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Search of human proteins with 239742133
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239742133 PREDICTED: hypothetical protein XP_002342440 [Homo
sapiens]
(175 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753743 PREDICTED: hypothetical protein [Homo sapiens] 370 e-103
gi|239748232 PREDICTED: hypothetical protein XP_002346598 [Homo ... 370 e-103
gi|239742133 PREDICTED: hypothetical protein XP_002342440 [Homo ... 370 e-103
gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens] 35 0.043
gi|239751065 PREDICTED: hypothetical protein XP_002347692 [Homo ... 33 0.097
gi|239743055 PREDICTED: hypothetical protein XP_002342730 [Homo ... 33 0.16
gi|253683544 POM121 membrane glycoprotein-like 2 [Homo sapiens] 31 0.48
gi|7662260 kelch repeat and BTB (POZ) domain containing 11 [Homo... 30 0.82
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 30 1.1
gi|239751251 PREDICTED: hypothetical protein [Homo sapiens] 30 1.1
gi|61175239 transcription elongation factor A (SII)-like 5 [Homo... 30 1.1
gi|7657665 zinc finger and BTB domain containing 32 [Homo sapiens] 30 1.1
gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo ... 29 1.8
gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo ... 29 1.8
gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo sap... 29 1.8
gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo sap... 29 1.8
gi|150170699 kinesin family member 26A [Homo sapiens] 29 1.8
gi|238908499 sciellin isoform 1 [Homo sapiens] 29 2.4
gi|238908497 sciellin isoform 2 [Homo sapiens] 29 2.4
gi|168229226 hypothetical protein LOC401399 [Homo sapiens] 29 2.4
gi|55749431 transcription elongation factor A (SII)-like 3 [Homo... 29 2.4
gi|14249718 transcription elongation factor A (SII)-like 3 [Homo... 29 2.4
gi|42733592 hypothetical protein LOC399693 [Homo sapiens] 29 2.4
gi|7706435 headcase [Homo sapiens] 28 3.1
gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] 28 3.1
gi|110227615 echinoderm microtubule associated protein like 3 [H... 28 3.1
gi|239754301 PREDICTED: hypothetical protein XP_002345934 [Homo ... 28 4.1
gi|239748840 PREDICTED: hypothetical protein XP_002346835 [Homo ... 28 4.1
gi|239742867 PREDICTED: hypothetical protein XP_002342667 [Homo ... 28 4.1
gi|116292180 outer dense fiber of sperm tails 3B [Homo sapiens] 28 4.1
>gi|239753743 PREDICTED: hypothetical protein [Homo sapiens]
Length = 175
Score = 370 bits (950), Expect = e-103
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MFTLRWARHPAHLWLCTAPHGVRAMTRRGSGKKRPCVPVHTPVPPRPYLAQKWGQEDLPR 60
MFTLRWARHPAHLWLCTAPHGVRAMTRRGSGKKRPCVPVHTPVPPRPYLAQKWGQEDLPR
Sbjct: 1 MFTLRWARHPAHLWLCTAPHGVRAMTRRGSGKKRPCVPVHTPVPPRPYLAQKWGQEDLPR 60
