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Search of human proteins with 239745046
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239745046 PREDICTED: hypothetical protein [Homo sapiens]
(174 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239745046 PREDICTED: hypothetical protein [Homo sapiens] 391 e-109
gi|239747126 PREDICTED: hypothetical protein XP_002343919 [Homo ... 87 9e-18
gi|239743851 PREDICTED: hypothetical protein [Homo sapiens] 86 2e-17
gi|239743848 PREDICTED: hypothetical protein [Homo sapiens] 86 2e-17
gi|239743746 PREDICTED: hypothetical protein [Homo sapiens] 86 2e-17
gi|239758169 PREDICTED: hypothetical protein [Homo sapiens] 82 2e-16
gi|239743837 PREDICTED: hypothetical protein [Homo sapiens] 82 3e-16
gi|239743815 PREDICTED: hypothetical protein [Homo sapiens] 82 3e-16
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 37 0.011
gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 36 0.015
gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Hom... 36 0.015
gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo ... 36 0.015
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 36 0.015
gi|24307909 ral guanine nucleotide dissociation stimulator isofo... 35 0.043
gi|108796058 ral guanine nucleotide dissociation stimulator isof... 35 0.043
gi|33186895 selenoprotein V [Homo sapiens] 34 0.056
gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas... 34 0.073
gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatas... 34 0.073
gi|62000702 diacylglycerol kinase kappa [Homo sapiens] 33 0.12
gi|55741655 anoctamin 8 [Homo sapiens] 33 0.16
gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens] 33 0.16
gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens] 33 0.16
gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens] 33 0.16
gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens] 33 0.16
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 33 0.16
gi|221307568 DENN/MADD domain containing 4A isoform 1 [Homo sapi... 32 0.21
gi|221307566 DENN/MADD domain containing 4A isoform 2 [Homo sapi... 32 0.21
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 32 0.21
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 32 0.21
gi|19111150 angiomotin isoform 2 [Homo sapiens] 32 0.21
>gi|239745046 PREDICTED: hypothetical protein [Homo sapiens]
Length = 174
Score = 391 bits (1005), Expect = e-109
Identities = 174/174 (100%), Positives = 174/174 (100%)
Query: 1 MGLPVLPSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHY 60
MGLPVLPSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHY
Sbjct: 1 MGLPVLPSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHY 60
Query: 61 GLALALALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPD 120
GLALALALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPD
Sbjct: 61 GLALALALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPD 120
Query: 121 PFLALHWPFPGPELAVVCPWSCHYPALLCSGCVITLPWPYSAFDPALALPWPSP 174
PFLALHWPFPGPELAVVCPWSCHYPALLCSGCVITLPWPYSAFDPALALPWPSP
Sbjct: 121 PFLALHWPFPGPELAVVCPWSCHYPALLCSGCVITLPWPYSAFDPALALPWPSP 174
>gi|239747126 PREDICTED: hypothetical protein XP_002343919 [Homo
sapiens]
Length = 185
Score = 86.7 bits (213), Expect = 9e-18
Identities = 68/193 (35%), Positives = 82/193 (42%), Gaps = 58/193 (30%)
Query: 13 LALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHYGLALALALVLPY 72
+ L WPS P P LV+ P + PW CP PAL L W P AL LP+
Sbjct: 1 MTLPWPS-----PGPSLVLPCPSM----PWPCPHPALALHWSCP----------ALALPW 41
Query: 73 PWPC---------PYPGPAPAAALALAWNL--------VLSRTCPDSAMALALLCLVPGP 115
PWPC P+P P P ++ W VLS C +ALALL ++P
Sbjct: 42 PWPCLLPGLAFALPWPDPRPTESMKWPWTCLAILCPCPVLSPPCSGPVLALALLLVLPLL 101
