Guide to the Human Genome
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Name: OR1L1 Sequence: fasta or formatted (360aa) NCBI GI: 116686100
Description:

olfactory receptor, family 1, subfamily L, member 1

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         15           2
 C cysteine            3.9         14           2
 D aspartate           3.3         12           2
 E glutamate           2.2          8           1
 F phenylalanine       7.2         26           3
 G glycine             3.3         12           1
 H histidine           3.1         11           2
 I isoleucine          9.7         35           3
 K lysine              4.4         16           2
 L leucine            12.8         46           3
 M methionine          3.6         13           1
 N asparagine          5.0         18           2
 P proline             4.4         16           1
 Q glutamine           2.8         10           1
 R arginine            4.2         15           2
 S serine              8.3         30           2
 T threonine           6.7         24           2
 V valine              6.4         23           2
 W tryptophan          0.0          0           0
 Y tyrosine            4.4         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 1, subfamily L, member 1... 
OR1L3                 0.661   olfactory receptor, family 1, subfamily L, member 3 ...
OR1L8                 0.573   olfactory receptor, family 1, subfamily L, member 8 ...
OR1L6                 0.567   olfactory receptor, family 1, subfamily L, member 6 ...
OR1L4                 0.567   olfactory receptor, family 1, subfamily L, member 4 ...
OR1F1                 0.447   olfactory receptor, family 1, subfamily F, member 1 [...
OR1Q1                 0.433   olfactory receptor, family 1, subfamily Q, member 1 ...
OR1A1                 0.433   olfactory receptor, family 1, subfamily A, member 1 [...
OR1E1                 0.426   olfactory receptor, family 1, subfamily E, member 1...
OR1M1                 0.421   olfactory receptor, family 1, subfamily M, member 1 ...
OR1D2                 0.420   olfactory receptor, family 1, subfamily D, member 2 [...
OR1G1                 0.419   olfactory receptor, family 1, subfamily G, member 1 ...
OR1J2                 0.417   olfactory receptor, family 1, subfamily J, member 2 ...
OR1N2                 0.416   olfactory receptor, family 1, subfamily N, member 2 ...
OR1J1                 0.414   olfactory receptor, family 1, subfamily J, member 1 ...
OR1C1                 0.411   olfactory receptor, family 1, subfamily C, member 1...
OR1J4                 0.407   olfactory receptor, family 1, subfamily J, member 4 ...
OR1D5                 0.407   olfactory receptor, family 1, subfamily D, member 5 [...
OR1D4                 0.406   olfactory receptor, family 1, subfamily D, member 4...
OR1E2                 0.406   olfactory receptor, family 1, subfamily E, member 2 ...
OR5I1                 0.400   olfactory receptor, family 5, subfamily I, member 1 [...
OR1N1                 0.396   olfactory receptor, family 1, subfamily N, member 1 ...
OR1S1                 0.396   olfactory receptor, family 1, subfamily S, member 1 ...
OR1I1                 0.396   olfactory receptor, family 1, subfamily I, member 1 ...
OR1S2                 0.394   olfactory receptor, family 1, subfamily S, member 2 ...
OR1K1                 0.394   olfactory receptor, family 1, subfamily K, member 1 ...
OR8U8                 0.394   olfactory receptor, family 8, subfamily U, member 8 ...
OR8U1                 0.391   olfactory receptor, family 8, subfamily U, member 1 ...
OR5R1                 0.390   olfactory receptor, family 5, subfamily R, member 1 ...
OR8U9                 0.389   olfactory receptor, family 8, subfamily U, member 9 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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