Guide to the Human Genome
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Search of human proteins with 239742699

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239742699 PREDICTED: hypothetical protein XP_002342611 [Homo
sapiens]
         (169 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239754158 PREDICTED: hypothetical protein XP_002345896 [Homo ...   340   3e-94
gi|239748676 PREDICTED: hypothetical protein XP_002346762 [Homo ...   340   3e-94
gi|239742699 PREDICTED: hypothetical protein XP_002342611 [Homo ...   340   3e-94
gi|168229156 NFKB activating protein [Homo sapiens]                    34   0.068
gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens]         32   0.26 
gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]           32   0.26 
gi|116256363 transmembrane protease, serine 13 [Homo sapiens]          32   0.34 
gi|157502169 astacin-like metalloendopeptidase [Homo sapiens]          30   0.76 
gi|239756545 PREDICTED: hypothetical protein XP_002344931 [Homo ...    30   1.3  
gi|239745511 PREDICTED: hypothetical protein XP_002343508 [Homo ...    30   1.3  
gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]              29   1.7  
gi|239753698 PREDICTED: hypothetical protein [Homo sapiens]            29   1.7  
gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]         29   1.7  
gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]            29   1.7  
gi|50083281 KIAA1853 protein [Homo sapiens]                            29   1.7  
gi|20336330 BCL2-like 12 isoform 1 [Homo sapiens]                      29   2.2  
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        29   2.2  
gi|33286436 gametogenetin [Homo sapiens]                               29   2.2  
gi|239757601 PREDICTED: hypothetical protein [Homo sapiens]            28   2.9  
gi|239752103 PREDICTED: hypothetical protein XP_002348112 [Homo ...    28   2.9  
gi|239746607 PREDICTED: hypothetical protein XP_002343798 [Homo ...    28   2.9  
gi|130978956 adrenocortical dysplasia homolog isoform 1 [Homo sa...    28   2.9  
gi|130979214 adrenocortical dysplasia homolog isoform 3 [Homo sa...    28   3.8  
gi|130978962 adrenocortical dysplasia homolog isoform 2 [Homo sa...    28   3.8  
gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens]    28   3.8  
gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens]    28   3.8  
gi|150170653 EF-hand calcium binding domain 4A [Homo sapiens]          28   3.8  
gi|167234422 hematopoietic cell-specific Lyn substrate 1 [Homo s...    28   3.8  
gi|41352712 inhibitor of nuclear factor kappa B kinase beta subu...    28   4.9  
gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]      28   4.9  

>gi|239754158 PREDICTED: hypothetical protein XP_002345896 [Homo
           sapiens]
          Length = 169

 Score =  340 bits (872), Expect = 3e-94
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MHLGALGFTVARSELWLRSRLWGCTPAAASAAHTPVGVSIPVLRSARFWMAGNLWGQRAA 60
           MHLGALGFTVARSELWLRSRLWGCTPAAASAAHTPVGVSIPVLRSARFWMAGNLWGQRAA
Sbjct: 1   MHLGALGFTVARSELWLRSRLWGCTPAAASAAHTPVGVSIPVLRSARFWMAGNLWGQRAA 60

Query: 61  ISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQERPVAH 120
           ISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQERPVAH
Sbjct: 61  ISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQERPVAH 120

Query: 121 DTLRRRKLESASPVASRGSGGMVPVIFRSSSVSSLRREYASTRRAPTSS 169
           DTLRRRKLESASPVASRGSGGMVPVIFRSSSVSSLRREYASTRRAPTSS
Sbjct: 121 DTLRRRKLESASPVASRGSGGMVPVIFRSSSVSSLRREYASTRRAPTSS 169


>gi|239748676 PREDICTED: hypothetical protein XP_002346762 [Homo
           sapiens]
          Length = 169