Query: 116 DPD---------PDPFLALHWPFPGPELAVVCPWSCHYPA-----LLCSGCVITLPWPYS 161
P P P L WP+ G ++ PW H A L C G + LPWP
Sbjct: 102 WPCSVFGHALCYPSPALPWPWPYHG----LLLPWPGHTLAFSTLALPCPG--LALPWPCP 155
Query: 162 AFDPALALPWPSP 174
A ALALP P P
Sbjct: 156 AM--ALALPCPCP 166
Score = 85.1 bits (209), Expect = 3e-17
Identities = 70/196 (35%), Positives = 77/196 (39%), Gaps = 61/196 (31%)
Query: 7 PSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPW----TCPGPALTLPW--------- 53
PSPG L L PS P+P L + W C LA PW PG A LPW
Sbjct: 6 PSPGPSLVLPCPSMPWPCPHPALALHWSCPALALPWPWPCLLPGLAFALPWPDPRPTESM 65
Query: 54 ---------LLPCPHYG-------LALALALVLPYPWPCP-------YPGPA-----PAA 85
L PCP LALAL LVLP WPC YP PA P
Sbjct: 66 KWPWTCLAILCPCPVLSPPCSGPVLALALLLVLPLLWPCSVFGHALCYPSPALPWPWPYH 125
Query: 86 ALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPFLALHWPFPGPELAVVCPWSCHYP 145
L L W P +A + L L P P LAL WP P LA+ CP C P
Sbjct: 126 GLLLPW--------PGHTLAFSTLAL-------PCPGLALPWPCPAMALALPCP--CPGP 168
Query: 146 A---LLCSGCVITLPW 158
LL V++ PW
Sbjct: 169 GSALLLALALVLSCPW 184
>gi|239743851 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 85.5 bits (210), Expect = 2e-17
Identities = 63/191 (32%), Positives = 82/191 (42%), Gaps = 54/191 (28%)
Query: 13 LALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHYGLALALALVLPY 72
+ L WPS P P L++ P + PW CP PAL L W P AL LP+
Sbjct: 1 MTLPWPS-----PGPSLILPCPSM----PWPCPHPALALHWSCP----------ALALPW 41
Query: 73 PWPC---------PYPGPAPAAALALAWNL--------VLSRTCPDSAMALALLCLVPGP 115
PWPC P+P P P ++ W +LS C A+ALALL ++P
Sbjct: 42 PWPCLLPGLAFALPWPDPRPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLL 101
Query: 116 DP---------DPDPFLALHWPFPGPELAVVCPW---SCHYPALLCSGCVITLPWPYSAF 163
P P P L WP+ G ++ PW + + L + LPWP A
Sbjct: 102 WPCSVFGRALCYPSPALPWPWPYHG----LLLPWPGPTLAFSTLALPFPGVALPWPCPAL 157
Query: 164 DPALALPWPSP 174
ALALP+P P
Sbjct: 158 --ALALPYPGP 166
Score = 33.1 bits (74), Expect = 0.12
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 16/53 (30%)
Query: 6 LPSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCP 58
LP PG L P+ A+ALPYP PG ALTL +L CP
Sbjct: 143 LPFPGVALPWPCPALALALPYPG----------------PGSALTLALVLSCP 179
>gi|239743848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 85.5 bits (210), Expect = 2e-17
Identities = 63/191 (32%), Positives = 82/191 (42%), Gaps = 54/191 (28%)
Query: 13 LALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHYGLALALALVLPY 72
+ L WPS P P L++ P + PW CP PAL L W P AL LP+
Sbjct: 1 MTLPWPS-----PGPSLILPCPSM----PWPCPHPALALHWSCP----------ALALPW 41
Query: 73 PWPC---------PYPGPAPAAALALAWNL--------VLSRTCPDSAMALALLCLVPGP 115
PWPC P+P P P ++ W +LS C A+ALALL ++P
Sbjct: 42 PWPCLLPGLAFALPWPDPRPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLL 101
Query: 116 DP---------DPDPFLALHWPFPGPELAVVCPW---SCHYPALLCSGCVITLPWPYSAF 163
P P P L WP+ G ++ PW + + L + LPWP A
Sbjct: 102 WPCSVFGRALCYPSPALPWPWPYHG----LLLPWPGPTLAFSTLALPFPGVALPWPCPAL 157
Query: 164 DPALALPWPSP 174
ALALP+P P
Sbjct: 158 --ALALPYPGP 166
Score = 33.1 bits (74), Expect = 0.12
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 16/53 (30%)
Query: 6 LPSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCP 58
LP PG L P+ A+ALPYP PG ALTL +L CP
Sbjct: 143 LPFPGVALPWPCPALALALPYPG----------------PGSALTLALVLSCP 179
>gi|239743746 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 85.5 bits (210), Expect = 2e-17
Identities = 63/191 (32%), Positives = 82/191 (42%), Gaps = 54/191 (28%)
Query: 13 LALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHYGLALALALVLPY 72
+ L WPS P P L++ P + PW CP PAL L W P AL LP+
Sbjct: 1 MTLPWPS-----PGPSLILPCPSM----PWPCPHPALALHWSCP----------ALALPW 41
Query: 73 PWPC---------PYPGPAPAAALALAWNL--------VLSRTCPDSAMALALLCLVPGP 115
