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Search of human proteins with 239745320
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745320 PREDICTED: hypothetical protein XP_002343437 [Homo
sapiens]
(923 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239750922 PREDICTED: hypothetical protein [Homo sapiens] 1924 0.0
gi|239745320 PREDICTED: hypothetical protein XP_002343437 [Homo ... 1924 0.0
gi|14149904 anthrax toxin receptor 1 isoform 1 precursor [Homo s... 42 0.003
gi|226498192 atonal homolog 8 [Homo sapiens] 38 0.038
gi|113429443 PREDICTED: transmembrane protein 46-like [Homo sapi... 38 0.050
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 37 0.11
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 37 0.11
gi|150170670 piccolo isoform 2 [Homo sapiens] 36 0.14
gi|150378539 piccolo isoform 1 [Homo sapiens] 36 0.14
gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo ... 36 0.19
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 36 0.19
gi|15451844 ADAM metallopeptidase domain 19 preproprotein [Homo ... 35 0.25
gi|67782330 trinucleotide repeat containing 6B isoform 3 [Homo s... 35 0.32
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 35 0.32
gi|27262667 colony stimulating factor 1 isoform a precursor [Hom... 35 0.42
gi|27262663 colony stimulating factor 1 isoform b precursor [Hom... 35 0.42
gi|27262661 colony stimulating factor 1 isoform a precursor [Hom... 35 0.42
gi|239749931 PREDICTED: FLJ43861 protein [Homo sapiens] 35 0.42
gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo sap... 35 0.42
gi|239744140 PREDICTED: hypothetical protein [Homo sapiens] 35 0.42
gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo sap... 35 0.42
gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo ... 34 0.55
gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo ... 34 0.55
gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo ... 34 0.55
gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo ... 34 0.55
gi|40353727 synaptopodin isoform A [Homo sapiens] 34 0.55
gi|207442670 double homeobox, 5 [Homo sapiens] 34 0.55
gi|152963637 zinc finger protein 787 [Homo sapiens] 34 0.55
gi|113430659 PREDICTED: hypothetical protein [Homo sapiens] 34 0.72
gi|113430177 PREDICTED: hypothetical protein [Homo sapiens] 34 0.72
>gi|239750922 PREDICTED: hypothetical protein [Homo sapiens]
Length = 923
Score = 1924 bits (4983), Expect = 0.0
Identities = 923/923 (100%), Positives = 923/923 (100%)
Query: 1 MFSTTTAPRCCSSWLELRSRACRISSQCVALTTWGMRLQSVGRMEVSMAKPPAAARCSSS 60
MFSTTTAPRCCSSWLELRSRACRISSQCVALTTWGMRLQSVGRMEVSMAKPPAAARCSSS
Sbjct: 1 MFSTTTAPRCCSSWLELRSRACRISSQCVALTTWGMRLQSVGRMEVSMAKPPAAARCSSS 60
Query: 61 SSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMSASKFCRPEQ 120
SSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMSASKFCRPEQ
Sbjct: 61 SSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMSASKFCRPEQ 120
Query: 121 LREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSP 180
LREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSP
Sbjct: 121 LREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSP 180
Query: 181 GKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPD 240
GKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPD
Sbjct: 181 GKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPD 240
Query: 241 RHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHV 300
RHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHV
Sbjct: 241 RHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHV 300
Query: 301 GIKGQVSQALHCPAPSACVDLVIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN 360
GIKGQVSQALHCPAPSACVDLVIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN
Sbjct: 301 GIKGQVSQALHCPAPSACVDLVIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN 360
Query: 361 VQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRV 420
VQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRV
Sbjct: 361 VQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRV 420
Query: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSY 480
EPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSY
Sbjct: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSY 480
Query: 481 TDKSAPSPSRPPPRACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGSVSFHV 540
TDKSAPSPSRPPPRACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGSVSFHV
Sbjct: 481 TDKSAPSPSRPPPRACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGSVSFHV 540
Query: 541 AQRSPLQVELRGMWGEDRCFSHSQILMGWRNPGLSAPGRKTSFHRVHSHNRLMEGQAHRL 600
AQRSPLQVELRGMWGEDRCFSHSQILMGWRNPGLSAPGRKTSFHRVHSHNRLMEGQAHRL
Sbjct: 541 AQRSPLQVELRGMWGEDRCFSHSQILMGWRNPGLSAPGRKTSFHRVHSHNRLMEGQAHRL 600
Query: 601 TTSARMRMLSFSLHLYRSFSSETPLAVMNEARLALPAAWIRASTATSCSSSCSEAHRAIT 660
TTSARMRMLSFSLHLYRSFSSETPLAVMNEARLALPAAWIRASTATSCSSSCSEAHRAIT
Sbjct: 601 TTSARMRMLSFSLHLYRSFSSETPLAVMNEARLALPAAWIRASTATSCSSSCSEAHRAIT 660
Query: 661 LSMTPLSSKARLPASHGPCRRQDTVWMAPASLVPKKLAWLAQPHPFHDSNVQKTPDLLPL 720
LSMTPLSSKARLPASHGPCRRQDTVWMAPASLVPKKLAWLAQPHPFHDSNVQKTPDLLPL
Sbjct: 661 LSMTPLSSKARLPASHGPCRRQDTVWMAPASLVPKKLAWLAQPHPFHDSNVQKTPDLLPL 720
Query: 721 THNDGTFFASEAFFDTFLEGIKHNLQQVAGSQGHSLAFHAQDGDYSPSSHALLFWVQQYL 780
THNDGTFFASEAFFDTFLEGIKHNLQQVAGSQGHSLAFHAQDGDYSPSSHALLFWVQQYL
Sbjct: 721 THNDGTFFASEAFFDTFLEGIKHNLQQVAGSQGHSLAFHAQDGDYSPSSHALLFWVQQYL 780
Query: 781 KHLFHFGIRRGHQGLRRCWSAFSEGRYPVSYEATHSQWCHLHCGSVNGLPMALNSAFIPP 840
KHLFHFGIRRGHQGLRRCWSAFSEGRYPVSYEATHSQWCHLHCGSVNGLPMALNSAFIPP
Sbjct: 781 KHLFHFGIRRGHQGLRRCWSAFSEGRYPVSYEATHSQWCHLHCGSVNGLPMALNSAFIPP 840
Query: 841 ARELADRKVHLPPGSRLENCVYTPGPDPFTTSQCFHLSGSLTYLLLNLAPDVPQGLLENF 900
ARELADRKVHLPPGSRLENCVYTPGPDPFTTSQCFHLSGSLTYLLLNLAPDVPQGLLENF
Sbjct: 841 ARELADRKVHLPPGSRLENCVYTPGPDPFTTSQCFHLSGSLTYLLLNLAPDVPQGLLENF 900
Query: 901 VLGLQAHTSLQVKDSLVQAAQLL 923
VLGLQAHTSLQVKDSLVQAAQLL
Sbjct: 901 VLGLQAHTSLQVKDSLVQAAQLL 923
>gi|239745320 PREDICTED: hypothetical protein XP_002343437 [Homo
sapiens]
Length = 923
Score = 1924 bits (4983), Expect = 0.0
Identities = 923/923 (100%), Positives = 923/923 (100%)
Query: 1 MFSTTTAPRCCSSWLELRSRACRISSQCVALTTWGMRLQSVGRMEVSMAKPPAAARCSSS 60
MFSTTTAPRCCSSWLELRSRACRISSQCVALTTWGMRLQSVGRMEVSMAKPPAAARCSSS
Sbjct: 1 MFSTTTAPRCCSSWLELRSRACRISSQCVALTTWGMRLQSVGRMEVSMAKPPAAARCSSS 60
Query: 61 SSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMSASKFCRPEQ 120
SSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMSASKFCRPEQ
Sbjct: 61 SSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMSASKFCRPEQ 120
Query: 121 LREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSP 180
LREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSP
Sbjct: 121 LREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSP 180
Query: 181 GKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPD 240
GKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPD
Sbjct: 181 GKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPD 240
Query: 241 RHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHV 300
RHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHV
Sbjct: 241 RHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHV 300
Query: 301 GIKGQVSQALHCPAPSACVDLVIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN 360
GIKGQVSQALHCPAPSACVDLVIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN
Sbjct: 301 GIKGQVSQALHCPAPSACVDLVIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN 360
Query: 361 VQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRV 420
VQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRV
Sbjct: 361 VQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRV 420
Query: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSY 480
EPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSY
Sbjct: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSY 480
Query: 481 TDKSAPSPSRPPPRACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGSVSFHV 540
TDKSAPSPSRPPPRACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGSVSFHV
Sbjct: 481 TDKSAPSPSRPPPRACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGSVSFHV 540
Query: 541 AQRSPLQVELRGMWGEDRCFSHSQILMGWRNPGLSAPGRKTSFHRVHSHNRLMEGQAHRL 600
AQRSPLQVELRGMWGEDRCFSHSQILMGWRNPGLSAPGRKTSFHRVHSHNRLMEGQAHRL
Sbjct: 541 AQRSPLQVELRGMWGEDRCFSHSQILMGWRNPGLSAPGRKTSFHRVHSHNRLMEGQAHRL 600
Query: 601 TTSARMRMLSFSLHLYRSFSSETPLAVMNEARLALPAAWIRASTATSCSSSCSEAHRAIT 660
