BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|239744639 PREDICTED: hypothetical protein XP_002343210 [Homo sapiens] (258 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|239755832 PREDICTED: hypothetical protein [Homo sapiens] 520 e-148 gi|239744639 PREDICTED: hypothetical protein XP_002343210 [Homo ... 520 e-148 gi|239753407 PREDICTED: hypothetical protein [Homo sapiens] 40 0.002 gi|83367077 mucin 16 [Homo sapiens] 39 0.003 gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 38 0.008 gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] 37 0.013 gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sap... 37 0.017 gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 37 0.017 gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo ... 37 0.022 gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] 37 0.022 gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] 37 0.022 gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 36 0.029 gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] 36 0.029 gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] 35 0.085 gi|111120318 NK6 transcription factor related, locus 1 [Homo sap... 35 0.085 gi|161016767 mucin 21 [Homo sapiens] 35 0.085 gi|33188461 GATA binding protein 4 [Homo sapiens] 34 0.11 gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo sa... 34 0.14 gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo sa... 34 0.14 gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens] 34 0.14 gi|226437579 NAC alpha domain containing [Homo sapiens] 33 0.19 gi|4506943 short stature homeobox isoform SHOXa [Homo sapiens] 33 0.19 gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] 33 0.19 gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] 33 0.19 gi|239749931 PREDICTED: FLJ43861 protein [Homo sapiens] 33 0.19 gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] 33 0.19 gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] 33 0.19 gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] 33 0.19 gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 33 0.19 gi|4885407 hyperpolarization activated cyclic nucleotide-gated p... 33 0.25 >gi|239755832 PREDICTED: hypothetical protein [Homo sapiens] Length = 258 Score = 520 bits (1338), Expect = e-148 Identities = 258/258 (100%), Positives = 258/258 (100%) Query: 1 MLRNLGFSSARRPLARACWVKVEASQSRTSEGTASDRSSCSSSSVSKICLRPQKGSHRGK 60 MLRNLGFSSARRPLARACWVKVEASQSRTSEGTASDRSSCSSSSVSKICLRPQKGSHRGK Sbjct: 1 MLRNLGFSSARRPLARACWVKVEASQSRTSEGTASDRSSCSSSSVSKICLRPQKGSHRGK 60 Query: 61 TAGSLRSLPPIPGPGTYRDRSLIHIFLLGADFSSRGDGQSDSSSISGGLRGDSSMLSHGP 120 TAGSLRSLPPIPGPGTYRDRSLIHIFLLGADFSSRGDGQSDSSSISGGLRGDSSMLSHGP Sbjct: 61 TAGSLRSLPPIPGPGTYRDRSLIHIFLLGADFSSRGDGQSDSSSISGGLRGDSSMLSHGP 120 Query: 121 SHLRLAWTSQAGVSRLGPSWQSCSSCGSSSPAAQPSFGLPVQALRTAAAAAATAAAAARC 180 SHLRLAWTSQAGVSRLGPSWQSCSSCGSSSPAAQPSFGLPVQALRTAAAAAATAAAAARC Sbjct: 121 SHLRLAWTSQAGVSRLGPSWQSCSSCGSSSPAAQPSFGLPVQALRTAAAAAATAAAAARC 180 Query: 