Search of human proteins with 239744627

Search of human proteins with 239744627

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239744627 PREDICTED: hypothetical protein [Homo sapiens]
         (194 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239755824 PREDICTED: hypothetical protein [Homo sapiens]           392   e-110
gi|239750321 PREDICTED: hypothetical protein [Homo sapiens]           392   e-110
gi|239744627 PREDICTED: hypothetical protein [Homo sapiens]           392   e-110
gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]            39   0.004
gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo ...    39   0.004
gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo ...    39   0.004
gi|61742829 disrupted in schizophrenia 1 isoform S [Homo sapiens]      37   0.008
gi|61742827 disrupted in schizophrenia 1 isoform Es [Homo sapiens]     37   0.008
gi|61742825 disrupted in schizophrenia 1 isoform Lv [Homo sapiens]     37   0.008
gi|61742823 disrupted in schizophrenia 1 isoform L [Homo sapiens]      37   0.008
gi|153792074 proline rich 12 [Homo sapiens]                            37   0.008
gi|23510368 homeobox D11 [Homo sapiens]                                37   0.011
gi|5454106 TBP-related factor 10 [Homo sapiens]                        37   0.011
gi|55956910 meningioma  1 [Homo sapiens]                               37   0.011
gi|225690502 junctophilin 4 [Homo sapiens]                             37   0.014
gi|225690500 junctophilin 4 [Homo sapiens]                             37   0.014
gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas...    36   0.018
gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatas...    36   0.018
gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]            36   0.018
gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]            36   0.018
gi|4505531 oxysterol binding protein [Homo sapiens]                    36   0.018
gi|12707580 paired-like homeobox 2b [Homo sapiens]                     36   0.023
gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]                   35   0.031
gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]             35   0.031
gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]             35   0.031
gi|188536004 zinc finger protein 469 [Homo sapiens]                    35   0.040
gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]            35   0.052
gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo ...    35   0.052
gi|115511036 alpha-kinase 3 [Homo sapiens]                             35   0.052
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ...    35   0.052

>gi|239755824 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 194

 Score =  392 bits (1008), Expect = e-110
 Identities = 194/194 (100%), Positives = 194/194 (100%)

Query: 1   MAPVSDLGSLLLQVLPDFALQPPVLGLQAPHSVQVRGQAVVQALHGLLLVLDASHSCQTP 60
           MAPVSDLGSLLLQVLPDFALQPPVLGLQAPHSVQVRGQAVVQALHGLLLVLDASHSCQTP
Sbjct: 1   MAPVSDLGSLLLQVLPDFALQPPVLGLQAPHSVQVRGQAVVQALHGLLLVLDASHSCQTP 60

Query: 61  GYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGE 120
           GYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGE
Sbjct: 61  GYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGE 120

Query: 121 GGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRSHRCLAFK 180
           GGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRSHRCLAFK
Sbjct: 121 GGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRSHRCLAFK 180

Query: 181 FVSSSSSFFWQGLV 194
           FVSSSSSFFWQGLV
Sbjct: 181 FVSSSSSFFWQGLV 194


>gi|239750321 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 194

 Score =  392 bits (1008), Expect = e-110
 Identities = 194/194 (100%), Positives = 194/194 (100%)

Query: 1   MAPVSDLGSLLLQVLPDFALQPPVLGLQAPHSVQVRGQAVVQALHGLLLVLDASHSCQTP 60
           MAPVSDLGSLLLQVLPDFALQPPVLGLQAPHSVQVRGQAVVQALHGLLLVLDASHSCQTP
Sbjct: 1   MAPVSDLGSLLLQVLPDFALQPPVLGLQAPHSVQVRGQAVVQALHGLLLVLDASHSCQTP 60

Query: 61  GYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGE 120
           GYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGE
Sbjct: 61  GYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGE 120

Query: 121 GGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRSHRCLAFK 180
           GGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRSHRCLAFK
Sbjct: 121 GGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRSHRCLAFK 180

