Search of human proteins with 239742140

Search of human proteins with 239742140

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|239742140 PREDICTED: similar to TRIM5/cyclophilin A fusion
protein [Homo sapiens]
         (167 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|239753734 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   357   2e-99
gi|239748239 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   357   2e-99
gi|239742140 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   357   2e-99
gi|10863927 peptidylprolyl isomerase A [Homo sapiens]                 249   8e-67
gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   232   1e-61
gi|239751853 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   232   1e-61
gi|113428306 PREDICTED: similar to TRIM5/cyclophilin A fusion pr...   232   1e-61
gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]   228   2e-60
gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]    228   2e-60
gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A iso...   228   2e-60
gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens]             224   3e-59
gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]             224   3e-59
gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens]             224   3e-59
gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G ...   219   9e-58
gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens]             219   1e-57
gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens]              219   1e-57
gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens]              219   1e-57
gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   219   1e-57
gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B ...   218   1e-57
gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens]         218   1e-57
gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C ...   218   1e-57
gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   216   6e-57
gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   216   6e-57
gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E ...   214   3e-56
gi|239756631 PREDICTED: similar to TRIMCyp [Homo sapiens]             206   7e-54
gi|239751117 PREDICTED: similar to TRIMCyp [Homo sapiens]             206   7e-54
gi|239757228 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   202   8e-53
gi|239751734 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   202   8e-53
gi|239746235 PREDICTED: similar to TRIM5/CypA fusion protein [Ho...   202   8e-53
gi|239755072 PREDICTED: similar to TRIMCyp [Homo sapiens]             193   5e-50

>gi|239753734 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 167

 Score =  357 bits (917), Expect = 2e-99
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF
Sbjct: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE
Sbjct: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120

Query: 121 WLDGKHMVFGKVKEGINGQAWWLTPVHDNPCKSRILTSNNYSSKPNA 167
           WLDGKHMVFGKVKEGINGQAWWLTPVHDNPCKSRILTSNNYSSKPNA
Sbjct: 121 WLDGKHMVFGKVKEGINGQAWWLTPVHDNPCKSRILTSNNYSSKPNA 167


>gi|239748239 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 167

 Score =  357 bits (917), Expect = 2e-99
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF
Sbjct: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE
Sbjct: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120

Query: 121 WLDGKHMVFGKVKEGINGQAWWLTPVHDNPCKSRILTSNNYSSKPNA 167
           WLDGKHMVFGKVKEGINGQAWWLTPVHDNPCKSRILTSNNYSSKPNA
Sbjct: 121 WLDGKHMVFGKVKEGINGQAWWLTPVHDNPCKSRILTSNNYSSKPNA 167


>gi|239742140 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 167

 Score =  357 bits (917), Expect = 2e-99
 Identities = 167/167 (100%), Positives = 167/167 (100%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF
Sbjct: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE
Sbjct: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120

Query: 121 WLDGKHMVFGKVKEGINGQAWWLTPVHDNPCKSRILTSNNYSSKPNA 167
           WLDGKHMVFGKVKEGINGQAWWLTPVHDNPCKSRILTSNNYSSKPNA
Sbjct: 121 WLDGKHMVFGKVKEGINGQAWWLTPVHDNPCKSRILTSNNYSSKPNA 167


>gi|10863927 peptidylprolyl isomerase A [Homo sapiens]
          Length = 165

 Score =  249 bits (636), Expect = 8e-67
 Identities = 118/137 (86%), Positives = 123/137 (89%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT+FFDIAVDGEPL  VSFE FADK PKTAENF ALS GEKGFGYKGSCF  IIPGF
Sbjct: 1   MVNPTVFFDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGGDFTRHNGTG KSIY EKF+DENFIL HTGPGILSMA AG NTN SQFFICTAKTE
Sbjct: 61  MCQGGDFTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLDGKH+VFGKVKEG+N
Sbjct: 121 WLDGKHVVFGKVKEGMN 137


>gi|169214050 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 210

 Score =  232 bits (591), Expect = 1e-61
 Identities = 111/135 (82%), Positives = 117/135 (86%)

