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Search of human proteins with 239743315
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239743315 PREDICTED: hypothetical protein XP_002342820 [Homo
sapiens]
(248 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743315 PREDICTED: hypothetical protein XP_002342820 [Homo ... 512 e-145
gi|239508997 PREDICTED: hypothetical protein [Homo sapiens] 512 e-145
gi|195947401 doublesex and mab-3 related transcription factor 2 ... 42 6e-04
gi|5729806 doublesex and mab-3 related transcription factor 2 is... 42 6e-04
gi|153945850 doublesex and mab-3 related transcription factor 2 ... 42 6e-04
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 37 0.012
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 37 0.012
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 36 0.036
gi|158854042 hypothetical protein LOC222183 [Homo sapiens] 35 0.046
gi|38045906 von Hippel-Lindau tumor suppressor isoform 2 [Homo s... 34 0.10
gi|4507891 von Hippel-Lindau tumor suppressor isoform 1 [Homo sa... 34 0.10
gi|19923084 polycystin-1L1 [Homo sapiens] 34 0.10
gi|239746476 PREDICTED: hypothetical protein [Homo sapiens] 33 0.18
gi|239752220 PREDICTED: hypothetical protein XP_002348149 [Homo ... 33 0.23
gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo ... 33 0.23
gi|239508715 PREDICTED: hypothetical protein [Homo sapiens] 33 0.23
gi|169171347 PREDICTED: hypothetical protein [Homo sapiens] 33 0.30
gi|239753310 PREDICTED: hypothetical protein XP_002345618 [Homo ... 33 0.30
gi|169172209 PREDICTED: hypothetical protein [Homo sapiens] 33 0.30
gi|169170953 PREDICTED: hypothetical protein [Homo sapiens] 33 0.30
gi|239741764 PREDICTED: hypothetical protein XP_002342289 [Homo ... 33 0.30
gi|239508753 PREDICTED: hypothetical protein [Homo sapiens] 33 0.30
gi|27777653 sperm acrosome associated 3 [Homo sapiens] 33 0.30
gi|116268127 kinase non-catalytic C-lobe domain (KIND) containin... 33 0.30
gi|239757419 PREDICTED: hypothetical protein [Homo sapiens] 32 0.39
gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo ... 32 0.39
gi|239751936 PREDICTED: hypothetical protein [Homo sapiens] 32 0.39
gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo ... 32 0.39
gi|239746741 PREDICTED: hypothetical protein XP_002343822 [Homo ... 32 0.39
gi|195947369 junction-mediating and regulatory protein [Homo sap... 32 0.39
>gi|239743315 PREDICTED: hypothetical protein XP_002342820 [Homo
sapiens]
Length = 248
Score = 512 bits (1319), Expect = e-145
Identities = 248/248 (100%), Positives = 248/248 (100%)
Query: 1 MSTSLVMKSFSCATPWRTVGCSGSIQASLALEAGVSMLPTFWTAWSQQEQGAAGAGVRVA 60
MSTSLVMKSFSCATPWRTVGCSGSIQASLALEAGVSMLPTFWTAWSQQEQGAAGAGVRVA
Sbjct: 1 MSTSLVMKSFSCATPWRTVGCSGSIQASLALEAGVSMLPTFWTAWSQQEQGAAGAGVRVA 60
Query: 61 LPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQTRAPGSPLPLGSVPDPR 120
LPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQTRAPGSPLPLGSVPDPR
Sbjct: 61 LPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQTRAPGSPLPLGSVPDPR 120
Query: 121 CDTASLPSPAGGGRTSCWAPGKRSRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSV 180