Query: 61 EAALWLLLHPRRLSGSGGRQVEVLSGGPSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAG 120
EAALWLLLHPRRLSGSGGRQVEVLSGGPSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAG
Sbjct: 61 EAALWLLLHPRRLSGSGGRQVEVLSGGPSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAG 120
Query: 121 KVVSRAGASAVCRSLEESPCQPWVPAAAAAKTDGTDLAGRREPWMALPGSLLERC 175
KVVSRAGASAVCRSLEESPCQPWVPAAAAAKTDGTDLAGRREPWMALPGSLLERC
Sbjct: 121 KVVSRAGASAVCRSLEESPCQPWVPAAAAAKTDGTDLAGRREPWMALPGSLLERC 175
>gi|239748232 PREDICTED: hypothetical protein XP_002346598 [Homo
sapiens]
Length = 175
Score = 370 bits (950), Expect = e-103
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MFTLRWARHPAHLWLCTAPHGVRAMTRRGSGKKRPCVPVHTPVPPRPYLAQKWGQEDLPR 60
MFTLRWARHPAHLWLCTAPHGVRAMTRRGSGKKRPCVPVHTPVPPRPYLAQKWGQEDLPR
Sbjct: 1 MFTLRWARHPAHLWLCTAPHGVRAMTRRGSGKKRPCVPVHTPVPPRPYLAQKWGQEDLPR 60
Query: 61 EAALWLLLHPRRLSGSGGRQVEVLSGGPSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAG 120
EAALWLLLHPRRLSGSGGRQVEVLSGGPSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAG
Sbjct: 61 EAALWLLLHPRRLSGSGGRQVEVLSGGPSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAG 120
Query: 121 KVVSRAGASAVCRSLEESPCQPWVPAAAAAKTDGTDLAGRREPWMALPGSLLERC 175
KVVSRAGASAVCRSLEESPCQPWVPAAAAAKTDGTDLAGRREPWMALPGSLLERC
Sbjct: 121 KVVSRAGASAVCRSLEESPCQPWVPAAAAAKTDGTDLAGRREPWMALPGSLLERC 175
>gi|239742133 PREDICTED: hypothetical protein XP_002342440 [Homo
sapiens]
Length = 175
Score = 370 bits (950), Expect = e-103
Identities = 175/175 (100%), Positives = 175/175 (100%)
Query: 1 MFTLRWARHPAHLWLCTAPHGVRAMTRRGSGKKRPCVPVHTPVPPRPYLAQKWGQEDLPR 60
MFTLRWARHPAHLWLCTAPHGVRAMTRRGSGKKRPCVPVHTPVPPRPYLAQKWGQEDLPR
Sbjct: 1 MFTLRWARHPAHLWLCTAPHGVRAMTRRGSGKKRPCVPVHTPVPPRPYLAQKWGQEDLPR 60
Query: 61 EAALWLLLHPRRLSGSGGRQVEVLSGGPSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAG 120
EAALWLLLHPRRLSGSGGRQVEVLSGGPSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAG
Sbjct: 61 EAALWLLLHPRRLSGSGGRQVEVLSGGPSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAG 120
Query: 121 KVVSRAGASAVCRSLEESPCQPWVPAAAAAKTDGTDLAGRREPWMALPGSLLERC 175
KVVSRAGASAVCRSLEESPCQPWVPAAAAAKTDGTDLAGRREPWMALPGSLLERC
Sbjct: 121 KVVSRAGASAVCRSLEESPCQPWVPAAAAAKTDGTDLAGRREPWMALPGSLLERC 175
>gi|162951873 ventral anterior homeobox 1 isoform a [Homo sapiens]
Length = 334
Score = 34.7 bits (78), Expect = 0.043
Identities = 22/62 (35%), Positives = 26/62 (41%)
Query: 93 LPSLLPCLAWAAGGAVTTGSSVGALSAGKVVSRAGASAVCRSLEESPCQPWVPAAAAAKT 152
LP+LLP A A G+ G S+ AL AG A A+A P PA A
Sbjct: 193 LPALLPPCATGALGSALRGPSLPALGAGAAAGSAAAAAAAAPGPAGAASPHPPAVGGAPG 252
Query: 153 DG 154
G
Sbjct: 253 PG 254
>gi|239751065 PREDICTED: hypothetical protein XP_002347692 [Homo