Query: 2   INPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGFM 61
           +NPT+FFDIAVDGEPL  VSFE FADKFPK+AE  HALS GEKGFGYKGSCF  IIPGFM
Sbjct: 48  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 107

Query: 62  CQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTEW 121
           CQGGDFTRH  TG KS+YREKFDDENFIL HTGPGILSMA AG NTN SQ FICTAKTE 
Sbjct: 108 CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 167

Query: 122 LDGKHMVFGKVKEGI 136
           LDGKH+VFG VKEG+
Sbjct: 168 LDGKHVVFGTVKEGM 182


>gi|239751853 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 186

 Score =  232 bits (591), Expect = 1e-61
 Identities = 111/135 (82%), Positives = 117/135 (86%)

Query: 2   INPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGFM 61
           +NPT+FFDIAVDGEPL  VSFE FADKFPK+AE  HALS GEKGFGYKGSCF  IIPGFM
Sbjct: 24  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 83

Query: 62  CQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTEW 121
           CQGGDFTRH  TG KS+YREKFDDENFIL HTGPGILSMA AG NTN SQ FICTAKTE 
Sbjct: 84  CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 143

Query: 122 LDGKHMVFGKVKEGI 136
           LDGKH+VFG VKEG+
Sbjct: 144 LDGKHVVFGTVKEGM 158


>gi|113428306 PREDICTED: similar to TRIM5/cyclophilin A fusion
           protein [Homo sapiens]
          Length = 186

 Score =  232 bits (591), Expect = 1e-61
 Identities = 111/135 (82%), Positives = 117/135 (86%)

Query: 2   INPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGFM 61
           +NPT+FFDIAVDGEPL  VSFE FADKFPK+AE  HALS GEKGFGYKGSCF  IIPGFM
Sbjct: 24  VNPTVFFDIAVDGEPLGHVSFELFADKFPKSAEKVHALSTGEKGFGYKGSCFHRIIPGFM 83

Query: 62  CQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTEW 121
           CQGGDFTRH  TG KS+YREKFDDENFIL HTGPGILSMA AG NTN SQ FICTAKTE 
Sbjct: 84  CQGGDFTRHKDTGGKSLYREKFDDENFILKHTGPGILSMANAGPNTNCSQCFICTAKTEG 143

Query: 122 LDGKHMVFGKVKEGI 136
           LDGKH+VFG VKEG+
Sbjct: 144 LDGKHVVFGTVKEGM 158


>gi|169164370 PREDICTED: similar to TRIMCyp isoform 1 [Homo sapiens]
          Length = 165

 Score =  228 bits (581), Expect = 2e-60
 Identities = 107/137 (78%), Positives = 116/137 (84%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT+FF I+VDGE L  +SFE FADKFPKTAENF AL+ GEKGFGYKG CF  IIPGF
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MC GGDFT HNGTG KSIY EK DD+NFIL HTGPGILSMA AG NTN SQFFICTAK+E
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLD KH+V GKVKEG+N
Sbjct: 121 WLDSKHVVIGKVKEGMN 137


>gi|88958081 PREDICTED: similar to TRIMCyp isoform 2 [Homo sapiens]
          Length = 165

 Score =  228 bits (581), Expect = 2e-60
 Identities = 107/137 (78%), Positives = 116/137 (84%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT+FF I+VDGE L  +SFE FADKFPKTAENF AL+ GEKGFGYKG CF  IIPGF
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MC GGDFT HNGTG KSIY EK DD+NFIL HTGPGILSMA AG NTN SQFFICTAK+E
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLD KH+V GKVKEG+N
Sbjct: 121 WLDSKHVVIGKVKEGMN 137


>gi|88953813 PREDICTED: similar to peptidylprolyl isomerase A
           isoform 2 [Homo sapiens]
          Length = 165