CDTASLPSPAGGGRTSCWAPGKRSRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSV
Sbjct: 121 CDTASLPSPAGGGRTSCWAPGKRSRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSV 180
Query: 181 CALCSSTSASVCGRCSLEHLRGTGRVGRGGRGQRQGHDRNSGSHSSQDTDTGDNTRVGRS 240
CALCSSTSASVCGRCSLEHLRGTGRVGRGGRGQRQGHDRNSGSHSSQDTDTGDNTRVGRS
Sbjct: 181 CALCSSTSASVCGRCSLEHLRGTGRVGRGGRGQRQGHDRNSGSHSSQDTDTGDNTRVGRS 240
Query: 241 TNTHADRA 248
TNTHADRA
Sbjct: 241 TNTHADRA 248
>gi|239508997 PREDICTED: hypothetical protein [Homo sapiens]
Length = 248
Score = 512 bits (1319), Expect = e-145
Identities = 248/248 (100%), Positives = 248/248 (100%)
Query: 1 MSTSLVMKSFSCATPWRTVGCSGSIQASLALEAGVSMLPTFWTAWSQQEQGAAGAGVRVA 60
MSTSLVMKSFSCATPWRTVGCSGSIQASLALEAGVSMLPTFWTAWSQQEQGAAGAGVRVA
Sbjct: 1 MSTSLVMKSFSCATPWRTVGCSGSIQASLALEAGVSMLPTFWTAWSQQEQGAAGAGVRVA 60
Query: 61 LPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQTRAPGSPLPLGSVPDPR 120
LPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQTRAPGSPLPLGSVPDPR
Sbjct: 61 LPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQTRAPGSPLPLGSVPDPR 120
Query: 121 CDTASLPSPAGGGRTSCWAPGKRSRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSV 180
CDTASLPSPAGGGRTSCWAPGKRSRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSV
Sbjct: 121 CDTASLPSPAGGGRTSCWAPGKRSRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSV 180
Query: 181 CALCSSTSASVCGRCSLEHLRGTGRVGRGGRGQRQGHDRNSGSHSSQDTDTGDNTRVGRS 240
CALCSSTSASVCGRCSLEHLRGTGRVGRGGRGQRQGHDRNSGSHSSQDTDTGDNTRVGRS
Sbjct: 181 CALCSSTSASVCGRCSLEHLRGTGRVGRGGRGQRQGHDRNSGSHSSQDTDTGDNTRVGRS 240
Query: 241 TNTHADRA 248
TNTHADRA
Sbjct: 241 TNTHADRA 248
>gi|195947401 doublesex and mab-3 related transcription factor 2
isoform 1 [Homo sapiens]
Length = 226
Score = 41.6 bits (96), Expect = 6e-04
Identities = 41/118 (34%), Positives = 48/118 (40%), Gaps = 20/118 (16%)
Query: 71 DGGGEEAQAQEAGDGDERYILEGC--GRARAGVPQTRAPGSP--LPLGSVPDPRCDTASL 126
D G + A+E GDG+E G + G PQ R P +P P G+ P RC
Sbjct: 51 DDDGVDEDAEEEGDGEEAGASPGMPGQPEQRGGPQPRPPLAPQASPAGTGPRERC----- 105
Query: 127 PSPAGGGRTSCWAPGKRSRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSVCALC 184
+PAGGG P K SRT K AR H L R RW CA C
Sbjct: 106 -TPAGGGA----EPRKLSRT-----PKCAR-CRNHGVVSCLKGHKRFCRWRDCQCANC 152
>gi|5729806 doublesex and mab-3 related transcription factor 2
isoform 1 [Homo sapiens]
Length = 226
Score = 41.6 bits (96), Expect = 6e-04
Identities = 41/118 (34%), Positives = 48/118 (40%), Gaps = 20/118 (16%)
Query: 71 DGGGEEAQAQEAGDGDERYILEGC--GRARAGVPQTRAPGSP--LPLGSVPDPRCDTASL 126
D G + A+E GDG+E G + G PQ R P +P P G+ P RC
Sbjct: 51 DDDGVDEDAEEEGDGEEAGASPGMPGQPEQRGGPQPRPPLAPQASPAGTGPRERC----- 105
Query: 127 PSPAGGGRTSCWAPGKRSRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSVCALC 184
+PAGGG P K SRT K AR H L R RW CA C
Sbjct: 106 -TPAGGGA----EPRKLSRT-----PKCAR-CRNHGVVSCLKGHKRFCRWRDCQCANC 152
>gi|153945850 doublesex and mab-3 related transcription factor 2
isoform 2 [Homo sapiens]
Length = 561
Score = 41.6 bits (96), Expect = 6e-04
Identities = 41/118 (34%), Positives = 48/118 (40%), Gaps = 20/118 (16%)
Query: 71 DGGGEEAQAQEAGDGDERYILEGC--GRARAGVPQTRAPGSP--LPLGSVPDPRCDTASL 126