Query: 181 FVSSSSSFFWQGLV 194
           FVSSSSSFFWQGLV
Sbjct: 181 FVSSSSSFFWQGLV 194


>gi|239744627 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 194

 Score =  392 bits (1008), Expect = e-110
 Identities = 194/194 (100%), Positives = 194/194 (100%)

Query: 1   MAPVSDLGSLLLQVLPDFALQPPVLGLQAPHSVQVRGQAVVQALHGLLLVLDASHSCQTP 60
           MAPVSDLGSLLLQVLPDFALQPPVLGLQAPHSVQVRGQAVVQALHGLLLVLDASHSCQTP
Sbjct: 1   MAPVSDLGSLLLQVLPDFALQPPVLGLQAPHSVQVRGQAVVQALHGLLLVLDASHSCQTP 60

Query: 61  GYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGE 120
           GYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGE
Sbjct: 61  GYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGE 120

Query: 121 GGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRSHRCLAFK 180
           GGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRSHRCLAFK
Sbjct: 121 GGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRSHRCLAFK 180

Query: 181 FVSSSSSFFWQGLV 194
           FVSSSSSFFWQGLV
Sbjct: 181 FVSSSSSFFWQGLV 194


>gi|239755255 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 297

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 51/160 (31%), Positives = 61/160 (38%), Gaps = 31/160 (19%)

Query: 3   PVSDLGSLLLQVLPD----FALQPPVLGLQAPHSVQVRGQAVVQALHGLLLV------LD 52
           P + +G+ LL  LP+       Q  +L LQ  H V V G+AV+Q L   LLV      L 
Sbjct: 65  PATCMGAALL--LPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELG 122

Query: 53  ASHSCQTPGYPGGQAPGP-HAAPEAGGAG-HGDPGTRAPSACIDAGRAADRPGAVAGRLD 110
                Q   +   Q P P HAAP+A G G  G    R       AG  A R     G   
Sbjct: 123 VDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGG 182

Query: 111 R----------------AQGPVVGGEGGASGEAHAVRGER 134
           R                A+ P VGG G   G  H   G R
Sbjct: 183 RSHVAPAGARPARGARAAEHPAVGGRGHGPG-GHGCGGWR 221


>gi|239749748 PREDICTED: hypothetical protein XP_002347156 [Homo
           sapiens]
          Length = 446

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 51/160 (31%), Positives = 61/160 (38%), Gaps = 31/160 (19%)

Query: 3   PVSDLGSLLLQVLPD----FALQPPVLGLQAPHSVQVRGQAVVQALHGLLLV------LD 52
           P + +G+ LL  LP+       Q  +L LQ  H V V G+AV+Q L   LLV      L 
Sbjct: 214 PATCMGAALL--LPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELG 271

Query: 53  ASHSCQTPGYPGGQAPGP-HAAPEAGGAG-HGDPGTRAPSACIDAGRAADRPGAVAGRLD 110
                Q   +   Q P P HAAP+A G G  G    R       AG  A R     G   
Sbjct: 272 VDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGG 331

Query: 111 R----------------AQGPVVGGEGGASGEAHAVRGER 134
           R                A+ P VGG G   G  H   G R
Sbjct: 332 RSHVAPAGARPARGARAAEHPAVGGRGHGPG-GHGCGGWR 370


>gi|239744003 PREDICTED: hypothetical protein XP_002343004 [Homo
           sapiens]
          Length = 446

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 51/160 (31%), Positives = 61/160 (38%), Gaps = 31/160 (19%)

Query: 3   PVSDLGSLLLQVLPD----FALQPPVLGLQAPHSVQVRGQAVVQALHGLLLV------LD 52
           P + +G+ LL  LP+       Q  +L LQ  H V V G+AV+Q L   LLV      L 
Sbjct: 214 PATCMGAALL--LPEAHDVLGQQDLILLLQEAHLVDVVGEAVIQLLQLHLLVGAGVLELG 271

