Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 239743762
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743762 PREDICTED: hypothetical protein XP_002342954 [Homo
sapiens]
(183 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743762 PREDICTED: hypothetical protein XP_002342954 [Homo ... 363 e-101
gi|149363632 coiled-coil domain containing 29 [Homo sapiens] 311 2e-85
gi|169217383 PREDICTED: similar to coiled-coil domain containing... 275 1e-74
gi|169178850 PREDICTED: similar to coiled-coil domain containing... 270 4e-73
gi|239750312 PREDICTED: similar to hCG1744891 [Homo sapiens] 255 2e-68
gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 228 2e-60
gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 228 2e-60
gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens] 228 2e-60
gi|239747109 PREDICTED: hypothetical protein XP_002344496 [Homo ... 226 8e-60
gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 224 4e-59
gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 224 4e-59
gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens] 224 4e-59
gi|239742325 PREDICTED: similar to coiled-coil domain containing... 195 2e-50
gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo sapiens] 165 2e-41
gi|154354990 ankyrin repeat domain 26 [Homo sapiens] 151 3e-37
gi|169169660 PREDICTED: hypothetical protein [Homo sapiens] 100 7e-22
gi|169169929 PREDICTED: hypothetical protein [Homo sapiens] 100 7e-22
gi|149363642 coiled-coil domain containing 144A [Homo sapiens] 84 9e-17
gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo ... 50 8e-07
gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens] 50 1e-06
gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo... 46 2e-05
gi|217272804 hyaluronan-mediated motility receptor isoform d [Ho... 46 2e-05
gi|217272802 hyaluronan-mediated motility receptor isoform a [Ho... 46 2e-05
gi|217416398 hyaluronan-mediated motility receptor isoform c [Ho... 46 2e-05
gi|217416394 hyaluronan-mediated motility receptor isoform b [Ho... 46 2e-05
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 45 3e-05
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 45 3e-05
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 44 6e-05
gi|71061468 centromere protein E [Homo sapiens] 44 6e-05
gi|187761324 shootin1 isoform a [Homo sapiens] 44 8e-05
>gi|239743762 PREDICTED: hypothetical protein XP_002342954 [Homo
sapiens]
Length = 183
Score = 363 bits (932), Expect = e-101
Identities = 183/183 (100%), Positives = 183/183 (100%)
Query: 1 MRHRPQRRNYFKWKVKYKKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKF 60
MRHRPQRRNYFKWKVKYKKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKF
Sbjct: 1 MRHRPQRRNYFKWKVKYKKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKF 60
Query: 61 DDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHME 120
DDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHME
Sbjct: 61 DDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHME 120
Query: 121 NNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIVAVLNTCSRLL 180
NNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIVAVLNTCSRLL
Sbjct: 121 NNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIVAVLNTCSRLL 180
Query: 181 TSL 183
TSL
Sbjct: 181 TSL 183
>gi|149363632 coiled-coil domain containing 29 [Homo sapiens]
Length = 161
Score = 311 bits (797), Expect = 2e-85
Identities = 157/161 (97%), Positives = 160/161 (99%)
Query: 23 MTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQ 82
MTINMLNVFGNEDFDCHGDLK DQLKMDILIKKLKQKFDDLTA+KEALSSKCVNLAKDNQ
Sbjct: 1 MTINMLNVFGNEDFDCHGDLKTDQLKMDILIKKLKQKFDDLTAQKEALSSKCVNLAKDNQ 60
Query: 83 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQ 142
VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVE+SKLQEYKLELDEKAMQ
Sbjct: 61 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVEISKLQEYKLELDEKAMQ 120
Query: 143 AVEKIEEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 183
AVEK+EEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL
Sbjct: 121 AVEKLEEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 161
>gi|169217383 PREDICTED: similar to coiled-coil domain containing 29
[Homo sapiens]
Length = 185
Score = 275 bits (704), Expect = 1e-74
Identities = 139/161 (86%), Positives = 149/161 (92%)
Query: 23 MTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQ 82
MTINMLNVFGNEDF CH DLK DQLKMDILIKKLKQKFDDLT E+EA+SSKCVNLAKDNQ
Sbjct: 1 MTINMLNVFGNEDFVCHEDLKTDQLKMDILIKKLKQKFDDLTPEEEAVSSKCVNLAKDNQ 60
Query: 83 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQ 142
V+QQE LSMKKVQQ+CEKLEEDKKML+EEILNLKTHMENN VELSKLQEYK E DE+A+Q
Sbjct: 61 VIQQELLSMKKVQQECEKLEEDKKMLEEEILNLKTHMENNMVELSKLQEYKSETDERAIQ 120
Query: 143 AVEKIEEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 183
AVEK+EEIHLQME DCVEQI RETKR VAVL+TCS LL+SL
Sbjct: 121 AVEKLEEIHLQMEADCVEQIIRETKRTVAVLDTCSHLLSSL 161
>gi|169178850 PREDICTED: similar to coiled-coil domain containing 29
[Homo sapiens]
Length = 197
Score = 270 bits (691), Expect = 4e-73
Identities = 136/161 (84%), Positives = 150/161 (93%)
Query: 23 MTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQ 82
MTINMLNVFGNEDF CH DLK DQLKMDILIKKLKQKFDDL AE+EA+SSKCVNL+KDNQ
Sbjct: 1 MTINMLNVFGNEDFVCHEDLKTDQLKMDILIKKLKQKFDDLMAEEEAVSSKCVNLSKDNQ 60
Query: 83 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQ 142
V+QQE LSMKKVQQ+CEKLEE++KML+EEILNLKTHMEN+ VELSKLQEYK ELDE+AMQ
Sbjct: 61 VIQQELLSMKKVQQECEKLEENQKMLEEEILNLKTHMENSMVELSKLQEYKSELDERAMQ 120
Query: 143 AVEKIEEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 183
AVEK++EIHLQMELDCVEQI RETKR VAVL+TC LL+SL
Sbjct: 121 AVEKLKEIHLQMELDCVEQIIRETKRTVAVLDTCCHLLSSL 161
>gi|239750312 PREDICTED: similar to hCG1744891 [Homo sapiens]
Length = 154
Score = 255 bits (651), Expect = 2e-68
Identities = 128/146 (87%), Positives = 136/146 (93%)
Query: 23 MTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQ 82
MTINMLNVFGNEDF CH DLK DQLKMDILIKKLKQKFDDLT E+EA+SSKCVNLAKDNQ
Sbjct: 1 MTINMLNVFGNEDFVCHEDLKTDQLKMDILIKKLKQKFDDLTPEEEAVSSKCVNLAKDNQ 60
Query: 83 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQ 142
V+QQE LSMKKVQQ+CEKLEEDKKML+EEILNLKTHMENN VELSKLQEYK E DE+A+Q
Sbjct: 61 VIQQELLSMKKVQQECEKLEEDKKMLEEEILNLKTHMENNMVELSKLQEYKSEPDERAIQ 120
Query: 143 AVEKIEEIHLQMELDCVEQITRETKR 168
AVEK+EEIHLQME DCVEQI RETKR
Sbjct: 121 AVEKLEEIHLQMEADCVEQIIRETKR 146
>gi|239755011 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1363
Score = 228 bits (581), Expect = 2e-60
Identities = 115/170 (67%), Positives = 135/170 (79%)
Query: 4 RPQRRNYFKWKVKYKKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDL 63
R + R + YKK LEMTINMLN F NEDF CHGDL DQLKMDIL KKLKQKFDDL
Sbjct: 802 RKKNRELEEEATGYKKCLEMTINMLNAFANEDFSCHGDLNTDQLKMDILFKKLKQKFDDL 861
Query: 64 TAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNR 123
AEKEA+SSKCVNLAKDN+VL QE LSM KVQ++CEKLE+DKKML+E++LNLKTHME +
Sbjct: 862 MAEKEAVSSKCVNLAKDNEVLHQELLSMGKVQEKCEKLEKDKKMLEEKVLNLKTHMEKDM 921
Query: 124 VELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIVAVL 173
VEL K+QEYK ELDE+AMQA+EK+EEIHLQ + + +Q+ + K A L
Sbjct: 922 VELGKVQEYKSELDERAMQAIEKLEEIHLQKQAEYEKQLEQLNKDNTASL 971
>gi|239749555 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1366
Score = 228 bits (581), Expect = 2e-60
Identities = 115/170 (67%), Positives = 135/170 (79%)
Query: 4 RPQRRNYFKWKVKYKKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDL 63
R + R + YKK LEMTINMLN F NEDF CHGDL DQLKMDIL KKLKQKFDDL
Sbjct: 831 RKKNRELEEEATGYKKCLEMTINMLNAFANEDFSCHGDLNTDQLKMDILFKKLKQKFDDL 890
Query: 64 TAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNR 123