D G + A+E GDG+E G + G PQ R P +P P G+ P RC
Sbjct: 51 DDDGVDEDAEEEGDGEEAGASPGMPGQPEQRGGPQPRPPLAPQASPAGTGPRERC----- 105
Query: 127 PSPAGGGRTSCWAPGKRSRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSVCALC 184
+PAGGG P K SRT K AR H L R RW CA C
Sbjct: 106 -TPAGGGA----EPRKLSRT-----PKCAR-CRNHGVVSCLKGHKRFCRWRDCQCANC 152
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 37.4 bits (85), Expect = 0.012
Identities = 41/157 (26%), Positives = 59/157 (37%), Gaps = 28/157 (17%)
Query: 46 SQQEQGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQTR 105
S+Q Q A AG H GGG + Q G G + G A A +TR
Sbjct: 545 SRQRQKAVAAGAT----------SHGGGGNK---QSRGGGGNKPRQWGQTAAAA---KTR 588
Query: 106 APGSPLPLGSVPDPRCDTASLPSPAGGGRTSCW---APGKRSRTRRKSWRKVARTTAGHA 162
G P + S +G G W A G +++R+K WR+ + A
Sbjct: 589 GGGDKQPGWQ----KAAAGVTKSRSGDGGKKAWRQKAAGTGAKSRKKPWRRGQKDAAAAE 644
Query: 163 RTERLSALSRA-----PRWARSVCALCSSTSASVCGR 194
+ A SR PRW + A S++A+ G+
Sbjct: 645 KAWATGATSRGSGGKQPRWQKPAAAGSESSAAAAVGQ 681
Score = 28.1 bits (61), Expect = 7.4
Identities = 35/128 (27%), Positives = 45/128 (35%), Gaps = 14/128 (10%)
Query: 45 WSQQEQGAAGAGVRVALPQ--VEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVP 102
W Q+ AAG+ R A Q G GGE+ Q A R G R G
Sbjct: 140 WRAQKSAAAGSKNRGAGAQKAAAAAGVKSQGGEKPQKAAAAGAKSR---SGKKPRRRGAK 196
Query: 103 QT-------RAPGSPLPLGSVPDPRCDTASLPSPAGGGRTSCWAPGKRSRTRRKSWRKVA 155
R + G R P PA GG S GK+ + +R+ +K A
Sbjct: 197 SRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPAAGGAKSRRGGGKKPQKQRRRGQKAA 256
Query: 156 RTTAGHAR 163
T G +R
Sbjct: 257 --TGGKSR 262
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 37.4 bits (85), Expect = 0.012
Identities = 45/149 (30%), Positives = 62/149 (41%), Gaps = 28/149 (18%)
Query: 95 GRARAGVP-----QTRAPGSPLPLGSVPDPRCDTASLPSPAGGGRTSCWAPGKRSRTR-- 147
GR+R+ P +TR+P P R + +PA GR+ P +R R+R
Sbjct: 613 GRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSR 672
Query: 148 ---RKSWRKVARTTAGHARTERLSALSRAPRWARSVCALCSSTSASVCGRCSLEHLRGTG 204
R+S R +RT A R+ SR PR RS S S GR H R
Sbjct: 673 TPARRSGRSRSRTPARRGRSR-----SRTPRRGRS-----RSRSLVRRGR---SHSRTPQ 719
Query: 205 RVGRGG-----RGQRQGHDRNSGSHSSQD 228
R GR G + + + R S S+SS +
Sbjct: 720 RRGRSGSSSERKNKSRTSQRRSRSNSSPE 748
Score = 31.6 bits (70), Expect = 0.67
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 27/108 (25%)
Query: 133 GRTSCWAPGKRSRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSVCALCSSTSASVC 192
GR+ A KR R+R ++ T GH+R SR+P+W R S SA
Sbjct: 482 GRSRSPATAKRGRSRSRT-----PTKRGHSR-------SRSPQWRR-------SRSAQRW 522
Query: 193 GRCSLEHLRGTGRVGRGGRGQRQGHDRNSGSHSSQDTDTGDNTRVGRS 240
GR R R GR QR G R S ++Q + R GRS
Sbjct: 523 GRS-----RSPQRRGRSRSPQRPGWSR---SRNTQRRGRSRSARRGRS 562
Score = 30.8 bits (68), Expect = 1.1
Identities = 41/144 (28%), Positives = 53/144 (36%), Gaps = 22/144 (15%)
Query: 97 ARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSPAGGGRTSCWAPG-KRSRTR-------- 147
AR G ++R P P R + +PA GR+ P +RSRTR
Sbjct: 579 ARRGRSRSRTPARRRSRSRTPTRRRSRSR--TPARRGRSRSRTPARRRSRTRSPVRRRSR 636
Query: 148 -----RKSWRKVARTTAGHARTERLSALSRAP-RWARSVCALCSSTSASVCGRCSLEHLR 201
R+S R +RT A R+ SR P R RS + S R R