Query: 53  ASHSCQTPGYPGGQAPGP-HAAPEAGGAG-HGDPGTRAPSACIDAGRAADRPGAVAGRLD 110
                Q   +   Q P P HAAP+A G G  G    R       AG  A R     G   
Sbjct: 272 VDGVGQREVHRVLQEPHPGHAAPQAHGRGARGIHAARGRGVEAAAGAGAQRAAQAVGAGG 331

Query: 111 R----------------AQGPVVGGEGGASGEAHAVRGER 134
           R                A+ P VGG G   G  H   G R
Sbjct: 332 RSHVAPAGARPARGARAAEHPAVGGRGHGPG-GHGCGGWR 370


>gi|61742829 disrupted in schizophrenia 1 isoform S [Homo sapiens]
          Length = 678

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 14/121 (11%)

Query: 63  PGGQAPGPHAAPEAGGAGH--GDPGTRAPSACIDAGRAADRPGAV-------AGRLDRAQ 113
           PGG   G  AA   GG  H  G      P+AC    R A RPG +        G L  A 
Sbjct: 2   PGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPAV 61

Query: 114 GPVVGGEGGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRS 173
           G +    GG SGE           ++A +  + +        +S+S A P   S  G+ +
Sbjct: 62  GTLFRFPGGVSGEE-----SHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSA 116

Query: 174 H 174
           H
Sbjct: 117 H 117


>gi|61742827 disrupted in schizophrenia 1 isoform Es [Homo sapiens]
          Length = 369

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 14/121 (11%)

Query: 63  PGGQAPGPHAAPEAGGAGH--GDPGTRAPSACIDAGRAADRPGAV-------AGRLDRAQ 113
           PGG   G  AA   GG  H  G      P+AC    R A RPG +        G L  A 
Sbjct: 2   PGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPAV 61

Query: 114 GPVVGGEGGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRS 173
           G +    GG SGE           ++A +  + +        +S+S A P   S  G+ +
Sbjct: 62  GTLFRFPGGVSGEE-----SHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSA 116

Query: 174 H 174
           H
Sbjct: 117 H 117


>gi|61742825 disrupted in schizophrenia 1 isoform Lv [Homo sapiens]
          Length = 832

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 14/121 (11%)

Query: 63  PGGQAPGPHAAPEAGGAGH--GDPGTRAPSACIDAGRAADRPGAV-------AGRLDRAQ 113
           PGG   G  AA   GG  H  G      P+AC    R A RPG +        G L  A 
Sbjct: 2   PGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPAV 61

Query: 114 GPVVGGEGGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRS 173
           G +    GG SGE           ++A +  + +        +S+S A P   S  G+ +
Sbjct: 62  GTLFRFPGGVSGEE-----SHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSA 116

Query: 174 H 174
           H
Sbjct: 117 H 117


>gi|61742823 disrupted in schizophrenia 1 isoform L [Homo sapiens]
          Length = 854

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 35/121 (28%), Positives = 47/121 (38%), Gaps = 14/121 (11%)

Query: 63  PGGQAPGPHAAPEAGGAGH--GDPGTRAPSACIDAGRAADRPGAV-------AGRLDRAQ 113
           PGG   G  AA   GG  H  G      P+AC    R A RPG +        G L  A 
Sbjct: 2   PGGGPQGAPAAAGGGGVSHRAGSRDCLPPAACFRRRRLARRPGYMRSSTGPGIGFLSPAV 61

Query: 114 GPVVGGEGGASGEAHAVRGERKDRTQALRTTVAACASRATRVISQSEAPPPPRSRFGSRS 173
           G +    GG SGE           ++A +  + +        +S+S A P   S  G+ +
Sbjct: 62  GTLFRFPGGVSGEE-----SHHSESRARQCGLDSRGLLVRSPVSKSAAAPTVTSVRGTSA 116

Query: 174 H 174
           H
Sbjct: 117 H 117


>gi|153792074 proline rich 12 [Homo sapiens]
          Length = 2036

 Score = 37.4 bits (85), Expect = 0.008
 Identities = 32/91 (35%), Positives = 35/91 (38%), Gaps = 15/91 (16%)