AEKEA+SSKCVNLAKDN+VL QE LSM KVQ++CEKLE+DKKML+E++LNLKTHME +
Sbjct: 891 MAEKEAVSSKCVNLAKDNEVLHQELLSMGKVQEKCEKLEKDKKMLEEKVLNLKTHMEKDM 950
Query: 124 VELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIVAVL 173
VEL K+QEYK ELDE+AMQA+EK+EEIHLQ + + +Q+ + K A L
Sbjct: 951 VELGKVQEYKSELDERAMQAIEKLEEIHLQKQAEYEKQLEQLNKDNTASL 1000
>gi|239743705 PREDICTED: ankyrin repeat domain 18B [Homo sapiens]
Length = 1139
Score = 228 bits (581), Expect = 2e-60
Identities = 115/170 (67%), Positives = 135/170 (79%)
Query: 4 RPQRRNYFKWKVKYKKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDL 63
R + R + YKK LEMTINMLN F NEDF CHGDL DQLKMDIL KKLKQKFDDL
Sbjct: 831 RKKNRELEEEATGYKKCLEMTINMLNAFANEDFSCHGDLNTDQLKMDILFKKLKQKFDDL 890
Query: 64 TAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNR 123
AEKEA+SSKCVNLAKDN+VL QE LSM KVQ++CEKLE+DKKML+E++LNLKTHME +
Sbjct: 891 MAEKEAVSSKCVNLAKDNEVLHQELLSMGKVQEKCEKLEKDKKMLEEKVLNLKTHMEKDM 950
Query: 124 VELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIVAVL 173
VEL K+QEYK ELDE+AMQA+EK+EEIHLQ + + +Q+ + K A L
Sbjct: 951 VELGKVQEYKSELDERAMQAIEKLEEIHLQKQAEYEKQLEQLNKDNTASL 1000
>gi|239747109 PREDICTED: hypothetical protein XP_002344496 [Homo
sapiens]
Length = 146
Score = 226 bits (576), Expect = 8e-60
Identities = 114/139 (82%), Positives = 128/139 (92%), Gaps = 2/139 (1%)
Query: 23 MTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQ 82
MTINMLNVFGNEDF CH DLK DQLKMDILIKKLKQKFDDL AE+EA+SSKCVNL+KDNQ
Sbjct: 1 MTINMLNVFGNEDFVCHEDLKTDQLKMDILIKKLKQKFDDLMAEEEAVSSKCVNLSKDNQ 60
Query: 83 VLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQ 142
V+QQE LSMKKVQQ+CEKLEE++KML+EEILNLKTHMEN+ VELSKLQEYK ELDE+AMQ
Sbjct: 61 VIQQELLSMKKVQQECEKLEENQKMLEEEILNLKTHMENSMVELSKLQEYKSELDERAMQ 120
Query: 143 AVEKIEEIHLQMELDCVEQ 161
AVEK++EIHLQ + C+ Q
Sbjct: 121 AVEKLKEIHLQ--VTCLNQ 137
>gi|239755047 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 224 bits (570), Expect = 4e-59
Identities = 112/170 (65%), Positives = 134/170 (78%)
Query: 4 RPQRRNYFKWKVKYKKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDL 63
R + R + YKK LEMTINMLN F NEDF CHGDL DQLKMDIL KKLKQKF+DL
Sbjct: 801 RKKNRELEEEATGYKKCLEMTINMLNAFANEDFSCHGDLNTDQLKMDILFKKLKQKFNDL 860
Query: 64 TAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNR 123
AEKEA+SS+CVNLAKDN+VL QE LSM+ VQ++CEKLE+DKKML+EE+LNLKTHME +
Sbjct: 861 VAEKEAVSSECVNLAKDNEVLHQELLSMRNVQEKCEKLEKDKKMLEEEVLNLKTHMEKDM 920
Query: 124 VELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIVAVL 173
VEL KLQEYK ELDE+A+Q +EK+EEIHLQ + + +Q+ + K A L
Sbjct: 921 VELGKLQEYKSELDERAVQEIEKLEEIHLQKQAEYEKQLEQLNKDNTASL 970
>gi|239749578 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1002
Score = 224 bits (570), Expect = 4e-59
Identities = 112/170 (65%), Positives = 134/170 (78%)
Query: 4 RPQRRNYFKWKVKYKKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDL 63
R + R + YKK LEMTINMLN F NEDF CHGDL DQLKMDIL KKLKQKF+DL
Sbjct: 694 RKKNRELEEEATGYKKCLEMTINMLNAFANEDFSCHGDLNTDQLKMDILFKKLKQKFNDL 753
Query: 64 TAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNR 123
AEKEA+SS+CVNLAKDN+VL QE LSM+ VQ++CEKLE+DKKML+EE+LNLKTHME +
Sbjct: 754 VAEKEAVSSECVNLAKDNEVLHQELLSMRNVQEKCEKLEKDKKMLEEEVLNLKTHMEKDM 813
Query: 124 VELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIVAVL 173
VEL KLQEYK ELDE+A+Q +EK+EEIHLQ + + +Q+ + K A L
Sbjct: 814 VELGKLQEYKSELDERAVQEIEKLEEIHLQKQAEYEKQLEQLNKDNTASL 863
>gi|239743724 PREDICTED: ankyrin repeat domain 18A [Homo sapiens]
Length = 1415
Score = 224 bits (570), Expect = 4e-59
Identities = 112/170 (65%), Positives = 134/170 (78%)
Query: 4 RPQRRNYFKWKVKYKKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDL 63
R + R + YKK LEMTINMLN F NEDF CHGDL DQLKMDIL KKLKQKF+DL
Sbjct: 801 RKKNRELEEEATGYKKCLEMTINMLNAFANEDFSCHGDLNTDQLKMDILFKKLKQKFNDL 860
Query: 64 TAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNR 123
AEKEA+SS+CVNLAKDN+VL QE LSM+ VQ++CEKLE+DKKML+EE+LNLKTHME +
Sbjct: 861 VAEKEAVSSECVNLAKDNEVLHQELLSMRNVQEKCEKLEKDKKMLEEEVLNLKTHMEKDM 920
Query: 124 VELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIVAVL 173
VEL KLQEYK ELDE+A+Q +EK+EEIHLQ + + +Q+ + K A L
Sbjct: 921 VELGKLQEYKSELDERAVQEIEKLEEIHLQKQAEYEKQLEQLNKDNTASL 970
>gi|239742325 PREDICTED: similar to coiled-coil domain containing 29
[Homo sapiens]
Length = 150
Score = 195 bits (495), Expect = 2e-50
Identities = 97/125 (77%), Positives = 115/125 (92%)
Query: 59 KFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTH 118
+FDDL AE+EA+SSKCVNLAKDNQV+QQE LSMKKVQQ+CEKLEE++KML+EEILNLKTH
Sbjct: 2 RFDDLMAEEEAVSSKCVNLAKDNQVIQQELLSMKKVQQECEKLEENQKMLEEEILNLKTH 61
Query: 119 MENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIVAVLNTCSR 178
MEN+ VELS+LQ+YK ELDE+AMQAVEK++EI+L ME DC+EQI RETKR AVL+TCS
Sbjct: 62 MENSIVELSELQDYKSELDERAMQAVEKLKEINLHMEPDCIEQIIRETKRTAAVLDTCSH 121
Query: 179 LLTSL 183
LL+SL
Sbjct: 122 LLSSL 126
>gi|239741279 PREDICTED: similar to FLJ00310 protein [Homo sapiens]
Length = 561
Score = 165 bits (417), Expect = 2e-41
Identities = 83/116 (71%), Positives = 100/116 (86%)
Query: 55 KLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILN 114
+++ +FDD AEKEA+SSKCVNLAK+ QV QQE LSMKKVQQ+CEKLEEDKKML+EEILN
Sbjct: 443 QVESQFDDFMAEKEAVSSKCVNLAKEIQVFQQELLSMKKVQQECEKLEEDKKMLEEEILN 502
Query: 115 LKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIV 170
LKTHMEN+ VELSKLQEYK ELDE+AMQAVEK+EEIHLQ + + +Q+ + K I+
Sbjct: 503 LKTHMENSMVELSKLQEYKSELDERAMQAVEKLEEIHLQEQAEHKKQLEQLNKDII 558
>gi|154354990 ankyrin repeat domain 26 [Homo sapiens]
Length = 1710
Score = 151 bits (382), Expect = 3e-37
Identities = 74/153 (48%), Positives = 109/153 (71%), Gaps = 1/153 (0%)
Query: 17 YKKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVN 76
+K LL+MT LN + N +F HGDLK Q +MDI I KLK K DDLTAE E SKC++
Sbjct: 1363 FKNLLKMTRKKLNEYENGEFSFHGDLKTSQFEMDIQINKLKHKIDDLTAELETAGSKCLH 1422
Query: 77 LAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLEL 136
L NQ+LQ+E LSMK VQ++CEKL+++KK L++E++NL++H+E N VEL ++++YK E+
Sbjct: 1423 LDTKNQILQEELLSMKTVQKKCEKLQKNKKKLEQEVINLRSHIERNMVELGQVKQYKQEI 1482
Query: 137 DEKAMQAV-EKIEEIHLQMELDCVEQITRETKR 168
+E+A Q + EK++E++L ++ Q E R
Sbjct: 1483 EERARQEIAEKLKEVNLFLQAQAASQENLEQFR 1515
Score = 26.9 bits (58), Expect = 9.8
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 12/111 (10%)
Query: 38 CHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQ 97
C DLK + K + L K +KQ + LT + + L +N +L + + K+ +++
Sbjct: 942 CFEDLKIVKEKNEDLQKTIKQNEETLTQTISQYNGRLSVLTAENAMLNSKLENEKQSKER 1001
Query: 98 CEKLEE-----------DKKMLKEEILNLKTHMENNRVELSKLQEYKLELD 137
E E D+ + L+ + R E S+LQ+ K+ D
Sbjct: 1002 LEAEVESYHSRLAAAIHDRDQSETSKRELELAFQRARDECSRLQD-KMNFD 1051
>gi|169169660 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 100 bits (249), Expect = 7e-22
Identities = 52/100 (52%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 54 KKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEIL 113
K L++ +L + KC+ LAK NQV+QQE LSMK+VQQ+C+KLEE K+L++E++
Sbjct: 316 KFLRRHLMNLQQSWKLYLQKCLYLAKKNQVIQQELLSMKEVQQKCKKLEEVNKILEQEVV 375
Query: 114 NLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQ 153
NLKTH E N VE ++E KL+L+E+A Q +EK+EEI+LQ
Sbjct: 376 NLKTH-EKNMVEFGDVEECKLQLEERAGQEIEKLEEINLQ 414
>gi|169169929 PREDICTED: hypothetical protein [Homo sapiens]
Length = 460
Score = 100 bits (249), Expect = 7e-22
Identities = 52/100 (52%), Positives = 74/100 (74%), Gaps = 1/100 (1%)
Query: 54 KKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEIL 113
K L++ +L + KC+ LAK NQV+QQE LSMK+VQQ+C+KLEE K+L++E++
Sbjct: 316 KFLRRHLMNLQQSWKLYLQKCLYLAKKNQVIQQELLSMKEVQQKCKKLEEVNKILEQEVV 375
Query: 114 NLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQ 153