Sbjct: 637 SRSPARRSGRSRSRTPARRGRSR-----SRTPARRGRSRSRTPARRSGRSRSRTPARRGR 691
Query: 202 GTGRVGRGGRGQRQGHDRNSGSHS 225
R R GR + + R SHS
Sbjct: 692 SRSRTPRRGRSRSRSLVRRGRSHS 715
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 35.8 bits (81), Expect = 0.036
Identities = 49/169 (28%), Positives = 63/169 (37%), Gaps = 32/169 (18%)
Query: 83 GDGDERYILEGCGRARAGVPQTRAPGSPLPLGSVP----DPRCDTASLPSPAGGGRTSCW 138
G DE A +GV + P P P G P R ++S S + RTS
Sbjct: 333 GGSDEEAAAAAAAAAASGVTTGKPPAPPQPGGPAPGRNASARRRSSSSSSSSSASRTSSS 392
Query: 139 APGKRSRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSVCALCSSTSASVCGRCSLE 198
RS +R +R G+ R+ R A SR+ W+RS + + GR
Sbjct: 393 RSSSRSSSR-------SRRGGGYYRSGR-HARSRSRSWSRSRSRSRRYSRSRSRGR---R 441
Query: 199 HLRGTGRVG---------RGGRGQRQGHDRNSGSHSSQDTDTGDNTRVG 238
H G R G RGG G R+ S SHS GD R G
Sbjct: 442 HSGGGSRDGHRYSRSPARRGGYGPRR--RSRSRSHS------GDRYRRG 482
>gi|158854042 hypothetical protein LOC222183 [Homo sapiens]
Length = 653
Score = 35.4 bits (80), Expect = 0.046
Identities = 34/122 (27%), Positives = 47/122 (38%), Gaps = 17/122 (13%)
Query: 106 APGSPLPLGSVPDPRCDTASLPSPAGGGRTSCWAPGKRSRTRRKSWRKVARTTAGHARTE 165
AP P P PR S PS G G + G+R R RR+ R + +A R
Sbjct: 353 APTPPARGKESPSPR----SAPSSQGRGGRAAGGAGRRRRRRRRRRRSRSSASAPRRRGR 408
Query: 166 RLSALSRAPRWARSVCALCSSTSASVCGRCSLEHLRGTGRVGRGGRGQRQGHDRNSGSHS 225
R + +RS+ SS+ + G+GR G G G G +R G H
Sbjct: 409 RRPRPAPPRGSSRSLSRARSSSDS------------GSGR-GAPGPGPEPGSERGHGGHG 455
Query: 226 SQ 227
+
Sbjct: 456 KR 457
>gi|38045906 von Hippel-Lindau tumor suppressor isoform 2 [Homo
sapiens]
Length = 172
Score = 34.3 bits (77), Expect = 0.10
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 45 WSQQEQGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQT 104
W + E GA AGV EE G + GGEE+ A+E+G E G G +
Sbjct: 8 WDEAEVGAEEAGV-------EEYGPEEDGGEESGAEESGP-------EESGPEELGAEEE 53
Query: 105 RAPGSPLPL 113
G P P+
Sbjct: 54 MEAGRPRPV 62
>gi|4507891 von Hippel-Lindau tumor suppressor isoform 1 [Homo
sapiens]
Length = 213
Score = 34.3 bits (77), Expect = 0.10
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 45 WSQQEQGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQT 104
W + E GA AGV EE G + GGEE+ A+E+G E G G +
Sbjct: 8 WDEAEVGAEEAGV-------EEYGPEEDGGEESGAEESGP-------EESGPEELGAEEE 53
Query: 105 RAPGSPLPL 113
G P P+
Sbjct: 54 MEAGRPRPV 62
>gi|19923084 polycystin-1L1 [Homo sapiens]
Length = 2849
Score = 34.3 bits (77), Expect = 0.10
Identities = 35/121 (28%), Positives = 48/121 (39%), Gaps = 17/121 (14%)
Query: 100 GVPQTRAPGSPLPLGSVPD---PRCDTASLPSPAGGGR----------TSCWAPGKR--- 143
G QT AP P G +PD PR AS +G GR T+C AP +
Sbjct: 2034 GGAQTEAPHGPNSWGRIPDAQEPRKQPASAIL-SGSGRAQRKAASDNGTACPAPKLQVHG 2092
Query: 144 SRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSVCALCSSTSASVCGRCSLEHLRGT 203
+ R S + H + P+W+R++ SS ++CG SL GT
Sbjct: 2093 ADHSRTSLMGKSHCCPPHTQAPSSGLEGLMPQWSRALQPWWSSAVWAICGTASLACSLGT 2152
Query: 204 G 204
G
Sbjct: 2153 G 2153
>gi|239746476 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 33.5 bits (75), Expect = 0.18
Identities = 45/158 (28%), Positives = 56/158 (35%), Gaps = 30/158 (18%)
Query: 16 WRTVGCSGSIQASLALEAGVSMLPTFWTAWSQQEQGAAGAGVRVALPQVEELGRHDGGGE 75
