Search of human proteins with 239743009

Search of human proteins with 239743009

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239743009 PREDICTED: hypothetical protein XP_002342695 [Homo
sapiens]
         (295 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754376 PREDICTED: similar to putative p150 [Homo sapiens]       634   0.0  
gi|239748989 PREDICTED: hypothetical protein XP_002346845 [Homo ...   634   0.0  
gi|239743009 PREDICTED: hypothetical protein XP_002342695 [Homo ...   634   0.0  
gi|239754856 PREDICTED: p150-like [Homo sapiens]                      400   e-112
gi|239743530 PREDICTED: p150-like [Homo sapiens]                      400   e-112
gi|239749395 PREDICTED: p150-like [Homo sapiens]                      398   e-111
gi|239754371 PREDICTED: hypothetical protein [Homo sapiens]           326   1e-89
gi|239748922 PREDICTED: hypothetical protein [Homo sapiens]           326   1e-89
gi|239742944 PREDICTED: hypothetical protein [Homo sapiens]           326   1e-89
gi|239754279 PREDICTED: hypothetical protein XP_002345940 [Homo ...   250   1e-66
gi|239748812 PREDICTED: hypothetical protein XP_002346807 [Homo ...   250   1e-66
gi|239740912 PREDICTED: hypothetical protein XP_002344084 [Homo ...   250   1e-66
gi|239740849 PREDICTED: hypothetical protein XP_002344051 [Homo ...   250   1e-66
gi|239752486 PREDICTED: hypothetical protein XP_002347335 [Homo ...   183   2e-46
gi|239756280 PREDICTED: hypothetical protein XP_002344872 [Homo ...   142   3e-34
gi|239750807 PREDICTED: hypothetical protein XP_002347566 [Homo ...   142   3e-34
gi|239745167 PREDICTED: hypothetical protein XP_002343386 [Homo ...   142   3e-34
gi|148491080 trinucleotide repeat containing 6B isoform 2 [Homo ...    31   1.1  
gi|241982729 trinucleotide repeat containing 6B isoform 1 [Homo ...    31   1.1  
gi|38570064 hypothetical protein LOC136895 [Homo sapiens]              31   1.1  
gi|154813197 talpid3 protein [Homo sapiens]                            30   2.5  
gi|122937227 U2-associated SR140 protein [Homo sapiens]                30   3.3  
gi|21717832 sperm equatorial segment protein 1 [Homo sapiens]          29   4.3  
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]          29   4.3  
gi|20806097 nucleolar complex associated 3 homolog [Homo sapiens]      29   4.3  
gi|148539876 beta-adrenergic receptor kinase 1 [Homo sapiens]          29   5.6  
gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens]             29   5.6  
gi|195976821 dysferlin isoform 2 [Homo sapiens]                        28   7.4  
gi|4503431 dysferlin isoform 8 [Homo sapiens]                          28   7.4  
gi|195976779 dysferlin isoform 1 [Homo sapiens]                        28   7.4  

>gi|239754376 PREDICTED: similar to putative p150 [Homo sapiens]
          Length = 295

 Score =  634 bits (1635), Expect = 0.0
 Identities = 295/295 (100%), Positives = 295/295 (100%)

Query: 1   MLPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDS 60
           MLPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDS
Sbjct: 1   MLPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDS 60

Query: 61  LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGM 120
           LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGM
Sbjct: 61  LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGM 120

Query: 121 GKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLI 180
           GKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLI
Sbjct: 121 GKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLI 180

Query: 181 SRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTM 240
           SRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTM
Sbjct: 181 SRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTM 240

Query: 241 RYHLTPVRMAVIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWRFLRDLE 295
           RYHLTPVRMAVIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWRFLRDLE
Sbjct: 241 RYHLTPVRMAVIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWRFLRDLE 295


>gi|239748989 PREDICTED: hypothetical protein XP_002346845 [Homo
           sapiens]
          Length = 295