NLKTH E N VE ++E KL+L+E+A Q +EK+EEI+LQ
Sbjct: 376 NLKTH-EKNMVEFGDVEECKLQLEERAGQEIEKLEEINLQ 414
>gi|149363642 coiled-coil domain containing 144A [Homo sapiens]
Length = 1427
Score = 83.6 bits (205), Expect = 9e-17
Identities = 44/111 (39%), Positives = 75/111 (67%), Gaps = 3/111 (2%)
Query: 48 KMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQ--QEFLSMKKVQQQCEKLEEDK 105
+MD K+ + DLT +E + S+C++L +N+VLQ Q SMK +Q+QCE L+++K
Sbjct: 1112 RMDQCEKEKAGRKIDLTEAQETVPSRCLHLDAENEVLQLQQTLFSMKAIQKQCETLQKNK 1171
Query: 106 KMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAV-EKIEEIHLQME 155
K LK+E++NLK++ME N +E K + +KL ++E+A + + EK+ E L ++
Sbjct: 1172 KQLKQEVVNLKSYMERNMLERGKAEWHKLLIEERARKEIEEKLNEAILTLQ 1222
Score = 28.5 bits (62), Expect = 3.4
Identities = 29/136 (21%), Positives = 65/136 (47%), Gaps = 15/136 (11%)
Query: 46 QLKMDI--LIKKLKQKFD--DLTAEKEALSSKCVNLAKDNQVLQQEFLSMK--------- 92
QLK ++ L+K+L+ + DL ++ + K ++ +D ++LQ + L+ K
Sbjct: 742 QLKWNLRRLVKELRTVRNNLDLVVQERNDAQKQLSEEQDARILQDQILTSKQKELEMARK 801
Query: 93 KVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEE--I 150
K+ + + +K L E L+ + R+E+ ++ + ++K + +E ++E
Sbjct: 802 KMNSEISHRHQKEKDLFHEDCMLQEEIALLRLEIDTIKNQNKQKEKKYFEDIEAVKEKND 861
Query: 151 HLQMELDCVEQITRET 166
+LQ + E+ ET
Sbjct: 862 NLQKIIKLNEETLTET 877
>gi|110611903 myosin, heavy polypeptide 4, skeletal muscle [Homo
sapiens]
Length = 1939
Score = 50.4 bits (119), Expect = 8e-07
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 6/131 (4%)
Query: 41 DLKADQLKMDILIK---KLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQ 97
DL+ ++ K++ L K KL+Q+ DDL E C++L + + L+ + +K Q+
Sbjct: 1013 DLQMEEDKVNTLTKAKTKLEQQVDDLEGSLEQEKKLCMDLERAKRKLEGD---LKLAQES 1069
Query: 98 CEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELD 157
E DK+ L E++ + M N + ++ Q ++L +K + +IEE+ ++E +
Sbjct: 1070 TMDTENDKQQLNEKLKKKEFEMSNLQGKIEDEQALAIQLQKKIKELQARIEELEEEIEAE 1129
Query: 158 CVEQITRETKR 168
+ E +R
Sbjct: 1130 RASRAKAEKQR 1140
Score = 47.0 bits (110), Expect = 9e-06
Identities = 32/120 (26%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 54 KKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQE----FLSMKKVQQQCEKLEEDKKMLK 109
KKL Q+ D EA++SKC +L K Q LQ E + +++ C L++ ++
Sbjct: 1395 KKLAQRLQDAEEHVEAVNSKCASLEKTKQRLQNEVEDLMIDVERSNAACIALDKKQRNFD 1454
Query: 110 EEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRI 169
+ + K E + EL Q+ L + + EE LD +E + RE K +
Sbjct: 1455 KVLAEWKQKYEETQAELEASQKESRSLSTELFKVKNAYEE-----SLDHLETLKRENKNL 1509
Score = 42.0 bits (97), Expect = 3e-04
Identities = 46/178 (25%), Positives = 78/178 (43%), Gaps = 35/178 (19%)
Query: 12 KWKVKYKKLLEMTINM--------LNVFGNEDFDCHGDLKADQL-----KMDILIKKLKQ 58
K + K K+L E + + L V D + + DQL +++ IK++ +
Sbjct: 869 KTEAKRKELEEKMVTLMQEKNDLQLQVQAEADALADAEERCDQLIKTKIQLEAKIKEVTE 928
Query: 59 KFDD-------LTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEE 111
+ +D LTA+K L +C L KD L+ L++ KV+++ E K L EE
Sbjct: 929 RAEDEEEINAELTAKKRKLEDECSELKKDIDDLE---LTLAKVEKEKHATENKVKNLTEE 985
Query: 112 ILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRI 169
+ L ++KL + K L E Q ++ LQME D V +T+ ++
Sbjct: 986 MAGLDE-------TIAKLTKEKKALQEAHQQTLDD-----LQMEEDKVNTLTKAKTKL 1031
Score = 41.6 bits (96), Expect = 4e-04
Identities = 28/118 (23%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 42 LKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQC--- 98
L Q D ++ + KQK+++ AE EA K+++ L E +K ++
Sbjct: 1446 LDKKQRNFDKVLAEWKQKYEETQAELEASQ-------KESRSLSTELFKVKNAYEESLDH 1498
Query: 99 -EKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQME 155
E L+ + K L++EI +L + + +L++ K +LD + + +EE +E
Sbjct: 1499 LETLKRENKNLQQEISDLTEQIAEGGKHIHELEKVKKQLDHEKSELQTSLEEAEASLE 1556
Score = 33.1 bits (74), Expect = 0.14
Identities = 13/49 (26%), Positives = 31/49 (63%)
Query: 109 KEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELD 157
++E+ N+K E + EL+K + + EL+EK + +++ ++ LQ++ +
Sbjct: 850 EKEMANMKEEFEKTKEELAKTEAKRKELEEKMVTLMQEKNDLQLQVQAE 898
Score = 32.7 bits (73), Expect = 0.18
Identities = 25/103 (24%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 48 KMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQV-LQQEFLSMKKVQQQCEKLEEDKK 106
K + +K+++ ++ T + EA ++ D+ L ++ S+++V+Q KLE++K
Sbjct: 1170 KREAEFQKMRRDLEESTLQHEATAAALRKKHADSVAELGEQIDSLQRVKQ---KLEKEKS 1226
Query: 107 MLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEE 149
LK EI +L ++ME + ++ L+++ + K EE
Sbjct: 1227 ELKMEINDLASNMETVSKAKANFEKMCRTLEDQLSEIKTKEEE 1269
Score = 29.6 bits (65), Expect = 1.5
Identities = 25/141 (17%), Positives = 66/141 (46%), Gaps = 13/141 (9%)
Query: 15 VKYKKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDI-----LIKKLKQKFDDLTAEKEA 69
++ KK +E +N + + N H + +A + ++ ++K + DD ++
Sbjct: 1616 LRIKKKMEGDLNEMEIQLN-----HANRQAAEALRNLRNTQGILKDTQLHLDDAIRGQDD 1670
Query: 70 LSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKL 129
L + + + ++Q E +++++ E+ E +KM ++E+L+ ++ + + L
Sbjct: 1671 LKEQLAMVERRANLMQAE---VEELRASLERTERGRKMAEQELLDASERVQLLHTQNTSL 1727
Query: 130 QEYKLELDEKAMQAVEKIEEI 150
K +L+ Q ++E+I
Sbjct: 1728 INTKKKLETDISQIQGEMEDI 1748
Score = 28.9 bits (63), Expect = 2.6
Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 56 LKQKFDDLTAEKEALSSKCVNLAKDN-QVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILN 114
L++++++ E+EA + ++K N +V Q Q+ E+LEE KK L + + +
Sbjct: 1347 LREQYEE---EQEAKAELQRGMSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQD 1403
Query: 115 LKTHMENNRVELSKLQEYKLELDEKAMQAVEKIE 148
+ H+E + + L++ K L + + +E
Sbjct: 1404 AEEHVEAVNSKCASLEKTKQRLQNEVEDLMIDVE 1437
Score = 28.5 bits (62), Expect = 3.4
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 18/125 (14%)
Query: 18 KKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNL 77
+KL + M N+ G + D +A +++ IK+L+ + ++L E EA +
Sbjct: 1082 EKLKKKEFEMSNLQGKIE-----DEQALAIQLQKKIKELQARIEELEEEIEAERASRAKA 1136
Query: 78 AKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELD 137
K L +E LEE + L+E +E N+ ++ Q+ + +L+
Sbjct: 1137 EKQRSDLSRE-------------LEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLE 1183
Query: 138 EKAMQ 142
E +Q
Sbjct: 1184 ESTLQ 1188
>gi|62243484 sarcoma antigen NY-SAR-41 [Homo sapiens]
Length = 1417
Score = 50.1 bits (118), Expect = 1e-06
Identities = 40/176 (22%), Positives = 90/176 (51%), Gaps = 13/176 (7%)
Query: 20 LLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFD---DLTAEK-EALSSKCV 75
+L+ T+ ++ +G+L+ Q K++ + KL+Q+ + +AEK + KC
Sbjct: 906 ILQHTLQQQQQMLQQETIRNGELEDTQTKLEKQVSKLEQELQKQRESSAEKLRKMEEKCE 965
Query: 76 NLAKDNQVLQQEFLSM----KKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSK--- 128
+ A + + +Q+ + + ++V+ + ++ +E+ +++EI++LK EN + LS+
Sbjct: 966 SAAHEADLKRQKVIELTGTARQVKIEMDQYKEELSKMEKEIMHLKRDGENKAMHLSQLDM 1025
Query: 129 -LQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 183
L + K EL EK AV+++E++ E + E + + + N L ++L
Sbjct: 1026 ILDQTKTEL-EKKTNAVKELEKLQHSTETELTEALQKREVLETELQNAHGELKSTL 1080
Score = 42.0 bits (97), Expect = 3e-04
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 54 KKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEIL 113
KK+ +K + + AE+E L N K+N K++Q++C + + ++LKE++
Sbjct: 375 KKVAEKLEKVQAEEEILERNLTNCEKEN----------KRLQERCGLYKSELEILKEKLR 424
Query: 114 NLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEI-HLQMELDCVEQITRE 165
LK N + KL+ ++ E Q E + I L+ EL+ ++I R+
Sbjct: 425 QLKEENNNGK---EKLRIMAVKNSEVMAQLTESRQSILKLESELENKDEILRD 474
Score = 37.4 bits (85), Expect = 0.007
Identities = 24/105 (22%), Positives = 45/105 (42%), Gaps = 3/105 (2%)
Query: 53 IKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEI 112