 Score =  340 bits (872), Expect = 3e-94
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MHLGALGFTVARSELWLRSRLWGCTPAAASAAHTPVGVSIPVLRSARFWMAGNLWGQRAA 60
           MHLGALGFTVARSELWLRSRLWGCTPAAASAAHTPVGVSIPVLRSARFWMAGNLWGQRAA
Sbjct: 1   MHLGALGFTVARSELWLRSRLWGCTPAAASAAHTPVGVSIPVLRSARFWMAGNLWGQRAA 60

Query: 61  ISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQERPVAH 120
           ISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQERPVAH
Sbjct: 61  ISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQERPVAH 120

Query: 121 DTLRRRKLESASPVASRGSGGMVPVIFRSSSVSSLRREYASTRRAPTSS 169
           DTLRRRKLESASPVASRGSGGMVPVIFRSSSVSSLRREYASTRRAPTSS
Sbjct: 121 DTLRRRKLESASPVASRGSGGMVPVIFRSSSVSSLRREYASTRRAPTSS 169


>gi|239742699 PREDICTED: hypothetical protein XP_002342611 [Homo
           sapiens]
          Length = 169

 Score =  340 bits (872), Expect = 3e-94
 Identities = 169/169 (100%), Positives = 169/169 (100%)

Query: 1   MHLGALGFTVARSELWLRSRLWGCTPAAASAAHTPVGVSIPVLRSARFWMAGNLWGQRAA 60
           MHLGALGFTVARSELWLRSRLWGCTPAAASAAHTPVGVSIPVLRSARFWMAGNLWGQRAA
Sbjct: 1   MHLGALGFTVARSELWLRSRLWGCTPAAASAAHTPVGVSIPVLRSARFWMAGNLWGQRAA 60

Query: 61  ISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQERPVAH 120
           ISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQERPVAH
Sbjct: 61  ISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQERPVAH 120

Query: 121 DTLRRRKLESASPVASRGSGGMVPVIFRSSSVSSLRREYASTRRAPTSS 169
           DTLRRRKLESASPVASRGSGGMVPVIFRSSSVSSLRREYASTRRAPTSS
Sbjct: 121 DTLRRRKLESASPVASRGSGGMVPVIFRSSSVSSLRREYASTRRAPTSS 169


>gi|168229156 NFKB activating protein [Homo sapiens]
          Length = 415

 Score = 33.9 bits (76), Expect = 0.068
 Identities = 35/114 (30%), Positives = 46/114 (40%), Gaps = 17/114 (14%)

Query: 56  GQRAAISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQE 115
           G R   S +SP P  S RS   R  ++ +CS  ++G+         R GL+H     SQ 
Sbjct: 18  GGRRRSSSKSPKPSKSARSPRGRRSRSHSCS--RSGD---------RNGLTHQLGGLSQG 66

Query: 116 RPVAHDTLRRRKLESASPVASRGSGGMVPVIFRSSSV--SSLRREYASTRRAPT 167
                   R R      P A RG    +P    SSSV   S  R Y S +  P+
Sbjct: 67  SRNQSYRSRSRSRSRERPSAPRG----IPFASASSSVYYGSYSRPYGSDKPWPS 116


>gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens]
          Length = 978

 Score = 32.0 bits (71), Expect = 0.26
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 1/91 (1%)

Query: 80  GKARTCSQEKAGEC-AWAMLSTLRPGLSHCCSSASQERPVAHDTLRRRKLESASPVASRG 138
           G     S    G C A   LSTLR   +       Q RP+    L+   L       SR 
Sbjct: 345 GSTEDLSSLDEGPCIAGTGLSTLRRLENLRLDQLHQLRPIGTRGLKLPSLSHTGTTVSRR 404

Query: 139 SGGMVPVIFRSSSVSSLRREYASTRRAPTSS 169
            G  V +  RSSS SS+   Y  +RR+  +S
Sbjct: 405 VGPPVSLERRSSSSSSISSAYTVSRRSSLAS 435


>gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]
          Length = 1106

 Score = 32.0 bits (71), Expect = 0.26
 Identities = 29/91 (31%), Positives = 37/91 (40%), Gaps = 1/91 (1%)

Query: 80  GKARTCSQEKAGEC-AWAMLSTLRPGLSHCCSSASQERPVAHDTLRRRKLESASPVASRG 138
           G     S    G C A   LSTLR   +       Q RP+    L+   L       SR 
Sbjct: 473 GSTEDLSSLDEGPCIAGTGLSTLRRLENLRLDQLHQLRPIGTRGLKLPSLSHTGTTVSRR 532

Query: 139 SGGMVPVIFRSSSVSSLRREYASTRRAPTSS 169
            G  V +  RSSS SS+   Y  +RR+  +S
Sbjct: 533 VGPPVSLERRSSSSSSISSAYTVSRRSSLAS 563


>gi|116256363 transmembrane protease, serine 13 [Homo sapiens]
          Length = 567

 Score = 31.6 bits (70), Expect = 0.34
 Identities = 48/150 (32%), Positives = 60/150 (40%), Gaps = 17/150 (11%)

Query: 23  GCTPAAASAAHTPVGVSIPVLRS-ARFWMAGNLWGQR--AAISPRSPSPGLSDRSRLVRA 79
           G +PA AS A TP G + P   S A+   AG   G+   A  SP    PG +   R   A
Sbjct: 18  GASPAQASPAGTPPGRASPAQASPAQASPAGTPPGRASPAQASPAGTPPGRASPGRASPA 77

Query: 80  GKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQERPVAHDTLRRRKLESASPVASRGS 139
             +   +       A A LS    G S    SAS        +  R  L  A+PV     
Sbjct: 78  QASPAQASPARASPALASLSRSSSGRSSSARSAS-----VTTSPTRVYLVRATPV----- 127

Query: 140 GGMVPVIFRSSSVSSLRREYASTRRAPTSS 169
            G VP+  RSS   S     A TR +P +S
Sbjct: 128 -GAVPI--RSSPARSAPATRA-TRESPGTS 153


>gi|157502169 astacin-like metalloendopeptidase [Homo sapiens]
          Length = 431

 Score = 30.4 bits (67), Expect = 0.76
 Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 1/86 (1%)

Query: 56  GQRAAISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLS-HCCSSASQ 114
           G  A  + RSP+P      RL+ A  A + S + +G  A        PG S H   S + 
Sbjct: 292 GSHAHSTGRSPAPASLSLQRLLEALSAESRSPDPSGSSAGGQPVPAGPGESPHGWESPAL 351

Query: 115 ERPVAHDTLRRRKLESASPVASRGSG 140
           ++  A  + R+ +  ++SP +  G+G
Sbjct: 352 KKLSAEASARQPQTLASSPRSRPGAG 377


>gi|239756545 PREDICTED: hypothetical protein XP_002344931 [Homo
           sapiens]
          Length = 427

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 32/117 (27%), Positives = 45/117 (38%), Gaps = 24/117 (20%)

Query: 45  SARFWMAGNLWGQRAAI-------SPRSPSPGLSDRSRLV-RAGKARTCSQEKAGEC--A 94
           S+R W  G   G  A +       + R+P  GL DR RL+ R   AR    E   +C  +
Sbjct: 130 SSRCWSRGPTSGLGATLGGTVLPPAARTPRDGLRDRGRLLSRNSTARRSFLELPSKCLTS 189

Query: 95  WAMLSTLRPGLSHCCSSASQERPVAHDTLRRRKLESASPVASRGSGGMVPVIFRSSS 151
           W  +   RPG          ERP   +             AS  SG  +P++  S +
Sbjct: 190 WLWVIAPRPG--------PAERPFPGEK------GPPGAAASAVSGSWLPIMLESEA 232


>gi|239745511 PREDICTED: hypothetical protein XP_002343508 [Homo
           sapiens]
          Length = 427

