Guide to the Human Genome
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Search of human proteins with 239742330

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239742330 PREDICTED: hypothetical protein XP_002342492 [Homo
sapiens]
         (563 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753837 PREDICTED: similar to Uncharacterized protein LP905...  1179   0.0  
gi|239748400 PREDICTED: hypothetical protein XP_002346661 [Homo ...  1179   0.0  
gi|239742330 PREDICTED: hypothetical protein XP_002342492 [Homo ...  1179   0.0  
gi|46485773 syncytin 2 [Homo sapiens]                                  73   8e-13
gi|195963433 syncytin precursor [Homo sapiens]                         56   8e-08
gi|48949851 syncytin precursor [Homo sapiens]                          56   8e-08
gi|145651814 endogenous retroviral sequence 3 [Homo sapiens]           45   1e-04
gi|157057547 Fc receptor-like 6 [Homo sapiens]                         33   0.91 
gi|109659839 solute carrier family 5 (sodium/glucose cotransport...    32   1.2  
gi|109659836 solute carrier family 5 (sodium/glucose cotransport...    32   1.2  
gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [H...    32   1.6  
gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Ho...    32   1.6  
gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [H...    32   1.6  
gi|31542280 hypothetical protein LOC221481 [Homo sapiens]              32   1.6  
gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]    31   2.6  
gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]    31   2.6  
gi|165932370 FAT tumor suppressor homolog 4 [Homo sapiens]             30   4.5  
gi|50659091 scavenger receptor cysteine-rich type 1 precursor [H...    30   4.5  
gi|223633941 hypothetical protein LOC389730 [Homo sapiens]             30   7.7  
gi|91206406 hypothetical protein LOC642265 [Homo sapiens]              30   7.7  
gi|51243032 oxysterol-binding protein-like protein 8 isoform b [...    30   7.7  
gi|18079218 oxysterol-binding protein-like protein 8 isoform a [...    30   7.7  
gi|133892686 hypothetical protein LOC727830 [Homo sapiens]             30   7.7  
gi|146231958 hypothetical protein LOC647060 [Homo sapiens]             30   7.7  

>gi|239753837 PREDICTED: similar to Uncharacterized protein LP9056
           [Homo sapiens]
          Length = 563

 Score = 1179 bits (3050), Expect = 0.0
 Identities = 563/563 (100%), Positives = 563/563 (100%)

Query: 1   MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF 60
           MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF
Sbjct: 1   MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF 60

Query: 61  VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE 120
           VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE
Sbjct: 61  VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE 120

Query: 121 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG 180
           GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG
Sbjct: 121 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG 180

Query: 181 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL 240
           TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL
Sbjct: 181 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL 240

Query: 241 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL 300
           YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL
Sbjct: 241 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL 300

Query: 301 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP 360
           CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP
Sbjct: 301 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP 360

Query: 361 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS 420
           PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS
Sbjct: 361 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS 420

Query: 421 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF 480
           RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF
Sbjct: 421 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF 480

Query: 481 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE 540
           AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE
Sbjct: 481 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE 540

Query: 541 TSCQVSNRAMKGLTTHQYDTSLL 563
           TSCQVSNRAMKGLTTHQYDTSLL
Sbjct: 541 TSCQVSNRAMKGLTTHQYDTSLL 563


>gi|239748400 PREDICTED: hypothetical protein XP_002346661 [Homo
           sapiens]
          Length = 563

 Score = 1179 bits (3050), Expect = 0.0
 Identities = 563/563 (100%), Positives = 563/563 (100%)

Query: 1   MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF 60
           MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF
Sbjct: 1   MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF 60

Query: 61  VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE 120
           VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE
Sbjct: 61  VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE 120

Query: 121 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG 180
           GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG
Sbjct: 121 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG 180

Query: 181 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL 240
           TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL
Sbjct: 181 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL 240

Query: 241 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL 300
           YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL
Sbjct: 241 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL 300