 Score =  634 bits (1635), Expect = 0.0
 Identities = 295/295 (100%), Positives = 295/295 (100%)

Query: 1   MLPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDS 60
           MLPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDS
Sbjct: 1   MLPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDS 60

Query: 61  LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGM 120
           LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGM
Sbjct: 61  LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGM 120

Query: 121 GKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLI 180
           GKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLI
Sbjct: 121 GKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLI 180

Query: 181 SRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTM 240
           SRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTM
Sbjct: 181 SRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTM 240

Query: 241 RYHLTPVRMAVIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWRFLRDLE 295
           RYHLTPVRMAVIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWRFLRDLE
Sbjct: 241 RYHLTPVRMAVIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWRFLRDLE 295


>gi|239743009 PREDICTED: hypothetical protein XP_002342695 [Homo
           sapiens]
          Length = 295

 Score =  634 bits (1635), Expect = 0.0
 Identities = 295/295 (100%), Positives = 295/295 (100%)

Query: 1   MLPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDS 60
           MLPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDS
Sbjct: 1   MLPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDS 60

Query: 61  LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGM 120
           LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGM
Sbjct: 61  LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGM 120

Query: 121 GKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLI 180
           GKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLI
Sbjct: 121 GKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLI 180

Query: 181 SRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTM 240
           SRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTM
Sbjct: 181 SRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTM 240

Query: 241 RYHLTPVRMAVIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWRFLRDLE 295
           RYHLTPVRMAVIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWRFLRDLE
Sbjct: 241 RYHLTPVRMAVIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWRFLRDLE 295


>gi|239754856 PREDICTED: p150-like [Homo sapiens]
          Length = 262

 Score =  400 bits (1029), Expect = e-112
 Identities = 188/194 (96%), Positives = 190/194 (97%)

Query: 2   LPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 61
           LPDFKLYYKATVTKTAWY YQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL
Sbjct: 60  LPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 119

Query: 62  FNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGMG 121
           FNKWCWENWLA CRKLKLDPFLTPYTKINSRWIK LNVRPKTIKT+EENLGIT+QDIGMG
Sbjct: 120 FNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMG 179

Query: 122 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 181
           KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS
Sbjct: 180 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 239

Query: 182 RIYNEFKQIYKKKT 195
           RIYNE KQIYKKKT
Sbjct: 240 RIYNELKQIYKKKT 253


>gi|239743530 PREDICTED: p150-like [Homo sapiens]
          Length = 262

 Score =  400 bits (1029), Expect = e-112
 Identities = 188/194 (96%), Positives = 190/194 (97%)

Query: 2   LPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 61
           LPDFKLYYKATVTKTAWY YQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL
Sbjct: 60  LPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 119

Query: 62  FNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGMG 121
           FNKWCWENWLA CRKLKLDPFLTPYTKINSRWIK LNVRPKTIKT+EENLGIT+QDIGMG
Sbjct: 120 FNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMG 179

Query: 122 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 181
           KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS
Sbjct: 180 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 239

Query: 182 RIYNEFKQIYKKKT 195
           RIYNE KQIYKKKT
Sbjct: 240 RIYNELKQIYKKKT 253


>gi|239749395 PREDICTED: p150-like [Homo sapiens]
          Length = 262

 Score =  398 bits (1023), Expect = e-111
 Identities = 187/194 (96%), Positives = 189/194 (97%)

Query: 2   LPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 61
           LPDFKLYYKATVTKTAWY YQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL
Sbjct: 60  LPDFKLYYKATVTKTAWYWYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 119

Query: 62  FNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGMG 121
           FNKWCWENWLA CRKLKLDPFLTPYTKINSRWIK LNVRPKTIKT+EENLGIT+QDIGMG
Sbjct: 120 FNKWCWENWLATCRKLKLDPFLTPYTKINSRWIKDLNVRPKTIKTLEENLGITLQDIGMG 179

Query: 122 KDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 181
           KDFMSKTPKAMATKAKIDKWD IKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS
Sbjct: 180 KDFMSKTPKAMATKAKIDKWDQIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLIS 239