 Score = 29.6 bits (65), Expect = 1.3
 Identities = 32/117 (27%), Positives = 45/117 (38%), Gaps = 24/117 (20%)

Query: 45  SARFWMAGNLWGQRAAI-------SPRSPSPGLSDRSRLV-RAGKARTCSQEKAGEC--A 94
           S+R W  G   G  A +       + R+P  GL DR RL+ R   AR    E   +C  +
Sbjct: 130 SSRCWSRGPTSGLGATLGGTVLPPAARTPRDGLRDRGRLLSRNSTARRSFLELPSKCLTS 189

Query: 95  WAMLSTLRPGLSHCCSSASQERPVAHDTLRRRKLESASPVASRGSGGMVPVIFRSSS 151
           W  +   RPG          ERP   +             AS  SG  +P++  S +
Sbjct: 190 WLWVIAPRPG--------PAERPFPGEK------GPPGAAASAVSGSWLPIMLESEA 232


>gi|86991432 GLI-Kruppel family member GLI2 [Homo sapiens]
          Length = 1586

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 6/68 (8%)

Query: 99  STLRPGLSHCCSSASQERPVAHDTLRRRKLESASPVASRGSGGMVPVIFRSSSVSSLRRE 158
           S L  G  H  SSA    P++ D  RR      S  AS+ SGG   +    +   SLR +
Sbjct: 839 SPLGAGRPHNASSADSYDPISTDASRR------SSEASQCSGGSGLLNLTPAQQYSLRAK 892

Query: 159 YASTRRAP 166
           YA+    P
Sbjct: 893 YAAATGGP 900


>gi|239753698 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 416

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 67  SPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPG 104
           SP  + R RL RAG+A   +  +    +WA+ +TL+ G
Sbjct: 365 SPTATRRGRLPRAGQAGQAAHLRRPTISWALYATLQKG 402


>gi|239749124 PREDICTED: zinc finger protein 716 [Homo sapiens]
          Length = 1215

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 14/77 (18%)

Query: 53  NLWGQRAAISPRSPSPG-------LSDRSRLVRAGKARTCSQEKAGECAWAM------LS 99
           +LW +  A+ P  PSPG       L  R R     +   C  E A +  W +       S
Sbjct: 437 DLWARFPAVLPWVPSPGKGTAHARLHFRXRPAEGARRHRCGAEAAPQ-TWGVQGQLTPTS 495

Query: 100 TLRPGLSHCCSSASQER 116
           T  PG   C S  S+ R
Sbjct: 496 TRAPGQGGCLSDGSRWR 512


>gi|239748278 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 416

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 67  SPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPG 104
           SP  + R RL RAG+A   +  +    +WA+ +TL+ G
Sbjct: 365 SPTATRRGRLPRAGQAGQAAHLRRPTISWALYATLQKG 402


>gi|50083281 KIAA1853 protein [Homo sapiens]
          Length = 611

 Score = 29.3 bits (64), Expect = 1.7
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 62  SPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLR 102
           S RSPSPG   RSR     ++R+ SQ ++   A +  ST R
Sbjct: 571 SSRSPSPGSRSRSRSRSRSRSRSRSQSRSYSSADSYSSTRR 611


>gi|20336330 BCL2-like 12 isoform 1 [Homo sapiens]
          Length = 334

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 1/57 (1%)

Query: 12  RSELWLRSRLWGCTPAAASAAHTPVGVSIPVLR-SARFWMAGNLWGQRAAISPRSPS 67
           R ++  R R WG  P A+ A    +G+    LR  A F   G   G      PRSP+
Sbjct: 67  RPQVEWRRRRWGPGPGASMAGSEELGLREDTLRVLAAFLRRGEAAGSPVPTPPRSPA 123


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 28/116 (24%), Positives = 47/116 (40%), Gaps = 23/116 (19%)