WR +GC S A LEA L W + + A V + GGG
Sbjct: 27 WRLLGCIPSPCAGRGLEA----LGRDWRGTVAEPRPEAQGRVPSFRSNARRVRSVRGGGV 82
Query: 76 EAQAQ---EAGDGDERYILEGCGRARAGVPQTRAPGSPLPLGSV--------------PD 118
A A E G G + RA A P++ SP P S+ P
Sbjct: 83 TAPAPPDAEVGSGRPAGL---AARAAAAAPRSLRKPSPSPSPSLRRRRARNSPGIRPSPS 139
Query: 119 PRCDTASLPSPAGGGR-TSCWA-----PGKRSRTRRKS 150
P + PSPA GGR T+C + PG RR S
Sbjct: 140 PSPSPSPSPSPARGGRWTTCASSSPALPGTDGVLRRMS 177
>gi|239752220 PREDICTED: hypothetical protein XP_002348149 [Homo
sapiens]
Length = 305
Score = 33.1 bits (74), Expect = 0.23
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 14/121 (11%)
Query: 42 WTAWSQQEQGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGV 101
W + AG G+ + E L + GGEE + AG G CG R GV
Sbjct: 22 WGHQKADDTRVAGPGLSGGHGEAEVLQQ---GGEEEEELHAGQGLPEACTAACGEGR-GV 77
Query: 102 PQTRAPGS-PLPLGSVPDPRCDTASLPSPAGGGRTSC------WAPGKRSRTRRKSWRKV 154
+ PGS +PL + + S +PA GR + WA K S +RK + +
Sbjct: 78 SE---PGSWVIPLQDSTEGDREPGSPQAPAEKGRKASGFTKWPWASRKCSGWKRKGFSQT 134
Query: 155 A 155
A
Sbjct: 135 A 135
>gi|239743069 PREDICTED: hypothetical protein XP_002342750 [Homo
sapiens]
Length = 231
Score = 33.1 bits (74), Expect = 0.23
Identities = 43/144 (29%), Positives = 53/144 (36%), Gaps = 37/144 (25%)
Query: 93 GCGRARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSPA------GGGRTSC----WAPGK 142
G R A TRA +P S PD + P+PA GGG C WA G+
Sbjct: 43 GLCRTEAAAAATRAGAAPATAES-PDTPEEPPEEPAPAIAPGGSGGGGGGCGAQHWAAGR 101
Query: 143 RSRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSVCALCSSTSASVCGRCSLEHLRG 202
R++ R + GH R AP R R L+ RG
Sbjct: 102 RAQ-REQGAGAAVLADFGHVRA--------APSGLR---------------RRRLQRRRG 137
Query: 203 TGRVGRG-GRGQRQGHDRNSGSHS 225
GR GRG GR ++ G DR S
Sbjct: 138 -GRGGRGAGRARKPGPDRAGAERS 160
>gi|239508715 PREDICTED: hypothetical protein [Homo sapiens]
Length = 231
Score = 33.1 bits (74), Expect = 0.23
Identities = 43/144 (29%), Positives = 53/144 (36%), Gaps = 37/144 (25%)
Query: 93 GCGRARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSPA------GGGRTSC----WAPGK 142
G R A TRA +P S PD + P+PA GGG C WA G+
Sbjct: 43 GLCRTEAAAAATRAGAAPATAES-PDTPEEPPEEPAPAIAPGGSGGGGGGCGAQHWAAGR 101
Query: 143 RSRTRRKSWRKVARTTAGHARTERLSALSRAPRWARSVCALCSSTSASVCGRCSLEHLRG 202
R++ R + GH R AP R R L+ RG
Sbjct: 102 RAQ-REQGAGAAVLADFGHVRA--------APSGLR---------------RRRLQRRRG 137
Query: 203 TGRVGRG-GRGQRQGHDRNSGSHS 225
GR GRG GR ++ G DR S
Sbjct: 138 -GRGGRGAGRARKPGPDRAGAERS 160
>gi|169171347 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1128
Score = 32.7 bits (73), Expect = 0.30
Identities = 52/213 (24%), Positives = 69/213 (32%), Gaps = 31/213 (14%)
Query: 27 ASLALEAGVSMLPTFWTAWSQQEQGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGD 86
A LA G + P +WS+Q G + LP V+ DGGG G+
Sbjct: 380 ARLAESRGRGVTPR--ASWSRQPAGGPLSSEGHLLPLVQR----DGGGLAEHRGREGE-- 431
Query: 87 ERYILEGCGRARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSP--AGGGRTSCWAPGKRS 144
EG G + R GSP G P R AG G S PG
Sbjct: 432 -----EGVRAGGGGTGEVRGGGSP---GRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVER 483
Query: 145 RTRRKSWRKVARTTAGHARTERLSALSRAPRWARSVCALCSSTSASVCGRCSLEHLRGTG 204