Query: 182 RIYNEFKQIYKKKT 195
           RIYNE KQIYKKKT
Sbjct: 240 RIYNELKQIYKKKT 253


>gi|239754371 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score =  326 bits (836), Expect = 1e-89
 Identities = 154/183 (84%), Positives = 166/183 (90%)

Query: 1   MLPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDS 60
           MLPDFKL+YKATVTKTAWY YQNR IDQW+RTE SEI  H+YN+LIFDKP+KNK+WGKD 
Sbjct: 42  MLPDFKLHYKATVTKTAWYWYQNRHIDQWSRTETSEIKQHVYNHLIFDKPDKNKKWGKDL 101

Query: 61  LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGM 120
           LF+KWCWENWLAICRKLKLDPFLTPY KINSRWIK LNV+ KTIK +EENLG TIQDIGM
Sbjct: 102 LFSKWCWENWLAICRKLKLDPFLTPYMKINSRWIKDLNVKLKTIKILEENLGNTIQDIGM 161

Query: 121 GKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLI 180
           GKDFM KTPKA+ATKAKIDKWDLIKLKSF TAKE  IRVNRQPT+W+KIFA Y SDKGLI
Sbjct: 162 GKDFMMKTPKAIATKAKIDKWDLIKLKSFFTAKEIIIRVNRQPTEWKKIFAIYPSDKGLI 221

Query: 181 SRI 183
           SRI
Sbjct: 222 SRI 224


>gi|239748922 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score =  326 bits (836), Expect = 1e-89
 Identities = 154/183 (84%), Positives = 166/183 (90%)

Query: 1   MLPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDS 60
           MLPDFKL+YKATVTKTAWY YQNR IDQW+RTE SEI  H+YN+LIFDKP+KNK+WGKD 
Sbjct: 42  MLPDFKLHYKATVTKTAWYWYQNRHIDQWSRTETSEIKQHVYNHLIFDKPDKNKKWGKDL 101

Query: 61  LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGM 120
           LF+KWCWENWLAICRKLKLDPFLTPY KINSRWIK LNV+ KTIK +EENLG TIQDIGM
Sbjct: 102 LFSKWCWENWLAICRKLKLDPFLTPYMKINSRWIKDLNVKLKTIKILEENLGNTIQDIGM 161

Query: 121 GKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLI 180
           GKDFM KTPKA+ATKAKIDKWDLIKLKSF TAKE  IRVNRQPT+W+KIFA Y SDKGLI
Sbjct: 162 GKDFMMKTPKAIATKAKIDKWDLIKLKSFFTAKEIIIRVNRQPTEWKKIFAIYPSDKGLI 221

Query: 181 SRI 183
           SRI
Sbjct: 222 SRI 224


>gi|239742944 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 224

 Score =  326 bits (836), Expect = 1e-89
 Identities = 154/183 (84%), Positives = 166/183 (90%)

Query: 1   MLPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDS 60
           MLPDFKL+YKATVTKTAWY YQNR IDQW+RTE SEI  H+YN+LIFDKP+KNK+WGKD 
Sbjct: 42  MLPDFKLHYKATVTKTAWYWYQNRHIDQWSRTETSEIKQHVYNHLIFDKPDKNKKWGKDL 101

Query: 61  LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGM 120
           LF+KWCWENWLAICRKLKLDPFLTPY KINSRWIK LNV+ KTIK +EENLG TIQDIGM
Sbjct: 102 LFSKWCWENWLAICRKLKLDPFLTPYMKINSRWIKDLNVKLKTIKILEENLGNTIQDIGM 161

Query: 121 GKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLI 180
           GKDFM KTPKA+ATKAKIDKWDLIKLKSF TAKE  IRVNRQPT+W+KIFA Y SDKGLI
Sbjct: 162 GKDFMMKTPKAIATKAKIDKWDLIKLKSFFTAKEIIIRVNRQPTEWKKIFAIYPSDKGLI 221