TTSARMRMLSFSLHLYRSFSSETPLAVMNEARLALPAAWIRASTATSCSSSCSEAHRAIT
Sbjct: 601 TTSARMRMLSFSLHLYRSFSSETPLAVMNEARLALPAAWIRASTATSCSSSCSEAHRAIT 660
Query: 661 LSMTPLSSKARLPASHGPCRRQDTVWMAPASLVPKKLAWLAQPHPFHDSNVQKTPDLLPL 720
LSMTPLSSKARLPASHGPCRRQDTVWMAPASLVPKKLAWLAQPHPFHDSNVQKTPDLLPL
Sbjct: 661 LSMTPLSSKARLPASHGPCRRQDTVWMAPASLVPKKLAWLAQPHPFHDSNVQKTPDLLPL 720
Query: 721 THNDGTFFASEAFFDTFLEGIKHNLQQVAGSQGHSLAFHAQDGDYSPSSHALLFWVQQYL 780
THNDGTFFASEAFFDTFLEGIKHNLQQVAGSQGHSLAFHAQDGDYSPSSHALLFWVQQYL
Sbjct: 721 THNDGTFFASEAFFDTFLEGIKHNLQQVAGSQGHSLAFHAQDGDYSPSSHALLFWVQQYL 780
Query: 781 KHLFHFGIRRGHQGLRRCWSAFSEGRYPVSYEATHSQWCHLHCGSVNGLPMALNSAFIPP 840
KHLFHFGIRRGHQGLRRCWSAFSEGRYPVSYEATHSQWCHLHCGSVNGLPMALNSAFIPP
Sbjct: 781 KHLFHFGIRRGHQGLRRCWSAFSEGRYPVSYEATHSQWCHLHCGSVNGLPMALNSAFIPP 840
Query: 841 ARELADRKVHLPPGSRLENCVYTPGPDPFTTSQCFHLSGSLTYLLLNLAPDVPQGLLENF 900
ARELADRKVHLPPGSRLENCVYTPGPDPFTTSQCFHLSGSLTYLLLNLAPDVPQGLLENF
Sbjct: 841 ARELADRKVHLPPGSRLENCVYTPGPDPFTTSQCFHLSGSLTYLLLNLAPDVPQGLLENF 900
Query: 901 VLGLQAHTSLQVKDSLVQAAQLL 923
VLGLQAHTSLQVKDSLVQAAQLL
Sbjct: 901 VLGLQAHTSLQVKDSLVQAAQLL 923
>gi|14149904 anthrax toxin receptor 1 isoform 1 precursor [Homo
sapiens]
Length = 564
Score = 42.0 bits (97), Expect = 0.003
Identities = 27/73 (36%), Positives = 31/73 (42%), Gaps = 7/73 (9%)
Query: 422 PSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYT 481
P N + S PPA P P S+ TP + S P TLP PP +
Sbjct: 496 PLNNAYHTSSPPPAPIYTPPPPAPHCPP-------PPPSAPTPPIPSPPSTLPPPPQAPP 548
Query: 482 DKSAPSPSRPPPR 494
AP PSRPPPR
Sbjct: 549 PNRAPPPSRPPPR 561
>gi|226498192 atonal homolog 8 [Homo sapiens]
Length = 321
Score = 38.1 bits (87), Expect = 0.038
Identities = 33/128 (25%), Positives = 44/128 (34%), Gaps = 13/128 (10%)
Query: 385 PQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSV----------PP 434
P P P P+ + P GG G+ R S + CF L +V PP
Sbjct: 73 PVPVPVPVAPAVPPRGGTDTAGERGGSRAPEVS---DARKRCFALGAVGPGLPTPPPPPP 129
Query: 435 AEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRPPPR 494
P Q+P A+P G R + P P P PP P+P P
Sbjct: 130 PAPQSQAPGGPEAQPFREPGLRPRILLCAPPARPAPSAPPAPPAPPESTVRPAPPTRPGE 189
Query: 495 ACGKKISY 502
+ IS+
Sbjct: 190 SSYSSISH 197
>gi|113429443 PREDICTED: transmembrane protein 46-like [Homo
sapiens]
Length = 492
Score = 37.7 bits (86), Expect = 0.050
Identities = 41/163 (25%), Positives = 60/163 (36%), Gaps = 24/163 (14%)
Query: 326 PPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQRAGRRRP 385
PPG + + SG G+RRG G N+G G + + PD + G P
Sbjct: 281 PPGSHRTA---SGRGLRRGDSEG-GVNRGIG-----PSRVSLLAPDKKRLNNAPRGSAAP 331
Query: 386 QPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPSLQSPWRK 445
PP P +P + F+ A+L+ +A + P EPS + P +
Sbjct: 332 GPPRGPRLQGGGSLTLQPDYAKYATFK--AAALKAAEAAPRDFCQRFPALEPSPRQPPAR 389
Query: 446 RARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSP 488
RP +P L + PW P Y +AP P
Sbjct: 390 APRP-------------SPDLPAPLDACPWAPPVYAPPAAPGP 419
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 36.6 bits (83), Expect = 0.11
Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 19/159 (11%)
Query: 336 PSGLGVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLE 395
PSG G + TP NQ HP Q ++ Q P +P +Q + +++PQ P L
Sbjct: 459 PSGYGQQGQTPY---YNQQSPHPQQQQPPYSQQPPSQTP-HAQPSYQQQPQSQPPQLQSS 514
Query: 396 IYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPP-AEPSLQSPWRKRARPVGLWG 454
P +P Q + A + S +S PP ++P QSP+
Sbjct: 515 QPPYSQQPSQ---PPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPY----------- 560
Query: 455 RRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRPPP 493
++Q+ P S P P + ++A S R PP
Sbjct: 561 QQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPP 599
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 36.6 bits (83), Expect = 0.11
Identities = 41/159 (25%), Positives = 63/159 (39%), Gaps = 19/159 (11%)
Query: 336 PSGLGVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQRAGRRRPQPPPRPLCLE 395
PSG G + TP NQ HP Q ++ Q P +P +Q + +++PQ P L
Sbjct: 459 PSGYGQQGQTPY---YNQQSPHPQQQQPPYSQQPPSQTP-HAQPSYQQQPQSQPPQLQSS 514
Query: 396 IYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPP-AEPSLQSPWRKRARPVGLWG 454
P +P Q + A + S +S PP ++P QSP+