R + + R ER+ RA CG + + G G
Sbjct: 484 RVAEGAQQFGPRVGL-RQHAERVERAQRAAEGR-------GGGGGGGCGAQAHRRVVGQG 535
Query: 205 RV-----GRGGRGQRQGHDRNSGSHSSQDTDTG 232
+V G+ RG+R H + G +S G
Sbjct: 536 QVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPG 568
>gi|239753310 PREDICTED: hypothetical protein XP_002345618 [Homo
sapiens]
Length = 415
Score = 32.7 bits (73), Expect = 0.30
Identities = 36/114 (31%), Positives = 44/114 (38%), Gaps = 16/114 (14%)
Query: 88 RYILEGCGRARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSPAGGGRTSCWAPGKRSRTR 147
R + G A G P A GSPLP G+ P R P G G PG S
Sbjct: 56 RKLGSGWNAASGGSPGLEAAGSPLPAGAQPCGR------PRSGGIGDPVLRTPGPLSAQG 109
Query: 148 RKSWRKVARTTAGHARTE---RLSALSR-------APRWARSVCALCSSTSASV 191
R + A G R+E R + L R AP+ +V A CSS S+
Sbjct: 110 RTPAVQDAPRCLGAPRSEHPGRSAPLQRSSSYTLFAPQLPGTVLAPCSSKRLSL 163
>gi|169172209 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 32.7 bits (73), Expect = 0.30
Identities = 52/213 (24%), Positives = 69/213 (32%), Gaps = 31/213 (14%)
Query: 27 ASLALEAGVSMLPTFWTAWSQQEQGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGD 86
A LA G + P +WS+Q G + LP V+ DGGG G+
Sbjct: 53 ARLAESRGRGVTPR--ASWSRQPAGGPLSSEGHLLPLVQR----DGGGLAEHRGREGE-- 104
Query: 87 ERYILEGCGRARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSP--AGGGRTSCWAPGKRS 144
EG G + R GSP G P R AG G S PG
Sbjct: 105 -----EGVRAGGGGTGEVRGGGSP---GRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVER 156
Query: 145 RTRRKSWRKVARTTAGHARTERLSALSRAPRWARSVCALCSSTSASVCGRCSLEHLRGTG 204
R + + R ER+ RA CG + + G G
Sbjct: 157 RVAEGAQQFGPRVGL-RQHAERVERAQRAAEGR-------GGGGGGGCGAQAHRRVVGQG 208
Query: 205 RV-----GRGGRGQRQGHDRNSGSHSSQDTDTG 232
+V G+ RG+R H + G +S G
Sbjct: 209 QVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPG 241
>gi|169170953 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 32.7 bits (73), Expect = 0.30
Identities = 52/213 (24%), Positives = 69/213 (32%), Gaps = 31/213 (14%)
Query: 27 ASLALEAGVSMLPTFWTAWSQQEQGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGD 86
A LA G + P +WS+Q G + LP V+ DGGG G+
Sbjct: 53 ARLAESRGRGVTPR--ASWSRQPAGGPLSSEGHLLPLVQR----DGGGLAEHRGREGE-- 104
Query: 87 ERYILEGCGRARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSP--AGGGRTSCWAPGKRS 144
EG G + R GSP G P R AG G S PG
Sbjct: 105 -----EGVRAGGGGTGEVRGGGSP---GRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVER 156
Query: 145 RTRRKSWRKVARTTAGHARTERLSALSRAPRWARSVCALCSSTSASVCGRCSLEHLRGTG 204
R + + R ER+ RA CG + + G G
Sbjct: 157 RVAEGAQQFGPRVGL-RQHAERVERAQRAAEGR-------GGGGGGGCGAQAHRRVVGQG 208
Query: 205 RV-----GRGGRGQRQGHDRNSGSHSSQDTDTG 232
+V G+ RG+R H + G +S G
Sbjct: 209 QVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPG 241
>gi|239741764 PREDICTED: hypothetical protein XP_002342289 [Homo
sapiens]
Length = 433
Score = 32.7 bits (73), Expect = 0.30
Identities = 36/114 (31%), Positives = 44/114 (38%), Gaps = 16/114 (14%)
Query: 88 RYILEGCGRARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSPAGGGRTSCWAPGKRSRTR 147
R + G A G P A GSPLP G+ P R P G G PG S
Sbjct: 56 RKLGSGWNAASGGSPGLEAAGSPLPAGAQPCGR------PRSGGIGDPVLRTPGPLSAQG 109