181 QSRLLASLLLPRPGSPLPLLSLPSPQPARQSLTPHSHSSPSQRNDWKPGAHTDRSAQGRA 240 QSRLLASLLLPRPGSPLPLLSLPSPQPARQSLTPHSHSSPSQRNDWKPGAHTDRSAQGRA Sbjct: 181 QSRLLASLLLPRPGSPLPLLSLPSPQPARQSLTPHSHSSPSQRNDWKPGAHTDRSAQGRA 240 Query: 241 HAHRRRGRVAACALYWRM 258 HAHRRRGRVAACALYWRM Sbjct: 241 HAHRRRGRVAACALYWRM 258 >gi|239744639 PREDICTED: hypothetical protein XP_002343210 [Homo sapiens] Length = 258 Score = 520 bits (1338), Expect = e-148 Identities = 258/258 (100%), Positives = 258/258 (100%) Query: 1 MLRNLGFSSARRPLARACWVKVEASQSRTSEGTASDRSSCSSSSVSKICLRPQKGSHRGK 60 MLRNLGFSSARRPLARACWVKVEASQSRTSEGTASDRSSCSSSSVSKICLRPQKGSHRGK Sbjct: 1 MLRNLGFSSARRPLARACWVKVEASQSRTSEGTASDRSSCSSSSVSKICLRPQKGSHRGK 60 Query: 61 TAGSLRSLPPIPGPGTYRDRSLIHIFLLGADFSSRGDGQSDSSSISGGLRGDSSMLSHGP 120 TAGSLRSLPPIPGPGTYRDRSLIHIFLLGADFSSRGDGQSDSSSISGGLRGDSSMLSHGP Sbjct: 61 TAGSLRSLPPIPGPGTYRDRSLIHIFLLGADFSSRGDGQSDSSSISGGLRGDSSMLSHGP 120 Query: 121 SHLRLAWTSQAGVSRLGPSWQSCSSCGSSSPAAQPSFGLPVQALRTAAAAAATAAAAARC 180 SHLRLAWTSQAGVSRLGPSWQSCSSCGSSSPAAQPSFGLPVQALRTAAAAAATAAAAARC Sbjct: 121 SHLRLAWTSQAGVSRLGPSWQSCSSCGSSSPAAQPSFGLPVQALRTAAAAAATAAAAARC 180 Query: 181 QSRLLASLLLPRPGSPLPLLSLPSPQPARQSLTPHSHSSPSQRNDWKPGAHTDRSAQGRA 240 QSRLLASLLLPRPGSPLPLLSLPSPQPARQSLTPHSHSSPSQRNDWKPGAHTDRSAQGRA Sbjct: 181 QSRLLASLLLPRPGSPLPLLSLPSPQPARQSLTPHSHSSPSQRNDWKPGAHTDRSAQGRA 240 Query: 241 HAHRRRGRVAACALYWRM 258 HAHRRRGRVAACALYWRM Sbjct: 241 HAHRRRGRVAACALYWRM 258 >gi|239753407 PREDICTED: hypothetical protein [Homo sapiens] Length = 182 Score = 40.4 bits (93), Expect = 0.002 Identities = 41/137 (29%), Positives = 58/137 (42%), Gaps = 18/137 (13%) Query: 103 SSISGGLRGDSSMLSHGPSHLRLAWTSQAGVSRLGPSWQSCSSCGSSSPAAQPSFGLPV- 161 S + GG R +S + P L + +S +G S S G S A QP+ G + Sbjct: 26 SGVQGGQRNSTSARAPPPPPLAPSSSSSSGSS-------GSSGGGGSGSAGQPTLGSMLA 78 Query: 162 --QALRTAAAAAATAAAAARCQSR-----LLASLLLPRPG--SPLPLLSLPSPQPARQSL 212 A R A+ A A ++R LL P+PG P LPSP P ++ Sbjct: 79 VGSAARRASERAGGRAGGTALRAREPPPPLLPPPSPPQPGPKGPASPRPLPSPLPLLET- 137 Query: 213 TPHSHSSPSQRNDWKPG 229 TP +PS+R D + G Sbjct: 138 TPFPPDTPSRRQDRRGG 154 >gi|83367077 mucin 16 [Homo sapiens] Length = 14507 Score = 39.3 bits (90), Expect = 0.003 Identities = 39/142 (27%), Positives = 58/142 (40%), Gaps = 33/142 (23%) Query: 94 SRGDGQSDSSSISGGLRGDSSMLSHGPSHLRLAWTSQAGVSRLGPSWQSCSSCGSSSPAA 153 S+G S+ +++ GD S ++ P + +G S + PS S S S+SP + Sbjct: 5598 SQGFPHSEITTLRSRTPGDVSWMTTPPVE-----ETSSGFSLMSPSMTSPSPVSSTSPES 5652 Query: 154 QPSFGLPVQALRTAAAAAATAAAAARCQSRLLASLLLPRPGSPLPLLSLPSPQPARQSLT 213 PS LPV AL T+ T +L SP+P S Sbjct: 5653 IPSSPLPVTALLTSVLVTTT------------------------NVLGTTSPEPVTSS-- 5686 Query: 214 PHSHSSPSQR--NDWKPGAHTD 233 P + SSP+Q +K AHT+ Sbjct: 5687 PPNLSSPTQERLTTYKDTAHTE 5708 Score = 31.6 bits (70), Expect = 0.72 Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 12/126 (9%) Query: 94 SRGDGQSDSSSISGGLRGDSSMLSHGPSHLRLAWTSQAGVSRLGPSWQSCSSCGSSSPAA 153 ++G S+ +++ G G+ S ++ P + TS P+ S S S+SP + Sbjct: 5302 