Guide to the Human Genome
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Name: OR1L4 Sequence: fasta or formatted (311aa) NCBI GI: 52546687
Description:

olfactory receptor, family 1, subfamily L, member 4

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.2         13           2
 C cysteine            3.2         10           1
 D aspartate           2.6          8           1
 E glutamate           1.0          3           1
 F phenylalanine       6.8         21           2
 G glycine             3.5         11           1
 H histidine           2.9          9           1
 I isoleucine          7.7         24           2
 K lysine              4.8         15           2
 L leucine            13.5         42           2
 M methionine          5.8         18           1
 N asparagine          2.9          9           1
 P proline             4.2         13           1
 Q glutamine           1.6          5           1
 R arginine            3.5         11           1
 S serine             10.9         34           3
 T threonine           6.4         20           2
 V valine              8.7         27           3
 W tryptophan          0.6          2           1
 Y tyrosine            5.1         16           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 1, subfamily L, member 4 ... 
OR1L6                 0.938   olfactory receptor, family 1, subfamily L, member 6 ...
OR1L1                 0.666   olfactory receptor, family 1, subfamily L, member 1...
OR1L3                 0.636   olfactory receptor, family 1, subfamily L, member 3 ...
OR1L8                 0.596   olfactory receptor, family 1, subfamily L, member 8 ...
OR1F1                 0.545   olfactory receptor, family 1, subfamily F, member 1 [...
OR1K1                 0.512   olfactory receptor, family 1, subfamily K, member 1 ...
OR1Q1                 0.508   olfactory receptor, family 1, subfamily Q, member 1 ...
OR1M1                 0.505   olfactory receptor, family 1, subfamily M, member 1 ...
OR1N2                 0.498   olfactory receptor, family 1, subfamily N, member 2 ...
OR7C1                 0.495   olfactory receptor, family 7, subfamily C, member 1 ...
OR1N1                 0.495   olfactory receptor, family 1, subfamily N, member 1 ...
OR1J1                 0.492   olfactory receptor, family 1, subfamily J, member 1 ...
OR1G1                 0.490   olfactory receptor, family 1, subfamily G, member 1 ...
OR1A1                 0.487   olfactory receptor, family 1, subfamily A, member 1 [...
OR1C1                 0.487   olfactory receptor, family 1, subfamily C, member 1...
OR7D4                 0.485   olfactory receptor, family 7, subfamily D, member 4 ...
OR7A5                 0.482   olfactory receptor, family 7, subfamily A, member 5 [...
OR1E1                 0.478   olfactory receptor, family 1, subfamily E, member 1...
OR7C2                 0.473   olfactory receptor, family 7, subfamily C, member 2 ...
OR5V1                 0.470   olfactory receptor, family 5, subfamily V, member 1 ...
OR7G3                 0.470   olfactory receptor, family 7, subfamily G, member 3 ...
OR7D2                 0.466   olfactory receptor, family 7, subfamily D, member 2 ...
OR1D2                 0.465   olfactory receptor, family 1, subfamily D, member 2 [...
OR1J2                 0.465   olfactory receptor, family 1, subfamily J, member 2 ...
OR1J4                 0.465   olfactory receptor, family 1, subfamily J, member 4 ...
OR1S1                 0.463   olfactory receptor, family 1, subfamily S, member 1 ...
OR1I1                 0.461   olfactory receptor, family 1, subfamily I, member 1 ...
OR1E2                 0.461   olfactory receptor, family 1, subfamily E, member 2 ...
OR2W1                 0.460   olfactory receptor, family 2, subfamily W, member 1 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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