Query: 301 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP 360
           CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP
Sbjct: 301 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP 360

Query: 361 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS 420
           PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS
Sbjct: 361 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS 420

Query: 421 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF 480
           RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF
Sbjct: 421 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF 480

Query: 481 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE 540
           AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE
Sbjct: 481 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE 540

Query: 541 TSCQVSNRAMKGLTTHQYDTSLL 563
           TSCQVSNRAMKGLTTHQYDTSLL
Sbjct: 541 TSCQVSNRAMKGLTTHQYDTSLL 563


>gi|239742330 PREDICTED: hypothetical protein XP_002342492 [Homo
           sapiens]
          Length = 563

 Score = 1179 bits (3050), Expect = 0.0
 Identities = 563/563 (100%), Positives = 563/563 (100%)

Query: 1   MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF 60
           MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF
Sbjct: 1   MGSLSNYALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVF 60

Query: 61  VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE 120
           VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE
Sbjct: 61  VPASASTWWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLE 120

Query: 121 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG 180
           GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG
Sbjct: 121 GNFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLG 180

Query: 181 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL 240
           TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL
Sbjct: 181 TRQCSWFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRNSGLTWSGNDTCLYSCQNQTKGLL 240

Query: 241 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL 300
           YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL
Sbjct: 241 YQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRTPTWWLTGSNLTLSVNNSGLFFL 300

Query: 301 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP 360
           CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP
Sbjct: 301 CGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNP 360

Query: 361 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS 420
           PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS
Sbjct: 361 PLYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASAS 420

Query: 421 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF 480
           RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF
Sbjct: 421 RKDHVLDIPTTQRQTACGTVGKQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQGIF 480

Query: 481 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE 540
           AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE
Sbjct: 481 AKVGDWFRSWGYVLLIVLFCLFIFVLIYVRVFRKSRRSLNSQPLNLALSPQQSAQLLVSE 540

Query: 541 TSCQVSNRAMKGLTTHQYDTSLL 563
           TSCQVSNRAMKGLTTHQYDTSLL
Sbjct: 541 TSCQVSNRAMKGLTTHQYDTSLL 563


>gi|46485773 syncytin 2 [Homo sapiens]
          Length = 538

 Score = 72.8 bits (177), Expect = 8e-13
 Identities = 128/588 (21%), Positives = 215/588 (36%), Gaps = 121/588 (20%)

Query: 9   LLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQ---SNCWLCEHLDNAEQPELVFVPASA 65
           LL L LT  L     P   L    + L   T     +NCWLC    + E P   + PAS 
Sbjct: 5   LLVLILTPSLAAYRHPDFPLLEKAQQLLQSTGSPYSTNCWLCTS-SSTETPGTAY-PASP 62

Query: 66  STWWTYSGQWMYERVWYPQAE----VQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEG 121
             W +   +      W P  +      N   S+ ++            G  F  + L+ G
Sbjct: 63  REWTSIEAELHISYRWDPNLKGLMRPANSLLSTVKQDFPDIRQKPPIFGPIFTNINLM-G 121

Query: 122 NFSLCVENKNGSGPFLGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRND---------- 171
              +CV  K  +G  +G +P   CN     DS   T+       N+ R+           
Sbjct: 122 IAPICVMAKRKNGTNVGTLPSTVCNVTFTVDSNQQTYQTYTH--NQFRHQPRFPKPPNIT 179

Query: 172 -------DDDTSVCLGT-RQCS----WFAGCTNRTWNSSAVPLIGLPNTQDYKWVDRN-S 218
                  D  +  C G    CS    WF         +  + +  L +T ++  +D+  +
Sbjct: 180 FPQGTLLDKSSRFCQGRPSSCSTRNFWFRPADY----NQCLQISNLSSTAEWVLLDQTRN 235