Query: 78  GAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGEGGASGEAHAVRG-ERKD 136
           G G   PG   PS        A   GA AG   RA GP   G GGA G     R   +  
Sbjct: 335 GGGEPSPGAGEPSK-------AGPSGATAGASGRATGPEAAGGGGAGGGGGGYRPIIQSP 387

Query: 137 RTQALRTTVAACASRATRVISQSEAPPPPRS 167
             +  +    A A  ATR       PPPPRS
Sbjct: 388 GYKTGKGGYGAAAGGATR-------PPPPRS 411


>gi|23510368 homeobox D11 [Homo sapiens]
          Length = 338

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 32/85 (37%), Positives = 38/85 (44%), Gaps = 9/85 (10%)

Query: 60  PGYPGGQAPGPHAAPEA-GGAGHGDPGTRAP----SACIDAGRAADRPGAVAGRLDRAQG 114
           P + G Q P P A P+  G A  GDP T A     S C  A   ++  GA  G     +G
Sbjct: 188 PPFAGPQPPPPPAPPQPEGAADKGDPRTGAGGGGGSPCTKATPGSEPKGAAEGSGGDGEG 247

Query: 115 PVVGGEGGA--SGEAHAVRGERKDR 137
           P   GE GA  S  A A +  RK R
Sbjct: 248 PP--GEAGAEKSSSAVAPQRSRKKR 270


>gi|5454106 TBP-related factor 10 [Homo sapiens]
          Length = 218

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 22/61 (36%), Positives = 30/61 (49%), Gaps = 5/61 (8%)

Query: 51  LDASHSCQTPGYPGGQAPGPHAAPEAGGAG-----HGDPGTRAPSACIDAGRAADRPGAV 105
           L +S + +    P G A GP A   AGG G      G+P  R  +A + AG AA   GA+
Sbjct: 33  LPSSTAAENKASPAGTAGGPGAGAAAGGTGPLAARAGEPAERRGAAPVSAGGAAPPEGAI 92

Query: 106 A 106
           +
Sbjct: 93  S 93


>gi|55956910 meningioma  1 [Homo sapiens]
          Length = 1320

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 27/95 (28%), Positives = 38/95 (40%), Gaps = 17/95 (17%)

Query: 21  QPPVLGLQA-PHSVQVRGQAVVQA-------LHGLLLVLDASHSCQTPGYPGGQAPGPHA 72
           +PP+LG+   P+    RG + + A       +HG        H     G+PG   P  H 
Sbjct: 57  EPPILGMNMEPYGFHARGHSELHAGGLQAQPVHGFFGGQQPHH-----GHPGSHHPHQHH 111

Query: 73  APEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAG 107
               G  G  DPG    ++C+  GR     GA  G
Sbjct: 112 PHFGGNFGGPDPG----ASCLHGGRLLGYGGAAGG 142


>gi|225690502 junctophilin 4 [Homo sapiens]
          Length = 628

 Score = 36.6 bits (83), Expect = 0.014
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)

Query: 56  SCQTPGYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGP 115
           +C++P  PGG   GP ++P+A     G  G +A      AG  A+    + G   R   P
Sbjct: 475 ACRSPLPPGGDQ-GPFSSPKAWPEEWGGAGAQAEEL---AGYEAEDEAGMQGPGPRDGSP 530

Query: 116 VVGGEGGASGEAHAVRGERKDRTQALR 142
           ++GG   +SG      GE ++    LR
Sbjct: 531 LLGGCSDSSGSLREEEGEDEEPLPPLR 557


>gi|225690500 junctophilin 4 [Homo sapiens]
          Length = 628

 Score = 36.6 bits (83), Expect = 0.014
 Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 4/87 (4%)

Query: 56  SCQTPGYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGP 115
           +C++P  PGG   GP ++P+A     G  G +A      AG  A+    + G   R   P
Sbjct: 475 ACRSPLPPGGDQ-GPFSSPKAWPEEWGGAGAQAEEL---AGYEAEDEAGMQGPGPRDGSP 530

