Guide to the Human Genome
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Name: OR1L3 Sequence: fasta or formatted (324aa) NCBI GI: 52546685
Description:

olfactory receptor, family 1, subfamily L, member 3

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         18           2
 C cysteine            3.7         12           2
 D aspartate           2.2          7           1
 E glutamate           1.9          6           1
 F phenylalanine       7.1         23           2
 G glycine             2.8          9           1
 H histidine           2.5          8           2
 I isoleucine          9.3         30           3
 K lysine              4.6         15           2
 L leucine            13.9         45           3
 M methionine          3.7         12           1
 N asparagine          5.2         17           1
 P proline             3.7         12           1
 Q glutamine           1.9          6           1
 R arginine            4.0         13           2
 S serine              9.9         32           2
 T threonine           5.9         19           2
 V valine              7.7         25           2
 W tryptophan          0.0          0           0
 Y tyrosine            4.6         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 1, subfamily L, member 3 ... 
OR1L1                 0.753   olfactory receptor, family 1, subfamily L, member 1...
OR1L8                 0.639   olfactory receptor, family 1, subfamily L, member 8 ...
OR1L6                 0.621   olfactory receptor, family 1, subfamily L, member 6 ...
OR1L4                 0.616   olfactory receptor, family 1, subfamily L, member 4 ...
OR1F1                 0.481   olfactory receptor, family 1, subfamily F, member 1 [...
OR1M1                 0.476   olfactory receptor, family 1, subfamily M, member 1 ...
OR1C1                 0.472   olfactory receptor, family 1, subfamily C, member 1...
OR1Q1                 0.467   olfactory receptor, family 1, subfamily Q, member 1 ...
OR1E1                 0.463   olfactory receptor, family 1, subfamily E, member 1...
OR1N2                 0.462   olfactory receptor, family 1, subfamily N, member 2 ...
OR1G1                 0.460   olfactory receptor, family 1, subfamily G, member 1 ...
OR1D2                 0.460   olfactory receptor, family 1, subfamily D, member 2 [...
OR1J2                 0.457   olfactory receptor, family 1, subfamily J, member 2 ...
OR1N1                 0.455   olfactory receptor, family 1, subfamily N, member 1 ...
OR1A1                 0.452   olfactory receptor, family 1, subfamily A, member 1 [...
OR1E2                 0.446   olfactory receptor, family 1, subfamily E, member 2 ...
OR7C1                 0.446   olfactory receptor, family 7, subfamily C, member 1 ...
OR1J1                 0.439   olfactory receptor, family 1, subfamily J, member 1 ...
OR7A5                 0.434   olfactory receptor, family 7, subfamily A, member 5 [...
OR5I1                 0.433   olfactory receptor, family 5, subfamily I, member 1 [...
OR5V1                 0.433   olfactory receptor, family 5, subfamily V, member 1 ...
OR1D5                 0.433   olfactory receptor, family 1, subfamily D, member 5 [...
OR1S2                 0.433   olfactory receptor, family 1, subfamily S, member 2 ...
OR10R2                0.431   olfactory receptor, family 10, subfamily R, member 2...
OR1D4                 0.431   olfactory receptor, family 1, subfamily D, member 4...
OR8D1                 0.431   olfactory receptor, family 8, subfamily D, member 1 ...
OR1S1                 0.431   olfactory receptor, family 1, subfamily S, member 1 ...
OR1J4                 0.428   olfactory receptor, family 1, subfamily J, member 4 ...
OR8U8                 0.426   olfactory receptor, family 8, subfamily U, member 8 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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