Sbjct: 515 QPPYSQQPSQ---PPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPY----------- 560
Query: 455 RRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRPPP 493
++Q+ P S P P + ++A S R PP
Sbjct: 561 QQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYSQQRFPP 599
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 36.2 bits (82), Expect = 0.14
Identities = 77/348 (22%), Positives = 119/348 (34%), Gaps = 58/348 (16%)
Query: 170 GRGRKTRTRSPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTA------ 223
G G + T P + + L + R A +V SRA G+ P A
Sbjct: 28 GAGSPSHTAIPAGMEADLSQLSEEERRQIA-----AVMSRAQGLPKGSVPPAAAESPSMH 82
Query: 224 --QDIPGSKTPTIGLPSPDRHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPA 281
Q++ S P PD R G+ +T ++ + P + S +
Sbjct: 83 RKQELDSSHPPKQSGRPPDPGRPAQPGLSKSRTTDTFRSEQKLPGRSPSTISLKESKSRT 142
Query: 282 ELEQSFQSSRILHKLFLHVGIKGQVSQALHCPAPSACVDLVIAQPPGDTQ-------DSG 334
+L++ +SS ++ V VS ++ P + A T+ + G
Sbjct: 143 DLKEEHKSS-MMPGFLSEVNALSAVSSVVNKFNPFDLISDSEASQEETTKKQKVVQKEQG 201
Query: 335 RPSGL---GVRRGTPRPRGKNQGFGH-PLNVQKQFTYQDPDCSPCLSQRAGRRRPQPPPR 390
+P G+ +++ P+P K QG G PL QD SQ+ + + QPP
Sbjct: 202 KPEGIIKPPLQQQPPKPIPKQQGPGRDPLQ-------QDGTPKSISSQQPEKIKSQPPGT 254
Query: 391 PLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPSLQSPWRKRARPV 450
P G Q Q H + L P + +PSL SP
Sbjct: 255 GK-----PIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSP-------- 301
Query: 451 GLWGRRQELSSSTPGLDSLPGTLP-WPPGSYTDKSAPSPSRPPPRACG 497
S P PG P PG +KS P P++PP + G
Sbjct: 302 ----------SKPPIQQPTPGKPPAQQPGH--EKSQPGPAKPPAQPSG 337
Score = 30.4 bits (67), Expect = 7.9
Identities = 39/179 (21%), Positives = 58/179 (32%), Gaps = 17/179 (9%)
Query: 327 PGDTQDSGRPSGL--------GVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQ 378
PG + +PSGL G + +P G + PL K Q P Q
Sbjct: 326 PGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQ 385
Query: 379 RAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPS 438
+ QPP P +P Q+ + ++ A P +P
Sbjct: 386 PGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPG 445
Query: 439 LQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRPPPRACG 497
P + A+ G + + T LPG PP P P++PPP+ G
Sbjct: 446 ---PGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPP------QQPGPAKPPPQQPG 495
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 36.2 bits (82), Expect = 0.14
Identities = 77/348 (22%), Positives = 119/348 (34%), Gaps = 58/348 (16%)
Query: 170 GRGRKTRTRSPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTA------ 223
G G + T P + + L + R A +V SRA G+ P A
Sbjct: 28 GAGSPSHTAIPAGMEADLSQLSEEERRQIA-----AVMSRAQGLPKGSVPPAAAESPSMH 82
Query: 224 --QDIPGSKTPTIGLPSPDRHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPA 281
Q++ S P PD R G+ +T ++ + P + S +
Sbjct: 83 RKQELDSSHPPKQSGRPPDPGRPAQPGLSKSRTTDTFRSEQKLPGRSPSTISLKESKSRT 142
Query: 282 ELEQSFQSSRILHKLFLHVGIKGQVSQALHCPAPSACVDLVIAQPPGDTQ-------DSG 334
+L++ +SS ++ V VS ++ P + A T+ + G
Sbjct: 143 DLKEEHKSS-MMPGFLSEVNALSAVSSVVNKFNPFDLISDSEASQEETTKKQKVVQKEQG 201
Query: 335 RPSGL---GVRRGTPRPRGKNQGFGH-PLNVQKQFTYQDPDCSPCLSQRAGRRRPQPPPR 390
+P G+ +++ P+P K QG G PL QD SQ+ + + QPP
Sbjct: 202 KPEGIIKPPLQQQPPKPIPKQQGPGRDPLQ-------QDGTPKSISSQQPEKIKSQPPGT 254
Query: 391 PLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPSLQSPWRKRARPV 450
P G Q Q H + L P + +PSL SP
Sbjct: 255 GK-----PIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSP-------- 301
Query: 451 GLWGRRQELSSSTPGLDSLPGTLP-WPPGSYTDKSAPSPSRPPPRACG 497
S P PG P PG +KS P P++PP + G
Sbjct: 302 ----------SKPPIQQPTPGKPPAQQPGH--EKSQPGPAKPPAQPSG 337
Score = 30.4 bits (67), Expect = 7.9
Identities = 39/179 (21%), Positives = 58/179 (32%), Gaps = 17/179 (9%)
Query: 327 PGDTQDSGRPSGL--------GVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQ 378
PG + +PSGL G + +P G + PL K Q P Q
Sbjct: 326 PGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKPPAQPLGPAKPPAQQTGSEKPSSEQ 385
Query: 379 RAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPS 438
+ QPP P +P Q+ + ++ A P +P
Sbjct: 386 PGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTPKPLAQQPGLQSPAKAPGPTKTPVQQPG 445
Query: 439 LQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRPPPRACG 497
P + A+ G + + T LPG PP P P++PPP+ G