I++L+ K + AE L + Q++Q+E L KLE + ++
Sbjct: 643 IEELRTKLIQIEAENSDLKVNMAHRTSQFQLIQEELLEKAS---NSSKLESEMTKKCSQL 699
Query: 113 LNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELD 157
L L+ +E V S + EL+++ M+ EKI + + +
Sbjct: 700 LTLEKQLEEKIVAYSSIAAKNAELEQELMEKNEKIRSLETNINTE 744
Score = 35.4 bits (80), Expect = 0.028
Identities = 26/130 (20%), Positives = 60/130 (46%), Gaps = 18/130 (13%)
Query: 39 HGDLKADQL----KMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKV 94
+ DLK + + ++ ++L +K + + + ++ KC L + L+++ ++ +
Sbjct: 657 NSDLKVNMAHRTSQFQLIQEELLEKASNSSKLESEMTKKCSQLLTLEKQLEEKIVAYSSI 716
Query: 95 QQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQM 154
+ +LE++ E+I +L+T++ EK A EK ++IHL+
Sbjct: 717 AAKNAELEQELMEKNEKIRSLETNINTEH--------------EKICLAFEKAKKIHLEQ 762
Query: 155 ELDCVEQITR 164
+ +QI R
Sbjct: 763 HKEMEKQIER 772
Score = 33.1 bits (74), Expect = 0.14
Identities = 28/115 (24%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 41 DLKADQLKMDILIKK----LKQKFDDLT----AEKEALSSKCVNLAKDNQVLQQEFLSMK 92
D K + L+MD +K+ LKQ+ +T +E + K L++ L +K
Sbjct: 1120 DKKQELLEMDQALKERNWELKQRAAQVTHLDMTIREHRGEMEQKIIKLEGTLEKSELELK 1179
Query: 93 KVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKI 147
+ +Q E L + + KE++ + M N E+S+L++ ++E ++ M+ +E +
Sbjct: 1180 ECNKQIESLNDKLQNAKEQLREKEFIMLQNEQEISQLKK-EIERTQQRMKEMESV 1233
Score = 28.1 bits (61), Expect = 4.4
Identities = 20/106 (18%), Positives = 54/106 (50%), Gaps = 3/106 (2%)
Query: 41 DLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMK-KVQQQCE 99
D+ DQ K ++ +K +L + + ++ + +VL+ E + +++
Sbjct: 1024 DMILDQTKTEL--EKKTNAVKELEKLQHSTETELTEALQKREVLETELQNAHGELKSTLR 1081
Query: 100 KLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVE 145
+L+E + +L++ L+L+ + ++L+E K+E+++K + +E
Sbjct: 1082 QLQELRDVLQKAQLSLEEKYTTIKDLTAELRECKMEIEDKKQELLE 1127
>gi|115527082 myosin, heavy chain 1, skeletal muscle, adult [Homo
sapiens]
Length = 1939
Score = 46.2 bits (108), Expect = 2e-05
Identities = 31/120 (25%), Positives = 52/120 (43%), Gaps = 9/120 (7%)
Query: 54 KKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQE----FLSMKKVQQQCEKLEEDKKMLK 109
KKL Q+ D EA+++KC +L K Q LQ E + +++ C L++ ++
Sbjct: 1395 KKLAQRLQDAEEHVEAVNAKCASLEKTKQRLQNEVEDLMIDVERTNAACAALDKKQRNFD 1454
Query: 110 EEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRI 169
+ + K E EL Q+ L + + EE LD +E + RE K +
Sbjct: 1455 KILAEWKQKCEETHAELEASQKESRSLSTELFKIKNAYEE-----SLDQLETLKRENKNL 1509
Score = 42.4 bits (98), Expect = 2e-04
Identities = 49/195 (25%), Positives = 84/195 (43%), Gaps = 30/195 (15%)
Query: 12 KWKVKYKKLLEMTINM--------LNVFGNEDFDCHGDLKADQL-----KMDILIKKLKQ 58
K + K K+L E + + L V D + + DQL +++ IK++ +
Sbjct: 869 KTEAKRKELEEKMVTLMQEKNDLQLQVQAEADSLADAEERCDQLIKTKIQLEAKIKEVTE 928
Query: 59 KFDD-------LTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEE 111
+ +D LTA+K L +C L KD L+ L++ KV+++ E K L EE
Sbjct: 929 RAEDEEEINAELTAKKRKLEDECSELKKDIDDLE---LTLAKVEKEKHATENKVKNLTEE 985
Query: 112 ILNLKTHMENNRVELSKLQEY------KLELDEKAMQAVEKIEEIHLQMELDCVEQITRE 165
+ L + E LQE L+ +E + + K +I L+ ++D +E +
Sbjct: 986 MAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDKVNTLTK-AKIKLEQQVDDLEGSLEQ 1044
Query: 166 TKRIVAVLNTCSRLL 180
K+I L R L
Sbjct: 1045 EKKIRMDLERAKRKL 1059
Score = 38.5 bits (88), Expect = 0.003
Identities = 27/118 (22%), Positives = 55/118 (46%), Gaps = 11/118 (9%)
Query: 42 LKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQ----Q 97
L Q D ++ + KQK ++ AE EA K+++ L E +K + Q
Sbjct: 1446 LDKKQRNFDKILAEWKQKCEETHAELEASQ-------KESRSLSTELFKIKNAYEESLDQ 1498
Query: 98 CEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQME 155
E L+ + K L++EI +L + + +L++ K +++++ + +EE +E
Sbjct: 1499 LETLKRENKNLQQEISDLTEQIAEGGKRIHELEKIKKQVEQEKSELQAALEEAEASLE 1556
Score = 35.4 bits (80), Expect = 0.028
Identities = 39/137 (28%), Positives = 68/137 (49%), Gaps = 32/137 (23%)
Query: 41 DLKADQLKMDILIK---KLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQ 97
DL+A++ K++ L K KL+Q+ DDL L+QE +++
Sbjct: 1013 DLQAEEDKVNTLTKAKIKLEQQVDDLEGS-----------------LEQEKKIRMDLERA 1055
Query: 98 CEKLEEDKKMLKEEILNLKT-------HMENNRVELSKLQEYKLELDEKA--MQAVEKIE 148
KLE D K+ +E ++++ ++ E+S LQ K+E DE+A MQ +KI+
Sbjct: 1056 KRKLEGDLKLAQESTMDIENDKQQLDEKLKKKEFEMSGLQS-KIE-DEQALGMQLQKKIK 1113
Query: 149 EIHLQMELDCVEQITRE 165
E+ ++E + E+I E
Sbjct: 1114 ELQARIE-ELEEEIEAE 1129
Score = 33.1 bits (74), Expect = 0.14
Identities = 13/49 (26%), Positives = 31/49 (63%)
Query: 109 KEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELD 157
++E+ N+K E + EL+K + + EL+EK + +++ ++ LQ++ +
Sbjct: 850 EKEMANMKEEFEKTKEELAKTEAKRKELEEKMVTLMQEKNDLQLQVQAE 898
Score = 33.1 bits (74), Expect = 0.14
Identities = 24/136 (17%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 15 VKYKKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKC 74
++ KK +E +N + + N + + ++K + DD +E L +
Sbjct: 1616 IRLKKKMEGDLNEMEIQLNHANRMAAEALRNYRNTQAILKDTQLHLDDALRSQEDLKEQL 1675
Query: 75 VNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKL 134
+ + +LQ E +++++ E+ E +K+ ++E+L+ ++ + + L K
Sbjct: 1676 AMVERRANLLQAE---IEELRATLEQTERSRKIAEQELLDASERVQLLHTQNTSLINTKK 1732
Query: 135 ELDEKAMQAVEKIEEI 150
+L+ Q ++E+I
Sbjct: 1733 KLETDISQIQGEMEDI 1748
Score = 32.0 bits (71), Expect = 0.30
Identities = 24/103 (23%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
Query: 48 KMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQV-LQQEFLSMKKVQQQCEKLEEDKK 106
K + +K+++ ++ T + EA ++ D+ L ++ ++++V+Q KLE++K
Sbjct: 1170 KREAEFQKMRRDLEEATLQHEATAATLRKKHADSVAELGEQIDNLQRVKQ---KLEKEKS 1226
Query: 107 MLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEE 149
+K EI +L ++ME L++ L+++ + K EE
Sbjct: 1227 EMKMEIDDLASNMETVSKAKGNLEKMCRALEDQLSEIKTKEEE 1269
Score = 29.6 bits (65), Expect = 1.5
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 15/117 (12%)
Query: 41 DLKADQLKMDILIKK-------LKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKK 93
D++ D+ ++D +KK L+ K +D A L K L + L++E + +
Sbjct: 1072 DIENDKQQLDEKLKKKEFEMSGLQSKIEDEQALGMQLQKKIKELQARIEELEEEIEAERA 1131
Query: 94 VQQQCEK--------LEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQ 142
+ + EK LEE + L+E +E N+ ++ Q+ + +L+E +Q
Sbjct: 1132 SRAKAEKQRSDLSRELEEISERLEEAGGATSAQIEMNKKREAEFQKMRRDLEEATLQ 1188
Score = 28.9 bits (63), Expect = 2.6
Identities = 22/94 (23%), Positives = 47/94 (50%), Gaps = 4/94 (4%)
Query: 56 LKQKFDDLTAEKEALSSKCVNLAKDN-QVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILN 114
L++++++ E+EA + ++K N +V Q Q+ E+LEE KK L + + +
Sbjct: 1347 LREQYEE---EQEAKAELQRAMSKANSEVAQWRTKYETDAIQRTEELEEAKKKLAQRLQD 1403
Query: 115 LKTHMENNRVELSKLQEYKLELDEKAMQAVEKIE 148
+ H+E + + L++ K L + + +E
Sbjct: 1404 AEEHVEAVNAKCASLEKTKQRLQNEVEDLMIDVE 1437
>gi|217272804 hyaluronan-mediated motility receptor isoform d [Homo
sapiens]
Length = 638
Score = 45.8 bits (107), Expect = 2e-05
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 34 EDFDCHGDLKADQLKMDI--LIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEF-LS 90
E+ C D + ++ K+DI L + LK+K D++ + K++L V L+K + L + L
Sbjct: 152 EEISCASD-QVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLL 210
Query: 91 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEI 150
K+ + + E + L E+ NLK + E KLQ+ +L++D Q E +
Sbjct: 211 EKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSL 270
Query: 151 HLQM 154
H ++
Sbjct: 271 HQKL 274
Score = 37.0 bits (84), Expect = 0.009
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 18 KKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNL 77
K L +++ ++ + + G + A Q M++ ++ ++ ++ + L K V++
Sbjct: 75 KNLRILSLELMKLRNKRETKMRG-MMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSI 133
