Guide to the Human Genome
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Name: OR1J4 Sequence: fasta or formatted (313aa) NCBI GI: 52218826
Description:

olfactory receptor, family 1, subfamily J, member 4

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         16           1
 C cysteine            2.9          9           1
 D aspartate           4.2         13           1
 E glutamate           1.9          6           1
 F phenylalanine       6.4         20           3
 G glycine             3.8         12           1
 H histidine           2.6          8           1
 I isoleucine          8.6         27           2
 K lysine              2.9          9           1
 L leucine            17.6         55           3
 M methionine          2.9          9           1
 N asparagine          3.2         10           1
 P proline             3.5         11           1
 Q glutamine           3.2         10           2
 R arginine            2.6          8           1
 S serine             10.2         32           3
 T threonine           7.7         24           2
 V valine              6.4         20           2
 W tryptophan          0.6          2           1
 Y tyrosine            3.8         12           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 1, subfamily J, member 4 ... 
OR1J2                 0.785   olfactory receptor, family 1, subfamily J, member 2 ...
OR1J1                 0.756   olfactory receptor, family 1, subfamily J, member 1 ...
OR1E1                 0.626   olfactory receptor, family 1, subfamily E, member 1...
OR1E2                 0.621   olfactory receptor, family 1, subfamily E, member 2 ...
OR1F1                 0.589   olfactory receptor, family 1, subfamily F, member 1 [...
OR1N1                 0.567   olfactory receptor, family 1, subfamily N, member 1 ...
OR1S1                 0.552   olfactory receptor, family 1, subfamily S, member 1 ...
OR1S2                 0.550   olfactory receptor, family 1, subfamily S, member 2 ...
OR1M1                 0.548   olfactory receptor, family 1, subfamily M, member 1 ...
OR1N2                 0.541   olfactory receptor, family 1, subfamily N, member 2 ...
OR1C1                 0.536   olfactory receptor, family 1, subfamily C, member 1...
OR7D2                 0.519   olfactory receptor, family 7, subfamily D, member 2 ...
OR7D4                 0.518   olfactory receptor, family 7, subfamily D, member 4 ...
OR1I1                 0.514   olfactory receptor, family 1, subfamily I, member 1 ...
OR7G3                 0.514   olfactory receptor, family 7, subfamily G, member 3 ...
OR1G1                 0.513   olfactory receptor, family 1, subfamily G, member 1 ...
OR7C2                 0.513   olfactory receptor, family 7, subfamily C, member 2 ...
OR1A1                 0.511   olfactory receptor, family 1, subfamily A, member 1 [...
OR7A10                0.509   olfactory receptor, family 7, subfamily A, member 10...
OR7A17                0.504   olfactory receptor, family 7, subfamily A, member 17...
OR7C1                 0.504   olfactory receptor, family 7, subfamily C, member 1 ...
OR7G2                 0.503   olfactory receptor, family 7, subfamily G, member 2 ...
OR7A5                 0.492   olfactory receptor, family 7, subfamily A, member 5 [...
OR1A2                 0.487   olfactory receptor, family 1, subfamily A, member 2 [...
OR7E24                0.484   olfactory receptor, family 7, subfamily E, member 2...
OR1L1                 0.482   olfactory receptor, family 1, subfamily L, member 1...
OR7G1                 0.479   olfactory receptor, family 7, subfamily G, member 1 ...
OR1D2                 0.477   olfactory receptor, family 1, subfamily D, member 2 [...
OR1Q1                 0.475   olfactory receptor, family 1, subfamily Q, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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