LOC256374 17125

Name: LOC256374	Sequence: fasta or formatted (167aa)		NCBI GI: 239742140
Description: PREDICTED: similar to TRIM5/cyclophilin A fusion protein		Referenced in: Peptidylprolyl Isomerases
Other entries for this name: alt mRNA [167aa] PREDICTED: similar to TRIM5/cyclophilin A fusion protein alt mRNA [167aa] PREDICTED: similar to TRIM5/cyclophilin A fusion protein
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.4 9 1 C cysteine 3.0 5 1 D aspartate 4.8 8 2 E glutamate 4.8 8 1 F phenylalanine 9.0 15 2 G glycine 10.2 17 2 H histidine 3.0 5 1 I isoleucine 7.2 12 3 K lysine 7.8 13 1 L leucine 4.2 7 1 M methionine 3.6 6 1 N asparagine 6.6 11 2 P proline 5.4 9 1 Q glutamine 2.4 4 1 R arginine 2.4 4 1 S serine 7.8 13 2 T threonine 6.0 10 1 V valine 3.0 5 1 W tryptophan 1.8 3 2 Y tyrosine 1.8 3 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC256374 1.000 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC256374 1.000 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... PPIA 0.675 peptidylprolyl isomerase A LOC390956 0.623 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC390956 0.623 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC390956 0.623 PREDICTED: similar to TRIM5/cyclophilin A fusion pr... LOC643997 0.611 PREDICTED: similar to TRIMCyp isoform 1 LOC643997 0.611 PREDICTED: similar to TRIMCyp isoform 2 LOC643997 0.611 PREDICTED: similar to peptidylprolyl isomerase A iso... LOC131055 0.599 PREDICTED: similar to TRIMCyp LOC131055 0.599 PREDICTED: similar to TRIMCyp LOC131055 0.599 PREDICTED: similar to TRIMCyp PPIAL4G 0.584 peptidylprolyl isomerase A (cyclophilin A)-like 4G ... LOC342541 0.584 PREDICTED: similar to TRIMCyp LOC342541 0.584 PREDICTED: similar to TRIMCyp LOC342541 0.584 PREDICTED: similar to TRIMCyp LOC650157 0.584 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... PPIAL4B 0.581 peptidylprolyl isomerase A (cyclophilin A)-like 4B ... PPIAL4A 0.581 peptidylprolyl isomerase A-like 4A PPIAL4C 0.581 peptidylprolyl isomerase A (cyclophilin A)-like 4C ... LOC650157 0.575 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC650157 0.575 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... PPIAL4E 0.569 peptidylprolyl isomerase A (cyclophilin A)-like 4E ... LOC401859 0.545 PREDICTED: similar to TRIMCyp LOC401859 0.545 PREDICTED: similar to TRIMCyp LOC126170 0.533 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.533 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC126170 0.533 PREDICTED: similar to TRIM5/CypA fusion protein [Ho... LOC392352 0.506 PREDICTED: similar to TRIMCyp Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.