Guide to the Human Genome
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Name: OR1D2 Sequence: fasta or formatted (312aa) NCBI GI: 4505517
Description:

olfactory receptor, family 1, subfamily D, member 2

Referenced in:

Olfactory Receptors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         18           1
 C cysteine            3.5         11           2
 D aspartate           2.6          8           1
 E glutamate           1.6          5           1
 F phenylalanine       6.1         19           2
 G glycine             4.5         14           2
 H histidine           3.2         10           1
 I isoleucine          7.7         24           2
 K lysine              3.8         12           2
 L leucine            15.4         48           3
 M methionine          4.8         15           2
 N asparagine          3.5         11           1
 P proline             3.2         10           1
 Q glutamine           2.2          7           3
 R arginine            3.2         10           1
 S serine              8.3         26           2
 T threonine           6.1         19           2
 V valine              8.3         26           2
 W tryptophan          0.6          2           1
 Y tyrosine            5.4         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   olfactory receptor, family 1, subfamily D, member 2 [... 
OR1D4                 0.830   olfactory receptor, family 1, subfamily D, member 4...
OR1D5                 0.828   olfactory receptor, family 1, subfamily D, member 5 [...
OR1N2                 0.529   olfactory receptor, family 1, subfamily N, member 2 ...
OR7D4                 0.518   olfactory receptor, family 7, subfamily D, member 4 ...
OR7C1                 0.508   olfactory receptor, family 7, subfamily C, member 1 ...
OR1F1                 0.508   olfactory receptor, family 1, subfamily F, member 1 [...
OR1N1                 0.497   olfactory receptor, family 1, subfamily N, member 1 ...
OR1E1                 0.497   olfactory receptor, family 1, subfamily E, member 1...
OR1M1                 0.497   olfactory receptor, family 1, subfamily M, member 1 ...
OR1S1                 0.494   olfactory receptor, family 1, subfamily S, member 1 ...
OR1L1                 0.491   olfactory receptor, family 1, subfamily L, member 1...
OR7C2                 0.491   olfactory receptor, family 7, subfamily C, member 2 ...
OR7D2                 0.489   olfactory receptor, family 7, subfamily D, member 2 ...
OR1E2                 0.489   olfactory receptor, family 1, subfamily E, member 2 ...
OR7G3                 0.487   olfactory receptor, family 7, subfamily G, member 3 ...
OR7A5                 0.484   olfactory receptor, family 7, subfamily A, member 5 [...
OR1G1                 0.482   olfactory receptor, family 1, subfamily G, member 1 ...
OR7A10                0.482   olfactory receptor, family 7, subfamily A, member 10...
OR1J2                 0.482   olfactory receptor, family 1, subfamily J, member 2 ...
OR1L8                 0.476   olfactory receptor, family 1, subfamily L, member 8 ...
OR1S2                 0.476   olfactory receptor, family 1, subfamily S, member 2 ...
OR1A1                 0.474   olfactory receptor, family 1, subfamily A, member 1 [...
OR7G2                 0.472   olfactory receptor, family 7, subfamily G, member 2 ...
OR1L6                 0.472   olfactory receptor, family 1, subfamily L, member 6 ...
OR1L3                 0.472   olfactory receptor, family 1, subfamily L, member 3 ...
OR1J4                 0.471   olfactory receptor, family 1, subfamily J, member 4 ...
OR7E24                0.469   olfactory receptor, family 7, subfamily E, member 2...
OR1C1                 0.464   olfactory receptor, family 1, subfamily C, member 1...
OR1L4                 0.462   olfactory receptor, family 1, subfamily L, member 4 ...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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