PWPC P+P P P ++ W +LS C A+ALALL ++P
Sbjct: 42 PWPCLLPGLAFALPWPDPRPTESMKWPWTCLAILCPGPILSPPCSGPALALALLLVLPLL 101
Query: 116 DP---------DPDPFLALHWPFPGPELAVVCPW---SCHYPALLCSGCVITLPWPYSAF 163
P P P L WP+ G ++ PW + + L + LPWP A
Sbjct: 102 WPCSVFGRALCYPSPALPWPWPYHG----LLLPWPGPTLAFSTLALPFPGVALPWPCPAL 157
Query: 164 DPALALPWPSP 174
ALALP+P P
Sbjct: 158 --ALALPYPGP 166
Score = 33.1 bits (74), Expect = 0.12
Identities = 21/53 (39%), Positives = 24/53 (45%), Gaps = 16/53 (30%)
Query: 6 LPSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCP 58
LP PG L P+ A+ALPYP PG ALTL +L CP
Sbjct: 143 LPFPGVALPWPCPALALALPYPG----------------PGSALTLALVLSCP 179
>gi|239758169 PREDICTED: hypothetical protein [Homo sapiens]
Length = 181
Score = 82.0 bits (201), Expect = 2e-16
Identities = 66/175 (37%), Positives = 76/175 (43%), Gaps = 21/175 (12%)
Query: 7 PSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPW----TCPGPALTLPWLLPCPHYGL 62
PSPG L L PS P+P L + W C LA PW PG A LPW P P +
Sbjct: 6 PSPGPSLVLPCPSVPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESM 65
Query: 63 A---LALALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDP 119
LA++ P P P P ALALA LVL P S A LC P P
Sbjct: 66 KWPWTCLAILCPGPVLSP---PCSGPALALALLLVLPLLWPCSVFGHA-LCYPSPALPWP 121
Query: 120 DPFLALHWPFPGPELAVVCPWSCHYPALLCSGCVITLPWPYSAFDPALALPWPSP 174
P+ L P+PGP LA + L + LPWP ALALP+P P
Sbjct: 122 WPYHGLLLPWPGPTLA--------FSTLALPFPDLALPWPCPTL--ALALPYPGP 166
Score = 74.3 bits (181), Expect = 5e-14
Identities = 55/159 (34%), Positives = 68/159 (42%), Gaps = 58/159 (36%)
Query: 38 LAAPWTCPGPALTLPWLLPCPHYGLALALALVLPYPWPCPYPGPAPAAALALAWNLVLSR 97
+ PW PGP+L +LPCP PWPCP+P ALAL W+
Sbjct: 1 MTLPWPSPGPSL----VLPCPSV------------PWPCPHP------ALALHWS----- 33
Query: 98 TCPDSAMALALLCLVPGPDPDPDPFLALHWPFPGPELAVVCPWSCHYPALLCSGCVITLP 157
CP A+ CL+PG AL WP P P ++ PW+C A+LC G V++ P
Sbjct: 34 -CPALALPWPRPCLLPGLA------FALPWPDPRPTESMKWPWTCL--AILCPGPVLSPP 84
Query: 158 -----------------WPYSAFDPAL-----ALPWPSP 174
WP S F AL ALPWP P
Sbjct: 85 CSGPALALALLLVLPLLWPCSVFGHALCYPSPALPWPWP 123
Score = 36.2 bits (82), Expect = 0.015
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 14/58 (24%)
Query: 1 MGLPVLPSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCP 58
+ L P DLAL WP P L LA P+ PG ALTL +L CP
Sbjct: 136 LAFSTLALPFPDLALPWPC--------------PTLALALPYPGPGSALTLALVLSCP 179
>gi|239743837 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 81.6 bits (200), Expect = 3e-16
Identities = 67/175 (38%), Positives = 76/175 (43%), Gaps = 21/175 (12%)
Query: 7 PSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPW----TCPGPALTLPWLLPCPHYGL 62
PSPG L L PS P+P L + W C LA PW PG A LPW P P +
Sbjct: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESM 65
Query: 63 A---LALALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDP 119
LA++ P P P P ALALA LVL P S A LC P P
Sbjct: 66 KWPWTCLAILCPGPILSP---PCSGPALALALLLVLPLLWPCSVFGRA-LCYPSPALPWP 121
Query: 120 DPFLALHWPFPGPELAVVCPWSCHYPALLCSGCVITLPWPYSAFDPALALPWPSP 174
P+ L P+PGP LA + L + LPWP A ALALP P P
Sbjct: 122 WPYHGLLLPWPGPTLA--------FSTLALPFPGLALPWPCPAM--ALALPCPCP 166
Score = 74.3 bits (181), Expect = 5e-14
Identities = 54/159 (33%), Positives = 68/159 (42%), Gaps = 58/159 (36%)
Query: 38 LAAPWTCPGPALTLPWLLPCPHYGLALALALVLPYPWPCPYPGPAPAAALALAWNLVLSR 97
+ PW PGP+L +LPCP PWPCP+P ALAL W+
Sbjct: 1 MTLPWPSPGPSL----ILPCPSM------------PWPCPHP------ALALHWS----- 33
Query: 98 TCPDSAMALALLCLVPGPDPDPDPFLALHWPFPGPELAVVCPWSCHYPALLCSGCVITLP 157
CP A+ CL+PG AL WP P P ++ PW+C A+LC G +++ P
Sbjct: 34 -CPALALPWPRPCLLPGLA------FALPWPDPRPTESMKWPWTCL--AILCPGPILSPP 84
Query: 158 -----------------WPYSAFDPAL-----ALPWPSP 174
WP S F AL ALPWP P