Query: 181 SRI 183
           SRI
Sbjct: 222 SRI 224


>gi|239754279 PREDICTED: hypothetical protein XP_002345940 [Homo
           sapiens]
          Length = 240

 Score =  250 bits (638), Expect = 1e-66
 Identities = 114/126 (90%), Positives = 117/126 (92%)

Query: 170 FATYSSDKGLISRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSL 229
           F  YSSDKGLISRIYNE KQIYKKKTNNPI KWAKDMNRHFSKEDIY AK+HMKKCS SL
Sbjct: 5   FCIYSSDKGLISRIYNELKQIYKKKTNNPINKWAKDMNRHFSKEDIYTAKRHMKKCSSSL 64

Query: 230 AIREMQIKTTMRYHLTPVRMAVIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWR 289
           AI EMQIKTTMR+HLT VRMA+IKKSGNNRCWRGCGEIGTLLHCWWDCKL QPLWKSVWR
Sbjct: 65  AIGEMQIKTTMRFHLTLVRMAIIKKSGNNRCWRGCGEIGTLLHCWWDCKLAQPLWKSVWR 124

Query: 290 FLRDLE 295
           FLRDLE
Sbjct: 125 FLRDLE 130


>gi|239748812 PREDICTED: hypothetical protein XP_002346807 [Homo
           sapiens]
          Length = 240

 Score =  250 bits (638), Expect = 1e-66
 Identities = 114/126 (90%), Positives = 117/126 (92%)

Query: 170 FATYSSDKGLISRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSL 229
           F  YSSDKGLISRIYNE KQIYKKKTNNPI KWAKDMNRHFSKEDIY AK+HMKKCS SL
Sbjct: 5   FCIYSSDKGLISRIYNELKQIYKKKTNNPINKWAKDMNRHFSKEDIYTAKRHMKKCSSSL 64

Query: 230 AIREMQIKTTMRYHLTPVRMAVIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWR 289
           AI EMQIKTTMR+HLT VRMA+IKKSGNNRCWRGCGEIGTLLHCWWDCKL QPLWKSVWR
Sbjct: 65  AIGEMQIKTTMRFHLTLVRMAIIKKSGNNRCWRGCGEIGTLLHCWWDCKLAQPLWKSVWR 124

Query: 290 FLRDLE 295
           FLRDLE
Sbjct: 125 FLRDLE 130


>gi|239740912 PREDICTED: hypothetical protein XP_002344084 [Homo
           sapiens]
          Length = 240

 Score =  250 bits (638), Expect = 1e-66
 Identities = 114/126 (90%), Positives = 117/126 (92%)

Query: 170 FATYSSDKGLISRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSL 229
           F  YSSDKGLISRIYNE KQIYKKKTNNPI KWAKDMNRHFSKEDIY AK+HMKKCS SL
Sbjct: 5   FCIYSSDKGLISRIYNELKQIYKKKTNNPINKWAKDMNRHFSKEDIYTAKRHMKKCSSSL 64

Query: 230 AIREMQIKTTMRYHLTPVRMAVIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWR 289
           AI EMQIKTTMR+HLT VRMA+IKKSGNNRCWRGCGEIGTLLHCWWDCKL QPLWKSVWR
Sbjct: 65  AIGEMQIKTTMRFHLTLVRMAIIKKSGNNRCWRGCGEIGTLLHCWWDCKLAQPLWKSVWR 124

Query: 290 FLRDLE 295
           FLRDLE
Sbjct: 125 FLRDLE 130


>gi|239740849 PREDICTED: hypothetical protein XP_002344051 [Homo
           sapiens]
          Length = 240

 Score =  250 bits (638), Expect = 1e-66
 Identities = 114/126 (90%), Positives = 117/126 (92%)