Query: 57  QRAAISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQER 116
           +R     R+P  G S    LVR G++ + + ++ G                  S +S ER
Sbjct: 688 RRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGR-----------------SGSSSER 730

Query: 117 PVAHDTLRRRKLESASP------VASRGSGGMVPVIFRSSSVSSLRREYASTRRAP 166
                T +RR   ++SP      ++SR S  +     ++ S  SLRR  + +   P
Sbjct: 731 KNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSPCP 786


>gi|33286436 gametogenetin [Homo sapiens]
          Length = 652

 Score = 28.9 bits (63), Expect = 2.2
 Identities = 23/86 (26%), Positives = 34/86 (39%), Gaps = 2/86 (2%)

Query: 59  AAISPRSP--SPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQER 116
           A  +P SP        R++   AG+AR  +   AGE   A  +    GLS  C    + R
Sbjct: 191 ALATPASPPTESQAGPRNQGQTAGRARGGAPPHAGEGEMAQPADSESGLSLLCKITFKSR 250

Query: 117 PVAHDTLRRRKLESASPVASRGSGGM 142
           P          L + + +   G GG+
Sbjct: 251 PSLAPPAASSSLAAKASLGGGGGGGL 276


>gi|239757601 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 308

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 13/109 (11%)

Query: 13  SELWLRSRLWGCTPAAASAAHTPVGVSIPVLR----SARFWMAGNLW--GQRAAISPRSP 66
           S   LR+   G    A  A  TP        R    S+  WMA  LW  G+    SP  P
Sbjct: 41  SSACLRAPPRGLRTMALMACTTPAPTCEKEFRYCVVSSASWMAVRLWLSGKATCCSPGPP 100

Query: 67  SPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQE 115
           +   S  +R +R   +   S  +   C     ST R  L   CS +  E
Sbjct: 101 N--CSSATRALRGSSSLRASVSRRATC-----STKRRALWKFCSPSRSE 142


>gi|239752103 PREDICTED: hypothetical protein XP_002348112 [Homo
           sapiens]
          Length = 308

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 13/109 (11%)

Query: 13  SELWLRSRLWGCTPAAASAAHTPVGVSIPVLR----SARFWMAGNLW--GQRAAISPRSP 66
           S   LR+   G    A  A  TP        R    S+  WMA  LW  G+    SP  P
Sbjct: 41  SSACLRAPPRGLRTMALMACTTPAPTCEKEFRYCVVSSASWMAVRLWLSGKATCCSPGPP 100

Query: 67  SPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQE 115
           +   S  +R +R   +   S  +   C     ST R  L   CS +  E
Sbjct: 101 N--CSSATRALRGSSSLRASVSRRATC-----STKRRALWKFCSPSRSE 142


>gi|239746607 PREDICTED: hypothetical protein XP_002343798 [Homo
           sapiens]
          Length = 452

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 31/109 (28%), Positives = 40/109 (36%), Gaps = 13/109 (11%)

Query: 13  SELWLRSRLWGCTPAAASAAHTPVGVSIPVLR----SARFWMAGNLW--GQRAAISPRSP 66
           S   LR+   G    A  A  TP        R    S+  WMA  LW  G+    SP  P
Sbjct: 41  SSACLRAPPRGLRTMALMACTTPAPTCEKEFRYCVVSSASWMAVRLWLSGKATCCSPGPP 100

Query: 67  SPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQE 115
           +   S  +R +R   +   S  +   C     ST R  L   CS +  E
Sbjct: 101 N--CSSATRALRGSSSLRASVSRRATC-----STKRRALWKFCSPSRSE 142


>gi|130978956 adrenocortical dysplasia homolog isoform 1 [Homo
           sapiens]
          Length = 544

 Score = 28.5 bits (62), Expect = 2.9
 Identities = 30/111 (27%), Positives = 47/111 (42%), Gaps = 4/111 (3%)