Sbjct: 85 CSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWP 123
Score = 50.8 bits (120), Expect = 6e-07
Identities = 31/73 (42%), Positives = 35/73 (47%), Gaps = 7/73 (9%)
Query: 7 PSPGTDLALSWPSGAIALPYPELVVLWPCLVL-----AAPWTCPGPALTLPWLLPCPHYG 61
PSP L WP + LP+P + + L L A PW CP AL LP P P
Sbjct: 114 PSPA--LPWPWPYHGLLLPWPGPTLAFSTLALPFPGLALPWPCPAMALALPCPCPGPGSS 171
Query: 62 LALALALVLPYPW 74
L L LALVL PW
Sbjct: 172 LLLDLALVLSCPW 184
>gi|239743815 PREDICTED: hypothetical protein [Homo sapiens]
Length = 185
Score = 81.6 bits (200), Expect = 3e-16
Identities = 67/175 (38%), Positives = 76/175 (43%), Gaps = 21/175 (12%)
Query: 7 PSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPW----TCPGPALTLPWLLPCPHYGL 62
PSPG L L PS P+P L + W C LA PW PG A LPW P P +
Sbjct: 6 PSPGPSLILPCPSMPWPCPHPALALHWSCPALALPWPRPCLLPGLAFALPWPDPRPTESM 65
Query: 63 A---LALALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDP 119
LA++ P P P P ALALA LVL P S A LC P P
Sbjct: 66 RWPWTCLAILCPGPILSP---PCSGPALALALLLVLPLLWPCSVFGRA-LCYPSPALPWP 121
Query: 120 DPFLALHWPFPGPELAVVCPWSCHYPALLCSGCVITLPWPYSAFDPALALPWPSP 174
P+ L P+PGP LA + L + LPWP A ALALP P P
Sbjct: 122 WPYHGLLLPWPGPTLA--------FSTLALPFPGLALPWPCPAM--ALALPCPCP 166
Score = 73.9 bits (180), Expect = 6e-14
Identities = 54/159 (33%), Positives = 68/159 (42%), Gaps = 58/159 (36%)
Query: 38 LAAPWTCPGPALTLPWLLPCPHYGLALALALVLPYPWPCPYPGPAPAAALALAWNLVLSR 97
+ PW PGP+L +LPCP PWPCP+P ALAL W+
Sbjct: 1 MTLPWPSPGPSL----ILPCPSM------------PWPCPHP------ALALHWS----- 33
Query: 98 TCPDSAMALALLCLVPGPDPDPDPFLALHWPFPGPELAVVCPWSCHYPALLCSGCVITLP 157
CP A+ CL+PG AL WP P P ++ PW+C A+LC G +++ P
Sbjct: 34 -CPALALPWPRPCLLPGLA------FALPWPDPRPTESMRWPWTCL--AILCPGPILSPP 84
Query: 158 -----------------WPYSAFDPAL-----ALPWPSP 174
WP S F AL ALPWP P
Sbjct: 85 CSGPALALALLLVLPLLWPCSVFGRALCYPSPALPWPWP 123
Score = 45.1 bits (105), Expect = 3e-05
Identities = 29/70 (41%), Positives = 36/70 (51%), Gaps = 15/70 (21%)
Query: 5 VLPSPGTDLALSWPSGAIALPYPELVVLWPC--LVLAAPWTCPGPALTLPWLLPCPHYGL 62
+LP PG LA S +ALP+P L + WPC + LA P CPGP +L L
Sbjct: 128 LLPWPGPTLAFS----TLALPFPGLALPWPCPAMALALPCPCPGPGSSLH---------L 174
Query: 63 ALALALVLPY 72
LAL L P+
Sbjct: 175 DLALVLSCPW 184
Score = 34.3 bits (77), Expect = 0.056
Identities = 26/69 (37%), Positives = 28/69 (40%), Gaps = 27/69 (39%)
Query: 6 LPSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHYGLALA 65
LP PG LAL WP P + LA P CPGP + L L
Sbjct: 143 LPFPG--LALPWPC--------------PAMALALPCPCPGPGSS-----------LHLD 175
Query: 66 LALVLPYPW 74
LALVL PW
Sbjct: 176 LALVLSCPW 184
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 36.6 bits (83), Expect = 0.011
Identities = 46/147 (31%), Positives = 57/147 (38%), Gaps = 30/147 (20%)
Query: 3 LPVL-PSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHYG 61
LPVL PSPG L+ + P P + AP + PG +L +P P
Sbjct: 1609 LPVLAPSPGAAPVLA----SSQTPVPVM----------APSSTPGTSLASASPVPAPTPV 1654
Query: 62 LA-LALALVLPYPWPCPYPGPAPAAALALAWNL--VLSRTCPDSAMALA----------- 107
LA + +LP P P P P PA LALA L L + P ++L
Sbjct: 1655 LAPSSTQTMLPAPVPSPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQ 1714
Query: 108 LLCLVPGPDPDPDPFLALHWPFPGPEL 134
L L P P P L PGP L
Sbjct: 1715 TLSLTPASSLVPTPAQTLSLA-PGPPL 1740
Score = 33.9 bits (76), Expect = 0.073
Identities = 50/153 (32%), Positives = 62/153 (40%), Gaps = 21/153 (13%)
Query: 37 VLAAPWTCPGPALTLPWLLPCPHYGLALALALVLPYPWPCPYPGPAPAAALALAWNLVLS 96
+L AP + P L C L A AL P+P P P PA A+ LA A + +
Sbjct: 1525 LLLAPTSSHVPGLNSTVAPACSPV-LVPASALASPFP-SAPNPAPAQASLLAPASSASQA 1582
Query: 97 RTCPDSAMA---LALLCLVPGPDPDPDPFLALHWPFPG--PELA-------VVCPWSCHY 144
P + MA A+L P P P P LA P PG P LA V+ P S
Sbjct: 1583 LATPLAPMAAPQTAILAPSPAPPLAPLPVLA---PSPGAAPVLASSQTPVPVMAPSSTPG 1639