TQGFPYSEVTTLMGMGPGNVSWMTTPP----VEETSSVSSLMSSPAMTSPSPVSSTSPQS 5357 Query: 154 QPSFGLPVQALRTAAAAAATAAAAARCQSRLLASLLLPRPGSPLPLLSLPSPQPARQSLT 213 PS LPV AL T+ T + + SP L S+ +PA T Sbjct: 5358 IPSSPLPVTALPTSVLVTTTDVLGTTSPESVTS--------SPPNLSSITHERPATYKDT 5409 Query: 214 PHSHSS 219 H+ ++ Sbjct: 5410 AHTEAA 5415 >gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] Length = 2968 Score = 38.1 bits (87), Expect = 0.008 Identities = 57/222 (25%), Positives = 78/222 (35%), Gaps = 33/222 (14%) Query: 23 EASQSRTSEGTASDRSSCSSSSVSKICLRPQKGSHRGKTAGSLRSLPPIPGPGTYRDRSL 82 E S+S +S + S SS SSSS ++G G G GT Sbjct: 2555 EESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDG-----------GCGTGGRNC- 2602 Query: 83 IHIFLLGADFSSRGDGQSDSSSISGGLRGDSSMLSHGPSHLRLAWTSQAGVSRLGPSWQS 142 + SSR + SSS S SS S S + +S + S S S Sbjct: 2603 -------SAASSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2655 Query: 143 CSSCGSSSPAAQPSFGLPVQ----ALRTAAAAAATAAAAARC---------QSRLLASLL 189 SS SSS ++ S + + AA A TA +A+ + S Sbjct: 2656 SSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAH 2715 Query: 190 LPRPGSPLPLLSLPSPQPARQSLTPHSHSSPSQRNDWKPGAH 231 P +P P P PQP Q L P + + R + G H Sbjct: 2716 SPGKKTPAPQPQAPPPQPT-QPLQPKAQAGAKSRPKKREGVH 2756 >gi|169173184 PREDICTED: hypothetical protein [Homo sapiens] Length = 1230 Score = 37.4 bits (85), Expect = 0.013 Identities = 48/190 (25%), Positives = 74/190 (38%), Gaps = 8/190 (4%) Query: 17 ACWVKVEASQSRTSEGTASDRSSCSSSSVSKICLRPQKGSHRGKTAGSLRSLPPIPGPGT 76 A WV S++ TS + SS S S++ + ++ S S P G + Sbjct: 253 ASWVSTSTSRASTSSDSGWASSSASWDSITSDSGWVCPSASWASSSASWASAPSDSGSSS 312 Query: 77 YRDRSLIHIFLLG-ADFSSRG-DGQSDSSSISGGLRGDSSMLSHG---PSHLRLAWTSQA 131 + + G A FS+ G SDS S G S+ G PS + +S + Sbjct: 313 PSVSRASTLSVSGWASFSASGASAPSDSGWTSHSASGVSTTSDSGWASPSASGASTSSDS 372 Query: 132 GVSRLGPSWQSCSSCGSSSPAAQPSFGLPVQALRTAAAAAATAAAAARCQSRLLASLLLP 191 G + SW S S+ G+S+P+ G + A+ +A + C +L A Sbjct: 373 GWASPSASWASPSASGASTPS---DSGWASPSASGASMPSAPSLCPGSCFPQLTARTGFT 429 Query: 192 RPGSPLPLLS 201 G P LLS Sbjct: 430 VVGFPFSLLS 439 >gi|169211815 PREDICTED: keratin associated protein 4.6 [Homo sapiens] Length = 288 Score = 37.0 bits (84), Expect = 0.017 Identities = 30/79 (37%), Positives = 38/79 (48%), Gaps = 15/79 (18%) Query: 137 GPSWQSCSSCGSSSPAAQPSFGLPVQ----ALRTAAAAAATAAAAARCQSRLLASLLLPR 192 GPS + S C +S PAA P+ P A+ AAAA A AA AA C + S Sbjct: 205 GPS--AASLCAASQPAAVPAAASPAAAAPLAVNPAAAARAAAAPAAACVQSVAES----- 257 Query: 193 PGSPL----PLLSLPSPQP 207 P +PL P+ P+P P Sbjct: 258 PATPLAIAQPVSFPPAPVP 276 >gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] Length = 2752 Score = 37.0 bits (84), Expect = 0.017 Identities = 62/233 (26%), Positives = 86/233 (36%), Gaps = 51/233 (21%) Query: 24 ASQSRTSEGTASDRSSCSSSSVSKICLRPQKGSHR------GKTAGSLRSLPPIPGPGTY 77 +S S +S ++S SS S S S + ++P+ R PP P P Sbjct: 2544 SSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVREGRPPEPTPAKR 2603 Query: 78 RDRSLIHIFLLGADFSSRGDGQSDSSSISGGLRGDSSMLSHGPSHLRLAWTSQAGVSRLG 137 + RS SS S SSS S SS S