Query: 78 AKDN-------QVLQQEFLSMKKVQQQCEK-------LEEDKKMLKEEILNLKTHMENNR 123
K+ + L + + Q EK LEE+ K +EIL+LK +E N
Sbjct: 134 EKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENI 193
Query: 124 VELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRI 169
V LSK E +L+ K Q +EK +E H+ + E + E + +
Sbjct: 194 VILSKQVE---DLNVKC-QLLEKEKEDHVNRNREHNENLNAEMQNL 235
Score = 33.5 bits (75), Expect = 0.10
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 18/129 (13%)
Query: 42 LKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLS----MKKVQQQ 97
L+ +L++D L+++ K+ L + L S + K+ + ++E + K+QQ+
Sbjct: 249 LQQKELQIDSLLQQEKELSSSL---HQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQK 305
Query: 98 CEK-------LEEDKKMLKEEILNLKTHMENNRVELSKLQ----EYKLELDEKAMQAVEK 146
E+ LEE+ K EE+ L+ ++ EL K + L L EK V+
Sbjct: 306 EEQAERLVKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQATLLLQEKYDSMVQS 365
Query: 147 IEEIHLQME 155
+E++ Q E
Sbjct: 366 LEDVTAQFE 374
Score = 29.3 bits (64), Expect = 2.0
Identities = 25/135 (18%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 41 DLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEF------LSMKKV 94
DL+ + KM+ + ++ L+A L + + L + N++L+ +F +++ +
Sbjct: 21 DLETELEKMEARLNAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRIL 80
Query: 95 QQQCEKLEEDKK------MLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIE 148
+ KL ++ M K+E + +K + +E S+ + +LE +++ + E
Sbjct: 81 SLELMKLRNKRETKMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDE 140
Query: 149 EIHLQMELDCVEQIT 163
+ + L+ +E+I+
Sbjct: 141 KSETEKLLEYIEEIS 155
>gi|217272802 hyaluronan-mediated motility receptor isoform a [Homo
sapiens]
Length = 725
Score = 45.8 bits (107), Expect = 2e-05
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 34 EDFDCHGDLKADQLKMDI--LIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEF-LS 90
E+ C D + ++ K+DI L + LK+K D++ + K++L V L+K + L + L
Sbjct: 239 EEISCASD-QVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLL 297
Query: 91 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEI 150
K+ + + E + L E+ NLK + E KLQ+ +L++D Q E +
Sbjct: 298 EKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSL 357
Query: 151 HLQM 154
H ++
Sbjct: 358 HQKL 361
Score = 37.0 bits (84), Expect = 0.009
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 18 KKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNL 77
K L +++ ++ + + G + A Q M++ ++ ++ ++ + L K V++
Sbjct: 162 KNLRILSLELMKLRNKRETKMRG-MMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSI 220
Query: 78 AKDN-------QVLQQEFLSMKKVQQQCEK-------LEEDKKMLKEEILNLKTHMENNR 123
K+ + L + + Q EK LEE+ K +EIL+LK +E N
Sbjct: 221 EKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENI 280
Query: 124 VELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRI 169
V LSK E +L+ K Q +EK +E H+ + E + E + +
Sbjct: 281 VILSKQVE---DLNVKC-QLLEKEKEDHVNRNREHNENLNAEMQNL 322
Score = 33.5 bits (75), Expect = 0.10
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 18/129 (13%)
Query: 42 LKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLS----MKKVQQQ 97
L+ +L++D L+++ K+ L + L S + K+ + ++E + K+QQ+
Sbjct: 336 LQQKELQIDSLLQQEKELSSSL---HQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQK 392
Query: 98 CEK-------LEEDKKMLKEEILNLKTHMENNRVELSKLQ----EYKLELDEKAMQAVEK 146
E+ LEE+ K EE+ L+ ++ EL K + L L EK V+
Sbjct: 393 EEQAERLVKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQATLLLQEKYDSMVQS 452
Query: 147 IEEIHLQME 155
+E++ Q E
Sbjct: 453 LEDVTAQFE 461
Score = 29.6 bits (65), Expect = 1.5
Identities = 32/158 (20%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 19 KLLEMTIN-MLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNL 77
K+LE I +L G +D DL+ + KM+ + ++ L+A L + + L
Sbjct: 86 KILEKEIRVLLQERGAQDRRIQ-DLETELEKMEARLNAALREKTSLSANNATLEKQLIEL 144
Query: 78 AKDNQVLQQEF------LSMKKVQQQCEKLEEDKK------MLKEEILNLKTHMENNRVE 125
+ N++L+ +F +++ + + KL ++ M K+E + +K + +E
Sbjct: 145 TRTNELLKSKFSENGNQKNLRILSLELMKLRNKRETKMRGMMAKQEGMEMKLQVTQRSLE 204
Query: 126 LSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQIT 163
S+ + +LE +++ + E+ + L+ +E+I+
Sbjct: 205 ESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEEIS 242
>gi|217416398 hyaluronan-mediated motility receptor isoform c [Homo
sapiens]
Length = 709
Score = 45.8 bits (107), Expect = 2e-05
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 34 EDFDCHGDLKADQLKMDI--LIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEF-LS 90
E+ C D + ++ K+DI L + LK+K D++ + K++L V L+K + L + L
Sbjct: 223 EEISCASD-QVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLL 281
Query: 91 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEI 150
K+ + + E + L E+ NLK + E KLQ+ +L++D Q E +
Sbjct: 282 EKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSL 341
Query: 151 HLQM 154
H ++
Sbjct: 342 HQKL 345
Score = 37.0 bits (84), Expect = 0.009
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 18 KKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNL 77
K L +++ ++ + + G + A Q M++ ++ ++ ++ + L K V++
Sbjct: 146 KNLRILSLELMKLRNKRETKMRG-MMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSI 204
Query: 78 AKDN-------QVLQQEFLSMKKVQQQCEK-------LEEDKKMLKEEILNLKTHMENNR 123
K+ + L + + Q EK LEE+ K +EIL+LK +E N
Sbjct: 205 EKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENI 264
Query: 124 VELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRI 169
V LSK E +L+ K Q +EK +E H+ + E + E + +
Sbjct: 265 VILSKQVE---DLNVKC-QLLEKEKEDHVNRNREHNENLNAEMQNL 306
Score = 33.5 bits (75), Expect = 0.10
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 18/129 (13%)
Query: 42 LKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLS----MKKVQQQ 97
L+ +L++D L+++ K+ L + L S + K+ + ++E + K+QQ+
Sbjct: 320 LQQKELQIDSLLQQEKELSSSL---HQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQK 376
Query: 98 CEK-------LEEDKKMLKEEILNLKTHMENNRVELSKLQ----EYKLELDEKAMQAVEK 146
E+ LEE+ K EE+ L+ ++ EL K + L L EK V+
Sbjct: 377 EEQAERLVKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQATLLLQEKYDSMVQS 436
Query: 147 IEEIHLQME 155
+E++ Q E
Sbjct: 437 LEDVTAQFE 445
Score = 29.3 bits (64), Expect = 2.0
Identities = 25/135 (18%), Positives = 64/135 (47%), Gaps = 12/135 (8%)
Query: 41 DLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEF------LSMKKV 94
DL+ + KM+ + ++ L+A L + + L + N++L+ +F +++ +
Sbjct: 92 DLETELEKMEARLNAALREKTSLSANNATLEKQLIELTRTNELLKSKFSENGNQKNLRIL 151
Query: 95 QQQCEKLEEDKK------MLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIE 148
+ KL ++ M K+E + +K + +E S+ + +LE +++ + E
Sbjct: 152 SLELMKLRNKRETKMRGMMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSIEKEKIDE 211
Query: 149 EIHLQMELDCVEQIT 163
+ + L+ +E+I+
Sbjct: 212 KSETEKLLEYIEEIS 226
>gi|217416394 hyaluronan-mediated motility receptor isoform b [Homo
sapiens]
Length = 724
Score = 45.8 bits (107), Expect = 2e-05
Identities = 34/124 (27%), Positives = 62/124 (50%), Gaps = 4/124 (3%)
Query: 34 EDFDCHGDLKADQLKMDI--LIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEF-LS 90
E+ C D + ++ K+DI L + LK+K D++ + K++L V L+K + L + L
Sbjct: 238 EEISCASD-QVEKYKLDIAQLEENLKEKNDEILSLKQSLEENIVILSKQVEDLNVKCQLL 296
Query: 91 MKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEI 150
K+ + + E + L E+ NLK + E KLQ+ +L++D Q E +
Sbjct: 297 EKEKEDHVNRNREHNENLNAEMQNLKQKFILEQQEREKLQQKELQIDSLLQQEKELSSSL 356
Query: 151 HLQM 154
H ++
Sbjct: 357 HQKL 360
Score = 37.0 bits (84), Expect = 0.009
Identities = 39/166 (23%), Positives = 75/166 (45%), Gaps = 19/166 (11%)
Query: 18 KKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNL 77
K L +++ ++ + + G + A Q M++ ++ ++ ++ + L K V++