Query: 145 PALLCSGCVITLPWPY---SAFDPALALPWPSP 174
+ L S + P P S+ L P PSP
Sbjct: 1640 TS-LASASPVPAPTPVLAPSSTQTMLPAPVPSP 1671
Score = 27.7 bits (60), Expect = 5.2
Identities = 37/118 (31%), Positives = 50/118 (42%), Gaps = 10/118 (8%)
Query: 5 VLPSPGTDLALSWPSGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHYGLAL 64
++P+P L+L+ P + + P L A+P P PA TL L P L
Sbjct: 1724 LVPTPAQTLSLA-PGPPLGPTQTLSLAPAPPLAPASP-VGPAPAHTLT-LAPASSSASLL 1780
Query: 65 ALALVLPY---PWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDP 119
A A V P P P GPA A LALA + T ++ A +L+ G P P
Sbjct: 1781 APASVQTLTLSPAPVPTLGPAAAQTLALA----PASTQSPASQASSLVVSASGAAPLP 1834
>gi|169790903 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.015
Identities = 33/104 (31%), Positives = 42/104 (40%), Gaps = 20/104 (19%)
Query: 18 PSGAIALPYPELVVLWPCLVLAAPWTCPGPA-LTLPWLLPCPHYGLALALALVLPYPWPC 76
P ++P P P + + AP P PA + P P +A+A++ P P P
Sbjct: 122 PEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAP-------VAVAVLAPAPAPA 174
Query: 77 PYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPD 120
P P PAPA A A P A A A P P P PD
Sbjct: 175 PAPAPAPAPVAAPA-------PAPAPAPAPA-----PAPAPAPD 206
Score = 28.5 bits (62), Expect = 3.1
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Query: 36 LVLAAPWTCPGPALTLPWLLPCPHYGLALALALVLPYPWPCPYPGPAPAAA 86
+ + AP P PA P P P A A A P P P P P PAP AA
Sbjct: 164 VAVLAPAPAPAPA---PAPAPAPVAAPAPAPA---PAPAPAPAPAPAPDAA 208
Score = 27.3 bits (59), Expect = 6.8
Identities = 36/121 (29%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 19 SGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHY--GLALALALV--LPYPW 74
S ++ Y E V + C +L AP P L P GL A + +P P
Sbjct: 73 SDSVPAFYRETVQVGRCRLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPA 132
Query: 75 PCPYPGPAP--AAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPF-LALHWPFPG 131
P P P P A A A A V + A+A+ P P P P P +A P P
Sbjct: 133 PASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPA 192
Query: 132 P 132
P
Sbjct: 193 P 193
>gi|169790899 cyclin-dependent kinase inhibitor 1C isoform b [Homo
sapiens]
Length = 305
Score = 36.2 bits (82), Expect = 0.015
Identities = 33/104 (31%), Positives = 42/104 (40%), Gaps = 20/104 (19%)
Query: 18 PSGAIALPYPELVVLWPCLVLAAPWTCPGPA-LTLPWLLPCPHYGLALALALVLPYPWPC 76
P ++P P P + + AP P PA + P P +A+A++ P P P
Sbjct: 122 PEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAP-------VAVAVLAPAPAPA 174
Query: 77 PYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPD 120
P P PAPA A A P A A A P P P PD
Sbjct: 175 PAPAPAPAPVAAPA-------PAPAPAPAPA-----PAPAPAPD 206
Score = 28.5 bits (62), Expect = 3.1
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Query: 36 LVLAAPWTCPGPALTLPWLLPCPHYGLALALALVLPYPWPCPYPGPAPAAA 86
+ + AP P PA P P P A A A P P P P P PAP AA
Sbjct: 164 VAVLAPAPAPAPA---PAPAPAPVAAPAPAPA---PAPAPAPAPAPAPDAA 208
Score = 27.3 bits (59), Expect = 6.8
Identities = 36/121 (29%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 19 SGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHY--GLALALALV--LPYPW 74
S ++ Y E V + C +L AP P L P GL A + +P P
Sbjct: 73 SDSVPAFYRETVQVGRCRLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPA 132
Query: 75 PCPYPGPAP--AAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPF-LALHWPFPG 131
P P P P A A A A V + A+A+ P P P P P +A P P
Sbjct: 133 PASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPA 192
Query: 132 P 132
P
Sbjct: 193 P 193
>gi|4557441 cyclin-dependent kinase inhibitor 1C isoform a [Homo
sapiens]
Length = 316
Score = 36.2 bits (82), Expect = 0.015
Identities = 33/104 (31%), Positives = 42/104 (40%), Gaps = 20/104 (19%)
Query: 18 PSGAIALPYPELVVLWPCLVLAAPWTCPGPA-LTLPWLLPCPHYGLALALALVLPYPWPC 76
P ++P P P + + AP P PA + P P +A+A++ P P P