sapiens]
Length = 537
Score = 33.5 bits (75), Expect = 0.097
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 17/95 (17%)
Query: 68 LHPRRLSGSG--GRQVEVLSGGPSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAGKVVSR 125
L +++G G G QVE L+G S W W G A G + K
Sbjct: 271 LQAEQMAGMGVLGPQVEALAGELSSWAQ-------LWGEGQAPRPGPAERPFPGEKGPPG 323
Query: 126 AGASAVCRSLEESPCQPWVPAAAAAKTDGTDLAGR 160
A ASAV S W+P ++ GTD AG+
Sbjct: 324 AAASAVSGS--------WLPIMLESEAGGTDAAGQ 350
>gi|239743055 PREDICTED: hypothetical protein XP_002342730 [Homo
sapiens]
Length = 235
Score = 32.7 bits (73), Expect = 0.16
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Query: 108 VTTGSSVGALSAGKVVSRAGASAVCRSLEE---SPCQPWVPAAAAAKTDGTDLAGRREPW 164
V++ S A AG V A A+CR+ + S C P +P + +++ GR+E W
Sbjct: 89 VSSSSKSSACGAGPGVG-AAKGALCRTRTQHGHSECGPGIPKPPSRESEAGGDGGRQEAW 147
Query: 165 MALPGSL 171
+ + G L
Sbjct: 148 LCVLGKL 154
>gi|253683544 POM121 membrane glycoprotein-like 2 [Homo sapiens]
Length = 1035
Score = 31.2 bits (69), Expect = 0.48
Identities = 32/126 (25%), Positives = 50/126 (39%), Gaps = 10/126 (7%)
Query: 14 WLCTAP---HGVRAMTRRGSGKKRPCVPVHTPVPPRPYLAQKWGQEDLPREAALWLLLHP 70
WL + P + A+T RP P+ P+P GQ+ P + AL +
Sbjct: 738 WLASTPSISNLTPAITSPLGSSSRPPFPLSQGANPQPAFGATNGQKQGPSQPALMPSVSS 797
Query: 71 RRLSGSGGRQVEVLSGGPS----VWVLPSLLPCLAWAAGGAVT---TGSSVGALSAGKVV 123
L GS + P+ + S L CL +A + T T S +G + AG +
Sbjct: 798 SFLFGSSAVALPTPMPTPAQPAFISTTQSALGCLTPSASTSQTPASTWSGIGGIPAGFPI 857
Query: 124 SRAGAS 129
S+A +
Sbjct: 858 SQASTT 863
>gi|7662260 kelch repeat and BTB (POZ) domain containing 11 [Homo
sapiens]
Length = 623
Score = 30.4 bits (67), Expect = 0.82
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
Query: 95 SLLPCLAWAAG--GAVTTGSSVGALSAGKVVSRAGASAVCRSLEESPCQPWVPAAAAAKT 152
++ PC+ + GA S GA S + GAS S EESP Q AA A T
Sbjct: 4 AVAPCVLYPGTEPGAAGESESEGAASPAQTPCSLGASLCFSSGEESPPQSLASAAEGAAT 63
Query: 153 DGTDLAGRR 161
G R
Sbjct: 64 SPPSSGGPR 72
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 30.0 bits (66), Expect = 1.1
Identities = 24/85 (28%), Positives = 34/85 (40%), Gaps = 4/85 (4%)
Query: 94 PSLLPCLAWAAGGAVTTGSSVGALSAGKVVSRAGASAVCRSLEESPCQPWVPAAAAAKTD 153
PS P +A AA + V A SA GA+A + + + + P A AA +
Sbjct: 1114 PSSAPAVASAAEPTLALSQVVAAASALAAAPGIGAAAAAAGFDSASARWFQPVANAADAE 1173
Query: 154 GT----DLAGRREPWMALPGSLLER 174
D+AG P P + L R
Sbjct: 1174 AVRGAQDVAGGSNPGAHNPSANLAR 1198
>gi|239751251 PREDICTED: hypothetical protein [Homo sapiens]
Length = 201
Score = 30.0 bits (66), Expect = 1.1
Identities = 14/38 (36%), Positives = 18/38 (47%)
Query: 120 GKVVSRAGASAVCRSLEESPCQPWVPAAAAAKTDGTDL 157
G+VVSR+G +S E PC+ W P G L
Sbjct: 160 GEVVSRSGVGGRWQSKERHPCRAWGPMVGDCTRGGLKL 197