 Score =  228 bits (581), Expect = 2e-60
 Identities = 107/137 (78%), Positives = 116/137 (84%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT+FF I+VDGE L  +SFE FADKFPKTAENF AL+ GEKGFGYKG CF  IIPGF
Sbjct: 1   MVNPTVFFHISVDGESLGRISFELFADKFPKTAENFCALNTGEKGFGYKGCCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MC GGDFT HNGTG KSIY EK DD+NFIL HTGPGILSMA AG NTN SQFFICTAK+E
Sbjct: 61  MCHGGDFTHHNGTGGKSIYGEKVDDDNFILKHTGPGILSMANAGPNTNGSQFFICTAKSE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLD KH+V GKVKEG+N
Sbjct: 121 WLDSKHVVIGKVKEGMN 137


>gi|239753685 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  224 bits (571), Expect = 3e-59
 Identities = 107/137 (78%), Positives = 112/137 (81%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT+F DIAV GEPL  + FE FADK PKT ENFHALS GEKGFGYKGSCF  IIPG 
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQ GDFT HNGTG KSI  EKFDD+NFIL H GPGILSMA  G NTNS Q FICTAK E
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLDGKH+VFGKVKEGIN
Sbjct: 121 WLDGKHVVFGKVKEGIN 137


>gi|239748293 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  224 bits (571), Expect = 3e-59
 Identities = 107/137 (78%), Positives = 112/137 (81%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT+F DIAV GEPL  + FE FADK PKT ENFHALS GEKGFGYKGSCF  IIPG 
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQ GDFT HNGTG KSI  EKFDD+NFIL H GPGILSMA  G NTNS Q FICTAK E
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLDGKH+VFGKVKEGIN
Sbjct: 121 WLDGKHVVFGKVKEGIN 137


>gi|113414711 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 164

 Score =  224 bits (571), Expect = 3e-59
 Identities = 107/137 (78%), Positives = 112/137 (81%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT+F DIAV GEPL  + FE FADK PKT ENFHALS GEKGFGYKGSCF  IIPG 
Sbjct: 1   MVNPTVFLDIAVHGEPLGGIPFELFADKIPKTPENFHALSTGEKGFGYKGSCFHRIIPGV 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQ GDFT HNGTG KSI  EKFDD+NFIL H GPGILSMA  G NTNS Q FICTAK E
Sbjct: 61  MCQRGDFTSHNGTGGKSIQGEKFDDKNFILKHAGPGILSMANTGPNTNSFQCFICTAKAE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLDGKH+VFGKVKEGIN
Sbjct: 121 WLDGKHVVFGKVKEGIN 137


>gi|178057341 peptidylprolyl isomerase A (cyclophilin A)-like 4G
           [Homo sapiens]
          Length = 164

 Score =  219 bits (558), Expect = 9e-58
 Identities = 104/137 (75%), Positives = 111/137 (81%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+N  +FFDI VDG+PL  +S + FADK PKTAENF ALS GEKGF YKGSCF  IIPGF
Sbjct: 1   MVNSVIFFDITVDGKPLGRISIKQFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGGDFT  NGTG KSIY EKFDDEN I  HTG GILSMA AG NTN SQFFICTAKTE
Sbjct: 61  MCQGGDFTHPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICTAKTE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLDGKH+ FGKVKE +N
Sbjct: 121 WLDGKHVAFGKVKERVN 137


>gi|169211469 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  219 bits (557), Expect = 1e-57
 Identities = 104/134 (77%), Positives = 111/134 (82%)

Query: 4   PTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGFMCQ 63
           PT+FFDI ++ +PL  VSF+ FADKFPKTAENF ALS GEKGFGYK SCF  IIPGFMCQ
Sbjct: 7   PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQ 66

Query: 64  GGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTEWLD 123
           GGDFT HNGTG KSIY EKFDDENFIL HTGPGI SMA AG NTN SQF  CTAKT WLD
Sbjct: 67  GGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLD 126

Query: 124 GKHMVFGKVKEGIN 137
           G H+V GKVKEG+N
Sbjct: 127 GMHVVLGKVKEGMN 140


>gi|89042897 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  219 bits (557), Expect = 1e-57
 Identities = 104/134 (77%), Positives = 111/134 (82%)