Sbjct: 133 PEQLPSVPVPAPASTPPPVPVLAPAPAPAPAPVAAPVAAP-------VAVAVLAPAPAPA 185
Query: 77 PYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPD 120
P P PAPA A A P A A A P P P PD
Sbjct: 186 PAPAPAPAPVAAPA-------PAPAPAPAPA-----PAPAPAPD 217
Score = 28.5 bits (62), Expect = 3.1
Identities = 21/51 (41%), Positives = 23/51 (45%), Gaps = 6/51 (11%)
Query: 36 LVLAAPWTCPGPALTLPWLLPCPHYGLALALALVLPYPWPCPYPGPAPAAA 86
+ + AP P PA P P P A A A P P P P P PAP AA
Sbjct: 175 VAVLAPAPAPAPA---PAPAPAPVAAPAPAPA---PAPAPAPAPAPAPDAA 219
Score = 27.3 bits (59), Expect = 6.8
Identities = 36/121 (29%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 19 SGAIALPYPELVVLWPCLVLAAPWTCPGPALTLPWLLPCPHY--GLALALALV--LPYPW 74
S ++ Y E V + C +L AP P L P GL A + +P P
Sbjct: 84 SDSVPAFYRETVQVGRCRLLLAPRPVAVAVAVSPPLEPAAESLDGLEEAPEQLPSVPVPA 143
Query: 75 PCPYPGPAP--AAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPF-LALHWPFPG 131
P P P P A A A A V + A+A+ P P P P P +A P P
Sbjct: 144 PASTPPPVPVLAPAPAPAPAPVAAPVAAPVAVAVLAPAPAPAPAPAPAPAPVAAPAPAPA 203
Query: 132 P 132
P
Sbjct: 204 P 204
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 36.2 bits (82), Expect = 0.015
Identities = 37/117 (31%), Positives = 40/117 (34%), Gaps = 22/117 (18%)
Query: 61 GLALALALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPD 120
G A A P P P P P PAP AA A A P +A A A PGP
Sbjct: 117 GAPAAAAAAAPPPTPAPPPPPAPVAAAAPA-------RAPRAAAAAATAPPSPGPAQ--- 166
Query: 121 PFLALHWPFPGPELAVVCPWSCHYPALLCSGCVITLPWPYSAFDPALAL---PWPSP 174
PGP P + PA V P A PA+A P P P
Sbjct: 167 ---------PGPRAQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPP 214
>gi|24307909 ral guanine nucleotide dissociation stimulator isoform
1 [Homo sapiens]
Length = 914
Score = 34.7 bits (78), Expect = 0.043
Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 12/102 (11%)
Query: 51 LPWLLPCPHYGLALALALV-LPYPWPCPYPGPAPAAALALAWNLVLS-----RTCPDSAM 104
+P L P P LAL A P P P P P PAP A + + + P+ A+
Sbjct: 264 VPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPAPGSELEVAPAPAPELQQAPEPAV 323
Query: 105 AL-----ALLCLVPGPDPDPDPFLALHW-PFPGPELAVVCPW 140
L L L P P+ DP P L P P P ++ W
Sbjct: 324 GLESAPAPALELEPAPEQDPAPSQTLELEPAPAPVPSLQPSW 365
>gi|108796058 ral guanine nucleotide dissociation stimulator isoform
2 [Homo sapiens]
Length = 859
Score = 34.7 bits (78), Expect = 0.043
Identities = 32/102 (31%), Positives = 41/102 (40%), Gaps = 12/102 (11%)
Query: 51 LPWLLPCPHYGLALALALV-LPYPWPCPYPGPAPAAALALAWNLVLS-----RTCPDSAM 104
+P L P P LAL A P P P P P PAP A + + + P+ A+
Sbjct: 209 VPALKPTPELELALTPARAPSPVPAPAPEPEPAPTPAPGSELEVAPAPAPELQQAPEPAV 268
Query: 105 AL-----ALLCLVPGPDPDPDPFLALHW-PFPGPELAVVCPW 140
L L L P P+ DP P L P P P ++ W
Sbjct: 269 GLESAPAPALELEPAPEQDPAPSQTLELEPAPAPVPSLQPSW 310
>gi|33186895 selenoprotein V [Homo sapiens]
Length = 346
Score = 34.3 bits (77), Expect = 0.056
Identities = 60/201 (29%), Positives = 76/201 (37%), Gaps = 46/201 (22%)
Query: 4 PVL-PSP-GTDLALSWPSGAIALPYPELVVLWPCLVLAA-PWTCPGPALTLPWLLPCPHY 60
PVL PSP GT + P+ A ++ L P LA P P PA P +P P
Sbjct: 48 PVLTPSPAGTSPLVLTPAPA------QIPTLVPTPALARIPRLVPPPA---PAWIPTP-- 96
Query: 61 GLALALALVLPYPWPCP---------YPGPAPAAALALAWNLVLSRTCPDSAMALAL--- 108
+ + + P P P P P PAPA LA + + DS +A AL
Sbjct: 97 -VPTPVPVRNPTPVPTPARTLTPPVRVPAPAPAQLLA---GIRAALPVLDSYLAPALPLD 152
Query: 109 --------LCLVPGPDPDPDPFLAL-------HWPFPGPELAVVCPWSCHYPALLCSGCV 153
L L+P DP+P P L L P PGP L P + + P
Sbjct: 153 PPPEPAPELPLLPEEDPEPAPSLKLIPSVSSEAGPAPGP-LPTRTPLAANSPGPTLDFTF 211
Query: 154 ITLPWPYSAFDPALALPWPSP 174
P DP + P PSP
Sbjct: 212 RADPSAIGLADPPIPSPVPSP 232
>gi|169217659 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 33.9 bits (76), Expect = 0.073