Sbjct: 446 ---PGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAKPPP------QQPGPAKPPPQQPG 495
>gi|239741585 PREDICTED: hypothetical protein XP_002342243 [Homo
sapiens]
Length = 439
Score = 35.8 bits (81), Expect = 0.19
Identities = 34/103 (33%), Positives = 38/103 (36%), Gaps = 12/103 (11%)
Query: 400 GGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPSLQSPWRKRARPVGLWGRRQEL 459
G P G+ T SLR P+A V PWR A L G R L
Sbjct: 132 GVGPDPGRETALGTATLSLRSSPTAGSVSTGLVGKQREGGNGPWR--APVFRLPGARLRL 189
Query: 460 SSSTPGLDSLPGTLPWPPGSYTDKSAPSP-------SRPPPRA 495
SS P +LP P P +PSP SRPP RA
Sbjct: 190 SSQLPSPTTLPRAAPLTP---YRPGSPSPRGHSRLRSRPPTRA 229
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 35.8 bits (81), Expect = 0.19
Identities = 52/181 (28%), Positives = 63/181 (34%), Gaps = 32/181 (17%)
Query: 325 QPP-GDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQRAGRR 383
QPP G Q G P G G P P+G NQ G P K P+ P + G +
Sbjct: 102 QPPQGGNQSQGPPPRPGKPEGPP-PQGGNQSQGPPPRPGK------PEGPP---PQGGNQ 151
Query: 384 RPQPPPRPLCLE-IYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPSLQS- 441
PPPRP E P GG QG H +P PP + QS
Sbjct: 152 SQGPPPRPGKPEGPPPQGGNQSQGPPPH--------PGKPEG--------PPPQGGNQSQ 195
Query: 442 -PWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRP--PPRACGK 498
P + +P G + S P P P G+ P P +P PP G
Sbjct: 196 GPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGN 255
Query: 499 K 499
K
Sbjct: 256 K 256
Score = 31.6 bits (70), Expect = 3.6
Identities = 52/218 (23%), Positives = 72/218 (33%), Gaps = 22/218 (10%)
Query: 323 IAQPPGDTQDSGRPSGLGVRRG-----TPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLS 377
++Q + SG+P G + G TP P GK +G Q Q P
Sbjct: 23 VSQEESPSVISGKPEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPP 82
Query: 378 QRAGRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPP-AE 436
+ G + PPPRP P G PQ G + P + PP
Sbjct: 83 PQGGNQSQGPPPRP----GKPEGQPPQGGNQSQ----------GPPPRPGKPEGPPPQGG 128
Query: 437 PSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRP--PPR 494
Q P + +P G + S P P P G+ + P P +P PP
Sbjct: 129 NQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKPEGPPP 188
Query: 495 ACGKKISYWGGRMTQHLQTLMRWPLDSRGPHPFPGHTE 532
G + R + + S+GP P PG E
Sbjct: 189 QGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPE 226
>gi|15451844 ADAM metallopeptidase domain 19 preproprotein [Homo
sapiens]
Length = 918
Score = 35.4 bits (80), Expect = 0.25
Identities = 48/179 (26%), Positives = 65/179 (36%), Gaps = 23/179 (12%)
Query: 328 GDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCL--SQRAGRRRP 385
G + S PS L + P +N G GH F Q P + + R+
Sbjct: 731 GQLKPSALPSKLRQQFSCPFRVSQNSGTGH---ANPTFKLQTPQGKRKVINTPEILRKPS 787
Query: 386 QPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASL--------RVEPSANCFMLKSVPPAEP 437
QPPPRP Y GG P H + R E S + +PPA
Sbjct: 788 QPPPRP--PPDYLRGGSPPAPLPAHLSRAARNSPGPGSQIERTESSRRPPPSRPIPPAPN 845
Query: 438 SLQSPWRKRARPVGLWGRRQELSSSTPGLDSLP---GTLPW-PPGSYTDKSAPSPSRPP 492
+ S R RP ++ ++ PG SLP G P PPG+ +S P + P
Sbjct: 846 CIVSQDFSRPRP----PQKALPANPVPGRRSLPRPGGASPLRPPGAGPQQSRPLAALAP 900
>gi|67782330 trinucleotide repeat containing 6B isoform 3 [Homo
sapiens]
Length = 1029
Score = 35.0 bits (79), Expect = 0.32
Identities = 28/101 (27%), Positives = 38/101 (37%), Gaps = 15/101 (14%)
Query: 383 RRPQPPPRPLCLEI---------YPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVP 433
+R QPPP P C+ + G P Q+T A L+ E KS P
Sbjct: 142 KRGQPPP-PSCMLLGGGAGPPPCTAPGANPNNAQVTG-----ALLQSESGTAPVWSKSTP 195
Query: 434 PAEPSLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLP 474
PA + S W + WG + +ST G + P P
Sbjct: 196 PAPDNGTSAWGEPNESSPGWGEMDDTGASTTGWGNTPANAP 236
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 35.0 bits (79), Expect = 0.32
Identities = 52/192 (27%), Positives = 63/192 (32%), Gaps = 45/192 (23%)
Query: 325 QPPGDTQDSGRPSGL----GVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQRA 380
QP G G+P G G R P P GK Q G P K + + P P
Sbjct: 107 QPQGPPPPPGKPQGPPPQGGNRPQGPPPPGKPQ--GPPPQGDKSRSPRSPPGKPQGPPPQ 164
Query: 381 GRRRPQPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEP--- 437
G +PQ PP P P G PQ G+ +P PP +P