Sbjct: 2604 KRRS-----------SSSSSSSSSSSSSSSSSSSSSSSSS-------------------- 2632 Query: 138 PSWQSCSSCGSSSPAAQPSFGLP-VQALRTAAAAAATAAAAARCQS--RLLASLLLPRPG 194 S S SS SSS ++ PS P QAL A+ R +S + + SL R Sbjct: 2633 -SSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSL 2691 Query: 195 SPLPL-LSLPSPQPARQSLTPHSHSSPSQRNDWKPGAHTDRSAQGRAHAHRRR 246 S P+ PSPQP+ + SS S+R G+ + R+ +H+RR Sbjct: 2692 SYSPVERRRPSPQPSPRD----QQSSSSER-----GSRRGQRGDSRSPSHKRR 2735 >gi|46852388 cell-cycle and apoptosis regulatory protein 1 [Homo sapiens] Length = 1150 Score = 36.6 bits (83), Expect = 0.022 Identities = 30/102 (29%), Positives = 40/102 (39%), Gaps = 5/102 (4%) Query: 152 AAQPSFGLPVQALRTAAAAAATAAAAARCQSRLLASLLLPRPGSPLPLLSLP-----SPQ 206 A Q +FG+ Q + A +AA+ + LL +P LL P PQ Sbjct: 231 APQTTFGVQTQPQPQSLLQAQISAASITPLLQTQPQPLLQQPQQKAGLLQPPVRIVSQPQ 290 Query: 207 PARQSLTPHSHSSPSQRNDWKPGAHTDRSAQGRAHAHRRRGR 248 PAR+ P S + R D P DRS + R R R Sbjct: 291 PARRLDPPSRFSGRNDRGDQVPNRKDDRSRERERERRRSRER 332 >gi|169162152 PREDICTED: hypothetical protein [Homo sapiens] Length = 520 Score = 36.6 bits (83), Expect = 0.022 Identities = 36/117 (30%), Positives = 46/117 (39%), Gaps = 9/117 (7%) Query: 147 GSSSPAAQPSFGLPVQALRTAAAAAATAAAAARCQSRL---LASLLLPRPGSPLPLLSLP 203 G+ PAA+ S P A A+A + AA+ AR L L S PR +PL P Sbjct: 244 GAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLAGSRAP 303 Query: 204 SPQP------ARQSLTPHSHSSPSQRNDWKPGAHTDRSAQGRAHAHRRRGRVAACAL 254 S P R +P H P R+ + G + R RGR CAL Sbjct: 304 SLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCAL 360 >gi|169161145 PREDICTED: hypothetical protein [Homo sapiens] Length = 520 Score = 36.6 bits (83), Expect = 0.022 Identities = 36/117 (30%), Positives = 46/117 (39%), Gaps = 9/117 (7%) Query: 147 GSSSPAAQPSFGLPVQALRTAAAAAATAAAAARCQSRL---LASLLLPRPGSPLPLLSLP 203 G+ PAA+ S P A A+A + AA+ AR L L S PR +PL P Sbjct: 244 GAERPAARGSAQQPPLARLLLASAVSLAASLARSPPPLQPRLGSASPPRLAAPLAGSRAP 303 Query: 204 SPQP------ARQSLTPHSHSSPSQRNDWKPGAHTDRSAQGRAHAHRRRGRVAACAL 254 S P R +P H P R+ + G + R RGR CAL Sbjct: 304 SLSPFPRRCRRRAERSPAGHGLPLPRSLSRGGEVVGARRRRGGEERRVRGRRQGCAL 360 >gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 855 Score = 36.2 bits (82), Expect = 0.029 Identities = 24/74 (32%), Positives = 32/74 (43%) Query: 148 SSSPAAQPSFGLPVQALRTAAAAAATAAAAARCQSRLLASLLLPRPGSPLPLLSLPSPQP 207 SSSP A PS +Q+ A +++ CQ L P P +P L +LPSP Sbjct: 300 SSSPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSPPA 359 Query: 208 ARQSLTPHSHSSPS 221 S S SP+ Sbjct: 360 TPPSQATTSLGSPT 373 Score = 28.5 bits (62), Expect = 6.1 Identities = 26/86 (30%), Positives = 34/86 (39%), Gaps = 11/86 (12%) Query: 150 SPAAQPSFGLPVQALRTAAAAAATAAAAARCQ-------SRLLASLLLPRPGSP----LP 198 SP+A PS T + A T+ + Q S L+ L P P +P LP Sbjct: 344 SPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALP 403 Query: 199 LLSLPSPQPARQSLTPHSHSSPSQRN 224 L P PA L+P + SP N Sbjct: 404 PLQAPPSPPASPPLSPLATPSPQAPN 429 >gi|89040432 PREDICTED: hypothetical protein [Homo