Query: 148 RKSWRKVARTTAGHARTE---RLSALSR-------APRWARSVCALCSSTSASV 191
R + A G R+E R + L R AP+ +V A CSS S+
Sbjct: 110 RTPAVQDAPRCLGAPRSEHPGRSAPLQRSSSYTLFAPQLPGTVLAPCSSKRLSL 163
>gi|239508753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 801
Score = 32.7 bits (73), Expect = 0.30
Identities = 52/213 (24%), Positives = 69/213 (32%), Gaps = 31/213 (14%)
Query: 27 ASLALEAGVSMLPTFWTAWSQQEQGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGD 86
A LA G + P +WS+Q G + LP V+ DGGG G+
Sbjct: 53 ARLAESRGRGVTPR--ASWSRQPAGGPLSSEGHLLPLVQR----DGGGLAEHRGREGE-- 104
Query: 87 ERYILEGCGRARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSP--AGGGRTSCWAPGKRS 144
EG G + R GSP G P R AG G S PG
Sbjct: 105 -----EGVRAGGGGTGEVRGGGSP---GRQPVGRAAVTGEAGAGAAGRGAQSVRGPGVER 156
Query: 145 RTRRKSWRKVARTTAGHARTERLSALSRAPRWARSVCALCSSTSASVCGRCSLEHLRGTG 204
R + + R ER+ RA CG + + G G
Sbjct: 157 RVAEGAQQFGPRVGL-RQHAERVERAQRAAEGR-------GGGGGGGCGAQAHRRVVGQG 208
Query: 205 RV-----GRGGRGQRQGHDRNSGSHSSQDTDTG 232
+V G+ RG+R H + G +S G
Sbjct: 209 QVRWEGVGQAARGRRMAHHCSQGRNSQSRHQPG 241
>gi|27777653 sperm acrosome associated 3 [Homo sapiens]
Length = 215
Score = 32.7 bits (73), Expect = 0.30
Identities = 33/107 (30%), Positives = 40/107 (37%), Gaps = 21/107 (19%)
Query: 97 ARAGVPQTRAPGSPLPLGSVPDPR------CDTASLPSPAGGGRTSCWAPGKRSRTRRKS 150
A G P R SP+ SV PR +S S +GGG TS RSR R+
Sbjct: 4 ALRGAPLIRVHSSPVSSPSVSGPRRLVSCLSSQSSALSQSGGGSTSAAGIEARSRALRRR 63
Query: 151 WRKVARTTAGHARTERLSALSRAPRWARSVCALCSSTSASVCGRCSL 197
W AG + LS L S+ A + GRC L
Sbjct: 64 W-----CPAGIMLLALVCLLS----------CLLPSSEAKLYGRCEL 95
>gi|116268127 kinase non-catalytic C-lobe domain (KIND) containing 1
isoform a [Homo sapiens]
Length = 1749
Score = 32.7 bits (73), Expect = 0.30
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 16/74 (21%)
Query: 50 QGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQTRAPGS 109
Q A+ A + AL Q E EE Q G+G+E+ LE A AG P + P
Sbjct: 684 QNASVARDQPALAQEES--------EERGGQREGEGEEKLSLE----AHAGSPSLKTPDG 731
Query: 110 PL----PLGSVPDP 119
P+ P G+ P+P
Sbjct: 732 PVPGPGPQGAAPEP 745
>gi|239757419 PREDICTED: hypothetical protein [Homo sapiens]
Length = 164
Score = 32.3 bits (72), Expect = 0.39
Identities = 31/102 (30%), Positives = 40/102 (39%), Gaps = 17/102 (16%)
Query: 50 QGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQTRAPGS 109
+ A G +R P +G + A++ D + + G GR TR S
Sbjct: 57 RAAQGESLRPPAPASLHVGGPKPAAKSAKSFPRRLRDRKCLGPGGGR-------TRVAAS 109
Query: 110 PLPLGSVPDPRCDTASLPSPAGGGRTSCWAPGKRSRTRRKSW 151
L LGSVP P A LP P S W G+R R R W
Sbjct: 110 ALSLGSVPLP----AFLPRP------SPWQLGRRERGLRAEW 141
>gi|239752303 PREDICTED: hypothetical protein XP_002348193 [Homo
sapiens]
Length = 258
Score = 32.3 bits (72), Expect = 0.39
Identities = 40/161 (24%), Positives = 56/161 (34%), Gaps = 25/161 (15%)
Query: 18 TVGCSGSIQASLALEAGVSMLPTFWTAWSQQEQGAAGAGVRVALPQVEELGRHDGGGEEA 77
T+ C AS ++ + S + +A + +E+ A A R P GGG
Sbjct: 41 TLSCRWLSSASFSVAS--SSMALLSSAAAPEEEAEAAAATRSPQPSSSGSSSSRGGGAPV 98
Query: 78 QAQEAGDGDERYILEGCGRARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSPAGGGRTSC 137
E G + +PGS +P P P D PS AG G T+
Sbjct: 99 ARPEPG-------------------RAASPGSMVPGPPAPPPSGDQQPAPS-AGSGSTAD 138