Query: 116 VVGGEGGASGEAHAVRGERKDRTQALR 142
           ++GG   +SG      GE ++    LR
Sbjct: 531 LLGGCSDSSGSLREEEGEDEEPLPPLR 557


>gi|169217659 PREDICTED: similar to ectonucleotide
           pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
          Length = 542

 Score = 36.2 bits (82), Expect = 0.018
 Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 8/94 (8%)

Query: 58  QTPGYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACID------AGRAADRPGAVAGRLDR 111
           Q  G   G+A G   +P A G G G     AP+ C+       A R   RP  +A     
Sbjct: 447 QVAGGASGEARGGRGSPGADGMGLGAETPGAPATCVPGLSPVRAARPGPRPWGLARVART 506

Query: 112 AQGPVVGGEGGASGEAHAVRGERKDRTQALRTTV 145
              P  G  GG+ G  H   G+ + R  A  T +
Sbjct: 507 PSAPRAG--GGSWGRLHRPGGQTRVRCGAQFTII 538


>gi|169167316 PREDICTED: similar to ectonucleotide
           pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
          Length = 542

 Score = 36.2 bits (82), Expect = 0.018
 Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 8/94 (8%)

Query: 58  QTPGYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACID------AGRAADRPGAVAGRLDR 111
           Q  G   G+A G   +P A G G G     AP+ C+       A R   RP  +A     
Sbjct: 447 QVAGGASGEARGGRGSPGADGMGLGAETPGAPATCVPGLSPVRAARPGPRPWGLARVART 506

Query: 112 AQGPVVGGEGGASGEAHAVRGERKDRTQALRTTV 145
              P  G  GG+ G  H   G+ + R  A  T +
Sbjct: 507 PSAPRAG--GGSWGRLHRPGGQTRVRCGAQFTII 538


>gi|239743072 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 36.2 bits (82), Expect = 0.018
 Identities = 40/144 (27%), Positives = 54/144 (37%), Gaps = 19/144 (13%)

Query: 26  GLQAPHSVQVRGQAVVQALHGLLLVLDASHSCQTPGYPGG--QAPGPHAAPEAGGAGHGD 83
           G   PH   +RG   ++     +L+  A    Q P   GG  Q P P +   AG      
Sbjct: 537 GACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAG------ 590

Query: 84  PGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGEGGASGEAHAVRGERKDRTQALRT 143
           PG       +D  RA      V G   R +G  +GG GG         GE + R    R 
Sbjct: 591 PGIARLGCDLDGPRA-----LVEGLHGRHEGGPLGGAGGGGS------GEGQGRGPGSRV 639

Query: 144 TVAACASRATRVISQSEAPPPPRS 167
           +V   +   +   + S APP P S
Sbjct: 640 SVRRSSRAPSSCRAASLAPPRPAS 663


>gi|239508718 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 837

 Score = 36.2 bits (82), Expect = 0.018
 Identities = 40/144 (27%), Positives = 54/144 (37%), Gaps = 19/144 (13%)

Query: 26  GLQAPHSVQVRGQAVVQALHGLLLVLDASHSCQTPGYPGG--QAPGPHAAPEAGGAGHGD 83
           G   PH   +RG   ++     +L+  A    Q P   GG  Q P P +   AG      
Sbjct: 537 GACGPHRGGIRGGRPLERADDRVLLAQALGPVQRPRGAGGRLQDPWPASLALAG------ 590

Query: 84  PGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGEGGASGEAHAVRGERKDRTQALRT 143
           PG       +D  RA      V G   R +G  +GG GG         GE + R    R 
Sbjct: 591 PGIARLGCDLDGPRA-----LVEGLHGRHEGGPLGGAGGGGS------GEGQGRGPGSRV 639

Query: 144 TVAACASRATRVISQSEAPPPPRS 167
           +V   +   +   + S APP P S
Sbjct: 640 SVRRSSRAPSSCRAASLAPPRPAS 663


>gi|4505531 oxysterol binding protein [Homo sapiens]
          Length = 807

 Score = 36.2 bits (82), Expect = 0.018
 Identities = 28/74 (37%), Positives = 31/74 (41%), Gaps = 6/74 (8%)

