LOC100128827 17159

Name: LOC100128827	Sequence: fasta or formatted (88aa)		NCBI GI: 239742234
Description: PREDICTED: similar to FSHD region gene 2 family, member C		Not currently referenced in the text
Other entries for this name: alt mRNA {88aa} PREDICTED: similar to FSHD region gene 2 family, member C alt mRNA {88aa} PREDICTED: similar to FSHD region gene 2 family, member C
Composition: Amino acid Percentage Count Longest homopolymer A alanine 2.3 2 1 C cysteine 2.3 2 1 D aspartate 4.5 4 1 E glutamate 5.7 5 1 F phenylalanine 3.4 3 1 G glycine 8.0 7 1 H histidine 3.4 3 1 I isoleucine 4.5 4 1 K lysine 12.5 11 2 L leucine 4.5 4 2 M methionine 1.1 1 1 N asparagine 2.3 2 1 P proline 11.4 10 2 Q glutamine 8.0 7 2 R arginine 6.8 6 3 S serine 12.5 11 2 T threonine 4.5 4 1 V valine 1.1 1 1 W tryptophan 0.0 0 0 Y tyrosine 1.1 1 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to FSHD region gene 2 family, me... LOC100128827 1.000 PREDICTED: similar to FSHD region gene 2 family, me... LOC100128827 1.000 PREDICTED: similar to FSHD region gene 2 family, me... LOC651959 0.640 PREDICTED: FSHD region gene 2-like LOC651959 0.640 PREDICTED: FSHD region gene 2-like FRG2C 0.634 FSHD region gene 2 family, member C FRG2B 0.602 FSHD region gene 2 family, member B LOC100288255 0.584 PREDICTED: hypothetical protein XP_002343930 FRG2 0.584 FSHD region gene 2 LOC100288801 0.578 PREDICTED: hypothetical protein XP_002342402 SFRS2IP 0.037 splicing factor, arginine/serine-rich 2, interactin... MAP3K6 0.037 mitogen-activated protein kinase kinase kinase 6 [Ho... ZMYND11 0.037 zinc finger, MYND domain containing 11 isoform a [H... ZMYND11 0.037 zinc finger, MYND domain containing 11 isoform b [H... ZMYND11 0.037 zinc finger, MYND domain containing 11 isoform a [H... ANKS1A 0.037 ankyrin repeat and sterile alpha motif domain conta... C19orf57 0.037 hypothetical protein LOC79173 KIAA1522 0.031 hypothetical protein LOC57648 LOC100129236 0.031 PREDICTED: similar to hCG1653500 LOC100129236 0.031 PREDICTED: similar to hCG1653500 HP1BP3 0.031 HP1-BP74 PHF17 0.019 PHD finger protein 17 short isoform PHF17 0.019 PHD finger protein 17 long isoform PRPF4B 0.019 serine/threonine-protein kinase PRP4K MLLT10 0.019 myeloid/lymphoid or mixed-lineage leukemia transloca... MLLT10 0.019 myeloid/lymphoid or mixed-lineage leukemia translocat... CCPG1 0.019 cell cycle progression 1 isoform 2 CCPG1 0.019 cell cycle progression 1 isoform 1 TMEM131 0.019 RW1 protein C9orf86 0.019 Rab-like GTP-binding protein 1 isoform 1 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.