Query: 219 GLTWSGNDTCLYSCQNQTKGLLYQLFRNLFCSYGLTEAHGKWRCADASITNDKGHDGHRT 278
            L W          +N+TKG        +    G+T A      +  S       +   T
Sbjct: 236 SLFW----------ENKTKGANQSQTPCVQVLAGMTIATSYLGISAVS-------EFFGT 278

Query: 279 PTWWLTGSNLTLSVNNSGLFFLCGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQIT 338
               L   +++  +   G F++CG  +++  P  W+G C +GY+ P +            
Sbjct: 279 SLTPLFHFHISTCLKTQGAFYICGQSIHQCLPSNWTGTCTIGYVTPDI------------ 326

Query: 339 NLRSFIHKVTPHRCTQGDTDNP-PLYCNPKDNSTIRAL--FPSL-----------GTYDL 384
               FI          G+   P P+Y N       RA+   P L           G   +
Sbjct: 327 ----FI--------APGNLSLPIPIYGNSPLPRVRRAIHFIPLLAGLGILAGTGTGIAGI 374

Query: 385 EKAILN---ISKAMEQEFSATKQTLEAHQSKVSSLASASRKDHV-LDIPTTQRQTACGTV 440
            KA L    +SK +        + L   Q ++ SLA+   ++   LD+ T  +   C  +
Sbjct: 375 TKASLTYSQLSKEIANNIDTMAKALTTMQEQIDSLAAVVLQNRRGLDMLTAAQGGICLAL 434

Query: 441 GKQCCLYINYSEEIKSNIQRLHEASENLKNVPL---LDWQGIFAKVGDWFRSWGY----- 492
            ++CC ++N S +++ NI++L   + +L+       L+W+G +     WF SW       
Sbjct: 435 DEKCCFWVNQSGKVQDNIRQLLNQASSLRERATQGWLNWEGTW----KWF-SWVLPLTGP 489

Query: 493 ---VLLIVLF--CLFIFVLIYV-----RVFRKSRRSLNSQPLNLALSP 530
              +LL++LF  CL   +  +V      +  ++  S    P N+  SP
Sbjct: 490 LVSLLLLLLFGPCLLNLITQFVSSRLQAIKLQTNLSAGRHPRNIQESP 537


>gi|195963433 syncytin precursor [Homo sapiens]
          Length = 538

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 28/227 (12%)

Query: 295 SGLFFLCGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQ 354
           SG+FF+CG   Y+         C L +LVP +T Y         +L S++        ++
Sbjct: 266 SGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIYTE------QDLYSYV-------ISK 312

Query: 355 GDTDNPPLYCNPKDNSTIRALFPSLGTYDLEKAIL-NISKAMEQEFSATKQTLEAHQSKV 413
                 P+         + AL   +G           +S+ +  +      +L   Q ++
Sbjct: 313 PRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMERVADSLVTLQDQL 372

Query: 414 SSLASASRKDH-VLDIPTTQRQTACGTVGKQCCLYINYS----EEIKSNIQRLHEASENL 468
           +SLA+   ++   LD+ T +R   C  +G++CC Y+N S    E++K    R+   +E L
Sbjct: 373 NSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKEIRDRIQRRAEEL 432

Query: 469 KNVPLLDWQGIFAKVGDWFRSW----GYVLLIVLF--CLFIFVLIYV 509
           +N     W G+ ++   W   +      ++L++LF  C+F  ++ +V
Sbjct: 433 RNTG--PW-GLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFV 476


>gi|48949851 syncytin precursor [Homo sapiens]
          Length = 538

 Score = 56.2 bits (134), Expect = 8e-08
 Identities = 52/227 (22%), Positives = 99/227 (43%), Gaps = 28/227 (12%)

Query: 295 SGLFFLCGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQ 354
           SG+FF+CG   Y+         C L +LVP +T Y         +L S++        ++
Sbjct: 266 SGIFFVCGTSAYRCLNGSSESMCFLSFLVPPMTIYTE------QDLYSYV-------ISK 312