Query: 64  GGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRL---DRAQGPVVGGE 120
           GG   GP      GG G   PG+ A S  + A  AA  PG  AG +     A  P  GG 
Sbjct: 21  GGGGAGPPVVGGGGGRGDAGPGSGAASGTVVAA-AAGGPGPGAGGVAAAGPAPAPPTGGS 79

Query: 121 G--GASGEAHAVRG 132
           G  GA G   A  G
Sbjct: 80  GGSGAGGSGSAREG 93


>gi|12707580 paired-like homeobox 2b [Homo sapiens]
          Length = 314

 Score = 35.8 bits (81), Expect = 0.023
 Identities = 28/71 (39%), Positives = 30/71 (42%), Gaps = 9/71 (12%)

Query: 61  GYPGGQAPGPHAAPEAGGAGHGDPGTR------APSACIDAGRAADRPGAVAGRLDRAQG 114
           G  GG   GP  A   G AG G PG        A +A   A  AA    A AG L  A G
Sbjct: 209 GANGGGGGGPSPAGAPGAAGPGGPGGEPGKGGAAAAAAAAAAAAAAAAAAAAGGLAAAGG 268

Query: 115 PVVGGEGGASG 125
           P   G+G A G
Sbjct: 269 P---GQGWAPG 276


>gi|5031757 T-cell leukemia homeobox 1 [Homo sapiens]
          Length = 330

 Score = 35.4 bits (80), Expect = 0.031
 Identities = 33/92 (35%), Positives = 38/92 (41%), Gaps = 7/92 (7%)

Query: 62  YPGGQAPGPHAAPEAGGAG-HGDPGTRAPSACIDAGRAADR---PGAVAGRLDRAQGPVV 117
           Y GG   G  AA  AGGAG +G  G   P      G A       G+    +  A GP  
Sbjct: 57  YGGG---GSAAATGAGGAGAYGTGGPGGPGGPAGGGGACSMGPLTGSYNVNMALAGGPGP 113

Query: 118 GGEGGASGEAHAVRGERKDRTQALRTTVAACA 149
           GG GG+SG A A+      R  A R    A A
Sbjct: 114 GGGGGSSGGAGALSAAGVIRVPAHRPLAGAVA 145


>gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]
          Length = 338

 Score = 35.4 bits (80), Expect = 0.031
 Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 23/147 (15%)

Query: 64  GGQAPGPHAAPEAGGA------GHGDPGTRAPSACIDAGRAADRPGAVAGRL--DRAQGP 115
           G + P P  A   GG       G    G+ A      A RAA RP A +  L  ++A+G 
Sbjct: 52  GARGPAPLLASAGGGRARDGTWGVRTKGSGAALPSRPASRAAPRPEASSPPLPLEKARGG 111

Query: 116 VVGGEGGASGEAHAV---------------RGERKDRTQALRTTVAACASRATRVISQSE 160
           + G +GG +  A A                RG  K + ++ + T   C++  ++  S+ +
Sbjct: 112 LSGPQGGRARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQK 171

Query: 161 APPPPRSRFGSRSHRCLAFKFVSSSSS 187
           A    RS   S S    +    SSSSS
Sbjct: 172 ARRRTRSSSSSSSSSSSSSSSSSSSSS 198


>gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]
          Length = 341

 Score = 35.4 bits (80), Expect = 0.031
 Identities = 40/147 (27%), Positives = 60/147 (40%), Gaps = 23/147 (15%)

Query: 64  GGQAPGPHAAPEAGGA------GHGDPGTRAPSACIDAGRAADRPGAVAGRL--DRAQGP 115
           G + P P  A   GG       G    G+ A      A RAA RP A +  L  ++A+G 
Sbjct: 52  GARGPAPLLASAGGGRARDGTWGVRTKGSGAALPSRPASRAAPRPEASSPPLPLEKARGG 111