Query: 170 FATYSSDKGLISRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSL 229
           F  YSSDKGLISRIYNE KQIYKKKTNNPI KWAKDMNRHFSKEDIY AK+HMKKCS SL
Sbjct: 5   FCIYSSDKGLISRIYNELKQIYKKKTNNPINKWAKDMNRHFSKEDIYTAKRHMKKCSSSL 64

Query: 230 AIREMQIKTTMRYHLTPVRMAVIKKSGNNRCWRGCGEIGTLLHCWWDCKLVQPLWKSVWR 289
           AI EMQIKTTMR+HLT VRMA+IKKSGNNRCWRGCGEIGTLLHCWWDCKL QPLWKSVWR
Sbjct: 65  AIGEMQIKTTMRFHLTLVRMAIIKKSGNNRCWRGCGEIGTLLHCWWDCKLAQPLWKSVWR 124

Query: 290 FLRDLE 295
           FLRDLE
Sbjct: 125 FLRDLE 130


>gi|239752486 PREDICTED: hypothetical protein XP_002347335 [Homo
           sapiens]
          Length = 137

 Score =  183 bits (464), Expect = 2e-46
 Identities = 91/141 (64%), Positives = 113/141 (80%), Gaps = 4/141 (2%)

Query: 120 MGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGL 179
           MG+DF+++TPKAMAT+ KI KWDL KLKS C+AK+T IRVNRQPT+WE I A Y SDKGL
Sbjct: 1   MGRDFITRTPKAMATETKIYKWDLTKLKSICSAKDTIIRVNRQPTEWENIVAIYPSDKGL 60

Query: 180 ISRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTT 239
           I RIY E  QIYKKK N+  +K +K   +  +KEDIY A +H+K+ + SL IREM+IKTT
Sbjct: 61  ICRIYKE--QIYKKKKNH--QKVSKGYEQTLTKEDIYRANEHVKQSTSSLVIREMEIKTT 116

Query: 240 MRYHLTPVRMAVIKKSGNNRC 260
           MRY+LTP+RMA++KKSG NRC
Sbjct: 117 MRYNLTPLRMAIVKKSGKNRC 137


>gi|239756280 PREDICTED: hypothetical protein XP_002344872 [Homo
           sapiens]
          Length = 283

 Score =  142 bits (358), Expect = 3e-34
 Identities = 61/67 (91%), Positives = 64/67 (95%)

Query: 2   LPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 61
           LPDFKLYYKATVTKT+WY YQNRDIDQWNRTEPSEI PHIYNYLIFDKP+KNKQWGKDSL
Sbjct: 215 LPDFKLYYKATVTKTSWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKQWGKDSL 274

Query: 62  FNKWCWE 68
           FNKW W+
Sbjct: 275 FNKWWWK 281


>gi|239750807 PREDICTED: hypothetical protein XP_002347566 [Homo
           sapiens]
          Length = 283

 Score =  142 bits (358), Expect = 3e-34
 Identities = 61/67 (91%), Positives = 64/67 (95%)

Query: 2   LPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 61
           LPDFKLYYKATVTKT+WY YQNRDIDQWNRTEPSEI PHIYNYLIFDKP+KNKQWGKDSL
Sbjct: 215 LPDFKLYYKATVTKTSWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKQWGKDSL 274

Query: 62  FNKWCWE 68
           FNKW W+
Sbjct: 275 FNKWWWK 281


>gi|239745167 PREDICTED: hypothetical protein XP_002343386 [Homo
           sapiens]
          Length = 283

 Score =  142 bits (358), Expect = 3e-34
 Identities = 61/67 (91%), Positives = 64/67 (95%)

Query: 2   LPDFKLYYKATVTKTAWYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWGKDSL 61
           LPDFKLYYKATVTKT+WY YQNRDIDQWNRTEPSEI PHIYNYLIFDKP+KNKQWGKDSL
Sbjct: 215 LPDFKLYYKATVTKTSWYWYQNRDIDQWNRTEPSEIMPHIYNYLIFDKPDKNKQWGKDSL 274