Query: 355 GDTDNPPLYCNPKDNSTIRALFPSLGTYDLEKAIL-NISKAMEQEFSATKQTLEAHQSKV 413
                 P+         + AL   +G           +S+ +  +      +L   Q ++
Sbjct: 313 PRNKRVPILPFVIGAGVLGALGTGIGGITTSTQFYYKLSQELNGDMERVADSLVTLQDQL 372

Query: 414 SSLASASRKDH-VLDIPTTQRQTACGTVGKQCCLYINYS----EEIKSNIQRLHEASENL 468
           +SLA+   ++   LD+ T +R   C  +G++CC Y+N S    E++K    R+   +E L
Sbjct: 373 NSLAAVVLQNRRALDLLTAERGGTCLFLGEECCYYVNQSGIVTEKVKEIRDRIQRRAEEL 432

Query: 469 KNVPLLDWQGIFAKVGDWFRSW----GYVLLIVLF--CLFIFVLIYV 509
           +N     W G+ ++   W   +      ++L++LF  C+F  ++ +V
Sbjct: 433 RNTG--PW-GLLSQWMPWILPFLGPLAAIILLLLFGPCIFNLLVNFV 476


>gi|145651814 endogenous retroviral sequence 3 [Homo sapiens]
          Length = 604

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 45/197 (22%), Positives = 81/197 (41%), Gaps = 20/197 (10%)

Query: 295 SGLFFLCGNGVYKGFPPKWSGRCGLGYLVPSLTRYLTLNASQITNLRSFIHKVTPHRCTQ 354
           SGL+++CG   Y+  P KWSG C LG + PS   +  +   Q   L   I+  T  +  +
Sbjct: 415 SGLYWICGPQAYRQLPAKWSGACVLGTIRPS---FFLMPLKQGEALGYPIYDETKRKSKR 471

Query: 355 G-------DTDNPP----LYCNPKDNSTIRALFPSLGTYDLEKAILNISKAMEQEFSATK 403
           G       D + PP     Y  P   +           Y L + I+ +   +E   + T 
Sbjct: 472 GITIGDWKDNEWPPERIIQYYGPATWAEDGMWGYRTPVYMLNR-IIRLQAVLEIITNETA 530

Query: 404 QTLEAHQSKVSSLASASRKDHV-LDIPTTQRQTACGTVG-KQCCLYINYSEEIKSNIQRL 461
             L     + + + +   ++ + LD    Q +  CG      CCL ++   ++   I+ +
Sbjct: 531 GALNLLAQQATKMRNVIYQNRLALDYLLAQEEGVCGKFNLTNCCLELDDEGKV---IKEI 587

Query: 462 HEASENLKNVPLLDWQG 478
               + L ++P+  W+G
Sbjct: 588 TAKIQKLAHIPVQTWKG 604


>gi|157057547 Fc receptor-like 6 [Homo sapiens]
          Length = 434

 Score = 32.7 bits (73), Expect = 0.91
 Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 3/67 (4%)

Query: 449 NYSEEIKSNIQRLHEASENLKNVPLLDWQGIFAKVGDWFRSWGYVLLIVLFCLFIFVLIY 508
           NYS E ++++ R  E SE  K + L   Q +F    +W   W    L+ L  +   +L+Y
Sbjct: 273 NYSCEAENSVSR--ERSEP-KKLSLKGSQVLFTPASNWLVPWLPASLLGLMVIAAALLVY 329

Query: 509 VRVFRKS 515
           VR +RK+
Sbjct: 330 VRSWRKA 336


>gi|109659839 solute carrier family 5 (sodium/glucose
           cotransporter), member 10 isoform 1 [Homo sapiens]
          Length = 612

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 251 YGLTEAHGKWRCADASITNDKGHD-GHRTPTWWLTGSNLTLSVNNSGLFF-LCGNGVYKG 308
           + L  A G W    AS     G+    R  TWW  G++L  S   SGLF  L G+G   G
Sbjct: 28  FALNVAVGIWSSCRASRNTVNGYFLAGRDMTWWPIGASLFASSEGSGLFIGLAGSGAAGG 87