Sbjct: 161 KNLRILSLELMKLRNKRETKMRG-MMAKQEGMEMKLQVTQRSLEESQGKIAQLEGKLVSI 219
Query: 78 AKDN-------QVLQQEFLSMKKVQQQCEK-------LEEDKKMLKEEILNLKTHMENNR 123
K+ + L + + Q EK LEE+ K +EIL+LK +E N
Sbjct: 220 EKEKIDEKSETEKLLEYIEEISCASDQVEKYKLDIAQLEENLKEKNDEILSLKQSLEENI 279
Query: 124 VELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRI 169
V LSK E +L+ K Q +EK +E H+ + E + E + +
Sbjct: 280 VILSKQVE---DLNVKC-QLLEKEKEDHVNRNREHNENLNAEMQNL 321
Score = 33.5 bits (75), Expect = 0.10
Identities = 32/129 (24%), Positives = 60/129 (46%), Gaps = 18/129 (13%)
Query: 42 LKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLS----MKKVQQQ 97
L+ +L++D L+++ K+ L + L S + K+ + ++E + K+QQ+
Sbjct: 335 LQQKELQIDSLLQQEKELSSSL---HQKLCSFQEEMVKEKNLFEEELKQTLDELDKLQQK 391
Query: 98 CEK-------LEEDKKMLKEEILNLKTHMENNRVELSKLQ----EYKLELDEKAMQAVEK 146
E+ LEE+ K EE+ L+ ++ EL K + L L EK V+
Sbjct: 392 EEQAERLVKQLEEEAKSRAEELKLLEEKLKGKEAELEKSSAAHTQATLLLQEKYDSMVQS 451
Query: 147 IEEIHLQME 155
+E++ Q E
Sbjct: 452 LEDVTAQFE 460
Score = 29.6 bits (65), Expect = 1.5
Identities = 32/158 (20%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 19 KLLEMTIN-MLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNL 77
K+LE I +L G +D DL+ + KM+ + ++ L+A L + + L
Sbjct: 85 KILEKEIRVLLQERGAQDRRIQ-DLETELEKMEARLNAALREKTSLSANNATLEKQLIEL 143
Query: 78 AKDNQVLQQEF------LSMKKVQQQCEKLEEDKK------MLKEEILNLKTHMENNRVE 125
+ N++L+ +F +++ + + KL ++ M K+E + +K + +E
Sbjct: 144 TRTNELLKSKFSENGNQKNLRILSLELMKLRNKRETKMRGMMAKQEGMEMKLQVTQRSLE 203
Query: 126 LSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQIT 163
S+ + +LE +++ + E+ + L+ +E+I+
Sbjct: 204 ESQGKIAQLEGKLVSIEKEKIDEKSETEKLLEYIEEIS 241
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 45.4 bits (106), Expect = 3e-05
Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 11/151 (7%)
Query: 21 LEMTINMLNVFGNEDFDCHGDLKAD-QLKMDILIK----KLKQKFD---DLTAEKEALSS 72
LE ++N LN NE + L + K ++L+ K Q+ D L + AL
Sbjct: 619 LETSVNELNSQLNESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTAQNALQD 678
Query: 73 KCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEY 132
K L K L Q ++ Q+ C +LE K KE+ L+L+ E ++ KL+
Sbjct: 679 KQQELNKITTQLDQVTAKLQDKQEHCSQLESHLKEYKEKYLSLEQKTEELEGQIKKLEAD 738
Query: 133 KLEL---DEKAMQAVEKIEEIHLQMELDCVE 160
LE+ E+A+Q +++ +++ +EL E
Sbjct: 739 SLEVKASKEQALQDLQQQRQLNTDLELRATE 769
Score = 39.7 bits (91), Expect = 0.001
Identities = 25/117 (21%), Positives = 58/117 (49%), Gaps = 4/117 (3%)
Query: 42 LKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEF----LSMKKVQQQ 97
L + LK + KL++K ++ + K+ + + D Q LQ S+ ++ +
Sbjct: 307 LTENLLKKEQDYTKLEEKHNEESVSKKNIQATLHQKDLDCQQLQSRLSASETSLHRIHVE 366
Query: 98 CEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQM 154
+ E + LKEE+ ++T ++ + E +LQ+ + E ++ +Q +I ++H ++
Sbjct: 367 LSEKGEATQKLKEELSEVETKYQHLKAEFKQLQQQREEKEQHGLQLQSEINQLHSKL 423
Score = 38.5 bits (88), Expect = 0.003
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 53 IKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQ----QEFLSMKKVQQQCEKLEEDKKML 108
++KLK ++LT + + L+ + +D L+ +E +S K +Q + + D + L
Sbjct: 290 LQKLKSSVNELTQKNQTLTENLLKKEQDYTKLEEKHNEESVSKKNIQATLHQKDLDCQQL 349
Query: 109 KEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKR 168
+ + +T + VELS+ E +L E+ + K + HL+ E ++Q E ++
Sbjct: 350 QSRLSASETSLHRIHVELSEKGEATQKLKEELSEVETKYQ--HLKAEFKQLQQQREEKEQ 407
Score = 37.7 bits (86), Expect = 0.006
Identities = 27/102 (26%), Positives = 59/102 (57%), Gaps = 14/102 (13%)
Query: 46 QLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDK 105
QL D+ ++ + L EKE +SS ++L K ++ L+ ++Q+ K EE+K
Sbjct: 758 QLNTDLELRATELS-KQLEMEKEIVSSTRLDLQKKSEALES-------IKQKLTKQEEEK 809
Query: 106 KMLKE--EILNLKTHME----NNRVELSKLQEYKLELDEKAM 141
++LK+ E L+ +T ++ NNR++ + + K++++++A+
Sbjct: 810 QILKQDFETLSQETKIQHEELNNRIQTTVTELQKVKMEKEAL 851
Score = 37.4 bits (85), Expect = 0.007
Identities = 26/127 (20%), Positives = 61/127 (48%), Gaps = 11/127 (8%)
Query: 40 GDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCV----------NLAKDNQVLQQEFL 89
GD ++ L++K K+ L E+E L +K L + N LQ++
Sbjct: 519 GDKDQKIQNLEALLQKSKENISLLEKEREDLYAKIQAGEGETAVLNQLQEKNHTLQEQVT 578
Query: 90 SM-KKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIE 148
+ +K++ Q E ++ ++ L +++ K H+ + + L+ EL+ + ++ EK+
Sbjct: 579 QLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLSLETSVNELNSQLNESKEKVS 638
Query: 149 EIHLQME 155
++ +Q++
Sbjct: 639 QLDIQIK 645
Score = 33.5 bits (75), Expect = 0.10
Identities = 26/128 (20%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 43 KADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEF--------LSMKKV 94
+ D K ++ +KQK EK+ L L+++ ++ +E ++KV
Sbjct: 785 RLDLQKKSEALESIKQKLTKQEEEKQILKQDFETLSQETKIQHEELNNRIQTTVTELQKV 844
Query: 95 QQQCEKLEEDKKMLKEEILNLKTHMENNRVELSK-LQEYKLELDEKAMQAVEKIEEIHLQ 153
+ + E L + +K+++ + ++N++ E K Q+ K + + E ++ +Q
Sbjct: 845 KMEKEALMTELSTVKDKLSKVSDSLKNSKSEFEKENQKGKAAILDLEKTCKELKHQLQVQ 904
Query: 154 MELDCVEQ 161
ME EQ
Sbjct: 905 MENTLKEQ 912
Score = 32.3 bits (72), Expect = 0.23
Identities = 28/103 (27%), Positives = 56/103 (54%), Gaps = 8/103 (7%)
Query: 43 KADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLE 102
KA QL +I +K K+D+ + +EA K L ++ L +E ++ ++ + +
Sbjct: 164 KAAQLATEIA--DIKSKYDEERSLREAAEQKVTRLTEE---LNKEATVIQDLKTELLQRP 218
Query: 103 --EDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQA 143
ED +LK+E++ ++T M+N +E + E KL+ + K +Q+
Sbjct: 219 GIEDVAVLKKELVQVQTLMDNMTLERERESE-KLKDECKKLQS 260
Score = 31.6 bits (70), Expect = 0.40
Identities = 40/165 (24%), Positives = 68/165 (41%), Gaps = 27/165 (16%)
Query: 46 QLKMDILIKKLKQKFDDLT-------------AEKEAL-SSKCVNLAKDNQVLQQEFLSM 91
QLK+ L ++LK+K + T E++AL S L + L+Q +
Sbjct: 459 QLKLSRLEEQLKEKVTNSTELQHQLDKTKQQHQEQQALQQSTTAKLREAQNDLEQVLRQI 518
Query: 92 KKVQQQCEKLEEDKKMLKEEILNLKTHMEN----------NRVELSKLQEYKLELDEKAM 141
Q+ + LE + KE I L+ E+ L++LQE L E+
Sbjct: 519 GDKDQKIQNLEALLQKSKENISLLEKEREDLYAKIQAGEGETAVLNQLQEKNHTLQEQVT 578
Query: 142 QAVEKIE---EIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 183
Q EK++ E H Q + + +Q+ + + A + L TS+
Sbjct: 579 QLTEKLKNQSESHKQAQENLHDQVQEQKAHLRAAQDRVLSLETSV 623
Score = 31.2 bits (69), Expect = 0.52
Identities = 25/97 (25%), Positives = 47/97 (48%)
Query: 46 QLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDK 105
Q++M+ +K+ K+ L EKEA + L + L Q ++K+ +++ ++L+ +
Sbjct: 902 QVQMENTLKEQKELKKSLEKEKEASHQLKLELNSMQEQLIQAQNTLKQNEKEEQQLQGNI 961
Query: 106 KMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQ 142
LK+ K +E + EL K EL+ K Q
Sbjct: 962 NELKQSSEQKKKQIEALQGELKIAVLQKTELENKLQQ 998
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 45.1 bits (105), Expect = 3e-05
Identities = 31/120 (25%), Positives = 53/120 (44%), Gaps = 9/120 (7%)
Query: 54 KKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQE----FLSMKKVQQQCEKLEEDKKMLK 109
KKL Q+ + EA+++KC +L K Q LQ E L +++ C L++ ++
Sbjct: 1394 KKLAQRLQEAEEHVEAVNAKCASLEKTKQRLQNEVEDLMLDVERSNAACAALDKKQRNFD 1453
Query: 110 EEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRI 169
+ + K E + EL Q+ L + + EE LD +E + RE K +
Sbjct: 1454 KVLSEWKQKYEETQAELEASQKESRSLSTELFKVKNVYEE-----SLDQLETLRRENKNL 1508
Score = 42.7 bits (99), Expect = 2e-04
Identities = 28/118 (23%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Query: 42 LKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQ----Q 97
L Q D ++ + KQK+++ AE EA K+++ L E +K V + Q
Sbjct: 1445 LDKKQRNFDKVLSEWKQKYEETQAELEASQ-------KESRSLSTELFKVKNVYEESLDQ 1497
Query: 98 CEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQME 155
E L + K L++EI +L + ++ +L++ K +++++ + +EE +E
Sbjct: 1498 LETLRRENKNLQQEISDLTEQIAEGGKQIHELEKIKKQVEQEKCEIQAALEEAEASLE 1555