Query: 116 VVGGEGGASGEAHAV---------------RGERKDRTQALRTTVAACASRATRVISQSE 160
           + G +GG +  A A                RG  K + ++ + T   C++  ++  S+ +
Sbjct: 112 LSGPQGGRARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQK 171

Query: 161 APPPPRSRFGSRSHRCLAFKFVSSSSS 187
           A    RS   S S    +    SSSSS
Sbjct: 172 ARRRTRSSSSSSSSSSSSSSSSSSSSS 198


>gi|188536004 zinc finger protein 469 [Homo sapiens]
          Length = 3925

 Score = 35.0 bits (79), Expect = 0.040
 Identities = 46/189 (24%), Positives = 63/189 (33%), Gaps = 25/189 (13%)

Query: 17   DFALQPPVLGLQAPHSVQVRGQAVVQALHGLLLVLDASHSCQTP------GYPGGQAPGP 70
            D AL PP+  LQ P      G  V ++  G+L + + + + Q+P      G  GG   G 
Sbjct: 1867 DPALSPPIRQLQLP------GPGVAKSKDGILGLQELTPAAQSPPRVNPSGLEGGTVEGG 1920

Query: 71   HAA--PEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGE-------- 120
              A  P  G  G     T    A    G  AD    + G+ ++ QG     +        
Sbjct: 1921 KVACGPAQGSPGGVQVTTLPAVAGHQLGLEADGHWGLLGQAEKTQGQGTANQLQPENGVS 1980

Query: 121  -GGASGEAHAVRGERKDRTQALRTTV--AACASRATRVISQSEAPPPPRSRFGSRSHRCL 177
             GG    A      +   T      V    C      +  Q EA P P     +R    L
Sbjct: 1981 PGGTDNHASVNASPKTALTGPTEGAVLLEKCKGSRAAMSLQEEAEPTPSPPSPNRESLAL 2040

Query: 178  AFKFVSSSS 186
            A     S S
Sbjct: 2041 ALTAAHSRS 2049



 Score = 34.3 bits (77), Expect = 0.068
 Identities = 40/135 (29%), Positives = 53/135 (39%), Gaps = 35/135 (25%)

Query: 60   PGYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRA--------ADRPGAVAGRLDR 111
            P  PGG  PGP  +P+A          R PS  ++ G A        ADRP +VA + D 
Sbjct: 1127 PEEPGGSRPGPGRSPQA----------RGPSRSLETGAAAREGGPKCADRP-SVAPK-DP 1174

Query: 112  AQGPV-------------VGGEGGASGEAHAVRGERKDRTQALRTTVAACASR--ATRVI 156
             Q P                 E      A     +  + T+ALR+  AACA    A+  +
Sbjct: 1175 LQVPTNTETSEETRPSLDFPQEAKEPETAEESAPDSTEFTEALRSPPAACAGEMGASPGL 1234

Query: 157  SQSEAPPPPRSRFGS 171
               E PPP R   G+
Sbjct: 1235 LIPEQPPPSRHDTGT 1249


>gi|239754138 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 274

 Score = 34.7 bits (78), Expect = 0.052
 Identities = 45/131 (34%), Positives = 49/131 (37%), Gaps = 22/131 (16%)

Query: 49  LVLDASHSCQTPGYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGR 108
           L L A      PG P    P P AAP   GA      T   SA     R + R G V  +
Sbjct: 55  LKLPADPPRALPGSPEPPPPPPPAAPHVLGARVAAGPTHRLSA--SHSRVSSR-GPVGTK 111

Query: 109 LDRAQGPVVGGEGGASGEAHAVRGERKDRTQALRTTVAACASRATRVIS-QSEAPPPPRS 167
             R   P  G   GA   + A    R               +RA R IS QS  PPPP S
Sbjct: 112 PKR---PGQGRRAGARMRSAAPASPR---------------ARAARAISNQSSPPPPPPS 153

Query: 168 RFGSRSHRCLA 178
           R  SRS R  A
Sbjct: 154 RARSRSLRLSA 164


>gi|239742631 PREDICTED: hypothetical protein XP_002342600 [Homo
           sapiens]
          Length = 274