Query: 4   PTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGFMCQ 63
           PT+FFDI ++ +PL  VSF+ FADKFPKTAENF ALS GEKGFGYK SCF  IIPGFMCQ
Sbjct: 7   PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQ 66

Query: 64  GGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTEWLD 123
           GGDFT HNGTG KSIY EKFDDENFIL HTGPGI SMA AG NTN SQF  CTAKT WLD
Sbjct: 67  GGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLD 126

Query: 124 GKHMVFGKVKEGIN 137
           G H+V GKVKEG+N
Sbjct: 127 GMHVVLGKVKEGMN 140


>gi|29737770 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 168

 Score =  219 bits (557), Expect = 1e-57
 Identities = 104/134 (77%), Positives = 111/134 (82%)

Query: 4   PTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGFMCQ 63
           PT+FFDI ++ +PL  VSF+ FADKFPKTAENF ALS GEKGFGYK SCF  IIPGFMCQ
Sbjct: 7   PTVFFDITINSKPLGHVSFKLFADKFPKTAENFPALSTGEKGFGYKSSCFHRIIPGFMCQ 66

Query: 64  GGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTEWLD 123
           GGDFT HNGTG KSIY EKFDDENFIL HTGPGI SMA AG NTN SQF  CTAKT WLD
Sbjct: 67  GGDFTHHNGTGVKSIYGEKFDDENFILKHTGPGIFSMANAGPNTNGSQFCNCTAKTAWLD 126

Query: 124 GKHMVFGKVKEGIN 137
           G H+V GKVKEG+N
Sbjct: 127 GMHVVLGKVKEGMN 140


>gi|169163387 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 272

 Score =  219 bits (557), Expect = 1e-57
 Identities = 105/137 (76%), Positives = 114/137 (83%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT+FFDI+V G+PL  VSF  FADK  KTA+NF ALS GEKG  YKGSCF  IIPGF
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGGDFT +NGTG KS+Y EKFDDENFIL    PGILSMAKAG NTN SQFFICTAKTE
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAKTE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WL GKH+VFGKVKEG+N
Sbjct: 121 WLIGKHVVFGKVKEGMN 137


>gi|219842199 peptidylprolyl isomerase A (cyclophilin A)-like 4B
           [Homo sapiens]
          Length = 164

 Score =  218 bits (556), Expect = 1e-57
 Identities = 104/137 (75%), Positives = 111/137 (81%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+N  +FFDI VDG+PL  +S + FADK  KTAENF ALS GEKGF YKGSCF  IIPGF
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGGDFTRHNGTG KSIY EKFDDEN I  HTG GILSMA AG NTN SQFFIC AKTE
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLDGKH+ FGKVKE +N
Sbjct: 121 WLDGKHVAFGKVKERVN 137


>gi|30102944 peptidylprolyl isomerase A-like 4A [Homo sapiens]
          Length = 164

 Score =  218 bits (556), Expect = 1e-57
 Identities = 104/137 (75%), Positives = 111/137 (81%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+N  +FFDI VDG+PL  +S + FADK  KTAENF ALS GEKGF YKGSCF  IIPGF
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGGDFTRHNGTG KSIY EKFDDEN I  HTG GILSMA AG NTN SQFFIC AKTE
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLDGKH+ FGKVKE +N
Sbjct: 121 WLDGKHVAFGKVKERVN 137


>gi|209417936 peptidylprolyl isomerase A (cyclophilin A)-like 4C
           [Homo sapiens]
          Length = 164

 Score =  218 bits (556), Expect = 1e-57
 Identities = 104/137 (75%), Positives = 111/137 (81%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+N  +FFDI VDG+PL  +S + FADK  KTAENF ALS GEKGF YKGSCF  IIPGF
Sbjct: 1   MVNSVVFFDITVDGKPLGRISIKLFADKILKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGGDFTRHNGTG KSIY EKFDDEN I  HTG GILSMA AG NTN SQFFIC AKTE
Sbjct: 61  MCQGGDFTRHNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLDGKH+ FGKVKE +N
Sbjct: 121 WLDGKHVAFGKVKERVN 137