>gi|109659836 solute carrier family 5 (sodium/glucose
           cotransporter), member 10 isoform 2 [Homo sapiens]
          Length = 596

 Score = 32.3 bits (72), Expect = 1.2
 Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 2/60 (3%)

Query: 251 YGLTEAHGKWRCADASITNDKGHD-GHRTPTWWLTGSNLTLSVNNSGLFF-LCGNGVYKG 308
           + L  A G W    AS     G+    R  TWW  G++L  S   SGLF  L G+G   G
Sbjct: 28  FALNVAVGIWSSCRASRNTVNGYFLAGRDMTWWPIGASLFASSEGSGLFIGLAGSGAAGG 87


>gi|226443002 jumonji, AT rich interactive domain 1D isoform 3 [Homo
           sapiens]
          Length = 1482

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 327 TRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNPPLYCNP-KDNSTIRALFPSL-----G 380
           T  L  N S    + S+I +V    C++GD D+  L+C+   DN  I  L P L     G
Sbjct: 242 TMQLRKNHSSAQFIDSYICQV----CSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRG 297

Query: 381 TYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDH 424
            +   K IL   K   + F   + T E        +A + + D+
Sbjct: 298 IWRCPKCILAECKQPPEAFGFEQATQEYSLQSFGEMADSFKSDY 341


>gi|33356560 jumonji, AT rich interactive domain 1D isoform 2 [Homo
           sapiens]
          Length = 1539

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 327 TRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNPPLYCNP-KDNSTIRALFPSL-----G 380
           T  L  N S    + S+I +V    C++GD D+  L+C+   DN  I  L P L     G
Sbjct: 299 TMQLRKNHSSAQFIDSYICQV----CSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRG 354

Query: 381 TYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDH 424
            +   K IL   K   + F   + T E        +A + + D+
Sbjct: 355 IWRCPKCILAECKQPPEAFGFEQATQEYSLQSFGEMADSFKSDY 398


>gi|226442991 jumonji, AT rich interactive domain 1D isoform 1 [Homo
           sapiens]
          Length = 1570

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 29/104 (27%), Positives = 44/104 (42%), Gaps = 10/104 (9%)

Query: 327 TRYLTLNASQITNLRSFIHKVTPHRCTQGDTDNPPLYCNP-KDNSTIRALFPSL-----G 380
           T  L  N S    + S+I +V    C++GD D+  L+C+   DN  I  L P L     G
Sbjct: 299 TMQLRKNHSSAQFIDSYICQV----CSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRG 354

Query: 381 TYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDH 424
            +   K IL   K   + F   + T E        +A + + D+
Sbjct: 355 IWRCPKCILAECKQPPEAFGFEQATQEYSLQSFGEMADSFKSDY 398


>gi|31542280 hypothetical protein LOC221481 [Homo sapiens]
          Length = 367

 Score = 32.0 bits (71), Expect = 1.6
 Identities = 25/120 (20%), Positives = 50/120 (41%), Gaps = 13/120 (10%)

Query: 8   ALLQLTLTAFLTILVQPQHLLAPVFRTLSILTNQSNCWLCEHLDNAEQPELVFVPASAST 67
           AL+++  + ++   VQ   LL+ + +   +L +  NC +  +  N  QP           
Sbjct: 220 ALMEILQSDYILAQVQAVRLLSYLAQKNDLLYDILNCQVHSNFLNLFQP----------- 268

Query: 68  WWTYSGQWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEGNFSLCV 127
             T SG  +YE + + +   +  +   Y  V WH+      + L   + RL +   +L +
Sbjct: 269 --TQSGSLLYEVLVFAERLSEGRNAPHYHVVKWHYNEQSLHESLFGEESRLADRLLALVI 326