Sbjct: 165 GGNQPQGPPPP---PGKPQGPPPQGGK-------------KPQG------PPPPGKPQGP 202
Query: 438 --------SLQSPWRKRARPVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPS 489
S QSP K P G + + PG P P G + P P
Sbjct: 203 PPQGDKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP----PQGGNKPQGPPPPG 258
Query: 490 RP--PPRACGKK 499
+P PP G K
Sbjct: 259 KPQGPPAQGGSK 270
Score = 31.2 bits (69), Expect = 4.6
Identities = 49/175 (28%), Positives = 59/175 (33%), Gaps = 39/175 (22%)
Query: 326 PPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLNVQKQFTYQDPDCSPCLSQRAGRRRP 385
PPG Q G P G + P P GK Q G P K + + P P G +P
Sbjct: 53 PPGKPQ--GPPPQGGNKPQGPPPPGKPQ--GPPPQGDKSRSPRSPPGKPQGPPPQGGNQP 108
Query: 386 QPPPRPLCLEIYPTGGEPQQGQMTHFRHCLASLRVEPSANCFMLKSVPPAEPSLQSPWRK 445
Q PP P P G PQ G PP +P P
Sbjct: 109 QGPPPP---PGKPQGPPPQGGNRPQ-------------------GPPPPGKPQGPPPQGD 146
Query: 446 RAR-PVGLWGRRQELSSSTPGLDSLPGTLPWPPGSYTDKSAPSPSRPPPRACGKK 499
++R P G+ Q P + P P PPG P PPP+ GKK
Sbjct: 147 KSRSPRSPPGKPQ---GPPPQGGNQPQGPPPPPG--------KPQGPPPQG-GKK 189
>gi|27262667 colony stimulating factor 1 isoform a precursor [Homo
sapiens]
Length = 554
Score = 34.7 bits (78), Expect = 0.42
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVG-LWGRRQELSSSTPGLDSLPGTLPWPPGS 479
+P NC K++P ++P+ SP + A + + G E S T G LPG P
Sbjct: 186 KPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP----L 241
Query: 480 YTDKSAPSPSRPPPRAC 496
+T + RPP C
Sbjct: 242 HTVDPGSAKQRPPRSTC 258
>gi|27262663 colony stimulating factor 1 isoform b precursor [Homo
sapiens]
Length = 438
Score = 34.7 bits (78), Expect = 0.42
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVG-LWGRRQELSSSTPGLDSLPGTLPWPPGS 479
+P NC K++P ++P+ SP + A + + G E S T G LPG P
Sbjct: 186 KPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP----L 241
Query: 480 YTDKSAPSPSRPPPRAC 496
+T + RPP C
Sbjct: 242 HTVDPGSAKQRPPRSTC 258
>gi|27262661 colony stimulating factor 1 isoform a precursor [Homo
sapiens]
Length = 554
Score = 34.7 bits (78), Expect = 0.42
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)
Query: 421 EPSANCFMLKSVPPAEPSLQSPWRKRARPVG-LWGRRQELSSSTPGLDSLPGTLPWPPGS 479
+P NC K++P ++P+ SP + A + + G E S T G LPG P
Sbjct: 186 KPDCNCLYPKAIPSSDPASVSPHQPLAPSMAPVAGLTWEDSEGTEGSSLLPGEQP----L 241
Query: 480 YTDKSAPSPSRPPPRAC 496
+T + RPP C
Sbjct: 242 HTVDPGSAKQRPPRSTC 258
>gi|239749931 PREDICTED: FLJ43861 protein [Homo sapiens]
Length = 642
Score = 34.7 bits (78), Expect = 0.42
Identities = 29/103 (28%), Positives = 41/103 (39%), Gaps = 4/103 (3%)
Query: 584 HRVHSHNRLMEGQAHRLTT--SARMRMLSFSLHLYRSFSSETPLAVMNEARLALPA--AW 639
HR HS L ++H S R S +LH S S + + + LALP+ +
Sbjct: 177 HRSHSSLALPSHRSHSSLALPSLRSHFSSTALHSCGSHFSPVSPSHRSHSSLALPSLRSH 236
Query: 640 IRASTATSCSSSCSEAHRAITLSMTPLSSKARLPASHGPCRRQ 682
++ SC S S A M P + LP + PC Q
Sbjct: 237 FSSTALPSCGSHFSPVGSAAACEMRPDPRRPHLPLPNSPCAGQ 279
>gi|239744142 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 629
Score = 34.7 bits (78), Expect = 0.42
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 19/126 (15%)
Query: 451 GLWGRRQELSSSTPGLDSLPGTL------PWPPGSYTDKSAPSPSR--PPPRACGKKISY 502
G W + L P LP + PWP G++ + S S PP +C + Y
Sbjct: 271 GGWSQGLPLPPPPPPAAQLPPIVSQGNAGPWPQGAHGESSLASSQAKAPPDDSCNPRSVY 330
Query: 503 WGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGS-----VSFHVAQRSPLQVELRGMWGED 557
R+ QH + L R L P TE S V +A+R P G+W
Sbjct: 331 ENFRLWQHYKPLARRHL------PQSPDTEALSCFLIPVLRSLARRKPTMTLEEGLWRAM 384
Query: 558 RCFSHS 563
R + H+
Sbjct: 385 REWQHT 390
>gi|239744140 PREDICTED: hypothetical protein [Homo sapiens]
Length = 878
Score = 34.7 bits (78), Expect = 0.42
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 19/126 (15%)
Query: 451 GLWGRRQELSSSTPGLDSLPGTL------PWPPGSYTDKSAPSPSR--PPPRACGKKISY 502
G W + L P LP + PWP G++ + S S PP +C + Y
Sbjct: 271 GGWSQGLPLPPPPPPAAQLPPIVSQGNAGPWPQGAHGESSLASSQAKAPPDDSCNPRSVY 330
Query: 503 WGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGS-----VSFHVAQRSPLQVELRGMWGED 557
R+ QH + L R L P TE S V +A+R P G+W
Sbjct: 331 ENFRLWQHYKPLARRHL------PQSPDTEALSCFLIPVLRSLARRKPTMTLEEGLWRAM 384
Query: 558 RCFSHS 563
R + H+
Sbjct: 385 REWQHT 390
>gi|169191513 PREDICTED: hypothetical protein isoform 1 [Homo
sapiens]