>gi|169163623 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score =  216 bits (551), Expect = 6e-57
 Identities = 104/137 (75%), Positives = 113/137 (82%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT+FFDI+V G+PL  VSF  FADK  KTA+NF ALS GEKG  YKGSCF  IIPGF
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGGDFT +NGTG KS+Y EKFDDENFIL    PGILSMAKAG NTN SQFFICTA TE
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WL GKH+VFGKVKEG+N
Sbjct: 121 WLIGKHVVFGKVKEGMN 137


>gi|169164185 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 234

 Score =  216 bits (551), Expect = 6e-57
 Identities = 104/137 (75%), Positives = 113/137 (82%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT+FFDI+V G+PL  VSF  FADK  KTA+NF ALS GEKG  YKGSCF  IIPGF
Sbjct: 1   MVNPTVFFDISVSGKPLGHVSFRIFADKLSKTAQNFRALSTGEKGLDYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGGDFT +NGTG KS+Y EKFDDENFIL    PGILSMAKAG NTN SQFFICTA TE
Sbjct: 61  MCQGGDFTYNNGTGGKSLYGEKFDDENFILKRIRPGILSMAKAGPNTNGSQFFICTAXTE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WL GKH+VFGKVKEG+N
Sbjct: 121 WLIGKHVVFGKVKEGMN 137


>gi|221139811 peptidylprolyl isomerase A (cyclophilin A)-like 4E
           [Homo sapiens]
          Length = 164

 Score =  214 bits (545), Expect = 3e-56
 Identities = 102/137 (74%), Positives = 110/137 (80%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+N  +FF+I  DG+PL  +S + FADK PKTAENF ALS GEKGF YKGSCF  IIPGF
Sbjct: 1   MVNSVVFFEITRDGKPLGRISIKLFADKIPKTAENFRALSTGEKGFRYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGGDFTR NGTG KSIY EKFDDEN I  HTG GILSMA AG NTN SQFFIC AKTE
Sbjct: 61  MCQGGDFTRPNGTGDKSIYGEKFDDENLIRKHTGSGILSMANAGPNTNGSQFFICAAKTE 120

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLDGKH+ FGKVKE +N
Sbjct: 121 WLDGKHVAFGKVKERVN 137


>gi|239756631 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 166

 Score =  206 bits (524), Expect = 7e-54
 Identities = 100/137 (72%), Positives = 111/137 (81%), Gaps = 1/137 (0%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT+FF++A+D +PL  +SF  FADK PKTAENFHALS GEKGFGYKGSCF  IIPGF
Sbjct: 1   MVNPTVFFEMAIDSKPLSHISFXLFADKLPKTAENFHALSTGEKGFGYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGG FT HNGTG KSIY EK DDENFIL HT PG LSMA AG NTN S+FFICTAKT 
Sbjct: 61  MCQGGGFTCHNGTGGKSIYGEKLDDENFILKHTCPGTLSMANAGPNTNGSRFFICTAKTV 120

Query: 121 WLDGKHMVFGKVKEGIN 137
            +  KH+V  KVKEG+N
Sbjct: 121 -VGQKHVVSSKVKEGMN 136


>gi|239751117 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 166

 Score =  206 bits (524), Expect = 7e-54
 Identities = 100/137 (72%), Positives = 111/137 (81%), Gaps = 1/137 (0%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT+FF++A+D +PL  +SF  FADK PKTAENFHALS GEKGFGYKGSCF  IIPGF
Sbjct: 1   MVNPTVFFEMAIDSKPLSHISFXLFADKLPKTAENFHALSTGEKGFGYKGSCFHRIIPGF 60

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MCQGG FT HNGTG KSIY EK DDENFIL HT PG LSMA AG NTN S+FFICTAKT 
Sbjct: 61  MCQGGGFTCHNGTGGKSIYGEKLDDENFILKHTCPGTLSMANAGPNTNGSRFFICTAKTV 120