>gi|154350244 hypothetical protein LOC79632 isoform 2 [Homo sapiens]
          Length = 971

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 5/96 (5%)

Query: 383 DLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDHVLDIPTTQR-QTACGTVG 441
           + + A+LN+   +EQE    ++T+ A   K        +  H L+I  T+  +  C  + 
Sbjct: 476 ETKDALLNVEGELEQERQQHEETIAA--MKEEEKLKVDKMAHDLEIKWTENLRQECSKLR 533

Query: 442 KQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQ 477
           ++  L + + E+ KS + +L +  +  KN     WQ
Sbjct: 534 EE--LRLQHEEDKKSAMSQLLQLKDREKNAARDSWQ 567


>gi|154350226 hypothetical protein LOC79632 isoform 1 [Homo sapiens]
          Length = 1140

 Score = 31.2 bits (69), Expect = 2.6
 Identities = 23/96 (23%), Positives = 45/96 (46%), Gaps = 5/96 (5%)

Query: 383 DLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDHVLDIPTTQR-QTACGTVG 441
           + + A+LN+   +EQE    ++T+ A   K        +  H L+I  T+  +  C  + 
Sbjct: 596 ETKDALLNVEGELEQERQQHEETIAA--MKEEEKLKVDKMAHDLEIKWTENLRQECSKLR 653

Query: 442 KQCCLYINYSEEIKSNIQRLHEASENLKNVPLLDWQ 477
           ++  L + + E+ KS + +L +  +  KN     WQ
Sbjct: 654 EE--LRLQHEEDKKSAMSQLLQLKDREKNAARDSWQ 687


>gi|165932370 FAT tumor suppressor homolog 4 [Homo sapiens]
          Length = 4981

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 38/119 (31%), Positives = 55/119 (46%), Gaps = 16/119 (13%)

Query: 137  LGNIPKQYCNQILWFDSTDGTFMPSIDVTNESRNDDDDTSVCLGTRQCSWFAGCTNRTWN 196
            L +IP   C+      STDGTF    D+T  S ND   ++V    R   +FAG +N T +
Sbjct: 3658 LFSIPGGTCDLNSQPRSTDGTF----DLTVLS-NDGVHSTVTSNIRV--FFAGFSNATVD 3710

Query: 197  SSAVPLIGLPNTQDYKWVD-------RNSGLTWSGNDTCLYSC--QNQTKGLLYQLFRN 246
            +S +  +G+P  +D+            +S LT  G    LYS   +N    LL  + RN
Sbjct: 3711 NSILLRLGVPTVKDFLTNHYLHFLRIASSQLTGLGTAVQLYSAYEENNRTFLLAAVKRN 3769


>gi|50659091 scavenger receptor cysteine-rich type 1 precursor [Homo
           sapiens]
          Length = 1453

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 31/133 (23%)

Query: 175 TSVCLGTRQCS----WFAGCTNRTWNSSAVPLI-------------GLPNTQ---DYKWV 214
           T+ C+G  +      W   C ++ WN++A  ++             GLP+ Q   D  W+
Sbjct: 268 TNRCMGRVELKIQGRWGTVCHHK-WNNAAADVVCKQLGCGTALHFAGLPHLQSGSDVVWL 326

Query: 215 DRNSGLTWSGNDTCLYSCQNQ---TKGLLYQLFRNLFCSYGLTEAHGKWRCADASITNDK 271
           D   G++ SGN++ L+ C++        L+Q   ++ CS G   A  + R AD S  N  
Sbjct: 327 D---GVSCSGNESFLWDCRHSGTVNFDCLHQNDVSVICSDG---ADLELRLADGS-NNCS 379

Query: 272 GHDGHRTPTWWLT 284
           G    R    W T
Sbjct: 380 GRVEVRIHEQWWT 392


>gi|223633941 hypothetical protein LOC389730 [Homo sapiens]
          Length = 1343