Identities = 35/91 (38%), Positives = 37/91 (40%), Gaps = 12/91 (13%)
Query: 45 PGPALTLP--WLLPCPHYGLALALALVLPYPWP----CPYPGPAPAAALALAWNLVLSRT 98
P P L P LL CPH L A L PYPGPAP A NL +
Sbjct: 309 PLPRLLSPSLGLLSCPHARHCLQDATNLNASEAQLPGSPYPGPAPGTA-----NLDSPQD 363
Query: 99 CP-DSAMALALLCLVPGPDPDPDPFLALHWP 128
P SA LL + PGP P P AL P
Sbjct: 364 LPQQSAPRTHLLTVSPGPAPSLPPRTALGPP 394
>gi|169167316 PREDICTED: similar to ectonucleotide
pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
Length = 542
Score = 33.9 bits (76), Expect = 0.073
Identities = 35/91 (38%), Positives = 37/91 (40%), Gaps = 12/91 (13%)
Query: 45 PGPALTLP--WLLPCPHYGLALALALVLPYPWP----CPYPGPAPAAALALAWNLVLSRT 98
P P L P LL CPH L A L PYPGPAP A NL +
Sbjct: 309 PLPRLLSPSLGLLSCPHARHCLQDATNLNASEAQLPGSPYPGPAPGTA-----NLDSPQD 363
Query: 99 CP-DSAMALALLCLVPGPDPDPDPFLALHWP 128
P SA LL + PGP P P AL P
Sbjct: 364 LPQQSAPRTHLLTVSPGPAPSLPPRTALGPP 394
>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
Length = 1271
Score = 33.1 bits (74), Expect = 0.12
Identities = 42/140 (30%), Positives = 51/140 (36%), Gaps = 19/140 (13%)
Query: 41 PWTCPGPALTLPWLLPCPHYGLALALALVLPYPWPCPY--PGPAPAAALALAWNLVLSRT 98
PW P P P P P L+ A P P PCP PGP P A A L T
Sbjct: 29 PWPPPPPPPAPP---PAPPL---LSEASPEPIPEPCPELAPGPCPEATSESATELYTEPT 82
Query: 99 CPDSAMALALLCLVPGPDPDPDPFLALHWPFPGPELAV-VCPWSCHYPALLCSGCVITLP 157
+ + P +P P+P P P PE A P PAL ++P
Sbjct: 83 PEPATEPASEPAPEPATEPAPEP-ATEPAPEPAPEPATESAPEPTPEPAL------ESVP 135
Query: 158 WPYSAFDPALA---LPWPSP 174
P P +A P P+P
Sbjct: 136 EPAPELTPEVAPELAPEPTP 155
Score = 32.3 bits (72), Expect = 0.21
Identities = 35/104 (33%), Positives = 41/104 (39%), Gaps = 33/104 (31%)
Query: 71 PYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPFLALHWPFP 130
P PWP P P PAP A L LS P+ P P+P P LA P
Sbjct: 27 PPPWPPPPPPPAPPPAPPL-----LSEASPE-------------PIPEPCPELA-----P 63
Query: 131 GPELAVVCPWSCHYPALLCSGCVITLPWPYSAFDPALALPWPSP 174
GP CP + A + T P P A +PA + P P P
Sbjct: 64 GP-----CPEATSESATE----LYTEPTPEPATEPA-SEPAPEP 97
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 32.7 bits (73), Expect = 0.16
Identities = 24/62 (38%), Positives = 25/62 (40%), Gaps = 13/62 (20%)
Query: 73 PWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPFLALHWPFPGP 132
PW C G AP ALA A CP AMA P P P P P A + P P
Sbjct: 1154 PWGCGGEGAAPRQALAAA-------ECPPCAMA------GPPPAPQPLPGDASFYSLPPP 1200
Query: 133 EL 134
L
Sbjct: 1201 PL 1202
>gi|94536864 hypothetical protein LOC138724 isoform D [Homo sapiens]
Length = 1031
Score = 32.7 bits (73), Expect = 0.16
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 7/77 (9%)
Query: 67 ALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPFLA-- 124
A LP P P P P L L W V R P LA+ L P P P P LA
Sbjct: 634 ATELPAPSSLSTPLPEPHIDLELVWRNVQQREVPQGPSPLAVDPLHPVPQP---PTLAEA 690
Query: 125 --LHWPFPGPELAVVCP 139
+ PG V CP
Sbjct: 691 VKIERTHPGLPKGVTCP 707
>gi|94536862 hypothetical protein LOC138724 isoform C [Homo sapiens]
Length = 1006
Score = 32.7 bits (73), Expect = 0.16
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 7/77 (9%)
Query: 67 ALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPFLA-- 124
A LP P P P P L L W V R P LA+ L P P P P LA
Sbjct: 609 ATELPAPSSLSTPLPEPHIDLELVWRNVQQREVPQGPSPLAVDPLHPVPQP---PTLAEA 665
Query: 125 --LHWPFPGPELAVVCP 139
+ PG V CP
Sbjct: 666 VKIERTHPGLPKGVTCP 682
>gi|94536860 hypothetical protein LOC138724 isoform B [Homo sapiens]
Length = 1044
Score = 32.7 bits (73), Expect = 0.16
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 7/77 (9%)
Query: 67 ALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPFLA-- 124
A LP P P P P L L W V R P LA+ L P P P P LA
Sbjct: 647 ATELPAPSSLSTPLPEPHIDLELVWRNVQQREVPQGPSPLAVDPLHPVPQP---PTLAEA 703
Query: 125 --LHWPFPGPELAVVCP 139
