Guide to the Human Genome
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Name: OR1L6 Sequence: fasta or formatted (347aa) NCBI GI: 52317170
Description:

olfactory receptor, family 1, subfamily L, member 6

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         18           2
 C cysteine            2.9         10           1
 D aspartate           3.2         11           1
 E glutamate           1.2          4           1
 F phenylalanine       6.6         23           2
 G glycine             2.9         10           1
 H histidine           2.3          8           1
 I isoleucine          6.9         24           2
 K lysine              4.9         17           2
 L leucine            14.4         50           3
 M methionine          5.8         20           1
 N asparagine          2.6          9           1
 P proline             4.6         16           1
 Q glutamine           2.0          7           1
 R arginine            4.9         17           1
 S serine             10.7         37           3
 T threonine           5.5         19           2
 V valine              8.1         28           2
 W tryptophan          0.3          1           1
 Y tyrosine            5.2         18           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 1, subfamily L, member 6 ... 
OR1L4                 0.846   olfactory receptor, family 1, subfamily L, member 4 ...
OR1L1                 0.601   olfactory receptor, family 1, subfamily L, member 1...
OR1L3                 0.578   olfactory receptor, family 1, subfamily L, member 3 ...
OR1L8                 0.539   olfactory receptor, family 1, subfamily L, member 8 ...
OR1F1                 0.493   olfactory receptor, family 1, subfamily F, member 1 [...
OR1M1                 0.460   olfactory receptor, family 1, subfamily M, member 1 ...
OR1K1                 0.460   olfactory receptor, family 1, subfamily K, member 1 ...
OR1Q1                 0.457   olfactory receptor, family 1, subfamily Q, member 1 ...
OR1N2                 0.454   olfactory receptor, family 1, subfamily N, member 2 ...
OR1N1                 0.445   olfactory receptor, family 1, subfamily N, member 1 ...
OR1A1                 0.443   olfactory receptor, family 1, subfamily A, member 1 [...
OR1J1                 0.442   olfactory receptor, family 1, subfamily J, member 1 ...
OR7C1                 0.439   olfactory receptor, family 7, subfamily C, member 1 ...
OR1C1                 0.437   olfactory receptor, family 1, subfamily C, member 1...
OR1G1                 0.436   olfactory receptor, family 1, subfamily G, member 1 ...
OR1E1                 0.428   olfactory receptor, family 1, subfamily E, member 1...
OR1D2                 0.428   olfactory receptor, family 1, subfamily D, member 2 [...
OR7D4                 0.428   olfactory receptor, family 7, subfamily D, member 4 ...
OR7A5                 0.428   olfactory receptor, family 7, subfamily A, member 5 [...
OR7C2                 0.424   olfactory receptor, family 7, subfamily C, member 2 ...
OR1J2                 0.422   olfactory receptor, family 1, subfamily J, member 2 ...
OR1J4                 0.419   olfactory receptor, family 1, subfamily J, member 4 ...
OR7D2                 0.419   olfactory receptor, family 7, subfamily D, member 2 ...
OR1I1                 0.419   olfactory receptor, family 1, subfamily I, member 1 ...
OR1S1                 0.418   olfactory receptor, family 1, subfamily S, member 1 ...
OR1E2                 0.416   olfactory receptor, family 1, subfamily E, member 2 ...
OR7G3                 0.416   olfactory receptor, family 7, subfamily G, member 3 ...
OR7A17                0.413   olfactory receptor, family 7, subfamily A, member 17...
OR5AU1                0.413   olfactory receptor, family 5, subfamily AU, member 1...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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