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 74   QWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEGNFSLC 126
            QW++ +     A V   S  + +  +  + +S EAQGL  A  ++L+   SLC
Sbjct: 1168 QWIFSKKKSKPAPVTAESQKTVKNRSCVYSSSAEAQGLMTAVGQMLDKKMSLC 1220


>gi|91206406 hypothetical protein LOC642265 [Homo sapiens]
          Length = 1347

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 74   QWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEGNFSLC 126
            QW++ +     A V   S  + +  +  + +S EAQGL  A  ++L+   SLC
Sbjct: 1172 QWIFSKKKSKPAPVTAESQKTVKNRSCVYSSSAEAQGLMTAVGQMLDEKMSLC 1224


>gi|51243032 oxysterol-binding protein-like protein 8 isoform b
           [Homo sapiens]
          Length = 847

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 3/113 (2%)

Query: 381 TYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDHVLDIPTTQRQTACGTV 440
           T DL +  L+ +    Q F   K+ +  ++ + S   S S+ +  L   + +  +    +
Sbjct: 14  TKDLHQPSLSPASPHSQGFERGKEDISQNKDESSLSMSKSKSESKLYNGSEKDSSTSSKL 73

Query: 441 GKQCCLYI---NYSEEIKSNIQRLHEASENLKNVPLLDWQGIFAKVGDWFRSW 490
            K+  L +   NY EE K   + L     +   + + DW  I   +  W + W
Sbjct: 74  TKKESLKVQKKNYREEKKRATKELLSTITDPSVIVMADWLKIRGTLKSWTKLW 126


>gi|18079218 oxysterol-binding protein-like protein 8 isoform a
           [Homo sapiens]
          Length = 889

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 24/113 (21%), Positives = 46/113 (40%), Gaps = 3/113 (2%)

Query: 381 TYDLEKAILNISKAMEQEFSATKQTLEAHQSKVSSLASASRKDHVLDIPTTQRQTACGTV 440
           T DL +  L+ +    Q F   K+ +  ++ + S   S S+ +  L   + +  +    +
Sbjct: 56  TKDLHQPSLSPASPHSQGFERGKEDISQNKDESSLSMSKSKSESKLYNGSEKDSSTSSKL 115

Query: 441 GKQCCLYI---NYSEEIKSNIQRLHEASENLKNVPLLDWQGIFAKVGDWFRSW 490
            K+  L +   NY EE K   + L     +   + + DW  I   +  W + W
Sbjct: 116 TKKESLKVQKKNYREEKKRATKELLSTITDPSVIVMADWLKIRGTLKSWTKLW 168


>gi|133892686 hypothetical protein LOC727830 [Homo sapiens]
          Length = 1347

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 74   QWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEGNFSLC 126
            QW++ +     A V   S  + +  +  + +S EAQGL  A  ++L+   SLC
Sbjct: 1172 QWIFSKKKSKPAPVTAESQKTVKNRSCVYSSSAEAQGLMTAVGQMLDEKMSLC 1224


>gi|146231958 hypothetical protein LOC647060 [Homo sapiens]
          Length = 1347

 Score = 29.6 bits (65), Expect = 7.7
 Identities = 16/53 (30%), Positives = 27/53 (50%)

Query: 74   QWMYERVWYPQAEVQNHSTSSYRKVTWHWEASMEAQGLSFAQVRLLEGNFSLC 126
            QW++ +     A V   S  + +  +  + +S EAQGL  A  ++L+   SLC
Sbjct: 1172 QWIFSKKKSKPAPVTAESQKTVKNRSCVYSSSAEAQGLMTAVGQMLDEKMSLC 1224


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.133    0.428 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,820,533
Number of Sequences: 37866
Number of extensions: 971552
Number of successful extensions: 2291
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2268
Number of HSP's gapped (non-prelim): 35
length of query: 563
length of database: 18,247,518
effective HSP length: 107
effective length of query: 456
effective length of database: 14,195,856
effective search space: 6473310336
effective search space used: 6473310336
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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