sapiens] Length = 212 Score = 36.2 bits (82), Expect = 0.029 Identities = 34/125 (27%), Positives = 46/125 (36%), Gaps = 18/125 (14%) Query: 96 GDGQSDSSSISGGLRGDSSMLSHGPSHLRLAWTSQAGVSRLGPSWQSCSSCGSSSPAAQP 155 G Q S+ G G S HG L + A +GP W C S + + Sbjct: 57 GSAQPISAPEGRGGAGSRSRYCHGDGKL-----AAAAAGTVGPRWLPAGQCLSEAERPRR 111 Query: 156 SFGLPVQALRTAAAAAATAAAAARCQSR-------------LLASLLLPRPGSPLPLLSL 202 ++ AA+ AA++ A +R +S L L PRP S P L Sbjct: 112 PEPGGARSRPVAASPAASSRARSRPESSPGAPGSSVPALLPSLPPLAAPRPLSARPRLRP 171 Query: 203 PSPQP 207 P PQP Sbjct: 172 PQPQP 176 >gi|122937251 lysine (K)-specific demethylase 6B [Homo sapiens] Length = 1682 Score = 34.7 bits (78), Expect = 0.085 Identities = 46/170 (27%), Positives = 60/170 (35%), Gaps = 35/170 (20%) Query: 100 SDSSSISGGLRG-DSSMLSHGPSHLRLAWTSQAGVSRLGPSWQSCSSCGSSSPAAQPSFG 158 S SSS + GLRG + + G H + + RLGPS S +PAA P Sbjct: 401 SSSSSSNTGLRGVEPNPGIPGADHYQTPALEVSHHGRLGPSAHSSRKPFLGAPAATPHLS 460 Query: 159 LP-----------VQALRTAAAAA---ATAAAAARCQSRLLASLLLPRPGSPLPLLSLPS 204 LP + LR A A AAR +L L G P P P Sbjct: 461 LPPGPSSPPPPPCPRLLRPPPPPAWLKGPACRAAREDGEILEELFFGTEGPPRP---APP 517 Query: 205 PQPARQSL-----------TPHSHSSPSQRNDWKPGAHTDRSAQGRAHAH 243 P P R+ T SH+ P+ P T S+ + +H Sbjct: 518 PLPHREGFLGPPASRFSVGTQDSHTPPT------PPTPTTSSSNSNSGSH 561 >gi|111120318 NK6 transcription factor related, locus 1 [Homo sapiens] Length = 367 Score = 34.7 bits (78), Expect = 0.085 Identities = 43/133 (32%), Positives = 53/133 (39%), Gaps = 33/133 (24%) Query: 100 SDSSSISGGLRGDSSMLSHGPSHLRLAWTSQAGVSRLGPSWQSCSSC------------- 146 S SSS S + +H P L+ T G+S LG Q S+ Sbjct: 49 SSSSSSSSSSSPSPPLGTHNPGGLKPPATG--GLSSLGSPPQQLSAATPHGINDILSRPS 106 Query: 147 -----GSSSPAAQPS-------FGLPVQALRTAAAAAATAAAAARCQSRLLASLLLPRPG 194 G++ P+A PS + AAAAAA AAAAA + LLA LPR Sbjct: 107 MPVASGAALPSASPSGSSSSSSSSASASSASAAAAAAAAAAAAASSPAGLLAG--LPRFS 164 Query: 195 SPLPLLSLPSPQP 207 S LS P P P Sbjct: 165 S----LSPPPPPP 173 >gi|161016767 mucin 21 [Homo sapiens] Length = 566 Score = 34.7 bits (78), Expect = 0.085 Identities = 52/215 (24%), Positives = 85/215 (39%), Gaps = 9/215 (4%) Query: 23 EASQSRTSEGTASD-RSSCSSSSVSKICLRPQKGSHRG-KTAGSLRSLPPIPGPGTYRDR 80 E+S + + GTA++ SS SS +S + G TA + S G T + Sbjct: 259 ESSTTSSGAGTATNSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATN- 317 Query: 81 SLIHIFLLGADFSSRGDGQSDSSSISGGLRGDSSMLSHGPSHLRLAW--TSQAGVSRLGP 138 S GA ++ + + SS S +SS S G S + T+ +G S Sbjct: 318 SDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSSTTSSGTSTATN 377 Query: 139 SWQSCSSCGSS----SPAAQPSFGLPVQALRTAAAAAATAAAAARCQSRLLASLLLPRPG 194 S S S G+S S ++ S G ++ ++ A+ A +S +S Sbjct: 378 SESSTVSSGASTATTSESSTTSSGASTATNSESSTVSSGASTATNSESSTTSSGANTATN 437 Query: 195 SPLPLLSLPSPQPARQSLTPHSHSSPSQRNDWKPG 229 S + S S A + SHS+ + ++ KPG Sbjct: 438 SGSSVTSAGSGTAALTGMHTTSHSASTAVSEAKPG 472 >gi|33188461 GATA binding protein 4 [Homo sapiens] Length = 442 Score = 34.3 bits (77), Expect = 0.11 Identities = 29/98 (29%), Positives = 37/98 (37%), Gaps = 14/98 (14%) Query: 87 LLGADFSSRGDGQSDSSSISGGLRGDSSMLSHGPSHLRLAWTSQAGVSRLGPSWQSCSSC 146 +LG + G S S SGG G ++ GP G + P W + Sbjct: 48 VLGLSYLQGGGAGSASGGASGGSSGGAAS-GAGP-----------GTQQGSPGWSQAGAD 95 Query: 147 GSS--SPAAQPSFGLPVQALRTAAAAAATAAAAARCQS 182 G++ P P F P AAAAAA AA A S Sbjct: 96 GAAYTPPPVSPRFSFPGTTGSLAAAAAAAAAREAAAYS 133 >gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo sapiens] Length = 333 Score = 33.9 bits (76), Expect = 0.14 Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 5/103 (4%) Query: 117 SHGPSHLRLAWTSQAGVSRLGPSWQSCSSCGSSSPAAQPSFGLPVQALRTAAAAAATAAA 176 S P+ L ++ R GPS ++ +S P S P + + A Sbjct: 184 SKSPASSPLTRSTPPVRGRAGPSGRAAAS----PPTPIRSVLAPQPSTSNSQRLPRPQGA 239 Query: 177 AARCQSRLLASLLLPRPGSPLPLLSLPSPQPARQSLTPHSHSS 219 AA+ S+L +PRP S +PL S P P R +L P S S+ Sbjct: 240 AAKSSSQLPIPSAIPRPASRMPLTSRSVP-PGRGALPPDSLST 281 >gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo sapiens] Length = 333 Score = 33.9 bits (76), Expect = 0.14 Identities = 30/103 (29%), Positives = 44/103 (42%), Gaps = 5/103 (4%) Query: 117 SHGPSHLRLAWTSQAGVSRLGPSWQSCSSCGSSSPAAQPSFGLPVQALRTAAAAAATAAA 176 S P+ L ++ R GPS ++ +S P S P + + A Sbjct: 184 SKSPASSPLTRSTPPVRGRAGPSGRAAAS----PPTPIRSVLAPQPSTSNSQRLPRPQGA 239 Query: 177 AARCQSRLLASLLLPRPGSPLPLLSLPSPQPARQSLTPHSHSS 219 AA+ S+L +PRP S +PL S P P R +L P S S+ Sbjct: 240 AAKSSSQLPIPSAIPRPASRMPLTSRSVP-PGRGALPPDSLST 281 >gi|32698692 zinc finger, DHHC domain containing 8 [Homo sapiens] Length = 765 Score = 33.9 bits (76), Expect = 0.14 Identities = 38/151 (25%), Positives = 55/151 (36%), Gaps = 20/151 (13%) Query: 6 GFSSARRPLARACWVKVEASQSRTSEGTASDRSSCSSSSVSKICLRPQKGSHRGKTAGSL 65 GF AR P + + +S SR T+S +S + RP GSHR L Sbjct: 615 GFGGARNPALQTSLSSLSSSVSRAPR-TSSSSLQADQASSNAPGPRPSSGSHRSPARQGL 673 Query: 66 RSLPPIPGPGTYRDRSLIHIFLLGADFSSRGDGQSDSSSISGGLRGDSSMLSHGPSHLRL 125 S P P +Y + D S++ ++ D L PS L Sbjct: 674 PSPPGTPHSPSYAGPKAVAFI--------HTDLPEPPPSLT--VQRDHPQLKTPPSKLN- 722 Query: 126 AWTSQAGVSRLGPSWQSCSSCGSSSPAAQPS 156 G++RLGP + G P+A P+ Sbjct: 723 --GQSPGLARLGP------ATGPPGPSASPT 745 >gi|226437579 NAC alpha domain containing [Homo sapiens] Length = 1562 Score = 33.5 bits (75), Expect = 0.19 Identities = 45/149 (30%), Positives = 55/149 (36%), Gaps = 35/149 (23%) Query: 102 SSSISGGLRGDSSMLSHGPSHLRLAWTSQAGVSR---LGPSWQSCSSC----------GS 148 +++I GG R + L+ GPSHL L + +R G SW + G Sbjct: 31 ATTILGGDRREPCALTPGPSHLALTFLPSKPGARPQPEGASWDAGPGGAPSAWADPGEGG 90 Query: 149 SSPAAQPSFGLPVQALRTAAAAAATAAAAARCQSRLLASLLLPR---------------P 193 SP P GL QAL T A AT +LL PR P Sbjct: 91 PSPMLLPE-GLSSQALSTEAPLPATLEPRIVMGEETCQALLSPRAARTALRDQEGGHASP 149 Query: 194 GSPLPL-----LSLPSPQPARQS-LTPHS 216 P L LS+PSP P S TP S Sbjct: 150 DPPPELCSQGDLSVPSPPPDPDSFFTPPS 178 >gi|4506943 short stature homeobox isoform SHOXa [Homo sapiens] Length = 292 Score = 33.5 bits (75), Expect = 0.19 Identities = 15/29 (51%), Positives = 21/29 (72%) Query: 155 PSFGLPVQALRTAAAAAATAAAAARCQSR 183 P FGLP+ +L +A+AAA AAAA+ S+ Sbjct: 244 