LOC100288413 17197

Name: LOC100288413	Sequence: fasta or formatted (563aa)		NCBI GI: 239742330
Description: PREDICTED: hypothetical protein XP_002342492		Referenced in: DNA Transposon and Retrovirus-related Sequences
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.2 29 1 C cysteine 3.6 20 2 D aspartate 4.1 23 4 E glutamate 3.6 20 2 F phenylalanine 4.1 23 2 G glycine 6.0 34 1 H histidine 2.3 13 1 I isoleucine 3.6 20 1 K lysine 3.9 22 1 L leucine 12.1 68 2 M methionine 1.1 6 1 N asparagine 6.6 37 2 P proline 4.1 23 2 Q glutamine 5.9 33 2 R arginine 4.4 25 2 S serine 9.8 55 2 T threonine 7.8 44 2 V valine 5.2 29 1 W tryptophan 3.4 19 2 Y tyrosine 3.6 20 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein XP_002342492 LOC100293101 1.000 PREDICTED: similar to Uncharacterized protein LP905... LOC100290734 1.000 PREDICTED: hypothetical protein XP_002346661 HERV-FRD 0.042 syncytin 2 ERVWE1 0.027 syncytin precursor ERVWE1 0.027 syncytin precursor ERV3 0.017 endogenous retroviral sequence 3 FCRL6 0.007 Fc receptor-like 6 SLC5A10 0.006 solute carrier family 5 (sodium/glucose cotransport... SLC5A10 0.006 solute carrier family 5 (sodium/glucose cotransport... KDM5D 0.006 jumonji, AT rich interactive domain 1D isoform 3 [H... KDM5D 0.006 jumonji, AT rich interactive domain 1D isoform 2 [Ho... KDM5D 0.006 jumonji, AT rich interactive domain 1D isoform 1 [H... C6orf81 0.006 hypothetical protein LOC221481 FAM184A 0.005 hypothetical protein LOC79632 isoform 2 FAM184A 0.005 hypothetical protein LOC79632 isoform 1 FAT4 0.004 FAT tumor suppressor homolog 4 CD163L1 0.004 scavenger receptor cysteine-rich type 1 precursor [H... FAM75A6 0.004 hypothetical protein LOC389730 FAM75A2 0.004 hypothetical protein LOC642265 OSBPL8 0.004 oxysterol-binding protein-like protein 8 isoform b [... OSBPL8 0.004 oxysterol-binding protein-like protein 8 isoform a [... FAM75A3 0.004 hypothetical protein LOC727830 FAM75A1 0.004 hypothetical protein LOC647060 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.