Length = 878
Score = 34.7 bits (78), Expect = 0.42
Identities = 34/126 (26%), Positives = 48/126 (38%), Gaps = 19/126 (15%)
Query: 451 GLWGRRQELSSSTPGLDSLPGTL------PWPPGSYTDKSAPSPSR--PPPRACGKKISY 502
G W + L P LP + PWP G++ + S S PP +C + Y
Sbjct: 271 GGWSQGLPLPPPPPPAAQLPPIVSQGNAGPWPQGAHGESSLASSQAKAPPDDSCNPRSVY 330
Query: 503 WGGRMTQHLQTLMRWPLDSRGPHPFPGHTENGS-----VSFHVAQRSPLQVELRGMWGED 557
R+ QH + L R L P TE S V +A+R P G+W
Sbjct: 331 ENFRLWQHYKPLARRHL------PQSPDTEALSCFLIPVLRSLARRKPTMTLEEGLWRAM 384
Query: 558 RCFSHS 563
R + H+
Sbjct: 385 REWQHT 390
>gi|239754759 PREDICTED: similar to zinc finger protein 30 [Homo
sapiens]
Length = 546
Score = 34.3 bits (77), Expect = 0.55
Identities = 48/198 (24%), Positives = 71/198 (35%), Gaps = 42/198 (21%)
Query: 120 QLREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTG-HQGQREWKGRGRKTRTR 178
Q ++ TP+R+ L G+ + +T C RG +P G + Q + R R R
Sbjct: 278 QSEDEMTPERLFL--------GVSRGQTECRIPRGPRNRPGGPSRHQAQGMPRVRAGEPR 329
Query: 179 SPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTA----QDIPGSKTPTI 234
PG SG V R AF CP S I+ ++ Q+ PG ++PT
Sbjct: 330 PPGA--SGETPRVLSRRRQRAFPCPDCGQSFRLKINLTIHQRTHVEEGRQEAPG-RSPTS 386
Query: 235 GLPSPDRHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILH 294
G S + + P + W P EP+ +S R L
Sbjct: 387 C---------------GDSQAMLEPGEVVVPGPVIRWLPEEPEG-----RRSVAGGRAL- 425
Query: 295 KLFLHVGIKGQVSQALHC 312
VG + S+ HC
Sbjct: 426 -----VGRRPAASKMYHC 438
>gi|239749287 PREDICTED: hypothetical protein XP_002346980 [Homo
sapiens]
Length = 546
Score = 34.3 bits (77), Expect = 0.55
Identities = 48/198 (24%), Positives = 71/198 (35%), Gaps = 42/198 (21%)
Query: 120 QLREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTG-HQGQREWKGRGRKTRTR 178
Q ++ TP+R+ L G+ + +T C RG +P G + Q + R R R
Sbjct: 278 QSEDEMTPERLFL--------GVSRGQTECRIPRGPRNRPGGPSRHQAQGMPRVRAGEPR 329
Query: 179 SPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTA----QDIPGSKTPTI 234
PG SG V R AF CP S I+ ++ Q+ PG ++PT
Sbjct: 330 PPGA--SGETPRVLSRRRQRAFPCPDCGQSFRLKINLTIHQRTHVEEGRQEAPG-RSPTS 386
Query: 235 GLPSPDRHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILH 294
G S + + P + W P EP+ +S R L
Sbjct: 387 C---------------GDSQAMLEPGEVVVPGPVIRWLPEEPEG-----RRSVAGGRAL- 425
Query: 295 KLFLHVGIKGQVSQALHC 312
VG + S+ HC
Sbjct: 426 -----VGRRPAASKMYHC 438
>gi|239743377 PREDICTED: hypothetical protein XP_002342831 [Homo
sapiens]
Length = 546
Score = 34.3 bits (77), Expect = 0.55
Identities = 48/198 (24%), Positives = 71/198 (35%), Gaps = 42/198 (21%)
Query: 120 QLREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTG-HQGQREWKGRGRKTRTR 178
Q ++ TP+R+ L G+ + +T C RG +P G + Q + R R R
Sbjct: 278 QSEDEMTPERLFL--------GVSRGQTECRIPRGPRNRPGGPSRHQAQGMPRVRAGEPR 329
Query: 179 SPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTA----QDIPGSKTPTI 234
PG SG V R AF CP S I+ ++ Q+ PG ++PT
Sbjct: 330 PPGA--SGETPRVLSRRRQRAFPCPDCGQSFRLKINLTIHQRTHVEEGRQEAPG-RSPTS 386
Query: 235 GLPSPDRHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILH 294
G S + + P + W P EP+ +S R L
Sbjct: 387 C---------------GDSQAMLEPGEVVVPGPVIRWLPEEPEG-----RRSVAGGRAL- 425
Query: 295 KLFLHVGIKGQVSQALHC 312
VG + S+ HC
Sbjct: 426 -----VGRRPAASKMYHC 438
>gi|239509071 PREDICTED: similar to zinc finger protein 30 [Homo
sapiens]
Length = 546
Score = 34.3 bits (77), Expect = 0.55
Identities = 48/198 (24%), Positives = 71/198 (35%), Gaps = 42/198 (21%)
Query: 120 QLREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTG-HQGQREWKGRGRKTRTR 178
Q ++ TP+R+ L G+ + +T C RG +P G + Q + R R R
Sbjct: 278 QSEDEMTPERLFL--------GVSRGQTECRIPRGPRNRPGGPSRHQAQGMPRVRAGEPR 329
Query: 179 SPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTA----QDIPGSKTPTI 234
PG SG V R AF CP S I+ ++ Q+ PG ++PT
Sbjct: 330 PPGA--SGETPRVLSRRRQRAFPCPDCGQSFRLKINLTIHQRTHVEEGRQEAPG-RSPTS 386
Query: 235 GLPSPDRHRGIHMGIPGQSSTQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILH 294
G S + + P + W P EP+ +S R L
Sbjct: 387 C---------------GDSQAMLEPGEVVVPGPVIRWLPEEPEG-----RRSVAGGRAL- 425
Query: 295 KLFLHVGIKGQVSQALHC 312
VG + S+ HC
Sbjct: 426 -----VGRRPAASKMYHC 438
>gi|40353727 synaptopodin isoform A [Homo sapiens]
Length = 903