Query: 121 WLDGKHMVFGKVKEGIN 137
            +  KH+V  KVKEG+N
Sbjct: 121 -VGQKHVVSSKVKEGMN 136


>gi|239757228 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  202 bits (515), Expect = 8e-53
 Identities = 98/137 (71%), Positives = 108/137 (78%), Gaps = 5/137 (3%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT FF+     EP   +S + FADKFPKTAEN  ALSIGEKGFGYKGSCF  IIPGF
Sbjct: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MC GGDFT HNG+G K IY EKFDDENFIL  TG GILS   AG NTN SQFFIC+AK+E
Sbjct: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLDG+H+ FGKVKEG+N
Sbjct: 116 WLDGEHVFFGKVKEGMN 132


>gi|239751734 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  202 bits (515), Expect = 8e-53
 Identities = 98/137 (71%), Positives = 108/137 (78%), Gaps = 5/137 (3%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT FF+     EP   +S + FADKFPKTAEN  ALSIGEKGFGYKGSCF  IIPGF
Sbjct: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MC GGDFT HNG+G K IY EKFDDENFIL  TG GILS   AG NTN SQFFIC+AK+E
Sbjct: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLDG+H+ FGKVKEG+N
Sbjct: 116 WLDGEHVFFGKVKEGMN 132


>gi|239746235 PREDICTED: similar to TRIM5/CypA fusion protein [Homo
           sapiens]
          Length = 156

 Score =  202 bits (515), Expect = 8e-53
 Identities = 98/137 (71%), Positives = 108/137 (78%), Gaps = 5/137 (3%)

Query: 1   MINPTMFFDIAVDGEPLRCVSFEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGF 60
           M+NPT FF+     EP   +S + FADKFPKTAEN  ALSIGEKGFGYKGSCF  IIPGF
Sbjct: 1   MVNPTKFFN-----EPWGRISIQLFADKFPKTAENVCALSIGEKGFGYKGSCFHRIIPGF 55

Query: 61  MCQGGDFTRHNGTGSKSIYREKFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTE 120
           MC GGDFT HNG+G K IY EKFDDENFIL  TG GILS   AG NTN SQFFIC+AK+E
Sbjct: 56  MCHGGDFTHHNGSGGKYIYGEKFDDENFILKQTGSGILSKENAGPNTNGSQFFICSAKSE 115

Query: 121 WLDGKHMVFGKVKEGIN 137
           WLDG+H+ FGKVKEG+N
Sbjct: 116 WLDGEHVFFGKVKEGMN 132


>gi|239755072 PREDICTED: similar to TRIMCyp [Homo sapiens]
          Length = 221

 Score =  193 bits (491), Expect = 5e-50
 Identities = 90/116 (77%), Positives = 97/116 (83%)

Query: 22  FEPFADKFPKTAENFHALSIGEKGFGYKGSCFQIIIPGFMCQGGDFTRHNGTGSKSIYRE 81
           F+ F +K  K + NFHA S  EKGFGYKGSCF  IIPGFMCQ GDFT HNGTGSKS+Y E
Sbjct: 79  FKLFGEKISKDSRNFHAQSTREKGFGYKGSCFHRIIPGFMCQAGDFTNHNGTGSKSLYGE 138

Query: 82  KFDDENFILMHTGPGILSMAKAGSNTNSSQFFICTAKTEWLDGKHMVFGKVKEGIN 137
           KFD ENFIL HTGPGILSMA  G NTNSSQFFICTAKTEWLDGKH+VFGKVKEG++
Sbjct: 139 KFDHENFILKHTGPGILSMANVGLNTNSSQFFICTAKTEWLDGKHVVFGKVKEGMS 194


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.137    0.442 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,108,668
Number of Sequences: 37866
Number of extensions: 310796
Number of successful extensions: 508
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 406
Number of HSP's gapped (non-prelim): 83
length of query: 167
length of database: 18,247,518
effective HSP length: 95
effective length of query: 72
effective length of database: 14,650,248
effective search space: 1054817856
effective search space used: 1054817856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.