PPFGLPIASLAESASAAAVVAAAAKSNSK 272 >gi|34365793 WNK lysine deficient protein kinase 4 [Homo sapiens] Length = 1243 Score = 33.5 bits (75), Expect = 0.19 Identities = 29/93 (31%), Positives = 39/93 (41%), Gaps = 12/93 (12%) Query: 142 SCSSCGSSSPAAQPSFGLPVQALRTAAAAAATAAAAARCQSRLLASLLLPRPG------- 194 +CS SSP P TAA + A+A + + SLL P PG Sbjct: 895 TCSQVTLSSPFFPPCPSTSSFPSTTAAPLLSLASAFSLAVMTVAQSLLSPSPGLLSQSPP 954 Query: 195 ---SPLPLLSLPSP--QPARQSLTPHSHSSPSQ 222 SPLP L LP P ++S +PH+ S+ Sbjct: 955 APPSPLPSLPLPPPVAPGGQESPSPHTAEVESE 987 >gi|239754540 PREDICTED: NAC alpha domain containing [Homo sapiens] Length = 1522 Score = 33.5 bits (75), Expect = 0.19 Identities = 45/149 (30%), Positives = 55/149 (36%), Gaps = 35/149 (23%) Query: 102 SSSISGGLRGDSSMLSHGPSHLRLAWTSQAGVSR---LGPSWQSCSSC----------GS 148 +++I GG R + L+ GPSHL L + +R G SW + G Sbjct: 31 ATTILGGDRREPCALTPGPSHLALTFLPSKPGARPQPEGASWDAGPGGAPSAWADPGEGG 90 Query: 149 SSPAAQPSFGLPVQALRTAAAAAATAAAAARCQSRLLASLLLPR---------------P 193 SP P GL QAL T A AT +LL PR P Sbjct: 91 PSPMLLPE-GLSSQALSTEAPLPATLEPRIVMGEETCQALLSPRAARTALRDQEGGHASP 149 Query: 194 GSPLPL-----LSLPSPQPARQS-LTPHS 216 P L LS+PSP P S TP S Sbjct: 150 DPPPELCSQGDLSVPSPPPDPDSFFTPPS 178 >gi|239749931 PREDICTED: FLJ43861 protein [Homo sapiens] Length = 642 Score = 33.5 bits (75), Expect = 0.19 Identities = 60/242 (24%), Positives = 93/242 (38%), Gaps = 36/242 (14%) Query: 6 GFSSARRPLARACWVKVEASQSRTSEGTASDRSSCSSSSVSKICLRPQKGSHRGKTAGSL 65 GFS + R +VKV + T+ + ++CS S P SHR ++ +L Sbjct: 99 GFSQLTILIQRQTYVKVTRIRQGTAIRALGEFTNCSHFS-------PVSPSHRSHSSLAL 151 Query: 66 RSLPPIPGPGTYRDRSLIHIFLLGADFSSRGDGQSDSSSISGGLRGDSSMLSHGPSHLRL 125 SL ++ + +H G+ FS SS++ L SH L Sbjct: 152 PSLR------SHFSSTALHS--CGSHFSPVSPSHRSHSSLA---------LPSHRSHSSL 194 Query: 126 AWTSQAGVSRLGPSWQSCSSCGSS----SPAAQPSFGLPVQALRTAAAAAATAAAAARCQ 181 A S R S + SCGS SP+ + L + +LR+ ++ A + + Sbjct: 195 ALPSL----RSHFSSTALHSCGSHFSPVSPSHRSHSSLALPSLRSHFSSTALPSCGSHFS 250 Query: 182 SRLLASLLLPRPGSPLPLLSLPSPQPARQSLTPHSHSSPSQ--RNDW--KPGAHTDRSAQ 237 A+ RP P L LP+ A Q H++ SP+ R W A R+ Sbjct: 251 PVGSAAACEMRPDPRRPHLPLPNSPCAGQVDAAHTYLSPTHPARERWTLSAPASPQRALP 310 Query: 238 GR 239 GR Sbjct: 311 GR 312 >gi|239749105 PREDICTED: NAC alpha domain containing [Homo sapiens] Length = 1522 Score = 33.5 bits (75), Expect = 0.19 Identities = 45/149 (30%), Positives = 55/149 (36%), Gaps = 35/149 (23%) Query: 102 SSSISGGLRGDSSMLSHGPSHLRLAWTSQAGVSR---LGPSWQSCSSC----------GS 148 +++I GG R + L+ GPSHL L + +R G SW + G Sbjct: 31 ATTILGGDRREPCALTPGPSHLALTFLPSKPGARPQPEGASWDAGPGGAPSAWADPGEGG 90 Query: 149 SSPAAQPSFGLPVQALRTAAAAAATAAAAARCQSRLLASLLLPR---------------P 193 SP P GL QAL T A AT +LL PR P Sbjct: 91 PSPMLLPE-GLSSQALSTEAPLPATLEPRIVMGEETCQALLSPRAARTALRDQEGGHASP 149 Query: 194 GSPLPL-----LSLPSPQPARQS-LTPHS 216 P L LS+PSP P S TP S Sbjct: 150 DPPPELCSQGDLSVPSPPPDPDSFFTPPS 178 >gi|239743134 PREDICTED: NAC alpha domain containing [Homo sapiens] Length = 1562 Score = 33.5 bits (75), Expect = 0.19 