Score = 34.3 bits (77), Expect = 0.55
Identities = 65/285 (22%), Positives = 91/285 (31%), Gaps = 61/285 (21%)
Query: 254 STQINAAQAQAPNSTLSWDPWEPQSYPAELEQSFQSSRILHKLFLHVGIKGQVSQALHCP 313
S +I A PN LS E AEL QS + K + + CP
Sbjct: 458 SPRIQAKPKPKPNQNLS----EASGKGAELYARRQSR--MEKYVIESS--SHTPELARCP 509
Query: 314 APSACVDL-------------VIAQPPGDTQDSGRPSGLGVRRGTPRPRGKNQGFGHPLN 360
+P+ + V ++ P T + G G RP Q P
Sbjct: 510 SPTMSLPSSWKYPTNAPGAFRVASRSPARTPPASLYHGYLPENGVLRPEPTKQP---PYQ 566
Query: 361 VQKQFTYQDPDCSPC-LSQRAGRRRPQPPPRPLCLEIYPT---GGEPQQGQMTHFRHCLA 416
++ P P +S RA P +P L++ P G P +
Sbjct: 567 LRPSLFVLSPIKEPAKVSPRAAS-----PAKPSSLDLVPNLPKGALPPSPALPRPSRSSP 621
Query: 417 SLRVEPSANCFMLKSVPPAEPSLQSP------WRKRARP------------VGLWGRRQE 458
L P + +V P SP W RA+ + RR+
Sbjct: 622 GLYTSPGQDSLQPTAVSPPYGGDISPVSPSRAWSPRAKQAPRPSFSTRNAGIEAQDRRES 681
Query: 459 LSSS---TPGLDSLPGTL-------PWPPGSYTDKSAPSPSRPPP 493
L +S TPG P +L PW PG + S+P P PPP
Sbjct: 682 LPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMSSPPPLPPPP 726
>gi|207442670 double homeobox, 5 [Homo sapiens]
Length = 197
Score = 34.3 bits (77), Expect = 0.55
Identities = 51/210 (24%), Positives = 74/210 (35%), Gaps = 18/210 (8%)
Query: 52 PAAARCSSSSSSPLYSTSSFSRSLPWASKRSCTCGQMPRNPKGPYRSLSLIPARFVRAMS 111
PA S +S + F LP + + +P +GP R + L+
Sbjct: 2 PAEVHGSPPASLCPCQSVKFRPGLPEMALLTALDDTLPEEAQGPGRRMILLSTP--SQSD 59
Query: 112 ASKFCRPEQLREKPTPKRVLLSQAVLPAPGLDKAETSCWSQRGATAQPTGHQGQ-REWKG 170
A + C L K L +P P W Q + Q H+ Q R W G
Sbjct: 60 ALRACFERNLYPGIATKEELAQGIDIPEP-----RVQIWFQNERSCQLRQHRRQSRPWPG 114
Query: 171 RGRKTRTRSPGKVISGLEVMVSLARAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSK 230
R + R I+G + + L RA+ R GI+A R + +P S+
Sbjct: 115 RRDPQKGRRKRTAITGSQTAL-LLRAFEK--------DRFPGIAA-REELARETGLPESR 164
Query: 231 TPTIGLPSPDRHRGIHMGIPGQSSTQINAA 260
RHRG P Q+S + NAA
Sbjct: 165 IQIWFQNRRARHRGQSGRAPTQASIRCNAA 194
>gi|152963637 zinc finger protein 787 [Homo sapiens]
Length = 382
Score = 34.3 bits (77), Expect = 0.55
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 11/49 (22%)
Query: 475 WPPGSYTDKSAPSPSRPPPR----------ACGKKISYWGGRMTQHLQT 513
WPP + + P+ PPPR CGK S+W ++T+H +T
Sbjct: 40 WPPTKLSPPQSAPPAGPPPRPRPPAPYICNECGKSFSHW-SKLTRHQRT 87
>gi|113430659 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2061
Score = 33.9 bits (76), Expect = 0.72
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 14/133 (10%)
Query: 135 AVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSPGKVISGLEVMVSLA 194
A+ P+ G + + S W ++ + P +G R + R RK +PG ++
Sbjct: 1188 AIAPSAGALRGDRS-WKRKAIASTPGALRGNRSDRSRKRKAIASTPGALLGNRSDRSRKR 1246
Query: 195 RAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPDRHRGIHMGIPGQSS 254
+A + PT R ACR T + G + T P+P G P S
Sbjct: 1247 KA----IAPTPGAPRIDRSPACRAIAPTPGAL-GDDSSTAIAPTP--------GTPRGDS 1293
Query: 255 TQINAAQAQAPNS 267
+ N A A P +
Sbjct: 1294 SPANTAIASTPGA 1306
>gi|113430177 PREDICTED: hypothetical protein [Homo sapiens]
Length = 2028
Score = 33.9 bits (76), Expect = 0.72
Identities = 32/133 (24%), Positives = 51/133 (38%), Gaps = 14/133 (10%)
Query: 135 AVLPAPGLDKAETSCWSQRGATAQPTGHQGQREWKGRGRKTRTRSPGKVISGLEVMVSLA 194
A+ P+ G + + S W ++ + P +G R + R RK +PG ++
Sbjct: 1156 AIAPSAGALRGDRS-WKRKAIASTPGALRGNRSDRSRKRKAIASTPGALLGNRSDRSRKR 1214
Query: 195 RAWAAFVCPTSVPSRASGISACRNKPVTAQDIPGSKTPTIGLPSPDRHRGIHMGIPGQSS 254
+A + PT R ACR T + G + T P+P G P S
Sbjct: 1215 KA----IAPTPGAPRIDRSPACRAIAPTPGAL-GDDSSTAIAPTP--------GTPRGDS 1261
Query: 255 TQINAAQAQAPNS 267
+ N A A P +
Sbjct: 1262 SPANTAIASTPGA 1274
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.132 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,520,865
Number of Sequences: 37866
Number of extensions: 2560982
Number of successful extensions: 9608
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 143
Number of HSP's that attempted gapping in prelim test: 9332
Number of HSP's gapped (non-prelim): 458
length of query: 923
length of database: 18,247,518
effective HSP length: 112
effective length of query: 811
effective length of database: 14,006,526
effective search space: 11359292586
effective search space used: 11359292586
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.