Query: 138 ---WAPGKRSRTRRKSWRKVARTTAGHARTERLSALSRAPR 175
W + R AR AG R + + S APR
Sbjct: 139 LPEWPWPLQLLLLLAPGRGCARGRAGEGRAQCAGSPSTAPR 179
>gi|239751936 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 32.3 bits (72), Expect = 0.39
Identities = 31/102 (30%), Positives = 40/102 (39%), Gaps = 17/102 (16%)
Query: 50 QGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGVPQTRAPGS 109
+ A G +R P +G + A++ D + + G GR TR S
Sbjct: 90 RAAQGESLRPPAPASLHVGGPKPAAKSAKSFPRRLRDRKCLGPGGGR-------TRVAAS 142
Query: 110 PLPLGSVPDPRCDTASLPSPAGGGRTSCWAPGKRSRTRRKSW 151
L LGSVP P A LP P S W G+R R R W
Sbjct: 143 ALSLGSVPLP----AFLPRP------SPWQLGRRERGLRAEW 174
>gi|239746814 PREDICTED: hypothetical protein XP_002343855 [Homo
sapiens]
Length = 258
Score = 32.3 bits (72), Expect = 0.39
Identities = 40/161 (24%), Positives = 56/161 (34%), Gaps = 25/161 (15%)
Query: 18 TVGCSGSIQASLALEAGVSMLPTFWTAWSQQEQGAAGAGVRVALPQVEELGRHDGGGEEA 77
T+ C AS ++ + S + +A + +E+ A A R P GGG
Sbjct: 41 TLSCRWLSSASFSVAS--SSMALLSSAAAPEEEAEAAAATRSPQPSSSGSSSSRGGGAPV 98
Query: 78 QAQEAGDGDERYILEGCGRARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSPAGGGRTSC 137
E G + +PGS +P P P D PS AG G T+
Sbjct: 99 ARPEPG-------------------RAASPGSMVPGPPAPPPSGDQQPAPS-AGSGSTAD 138
Query: 138 ---WAPGKRSRTRRKSWRKVARTTAGHARTERLSALSRAPR 175
W + R AR AG R + + S APR
Sbjct: 139 LPEWPWPLQLLLLLAPGRGCARGRAGEGRAQCAGSPSTAPR 179
>gi|239746741 PREDICTED: hypothetical protein XP_002343822 [Homo
sapiens]
Length = 306
Score = 32.3 bits (72), Expect = 0.39
Identities = 35/121 (28%), Positives = 49/121 (40%), Gaps = 14/121 (11%)
Query: 42 WTAWSQQEQGAAGAGVRVALPQVEELGRHDGGGEEAQAQEAGDGDERYILEGCGRARAGV 101
W + AG G+ + E L + GGEE + AG G CG R GV
Sbjct: 22 WGHQKADDTRVAGPGLSGGHGEAEVLQQ---GGEEEEELHAGQGLPEACTAACGEGR-GV 77
Query: 102 PQTRAPGS-PLPLGSVPDPRCDTASLPSPAGGGRTSC------WAPGKRSRTRRKSWRKV 154
+ PGS +PL + + S +PA GR + WA K S +RK + +
Sbjct: 78 SE---PGSWVIPLQDSTEGDREPGSPQAPAEKGRKASGFTKWPWASRKCSGWKRKGFFQT 134
Query: 155 A 155
A
Sbjct: 135 A 135
>gi|195947369 junction-mediating and regulatory protein [Homo
sapiens]
Length = 988
Score = 32.3 bits (72), Expect = 0.39
Identities = 23/72 (31%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 77 AQAQEAGDGDERYILEGCGRARAGVPQTRAPGSPLPLGSVPDPRCDTASLPSPAGGGRTS 136
AQ Q +G ++ G A +R PGSP G P+ + SP G R+S
Sbjct: 51 AQRQRSGSREQAGARGGAEAGGAASDGSRGPGSPAGRGR-PEATASATLVRSP-GPRRSS 108
Query: 137 CWAPGKRSRTRR 148
WA G R+ R
Sbjct: 109 AWAEGGSPRSTR 120
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.314 0.128 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,220,831
Number of Sequences: 37866
Number of extensions: 635457
Number of successful extensions: 3492
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 174
Number of HSP's that attempted gapping in prelim test: 3320
Number of HSP's gapped (non-prelim): 352
length of query: 248
length of database: 18,247,518
effective HSP length: 100
effective length of query: 148
effective length of database: 14,460,918
effective search space: 2140215864
effective search space used: 2140215864
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.