 113 SRQKGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQ 172
           SRQ+  K+ +KD + +R+ V    RA+ RK  +  +  RH  I GKRK     +M ++  
Sbjct: 37  SRQQIRKL-IKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGI-GKRKGTANARMPEKVT 94

Query: 173 ELRR 176
            +RR
Sbjct: 95  WMRR 98


>gi|13129104 coiled-coil domain containing 86 [Homo sapiens]
          Length = 360

 Score = 32.7 bits (73), Expect = 0.34
 Identities = 24/88 (27%), Positives = 52/88 (59%), Gaps = 6/88 (6%)

Query: 106 RAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQ 165
           R W+ +RS+++ +++ L+D   LR   + K++ + ++RK+     RH  +  +++  R++
Sbjct: 244 RVWK-DRSKKRFSQM-LQDK-PLRTSWQRKMKER-QERKLAKDFARH--LEEEKERRRQE 297

Query: 166 KMFQRAQELRRRAEDYHKCKIPPSARKP 193
           K  +RA+ L+RR E+  K ++    R P
Sbjct: 298 KKQRRAENLKRRLENERKAEVVQVIRNP 325


>gi|239750213 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 248

 Score = 32.3 bits (72), Expect = 0.44
 Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 5/97 (5%)

Query: 104 QQRAWRSNRSRQKGNKIGLKDVITLRRHVET----KVRAKIRKRKVTTKINRHDKINGKR 159
           ++ AW+  R ++K  K   K   T+++  +T    K   K +KR  TTK         K 
Sbjct: 19  KESAWKRGR-KKKTTKKKKKKKTTMKKKKKTTTKKKTTTKTKKRTTTTKKTTTTTTKEKE 77

Query: 160 KTARKQKMFQRAQELRRRAEDYHKCKIPPSARKPLCN 196
           K   K+K  ++ +E  +  E   K K     +K   N
Sbjct: 78  KEKEKEKEKEKEKEKEKEKEKKKKKKKKKKKKKKKLN 114


>gi|144953913 zinc finger protein 714 [Homo sapiens]
          Length = 555

 Score = 32.3 bits (72), Expect = 0.44
 Identities = 13/18 (72%), Positives = 15/18 (83%)

Query: 40  GVRDHPGQHGKTPSPQKL 57
           GV+D PGQHGKTPS  K+
Sbjct: 527 GVQDQPGQHGKTPSLLKI 544


>gi|239835767 developmental pluripotency associated 2 [Homo sapiens]
          Length = 298

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 3/65 (4%)

Query: 126 ITLRRHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHKCK 185
           + L RH   + R  + +    T++ R  +   KRK   K+   QR+ E+  RAE+ +  +
Sbjct: 120 LRLHRHAYPEQRQDMPEMSQETRLQRCSR---KRKAVTKRARLQRSYEMNERAEETNTVE 176

Query: 186 IPPSA 190
           +  SA
Sbjct: 177 VITSA 181


>gi|147903302 MAP7 domain containing 3 [Homo sapiens]
          Length = 876

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 24/103 (23%), Positives = 45/103 (43%), Gaps = 17/103 (16%)

Query: 98  DGS---TDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRHDK 154
           DGS    D++QR  R  R  ++  +   K+   L +  +TK++ + +  +   K+    +
Sbjct: 59  DGSMLKNDIKQRLARERREEKRRQQDANKETQLLEKERKTKLQYEKQMEERQRKLKERKE 118

Query: 155 INGKRKTARKQKMFQ--------------RAQELRRRAEDYHK 183
              +R+ A ++K  Q              R  E RR A+DY +
Sbjct: 119 KEEQRRIAAEEKRHQKDEAQKEKFTAILYRTLERRRLADDYQQ 161


>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
          Length = 494

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 25/92 (27%), Positives = 44/92 (47%), Gaps = 6/92 (6%)

Query: 93  SRNGHDGSTDVQQRAWRSNRSRQKGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRH 152
           SR+G    +  + R+   +RS+++ ++   K+    R H   K R+K  K +   KI  +
Sbjct: 222 SRSGSRSRSKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSAGKSRSK-SKDQAEEKIQNN 280