Identities = 45/149 (30%), Positives = 55/149 (36%), Gaps = 35/149 (23%) Query: 102 SSSISGGLRGDSSMLSHGPSHLRLAWTSQAGVSR---LGPSWQSCSSC----------GS 148 +++I GG R + L+ GPSHL L + +R G SW + G Sbjct: 31 ATTILGGDRREPCALTPGPSHLALTFLPSKPGARPQPEGASWDAGPGGAPSAWADPGEGG 90 Query: 149 SSPAAQPSFGLPVQALRTAAAAAATAAAAARCQSRLLASLLLPR---------------P 193 SP P GL QAL T A AT +LL PR P Sbjct: 91 PSPMLLPE-GLSSQALSTEAPLPATLEPRIVMGEETCQALLSPRAARTALRDQEGGHASP 149 Query: 194 GSPLPL-----LSLPSPQPARQS-LTPHS 216 P L LS+PSP P S TP S Sbjct: 150 DPPPELCSQGDLSVPSPPPDPDSFFTPPS 178 >gi|239508792 PREDICTED: NAC alpha domain containing [Homo sapiens] Length = 1522 Score = 33.5 bits (75), Expect = 0.19 Identities = 45/149 (30%), Positives = 55/149 (36%), Gaps = 35/149 (23%) Query: 102 SSSISGGLRGDSSMLSHGPSHLRLAWTSQAGVSR---LGPSWQSCSSC----------GS 148 +++I GG R + L+ GPSHL L + +R G SW + G Sbjct: 31 ATTILGGDRREPCALTPGPSHLALTFLPSKPGARPQPEGASWDAGPGGAPSAWADPGEGG 90 Query: 149 SSPAAQPSFGLPVQALRTAAAAAATAAAAARCQSRLLASLLLPR---------------P 193 SP P GL QAL T A AT +LL PR P Sbjct: 91 PSPMLLPE-GLSSQALSTEAPLPATLEPRIVMGEETCQALLSPRAARTALRDQEGGHASP 149 Query: 194 GSPLPL-----LSLPSPQPARQS-LTPHS 216 P L LS+PSP P S TP S Sbjct: 150 DPPPELCSQGDLSVPSPPPDPDSFFTPPS 178 >gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sapiens] Length = 2881 Score = 33.5 bits (75), Expect = 0.19 Identities = 30/91 (32%), Positives = 40/91 (43%), Gaps = 6/91 (6%) Query: 66 RSLPPIPGPGTYRDRSLIHIFLLGADFSSRGDGQSDSSSISGGLRGDSSMLSHGPSHLRL 125 R+ P P P + + R + G++ SS D SDS S R SS S SH R Sbjct: 2108 RTEPLTPNPASKKPR----VHKRGSESSS--DSDSDSERSSCSSRSSSSSSSSSCSHSRS 2161 Query: 126 AWTSQAGVSRLGPSWQSCSSCGSSSPAAQPS 156 +S + S S S SS SSS ++ S Sbjct: 2162 GSSSSSSSSCSSASSSSSSSTSSSSSSSSSS 2192 >gi|4885407 hyperpolarization activated cyclic nucleotide-gated potassium channel 4 [Homo sapiens] Length = 1203 Score = 33.1 bits (74), Expect = 0.25 Identities = 31/88 (35%), Positives = 39/88 (44%), Gaps = 10/88 (11%) Query: 145 SCGSSSPAAQPSFGLP-VQALRTAAAAAATAAAAARCQSRLLASLLLPRPGSPLPLL--- 200 + S++P P P +QA AAAA + A A RL A++ P PGS L L Sbjct: 761 AAASATPTPTPVIWTPLIQAPLQAAAATTSVAIALTHHPRLPAAIFRPPPGSGLGNLGAG 820 Query: 201 SLPSPQPARQSLTPHS------HSSPSQ 222 P QSL P + SSPSQ Sbjct: 821 QTPRHLKRLQSLIPSALGSASPASSPSQ 848 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.126 0.387 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 11,755,618 Number of Sequences: 37866 Number of extensions: 630203 Number of successful extensions: 5691 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 58 Number of HSP's successfully gapped in prelim test: 261 Number of HSP's that attempted gapping in prelim test: 5018 Number of HSP's gapped (non-prelim): 728 length of query: 258 length of database: 18,247,518 effective HSP length: 100 effective length of query: 158 effective length of database: 14,460,918 effective search space: 2284825044 effective search space used: 2284825044 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.