Score = 37.7 bits (86), Expect = 0.006
Identities = 35/145 (24%), Positives = 66/145 (45%), Gaps = 34/145 (23%)
Query: 41 DLKADQLKMDILIK---KLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQ 97
DL+A++ K++IL K KL+Q+ DDL L+QE +++
Sbjct: 1012 DLQAEEDKVNILTKAKTKLEQQVDDLEGS-----------------LEQEKKLRMDLERA 1054
Query: 98 CEKLEEDKKMLKEEILNLKT-------HMENNRVELSKL-------QEYKLELDEKAMQA 143
KLE D K+ +E ++++ +E E+S L Q +++L +K +
Sbjct: 1055 KRKLEGDLKLAQESTMDMENDKQQLDEKLEKKEFEISNLISKIEDEQAVEIQLQKKIKEL 1114
Query: 144 VEKIEEIHLQMELDCVEQITRETKR 168
+IEE+ ++E + + E +R
Sbjct: 1115 QARIEELGEEIEAERASRAKAEKQR 1139
Score = 37.0 bits (84), Expect = 0.009
Identities = 33/132 (25%), Positives = 63/132 (47%), Gaps = 22/132 (16%)
Query: 45 DQLKMDILIKKLKQKFDD-------LTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQ 97
++++++ IK++ ++ ++ LTA+K L +C L KD L+ L++ KV+++
Sbjct: 914 NKIQLEAKIKEVTERAEEEEEINAELTAKKRKLEDECSELKKDIDDLE---LTLAKVEKE 970
Query: 98 CEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELD 157
E K L EE+ L ++KL + K L E Q ++ LQ E D
Sbjct: 971 KHATENKVKNLTEEMAGLDE-------TIAKLSKEKKALQETHQQTLD-----DLQAEED 1018
Query: 158 CVEQITRETKRI 169
V +T+ ++
Sbjct: 1019 KVNILTKAKTKL 1030
Score = 36.6 bits (83), Expect = 0.012
Identities = 27/115 (23%), Positives = 56/115 (48%), Gaps = 3/115 (2%)
Query: 41 DLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEK 100
+L+ + K++ +LK + DDL++ EA+S NL K + L+ + +K +++ ++
Sbjct: 1212 NLQRVKQKLEKEKSELKMETDDLSSNAEAISKAKGNLEKMCRSLEDQVSELKTKEEEQQR 1271
Query: 101 LEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQME 155
L D L + L+T +L + +L + ++IEE+ Q+E
Sbjct: 1272 LIND---LTAQRARLQTEAGEYSRQLDEKDALVSQLSRSKQASTQQIEELKHQLE 1323
Score = 32.3 bits (72), Expect = 0.23
Identities = 24/136 (17%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Query: 15 VKYKKLLEMTINMLNVFGNEDFDCHGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKC 74
++ KK +E +N + + N + + ++K+ + DD +E L +
Sbjct: 1615 LRVKKKMEGDLNEMEIQLNHANRLAAESLRNYRNTQGILKETQLHLDDALRGQEDLKEQL 1674
Query: 75 VNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKL 134
+ + +LQ E ++++ E+ E +K+ ++E+L+ ++ + + L K
Sbjct: 1675 AIVERRANLLQAE---IEELWATLEQTERSRKIAEQELLDASERVQLLHTQNTSLINTKK 1731
Query: 135 ELDEKAMQAVEKIEEI 150
+L+ Q ++EE+
Sbjct: 1732 KLENDVSQLQSEVEEV 1747
Score = 28.5 bits (62), Expect = 3.4
Identities = 28/125 (22%), Positives = 54/125 (43%), Gaps = 16/125 (12%)
Query: 41 DLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEK 100
D +A ++++ IK+L+ + ++L E EA + K L +E
Sbjct: 1099 DEQAVEIQLQKKIKELQARIEELGEEIEAERASRAKAEKQRSDLSRE------------- 1145
Query: 101 LEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQ---AVEKIEEIHLQMELD 157
LEE + L+E +E N+ ++ Q+ + +L+E +Q V + + H +
Sbjct: 1146 LEEISERLEEAGGATSAQVELNKKREAEFQKLRRDLEEATLQHEAMVAALRKKHADSMAE 1205
Query: 158 CVEQI 162
EQI
Sbjct: 1206 LGEQI 1210
Score = 28.1 bits (61), Expect = 4.4
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 96 QQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIE 148
Q+ E+LEE KK L + + + H+E + + L++ K L + + +E
Sbjct: 1384 QRTEELEEAKKKLAQRLQEAEEHVEAVNAKCASLEKTKQRLQNEVEDLMLDVE 1436
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 44.3 bits (103), Expect = 6e-05
Identities = 34/127 (26%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 52 LIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEE 111
+IK L ++ D L EK +C++L K+N ++QE V+ K+ + K L++
Sbjct: 70 IIKALTERLDALLLEKAETEQQCLSLKKENIKMKQE------VEDSVTKMGDAHKELEQS 123
Query: 112 ILNLKTHMENNRVEL----SKLQEYKLELDEKAMQAVEKIEEIHLQMEL-----DCVEQI 162
+N +EN + EL SK E K L ++ +A+ E+ Q++ D V+++
Sbjct: 124 HINYVKEIENLKNELMAVRSKYSEDKANLQKQLEEAMNTQLELSEQLKFQNNSEDNVKKL 183
Query: 163 TRETKRI 169
E ++I
Sbjct: 184 QEEIEKI 190
Score = 39.7 bits (91), Expect = 0.001
Identities = 35/133 (26%), Positives = 69/133 (51%), Gaps = 16/133 (12%)
Query: 56 LKQKFDDLTAEKEALSSKCVNLAKDNQVLQQE----FLSMKKVQQQCEKLE---EDKKML 108
L+++ +++ +EKEAL S + + N+ + E + +++V Q C K E E +K
Sbjct: 843 LRKELEEIQSEKEALQSDLLEMKNANEKTRLENQNLLIQVEEVSQTCSKSEIHNEKEKCF 902
Query: 109 KEEILNLKTHME-----NNRVELSKLQEYKLE---LDEKAMQAVEKIEEIHLQMELDCVE 160
+E NLK +E + R EL L++ + + + +V+++EE +E +C E
Sbjct: 903 IKEHENLKPLLEQKELRDRRAELILLKDSLAKSPSVKNDPLSSVKELEEKIENLEKECKE 962
Query: 161 QITRETK-RIVAV 172
+ + K ++VAV
Sbjct: 963 KEEKINKIKLVAV 975
Score = 34.7 bits (78), Expect = 0.047
Identities = 33/115 (28%), Positives = 56/115 (48%), Gaps = 16/115 (13%)
Query: 50 DILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQE----------FLSMKK---VQQ 96
D ++KL + L+ +KE LS++ +L ++N L E FLS K+ +++
Sbjct: 663 DQKLEKLMVQMKVLSEDKEVLSAEVKSLYEENNKLSSEKKQLSRDLEVFLSQKEDVILKE 722
Query: 97 QCEKLEEDKKMLKEEILNLKTHMENNRVE--LSKLQEYKLELDEKAMQAVEKIEE 149
+LE+ +++ EE NL +EN +V+ K Q Y L E + E EE
Sbjct: 723 HITQLEKKLQLMVEEQDNLNKLLENEQVQKLFVKTQLYGF-LKEMGSEVSEDSEE 776
Score = 30.4 bits (67), Expect = 0.89
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 19/123 (15%)
Query: 41 DLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQ-----------QEFL 89
D + ++L + I+ LK++ ++L EK+ +L + ++LQ QEF
Sbjct: 447 DSEKEKLTLMFEIQGLKEQCENLQQEKQEAILNYESLREIMEILQTELGESAGKISQEFE 506
Query: 90 SMKKVQQQCEKLEEDKKML------KEEILNLKTHMENNRVELSKLQEYKLELDEKAMQA 143
SMK QQQ + E ++ L K+ +L ++ +L QE EL+
Sbjct: 507 SMK--QQQASDVHELQQKLRTAFTEKDALLETVNRLQGENEKLLSQQELVPELENTIKNL 564
Query: 144 VEK 146
EK
Sbjct: 565 QEK 567
Score = 29.3 bits (64), Expect = 2.0
Identities = 20/103 (19%), Positives = 46/103 (44%)
Query: 53 IKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEI 112
+ +L+QK EK+AL L +N+ L + + +++ + L+E + +
Sbjct: 516 VHELQQKLRTAFTEKDALLETVNRLQGENEKLLSQQELVPELENTIKNLQEKNGVYLLSL 575
Query: 113 LNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQME 155
T ++ +++ L E K + K + E+++ H + E
Sbjct: 576 SQRDTMLKELEGKINSLTEEKDDFINKLKNSHEEMDNFHKKCE 618
Score = 29.3 bits (64), Expect = 2.0
Identities = 23/105 (21%), Positives = 49/105 (46%), Gaps = 7/105 (6%)
Query: 53 IKKLKQKFDDLTAEKEA---LSSKCVNLAKDNQV----LQQEFLSMKKVQQQCEKLEEDK 105
+ +L+ + + L +++E L + NL + N V L Q +K+++ + L E+K
Sbjct: 537 VNRLQGENEKLLSQQELVPELENTIKNLQEKNGVYLLSLSQRDTMLKELEGKINSLTEEK 596
Query: 106 KMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEI 150
++ N M+N + + + LEL +K Q ++ E+
Sbjct: 597 DDFINKLKNSHEEMDNFHKKCEREERLILELGKKVEQTIQYNSEL 641
Score = 26.9 bits (58), Expect = 9.8
Identities = 23/89 (25%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
Query: 73 KCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEY 132
K + L K+ + LQ+E + QCE+L+ + ++E + L+ +E + E LQ
Sbjct: 807 KVLELEKEIKCLQEESVV------QCEELKSLLRDYEQEKVLLRKELEEIQSEKEALQSD 860
Query: 133 KLELDEKAMQAVEKIEEIHLQMELDCVEQ 161
LE+ K ++E +L ++++ V Q
Sbjct: 861 LLEM--KNANEKTRLENQNLLIQVEEVSQ 887
>gi|71061468 centromere protein E [Homo sapiens]
Length = 2701
Score = 44.3 bits (103), Expect = 6e-05
Identities = 33/134 (24%), Positives = 72/134 (53%), Gaps = 10/134 (7%)
Query: 45 DQLKMDILIKKLKQKFDDLTAEKE-------ALSSKCVNLAKDNQVLQQEFLSMKKVQQQ 97
+Q ++ +L +LK++ + + EK LS C LA+ + L+++ +++ QQQ
Sbjct: 1083 NQEELRLLGDELKKQQEIVAQEKNHAIKKEGELSRTCDRLAEVEEKLKEKSQQLQEKQQQ 1142
Query: 98 CEKLEEDKKMLKE---EILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQM 154
++E+ +++ EI NLK ++N + L ++ +LEL +K + E+++ I +
Sbjct: 1143 LLNVQEEMSEMQKKINEIENLKNELKNKELTLEHMETERLELAQKLNENYEEVKSITKER 1202
Query: 155 ELDCVEQITRETKR 168
++ Q + ET+R
Sbjct: 1203 KVLKELQKSFETER 1216
Score = 42.0 bits (97), Expect = 3e-04
Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 57 KQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMK-----KVQQQCEKLEEDKKMLKEE 111