Query: 62  FNKWCWE 68
           FNKW W+
Sbjct: 275 FNKWWWK 281


>gi|148491080 trinucleotide repeat containing 6B isoform 2 [Homo
           sapiens]
          Length = 1723

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%)

Query: 18  WYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWG 57
           W  Y+N +   W    P E TP  +N    + P K++ WG
Sbjct: 698 WNDYKNNNSSNWGGGRPDEKTPSSWN----ENPSKDQGWG 733


>gi|241982729 trinucleotide repeat containing 6B isoform 1 [Homo
           sapiens]
          Length = 1833

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 4/40 (10%)

Query: 18  WYRYQNRDIDQWNRTEPSEITPHIYNYLIFDKPEKNKQWG 57
           W  Y+N +   W    P E TP  +N    + P K++ WG
Sbjct: 698 WNDYKNNNSSNWGGGRPDEKTPSSWN----ENPSKDQGWG 733


>gi|38570064 hypothetical protein LOC136895 [Homo sapiens]
          Length = 590

 Score = 31.2 bits (69), Expect = 1.1
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 5/43 (11%)

Query: 124 FMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKW 166
           F  K PK  A    ++ WD I     C+AKE  I+ N + + W
Sbjct: 240 FYPKPPKTFAPNTSLNSWDPI-----CSAKEANIQRNLERSHW 277


>gi|154813197 talpid3 protein [Homo sapiens]
          Length = 1472

 Score = 30.0 bits (66), Expect = 2.5
 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 85  PYTKINSRWIKYLNVRPKTIKTVEENLGITIQDIGMGKDFMSKTPKAMATKAK 137
           PY + NS   K    RPK I+ V+   G  ++ I    DF +  PK M +K K
Sbjct: 587 PYLRFNSPSPKSRPQRPKVIERVK---GTKVKSIRTQTDFYATKPKKMDSKMK 636


>gi|122937227 U2-associated SR140 protein [Homo sapiens]
          Length = 1029

 Score = 29.6 bits (65), Expect = 3.3
 Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 2/109 (1%)

Query: 145 KLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGLISRIYNEFKQIYKKKTNNPIKKWAK 204
           KLK+F   K +T +  R  +K E+       D+   + IY EF   ++    N +K + +
Sbjct: 80  KLKAFSIGKMSTAK--RTLSKKEQEELKKKEDEKAAAEIYEEFLAAFEGSDGNKVKTFVR 137

Query: 205 DMNRHFSKEDIYAAKKHMKKCSPSLAIREMQIKTTMRYHLTPVRMAVIK 253
               + +KE+    +K  K   PS    + +       +  P  + VI+
Sbjct: 138 GGVVNAAKEEHETDEKRGKIYKPSSRFADQKNPPNQSSNERPPSLLVIE 186


>gi|21717832 sperm equatorial segment protein 1 [Homo sapiens]
          Length = 350

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 212 KEDIYAAKKHMKKCSPSLAIREMQIKTTMRYHLTPV 247
           +EDI A+K H+K+     A  E ++KT  +  L PV
Sbjct: 251 REDIEASKDHLKRSLALAAAAEHKLKTMYKSQLLPV 286


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 24/94 (25%), Positives = 42/94 (44%), Gaps = 21/94 (22%)

Query: 120 MGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEKIFATYSSDKGL 179
           +G DF  KT +    K ++  WD    + F +                   A Y S KG+
Sbjct: 75  VGVDFKIKTVELRGKKIRLQIWDTAGQERFNSITS----------------AYYRSAKGI 118

Query: 180 ISRIYNEFKQIYKKKTNNPIKKWAKDMNRHFSKE 213
           I  +Y+    I KK+T + + KW K ++++ S++
Sbjct: 119 IL-VYD----ITKKETFDDLPKWMKMIDKYASED 147


>gi|20806097 nucleolar complex associated 3 homolog [Homo sapiens]
          Length = 800

 Score = 29.3 bits (64), Expect = 4.3
 Identities = 29/110 (26%), Positives = 48/110 (43%), Gaps = 21/110 (19%)

