LOC401859 18477

Name: LOC401859	Sequence: fasta or formatted (163aa)		NCBI GI: 239745605
Description: PREDICTED: similar to TRIMCyp		Referenced in: Peptidylprolyl Isomerases
Other entries for this name: alt prot [166aa] PREDICTED: similar to TRIMCyp alt prot [166aa] PREDICTED: similar to TRIMCyp
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.5 9 1 C cysteine 3.7 6 1 D aspartate 3.1 5 2 E glutamate 4.9 8 1 F phenylalanine 6.1 10 2 G glycine 14.1 23 3 H histidine 3.7 6 1 I isoleucine 6.1 10 2 K lysine 9.2 15 1 L leucine 5.5 9 1 M methionine 4.3 7 1 N asparagine 6.7 11 2 P proline 3.1 5 1 Q glutamine 2.5 4 1 R arginine 1.8 3 1 S serine 5.5 9 2 T threonine 8.0 13 2 V valine 3.7 6 2 W tryptophan 0.6 1 1 Y tyrosine 1.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TRIMCyp LOC401859 0.875 PREDICTED: similar to TRIMCyp LOC401859 0.875 PREDICTED: similar to TRIMCyp PPIA 0.697 peptidylprolyl isomerase A LOC643997 0.666 PREDICTED: similar to TRIMCyp isoform 1 LOC643997 0.666 PREDICTED: similar to TRIMCyp isoform 2 LOC643997 0.666 PREDICTED: similar to peptidylprolyl isomerase A iso... LOC342541 0.641 PREDICTED: similar to TRIMCyp LOC342541 0.641 PREDICTED: similar to TRIMCyp LOC342541 0.641 PREDICTED: similar to TRIMCyp LOC650157 0.634 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 0.625 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 0.625 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC131055 0.616 PREDICTED: similar to TRIMCyp LOC131055 0.616 PREDICTED: similar to TRIMCyp LOC131055 0.616 PREDICTED: similar to TRIMCyp PPIAL4B 0.609 peptidylprolyl isomerase A (cyclophilin A)-like 4B ... PPIAL4A 0.609 peptidylprolyl isomerase A-like 4A PPIAL4C 0.609 peptidylprolyl isomerase A (cyclophilin A)-like 4C ... PPIAL4G 0.609 peptidylprolyl isomerase A (cyclophilin A)-like 4G ... LOC390956 0.606 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC390956 0.606 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC390956 0.606 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... PPIAL4E 0.603 peptidylprolyl isomerase A (cyclophilin A)-like 4E ... LOC392352 0.594 PREDICTED: similar to TRIMCyp LOC392352 0.594 PREDICTED: similar to TRIMCyp LOC392352 0.594 PREDICTED: similar to TRIMCyp LOC126170 0.588 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.588 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.588 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.