 Score = 34.7 bits (78), Expect = 0.052
 Identities = 45/131 (34%), Positives = 49/131 (37%), Gaps = 22/131 (16%)

Query: 49  LVLDASHSCQTPGYPGGQAPGPHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGR 108
           L L A      PG P    P P AAP   GA      T   SA     R + R G V  +
Sbjct: 55  LKLPADPPRALPGSPEPPPPPPPAAPHVLGARVAAGPTHRLSA--SHSRVSSR-GPVGTK 111

Query: 109 LDRAQGPVVGGEGGASGEAHAVRGERKDRTQALRTTVAACASRATRVIS-QSEAPPPPRS 167
             R   P  G   GA   + A    R               +RA R IS QS  PPPP S
Sbjct: 112 PKR---PGQGRRAGARMRSAAPASPR---------------ARAARAISNQSSPPPPPPS 153

Query: 168 RFGSRSHRCLA 178
           R  SRS R  A
Sbjct: 154 RARSRSLRLSA 164


>gi|115511036 alpha-kinase 3 [Homo sapiens]
          Length = 1907

 Score = 34.7 bits (78), Expect = 0.052
 Identities = 20/57 (35%), Positives = 24/57 (42%)

Query: 70  PHAAPEAGGAGHGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGEGGASGE 126
           P A   A G G G    R   A   AG A    GA+  R   ++G   GG  GA G+
Sbjct: 168 PRAGAAAAGRGPGAGAWRTGEAAASAGPAVGEGGAMGSRRAPSRGWGAGGRSGAGGD 224


>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
           [Homo sapiens]
          Length = 2191

 Score = 34.7 bits (78), Expect = 0.052
 Identities = 32/112 (28%), Positives = 40/112 (35%), Gaps = 4/112 (3%)

Query: 21  QPPVLGLQAPHSVQVRGQAVVQALHGLLLVLDASHSCQTPGYPGGQAPGPHAAPEAGGAG 80
           Q P +G+   HS          ++  L    +   + Q   YPG   PG  A    GG G
Sbjct: 201 QSPGMGMM--HSASAAAAGAPGSMDPLQNSHEGYPNSQCNHYPGYSRPG--AGGGGGGGG 256

Query: 81  HGDPGTRAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGEGGASGEAHAVRG 132
            G  G+        AG      GAVA     A     GG GG  G + A  G
Sbjct: 257 GGGGGSGGGGGGGGAGAGGAGAGAVAAAAAAAAAAAGGGGGGGYGGSSAGYG 308



 Score = 29.3 bits (64), Expect = 2.2
 Identities = 30/126 (23%), Positives = 41/126 (32%), Gaps = 10/126 (7%)

Query: 37  GQAVVQALHGLLLVLDASHSCQTPGYPGGQAPG------PHAAPEAGGA----GHGDPGT 86
           G  + Q  HG      A      PG P    PG      P     AGG     G G  GT
Sbjct: 93  GPDMEQPQHGGAKDSAAGGQADPPGPPLLSKPGDEDDAPPKMGEPAGGRYEHPGLGALGT 152

Query: 87  RAPSACIDAGRAADRPGAVAGRLDRAQGPVVGGEGGASGEAHAVRGERKDRTQALRTTVA 146
           + P   +  G               +  P  GG GG +G      G ++     +  + +
Sbjct: 153 QQPPVAVPGGGGGPAAVPEFNNYYGSAAPASGGPGGRAGPCFDQHGGQQSPGMGMMHSAS 212

Query: 147 ACASRA 152
           A A+ A
Sbjct: 213 AAAAGA 218


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.317    0.134    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,899,938
Number of Sequences: 37866
Number of extensions: 560559
Number of successful extensions: 4243
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 345
Number of HSP's that attempted gapping in prelim test: 3731
Number of HSP's gapped (non-prelim): 878
length of query: 194
length of database: 18,247,518
effective HSP length: 97
effective length of query: 97
effective length of database: 14,574,516
effective search space: 1413728052
effective search space used: 1413728052
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.