Query: 38  VSIPVLRSARFWMAGNLWGQRAAISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAM 97
           V+ P  R+   W +G+L     A  PR+ + G+  R  L+R   A+     + G  AWA 
Sbjct: 13  VNGPASRAPAGWTSGSLHTGPRAGRPRAQARGVRGRGLLLRPRPAKELPLPRKGG-AWAP 71

Query: 98  LSTLRP--GLSHCCSSASQERPVAHDTLRRRKLESASPVASRGSGGMVPVI 146
                P   L      A   R V    +R   L S +P + R +G ++ V+
Sbjct: 72  AGNPGPLHPLGVAVGMAGSGRLVLRPWIRELILGSETPSSPR-AGQLLEVL 121


>gi|130979214 adrenocortical dysplasia homolog isoform 3 [Homo
           sapiens]
          Length = 528

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 3/102 (2%)

Query: 38  VSIPVLRSARFWMAGNLWGQRAAISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAM 97
           V+ P  R+   W +G+L     A  PR+ + G+  R  L+R   A+     + G  AWA 
Sbjct: 13  VNGPASRAPAGWTSGSLHTGPRAGRPRAQARGVRGRGLLLRPRPAKELPLPRKGG-AWAP 71

Query: 98  LSTLRP--GLSHCCSSASQERPVAHDTLRRRKLESASPVASR 137
                P   L      A   R V    +R   L S +P + R
Sbjct: 72  AGNPGPLHPLGVAVGMAGSGRLVLRPWIRELILGSETPSSPR 113


>gi|130978962 adrenocortical dysplasia homolog isoform 2 [Homo
           sapiens]
          Length = 541

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 28/102 (27%), Positives = 41/102 (40%), Gaps = 3/102 (2%)

Query: 38  VSIPVLRSARFWMAGNLWGQRAAISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAM 97
           V+ P  R+   W +G+L     A  PR+ + G+  R  L+R   A+     + G  AWA 
Sbjct: 13  VNGPASRAPAGWTSGSLHTGPRAGRPRAQARGVRGRGLLLRPRPAKELPLPRKGG-AWAP 71

Query: 98  LSTLRP--GLSHCCSSASQERPVAHDTLRRRKLESASPVASR 137
                P   L      A   R V    +R   L S +P + R
Sbjct: 72  AGNPGPLHPLGVAVGMAGSGRLVLRPWIRELILGSETPSSPR 113


>gi|125858485 hypothetical protein LOC80209 isoform 2 [Homo sapiens]
          Length = 922

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 7/149 (4%)

Query: 23  GCTPAAASAAHTPVGVSIPVLRSARFWMAGNLWG--QRAAISPRSPSPGLSDRSRLVRAG 80
           G TP+ A     P+GV+ P+L + + ++  N       +A+S    S GL+  S L    
Sbjct: 431 GSTPSVAG----PLGVNSPLLSALKGFLTSNDTNLINSSALSSAVTS-GLASLSSLTLQN 485

Query: 81  KARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQERPVAHDTLRRRKLESASPVASRGSG 140
              + S         A+ +  R              PVA+ T     L   SP+A+  S 
Sbjct: 486 SDSSASAPNKCYAPSAIPTPQRTSTPGLALFPGLPSPVANSTSTPLTLPVQSPLATAASA 545

Query: 141 GMVPVIFRSSSVSSLRREYASTRRAPTSS 169
                +   SS S LR  +  T     SS
Sbjct: 546 STSVPVSCGSSASLLRGPHPGTSDLHISS 574


>gi|125656155 hypothetical protein LOC80209 isoform 1 [Homo sapiens]
          Length = 944

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 37/149 (24%), Positives = 56/149 (37%), Gaps = 7/149 (4%)

Query: 23  GCTPAAASAAHTPVGVSIPVLRSARFWMAGNLWG--QRAAISPRSPSPGLSDRSRLVRAG 80
           G TP+ A     P+GV+ P+L + + ++  N       +A+S    S GL+  S L    
Sbjct: 453 GSTPSVAG----PLGVNSPLLSALKGFLTSNDTNLINSSALSSAVTS-GLASLSSLTLQN 507