Query: 61  LFNKWCWENWLAICRKLKLDPFLTPYTKINSRWIKYLN--VRPKTIKTVEENLGITIQDI 118
           L ++ C E    + ++ KL        K+ S ++K  N  VRP+ +KT    L + I+++
Sbjct: 376 LISEMCCEAVKKLFKQDKLGQASLGVIKVISGFVKGRNYEVRPEMLKTF---LCLRIKEV 432

Query: 119 GMGKDFMSKTPKAMATKAKIDKWDLIKLKSFCTAKETTIRVNRQPTKWEK 168
                           + K D  D+ K K F T KE    ++R   KW+K
Sbjct: 433 ----------------EVKKDTEDINKPKKFMTFKEKRKSLSRMQRKWKK 466


>gi|148539876 beta-adrenergic receptor kinase 1 [Homo sapiens]
          Length = 689

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 13/43 (30%), Positives = 27/43 (62%), Gaps = 1/43 (2%)

Query: 89  INSRWIKYLNVRPKTIKTVEENLGITIQDIGMGKDFMSKTPKA 131
           +++R++ Y +++P  I  ++E+  + I D+G+  DF  K P A
Sbjct: 308 MHNRFVVYRDLKPANI-LLDEHGHVRISDLGLACDFSKKKPHA 349


>gi|19115954 dynein, axonemal, heavy chain 5 [Homo sapiens]
          Length = 4624

 Score = 28.9 bits (63), Expect = 5.6
 Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)

Query: 68   ENWLAICRKLKLDPFLTPYTKINSRWIKYLNVRPKTIKT--VEENLGITIQDIGMGKDFM 125
            E+ L +   L  + +  P+     +W++YL+     I++    +NL I ++ + +G D  
Sbjct: 1586 EDSLMLLGSLLSNRYNMPFKAQIQKWVQYLSNSTDIIESWMTVQNLWIYLEAVFVGGDIA 1645

Query: 126  SKTPKAMATKAKIDK 140
             + PK     + IDK
Sbjct: 1646 KQLPKEAKRFSNIDK 1660


>gi|195976821 dysferlin isoform 2 [Homo sapiens]
          Length = 2081

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 227 PSLAIREMQIKTTMRYHLTPVRMAVIKKSGNNRCWRGCGEIGTL 270
           P + I  +Q    + Y   P    +  + G N C + CG++ T+
Sbjct: 792 PDIVIWMLQGDKRVAYQRVPAHQVLFSRRGANYCGKNCGKLQTI 835


>gi|4503431 dysferlin isoform 8 [Homo sapiens]
          Length = 2080

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 227 PSLAIREMQIKTTMRYHLTPVRMAVIKKSGNNRCWRGCGEIGTL 270
           P + I  +Q    + Y   P    +  + G N C + CG++ T+
Sbjct: 791 PDIVIWMLQGDKRVAYQRVPAHQVLFSRRGANYCGKNCGKLQTI 834


>gi|195976779 dysferlin isoform 1 [Homo sapiens]
          Length = 2119

 Score = 28.5 bits (62), Expect = 7.4
 Identities = 11/44 (25%), Positives = 20/44 (45%)

Query: 227 PSLAIREMQIKTTMRYHLTPVRMAVIKKSGNNRCWRGCGEIGTL 270
           P + I  +Q    + Y   P    +  + G N C + CG++ T+
Sbjct: 809 PDIVIWMLQGDKRVAYQRVPAHQVLFSRRGANYCGKNCGKLQTI 852


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.135    0.448 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,643,965
Number of Sequences: 37866
Number of extensions: 498022
Number of successful extensions: 1141
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 1105
Number of HSP's gapped (non-prelim): 47
length of query: 295
length of database: 18,247,518
effective HSP length: 102
effective length of query: 193
effective length of database: 14,385,186
effective search space: 2776340898
effective search space used: 2776340898
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.