Query: 153 DKINGKRK----TARKQKMFQRAQELRRRAED 180
           D + GK K    +  K K   R++   RR E+
Sbjct: 281 DNV-GKPKSRSPSRHKSKSKSRSRSQERRVEE 311


>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
           sapiens]
          Length = 1939

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 13/49 (26%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 132 VETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAED 180
           ++TK++ + + ++VT +    ++IN +  TA+K+K+     EL++  +D
Sbjct: 913 IKTKIQLEAKIKEVTERAEDEEEINAE-LTAKKRKLEDECSELKKDIDD 960


>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
           sapiens]
          Length = 1941

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 13/49 (26%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 132 VETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAED 180
           ++TK++ + + ++VT +    ++IN +  TA+K+K+     EL++  +D
Sbjct: 915 IKTKIQLEAKIKEVTERAEDEEEINAE-LTAKKRKLEDECSELKKDIDD 962


>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
           sapiens]
          Length = 1941

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 13/49 (26%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 132 VETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAED 180
           ++TK++ + + ++VT +    ++IN +  TA+K+K+     EL++  +D
Sbjct: 915 IKTKIQLEAKIKEVTERAEDEEEINAE-LTAKKRKLEDECSELKKDIDD 962


>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
           sapiens]
          Length = 1939

 Score = 29.6 bits (65), Expect = 2.8
 Identities = 13/49 (26%), Positives = 31/49 (63%), Gaps = 1/49 (2%)

Query: 132 VETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAED 180
           ++TK++ + + ++VT +    ++IN +  TA+K+K+     EL++  +D
Sbjct: 913 IKTKIQLEAKIKEVTERAEDEEEINAE-LTAKKRKLEDECSELKKDIDD 960


>gi|157364937 OTU domain containing 6B [Homo sapiens]
          Length = 323

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 10/79 (12%)

Query: 112 RSRQKGNKIGLKDVITLRRHVETKVRAKIRKRKVTTKINRHDKI----------NGKRKT 161
           ++ +K  K   +DV  L + +E K R ++ + K+TTK N+ D +          N   + 
Sbjct: 69  KNDKKRRKQLTEDVAKLEKEMEQKHREELEQLKLTTKENKIDSVAVNISNLVLENQPPRI 128

Query: 162 ARKQKMFQRAQELRRRAED 180
           ++ QK  ++   L +  E+
Sbjct: 129 SKAQKRREKKAALEKEREE 147


>gi|41152097 DNA segment on chromosome X and Y (unique) 155
           expressed sequence isoform 1 [Homo sapiens]
          Length = 695

 Score = 28.9 bits (63), Expect = 4.8
 Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 3/54 (5%)

Query: 130 RHVETKVRAKIRKRKVTTKINRHDKINGKRKTARKQKMFQRAQELRRRAEDYHK 183
           +  E + RA+ RK+K   ++ R  K   + +  RK++  QR +ELRR  +   K
Sbjct: 293 KEAEERQRAEERKQKELEELERERK---REEKLRKREQKQRDRELRRNQKKLEK 343


>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 275

 Score = 28.5 bits (62), Expect = 6.3
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)

Query: 109 RSNRSRQKGNKIGLKDVITLRRHVETKVRA----KIRKRKVTTKINRHDKINGKRKTARK 164
           +    +Q+G +   K      R  E K R     K R++K   K  + +K  GKR+  RK
Sbjct: 102 KKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERKRK 161

Query: 165 QKMFQRAQELRRR 177
           ++  +  ++ R R
Sbjct: 162 KRKKEEREKKRER 174


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.326    0.139    0.440 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,983,588
Number of Sequences: 37866
Number of extensions: 480229
Number of successful extensions: 1811
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 1715
Number of HSP's gapped (non-prelim): 95
length of query: 265
length of database: 18,247,518
effective HSP length: 100
effective length of query: 165
effective length of database: 14,460,918
effective search space: 2386051470
effective search space used: 2386051470
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.