Query: 81  KARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQERPVAHDTLRRRKLESASPVASRGSG 140
              + S         A+ +  R              PVA+ T     L   SP+A+  S 
Sbjct: 508 SDSSASAPNKCYAPSAIPTPQRTSTPGLALFPGLPSPVANSTSTPLTLPVQSPLATAASA 567

Query: 141 GMVPVIFRSSSVSSLRREYASTRRAPTSS 169
                +   SS S LR  +  T     SS
Sbjct: 568 STSVPVSCGSSASLLRGPHPGTSDLHISS 596


>gi|150170653 EF-hand calcium binding domain 4A [Homo sapiens]
          Length = 294

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 20/65 (30%), Positives = 27/65 (41%), Gaps = 11/65 (16%)

Query: 76  LVRAGKARTCSQEKAGECAWAMLSTLRPGL-----------SHCCSSASQERPVAHDTLR 124
           L + G A    +++A    WA L   RP L           S C   A++ER      LR
Sbjct: 142 LEQLGVAPVLGKQRAVRTLWARLQRERPELLGSFEDVLIRASACLEEAARERDGLEQALR 201

Query: 125 RRKLE 129
           RR+ E
Sbjct: 202 RRESE 206


>gi|167234422 hematopoietic cell-specific Lyn substrate 1 [Homo
           sapiens]
          Length = 486

 Score = 28.1 bits (61), Expect = 3.8
 Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 1/42 (2%)

Query: 120 HDTLRRRKLESASPVASRGSGGMVPVIFRSSSVSSLRREYAS 161
           HD LR++++ES  P AS G GG   V       S++  EY +
Sbjct: 65  HDVLRKKEMESG-PKASHGYGGRFGVERDRMDKSAVGHEYVA 105


>gi|41352712 inhibitor of nuclear factor kappa B kinase beta subunit
           [Homo sapiens]
          Length = 756

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 18/71 (25%), Positives = 25/71 (35%)

Query: 9   TVARSELWLRSRLWGCTPAAASAAHTPVGVSIPVLRSARFWMAGNLWGQRAAISPRSPSP 68
           TV R +   +  LW     A S    PV  S   + ++R    G L  Q +  S   P P
Sbjct: 642 TVVRLQEKRQKELWNLLKIACSKVRGPVSGSPDSMNASRLSQPGQLMSQPSTASNSLPEP 701

Query: 69  GLSDRSRLVRA 79
                  +  A
Sbjct: 702 AKKSEELVAEA 712


>gi|148612809 WNK lysine deficient protein kinase 1 [Homo sapiens]
          Length = 2382

 Score = 27.7 bits (60), Expect = 4.9
 Identities = 26/82 (31%), Positives = 34/82 (41%), Gaps = 3/82 (3%)

Query: 60  AISPRSPSPGLSDRSRLVRAGKARTCSQEKAGECAWAMLSTLRPGLSHCCSSASQERPVA 119
           A  P+S  P    R   V A      +Q+     A    +   P  S   SS S++RPV+
Sbjct: 109 AAVPQSAPPE-PHREETVTATATSQVAQQPPAAAAPGEQAVAGPAPSTVPSSTSKDRPVS 167

Query: 120 HDTLRRRKLESASPVASRGSGG 141
             +L   K E   P A  GSGG
Sbjct: 168 QPSLVGSKEE--PPPARSGSGG 187


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.127    0.394 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,667,395
Number of Sequences: 37866
Number of extensions: 286397
Number of successful extensions: 995
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 23
Number of HSP's that attempted gapping in prelim test: 978
Number of HSP's gapped (non-prelim): 44
length of query: 169
length of database: 18,247,518
effective HSP length: 95
effective length of query: 74
effective length of database: 14,650,248
effective search space: 1084118352
effective search space used: 1084118352
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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