+ PG V CP
Sbjct: 704 VKIERTHPGLPKGVTCP 720
>gi|94681096 hypothetical protein LOC138724 isoform A [Homo sapiens]
Length = 1079
Score = 32.7 bits (73), Expect = 0.16
Identities = 27/77 (35%), Positives = 29/77 (37%), Gaps = 7/77 (9%)
Query: 67 ALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPFLA-- 124
A LP P P P P L L W V R P LA+ L P P P P LA
Sbjct: 682 ATELPAPSSLSTPLPEPHIDLELVWRNVQQREVPQGPSPLAVDPLHPVPQP---PTLAEA 738
Query: 125 --LHWPFPGPELAVVCP 139
+ PG V CP
Sbjct: 739 VKIERTHPGLPKGVTCP 755
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 32.7 bits (73), Expect = 0.16
Identities = 43/144 (29%), Positives = 53/144 (36%), Gaps = 48/144 (33%)
Query: 4 PVLPSPGTDLALSWPSGAIALPYPELVVLW--PCLVLAA----PWTCPGPALTLPWL--- 54
P +P PG P+ +P+PEL + P AA PW G + PW
Sbjct: 105 PTVPGPGPTGPYPTPN----MPFPELPRPYGAPTDPAAAGPLGPW---GSMSSGPWAPGM 157
Query: 55 ---LPCPHYGLALALALVLPYPWPCPYPGP----APAAALALAWNLVLSRTCPDSAMALA 107
P P+ +PYP P PYP P AP AA + W T P A
Sbjct: 158 GGQYPTPN----------MPYPSPGPYPAPPPPQAPGAAPPVPWG-----TVPPGAW--- 199
Query: 108 LLCLVPGPDPDPDPFLALHWPFPG 131
GP P P P +P PG
Sbjct: 200 ------GP-PAPYPAPTGSYPTPG 216
>gi|221307568 DENN/MADD domain containing 4A isoform 1 [Homo
sapiens]
Length = 1906
Score = 32.3 bits (72), Expect = 0.21
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 66 LALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCP 100
++++ P+ WPCPY P LALA VLS CP
Sbjct: 436 VSMIFPFHWPCPY---VPLCPLALA--DVLSAPCP 465
>gi|221307566 DENN/MADD domain containing 4A isoform 2 [Homo
sapiens]
Length = 1863
Score = 32.3 bits (72), Expect = 0.21
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 5/35 (14%)
Query: 66 LALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCP 100
++++ P+ WPCPY P LALA VLS CP
Sbjct: 436 VSMIFPFHWPCPY---VPLCPLALA--DVLSAPCP 465
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 32.3 bits (72), Expect = 0.21
Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 22/63 (34%)
Query: 70 LPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPFLALHWPF 129
+P+P P P PGP+P L + PGP P P ++ P
Sbjct: 10 MPHPGPSPGPGPSPGPILGPS----------------------PGPGPSPGSVHSMMGPS 47
Query: 130 PGP 132
PGP
Sbjct: 48 PGP 50
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 32.3 bits (72), Expect = 0.21
Identities = 18/63 (28%), Positives = 24/63 (38%), Gaps = 22/63 (34%)
Query: 70 LPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPFLALHWPF 129
+P+P P P PGP+P L + PGP P P ++ P
Sbjct: 10 MPHPGPSPGPGPSPGPILGPS----------------------PGPGPSPGSVHSMMGPS 47
Query: 130 PGP 132
PGP
Sbjct: 48 PGP 50
>gi|19111150 angiomotin isoform 2 [Homo sapiens]
Length = 675
Score = 32.3 bits (72), Expect = 0.21
Identities = 30/87 (34%), Positives = 35/87 (40%), Gaps = 9/87 (10%)
Query: 64 LALALVLPYPWPCPYPGPAPAAALALAWNLVLSRTCPDSAMALALLCLVPGPDPDPDPFL 123
+A A P P P P PAPAAA A A P SA A+A P P P P P +
Sbjct: 562 VAPAAPAPVPAPALVPVPAPAAAQASA---PAQTQAPTSAPAVA-----PTPAPTPTPAV 613
Query: 124 ALHWPFPGPELAVVCPWSCHYPALLCS 150
A P P P+L C+
Sbjct: 614 A-QAEVPASPATGPGPHRLSIPSLTCN 639
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.145 0.550
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,659,160
Number of Sequences: 37866
Number of extensions: 742846
Number of successful extensions: 3033
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 115
Number of HSP's that attempted gapping in prelim test: 2283
Number of HSP's gapped (non-prelim): 310
length of query: 174
length of database: 18,247,518
effective HSP length: 95
effective length of query: 79
effective length of database: 14,650,248
effective search space: 1157369592
effective search space used: 1157369592
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.