+QK+ + E E ++ + VNL+K+ Q ++K K Q+ EK E ++ L E
Sbjct: 830 EQKYKMVLEENERMNQEIVNLSKEAQKFDSSLGALKTELSYKTQELQEKTREVQERL-NE 888
Query: 112 ILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQI 162
+ LK +EN L ++ K + EK Q +E+++ L E D ++Q+
Sbjct: 889 MEQLKEQLENRDSTLQTVEREKTLITEKLQQTLEEVKT--LTQEKDDLKQL 937
Score = 35.0 bits (79), Expect = 0.036
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 35/167 (20%)
Query: 41 DLKADQLKMDILIKKLKQKFDDL---TAEKEALSSKCVNLAKDNQVL------------- 84
+LK+ +++ L K+++ K ++L T+EK+ L S+ V+ Q L
Sbjct: 748 ELKSLPSEVERLRKEIQDKSEELHIITSEKDKLFSEVVHKESRVQGLLEEIGKTKDDLAT 807
Query: 85 --------QQEFLSMKKVQQQCEK-----LEEDKKMLKEEILNLKTHMENNRVELSKLQE 131
QEF + K + E+ LEE+++M +EI+NL + L L
Sbjct: 808 TQSNYKSTDQEFQNFKTLHMDFEQKYKMVLEENERM-NQEIVNLSKEAQKFDSSLGAL-- 864
Query: 132 YKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIVAVLNTCSR 178
K EL K + EK E+ Q L+ +EQ+ + + + L T R
Sbjct: 865 -KTELSYKTQELQEKTREV--QERLNEMEQLKEQLENRDSTLQTVER 908
Score = 32.0 bits (71), Expect = 0.30
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 18/132 (13%)
Query: 53 IKKLKQKFDDLTAEKEALSSKCVNL----------AKDNQVLQQEFLSMKKVQQQCEKLE 102
IK L ++ D+L KEAL K L +++Q Q++ L+MK+ + K+
Sbjct: 1344 IKSLTKERDNLKTIKEALEVKHDQLKEHIRETLAKIQESQSKQEQSLNMKEKDNETTKIV 1403
Query: 103 EDKKMLKEEILNLKTHMENNRVELSK-LQEYKLELDEKAMQA--VEKIEEIHLQMELDCV 159
+ + K + L +E + LSK LQE E+ A + +++++E+ LQ E D
Sbjct: 1404 SEMEQFKPKDSAL-LRIEIEMLGLSKRLQESHDEMKSVAKEKDDLQRLQEV-LQSESD-- 1459
Query: 160 EQITRETKRIVA 171
Q+ K IVA
Sbjct: 1460 -QLKENIKEIVA 1470
Score = 31.2 bits (69), Expect = 0.52
Identities = 33/156 (21%), Positives = 72/156 (46%), Gaps = 12/156 (7%)
Query: 39 HGDLKADQLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEF----LSMKKV 94
H LK Q +D L + +K ++++ ++ L L + +Q+E + +K+
Sbjct: 1727 HMHLKEHQETIDKLRGIVSEKTNEISNMQKDLEHSNDALKAQDLKIQEELRIAHMHLKEQ 1786
Query: 95 QQQCEKLEEDKKMLKEEILNLKTHMENNRVEL-SKLQEYK------LELDEKAMQAVEKI 147
Q+ +KL +++ N++ +EN+ +L K+QE K + L + + +K+
Sbjct: 1787 QETIDKLRGIVSEKTDKLSNMQKDLENSNAKLQEKIQELKANEHQLITLKKDVNETQKKV 1846
Query: 148 EEIHLQMELDCVEQITRETKRIVAVLNTCSRLLTSL 183
E+ Q++ +Q +K + LN +L +L
Sbjct: 1847 SEME-QLKKQIKDQSLTLSKLEIENLNLAQKLHENL 1881
Score = 30.4 bits (67), Expect = 0.89
Identities = 25/93 (26%), Positives = 46/93 (49%), Gaps = 6/93 (6%)
Query: 79 KDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDE 138
KD+ L + + ++ ++ ++ +E+ K L +E NLKT E V+ +L+E+ E
Sbjct: 1318 KDSTTLARIEMERLRLNEKFQESQEEIKSLTKERDNLKTIKEALEVKHDQLKEHIRETLA 1377
Query: 139 KAMQAVEKIEEIHLQMELDCVEQITRETKRIVA 171
K ++ K E+ E D ET +IV+
Sbjct: 1378 KIQESQSKQEQSLNMKEKD------NETTKIVS 1404
Score = 30.0 bits (66), Expect = 1.2
Identities = 34/148 (22%), Positives = 67/148 (45%), Gaps = 27/148 (18%)
Query: 39 HGDLKADQLKMDILIKKLKQKFDDLTA---EKEALSSKCVNLAKDNQVLQQEFLSMKKVQ 95
H LK + ++ L L +K +++ + EA++ K N ++ +++F ++K++
Sbjct: 1483 HCCLKEQEETINELRVNLSEKETEISTIQKQLEAINDKLQNKIQEIYEKEEQF-NIKQIS 1541
Query: 96 QQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIE------- 148
+ EK+ E K+ K H + L ++ LEL + ++ E+I+
Sbjct: 1542 EVQEKVNELKQF--------KEHRKAKDSALQSIESKMLELTNRLQESQEEIQIMIKEKE 1593
Query: 149 -----EIHLQMELDCVEQITRETKRIVA 171
+ LQ+E D Q+ TK IVA
Sbjct: 1594 EMKRVQEALQIERD---QLKENTKEIVA 1618
Score = 29.3 bits (64), Expect = 2.0
Identities = 26/106 (24%), Positives = 47/106 (44%), Gaps = 4/106 (3%)
Query: 53 IKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKM----L 108
+++LK++ D + L + +NLA+ +E S+ K + ++EE K+ L
Sbjct: 1849 MEQLKKQIKDQSLTLSKLEIENLNLAQKLHENLEEMKSVMKERDNLRRVEETLKLERDQL 1908
Query: 109 KEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVEKIEEIHLQM 154
KE + K + EL + E E + EKI E +Q+
Sbjct: 1909 KESLQETKARDLEIQQELKTARMLSKEHKETVDKLREKISEKTIQI 1954
Score = 28.5 bits (62), Expect = 3.4
Identities = 29/132 (21%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Query: 56 LKQKFDDLTAEKEALSSKC---VNLAKDNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEI 112
LKQ + L E++ L S VN+ D Q +Q +++ ++Q E + K + EE+
Sbjct: 934 LKQLQESLQIERDQLKSDIHDTVNMNIDTQ--EQLRNALESLKQHQETINTLKSKISEEV 991
Query: 113 LNLKTHMENNRVEL-SKLQEYKLELDEKAMQAVEKIEEIHLQMELDCVEQITRETKRIVA 171
+ HME N E + Q+ + +D+K + + + ++ + + + R+ ++
Sbjct: 992 -SRNLHMEENTGETKDEFQQKMVGIDKKQDLEAKNTQTLTADVKDNEIIEQQRKIFSLIQ 1050
Query: 172 VLNTCSRLLTSL 183
N ++L S+
Sbjct: 1051 EKNELQQMLESV 1062
Score = 28.1 bits (61), Expect = 4.4
Identities = 27/130 (20%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 42 LKADQLKMDI--LIKKLKQ------KFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKK 93
++ DQLK + ++ K+K+ +F +TA E C + + + + L+++
Sbjct: 1604 IERDQLKENTKEIVAKMKESQEKEYQFLKMTAVNETQEKMC-EIEHLKEQFETQKLNLEN 1662
Query: 94 VQQQC--------EKLEEDKKMLKEEILNLKTHMENNRVELSKLQEYKLELDEKAMQAVE 145
++ + E LEE + + KE +L++ E +VE +L+E E + ++ E
Sbjct: 1663 IETENIRLTQILHENLEEMRSVTKERD-DLRSVEETLKVERDQLKENLRETITRDLEKQE 1721
Query: 146 KIEEIHLQME 155
+++ +H+ ++
Sbjct: 1722 ELKIVHMHLK 1731
>gi|187761324 shootin1 isoform a [Homo sapiens]
Length = 631
Score = 43.9 bits (102), Expect = 8e-05
Identities = 29/126 (23%), Positives = 65/126 (51%), Gaps = 22/126 (17%)
Query: 46 QLKMDILIKKLKQKFDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCEKLEEDK 105
+L D++ +++ +D T + + + CV++ Q+ K+++ Q ++E+K
Sbjct: 107 KLGPDVITEEINIDDEDSTTDTDGAAETCVSVQCQKQI--------KELRDQIVSVQEEK 158
Query: 106 KMLKEEILNLKTHMENNRVELSKLQEYKLELDEK--------------AMQAVEKIEEIH 151
K+L E+ NLK+ + E++K+++ K L+ + +M AVE+ EE+
Sbjct: 159 KILAIELENLKSKLVEVIEEVNKVKQEKTVLNSEVLEQRKVLEKCNRVSMLAVEEYEEMQ 218
Query: 152 LQMELD 157
+ +EL+
Sbjct: 219 VNLELE 224
Score = 30.8 bits (68), Expect = 0.68
Identities = 25/110 (22%), Positives = 55/110 (50%), Gaps = 16/110 (14%)
Query: 44 ADQLKMDILIKKLKQK----FDDLTAEKEALSSKCVNLAKDNQVLQQEFLSMKKVQQQCE 99
+D+ K LI LK++ ++DL AE + KC +++ Q+ ++KK+ E
Sbjct: 4 SDEEKQLQLITSLKEQAIGEYEDLRAENQKTKEKC------DKIRQERDEAVKKL----E 53
Query: 100 KLEEDKKMLKEEILNLKTHMENNRV--ELSKLQEYKLELDEKAMQAVEKI 147
+ ++ M+ EE+ ++ H+E + E ++ KL + K ++ + +
Sbjct: 54 EFQKISHMVIEEVNFMQNHLEIEKTCRESAEALATKLNKENKTLKRISML 103
Score = 30.8 bits (68), Expect = 0.68
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 19/148 (12%)
Query: 15 VKYKKLLEMT--INMLNVFGNEDFDCHGDL------KADQLKMDILIKKLKQKFDDLTAE 66
++ +K+LE ++ML V E+ + +L KA+ ++ I++ K K
Sbjct: 194 LEQRKVLEKCNRVSMLAVEEYEEMQVNLELEKDLRKKAESFAQEMFIEQNKLKRQSHLLL 253
Query: 67 KEALSSKCVNLAKDNQVLQQEFLSMKKVQ--QQCEKLEE--DKKMLKEEILNLKTHMENN 122
+ ++ + + A D + L +++Q Q+ ++LEE + + L +EI NLK +E
Sbjct: 254 QSSIPDQQLLKALDENAKLTQQLEEERIQHQQKVKELEEQLENETLHKEIHNLKQQLE-- 311
Query: 123 RVELSKLQEYKLELDEKAMQAVEKIEEI 150
L+E K EL+ K + EK +
Sbjct: 312 -----LLEEDKKELELKYQNSEEKARNL 334
Score = 30.4 bits (67), Expect = 0.89
Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 80 DNQVLQQEFLSMKKVQQQCEKLEEDKKMLKEEILNLKTHMENNRVELSKLQE 131
+N+ L +E ++K QQ E LEEDKK L+ + N + N + + +LQ+
Sbjct: 295 ENETLHKEIHNLK---QQLELLEEDKKELELKYQNSEEKARNLKHSVDELQK 343
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.359
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,965,377
Number of Sequences: 37866
Number of extensions: 244769
Number of successful extensions: 4564
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 317
Number of HSP's successfully gapped in prelim test: 527
Number of HSP's that attempted gapping in prelim test: 2241
Number of HSP's gapped (non-prelim): 2398
length of query: 183
length of database: 18,247,518
effective HSP length: 96
effective length of query: 87
effective length of database: 14,612,382
effective search space: 1271277234
effective search space used: 1271277234
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.