>gi|61175239 transcription elongation factor A (SII)-like 5 [Homo
sapiens]
Length = 206
Score = 30.0 bits (66), Expect = 1.1
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 118 SAGKVVSRAGASAVCRSLEESPCQPWVPAAAAAKTD-GTD 156
S GK S+A + R+ E+ P + +VP A KTD GTD
Sbjct: 86 SEGKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTD 125
>gi|7657665 zinc finger and BTB domain containing 32 [Homo sapiens]
Length = 487
Score = 30.0 bits (66), Expect = 1.1
Identities = 41/166 (24%), Positives = 55/166 (33%), Gaps = 24/166 (14%)
Query: 8 RHPAHLWLCTAPHGVRAMTRRGSGKKRPCVPVHTPVPPRPYLAQ-KWGQEDLPREAALW- 65
+H WL P G R+ G P + T V PRP A+ W P ALW
Sbjct: 208 KHGVLTWLRENPGGSEESLRKLPGPLPPAGSLQTSVTPRPSWAEAPWLVGGQP---ALWS 264
Query: 66 LLLHPRRLSGSGGRQVEVLSGGPSVW-----VLPSLLPCLAWAAGGAVTTGSSVGALSAG 120
+LL P R VW L P W+ ++ + G+L G
Sbjct: 265 ILLMPPRYGIPFYHSTPTTGAWQEVWREQRIPLSLNAPKGLWSQNQLASSSPTPGSLPQG 324
Query: 121 KV-----------VSRAGASAVCRSLEES---PCQPWVPAAAAAKT 152
GA A C E+ P +P P A A++
Sbjct: 325 PAQLSPGEMEESDQGHTGALATCAGHEDKAGCPPRPHPPPAPPARS 370
>gi|239750914 PREDICTED: hypothetical protein XP_002347614 [Homo
sapiens]
Length = 492
Score = 29.3 bits (64), Expect = 1.8
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 70 PRRLSGSGGRQVEVLSGGPSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAGKVVSRAGAS 129
P R SG R + P + LP C A A GA +G LS G + R G +
Sbjct: 384 PLRAQRSGARPG---APAPPLPCLPPAAVCHALAGAGAPGGRLELG-LSPGTRLIRGGGA 439
Query: 130 AVCRSLEESPCQPWVPAAAAAKTDGTDLA 158
AV + +P W P T DL+
Sbjct: 440 AVPTAAPPAPLPRWGPGPLPGPTGLFDLS 468
>gi|239745312 PREDICTED: hypothetical protein XP_002343435 [Homo
sapiens]
Length = 492
Score = 29.3 bits (64), Expect = 1.8
Identities = 27/89 (30%), Positives = 35/89 (39%), Gaps = 4/89 (4%)
Query: 70 PRRLSGSGGRQVEVLSGGPSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAGKVVSRAGAS 129
P R SG R + P + LP C A A GA +G LS G + R G +
Sbjct: 384 PLRAQRSGARPG---APAPPLPCLPPAAVCHALAGAGAPGGRLELG-LSPGTRLIRGGGA 439
Query: 130 AVCRSLEESPCQPWVPAAAAAKTDGTDLA 158
AV + +P W P T DL+
Sbjct: 440 AVPTAAPPAPLPRWGPGPLPGPTGLFDLS 468
>gi|56549666 tyrosine kinase, non-receptor, 2 isoform 1 [Homo
sapiens]
Length = 1038
Score = 29.3 bits (64), Expect = 1.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 18 APHGVRAMTRRGSGKKRPCVPVHTPVPPRP 47
AP G A + G +P VP P+PPRP
Sbjct: 720 APAGSPAPSPSPGGDDKPQVPPRVPIPPRP 749
>gi|58331191 tyrosine kinase, non-receptor, 2 isoform 2 [Homo
sapiens]
Length = 1086
Score = 29.3 bits (64), Expect = 1.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 18 APHGVRAMTRRGSGKKRPCVPVHTPVPPRP 47
AP G A + G +P VP P+PPRP
Sbjct: 798 APAGSPAPSPSPGGDDKPQVPPRVPIPPRP 827
>gi|150170699 kinesin family member 26A [Homo sapiens]
Length = 1882
Score = 29.3 bits (64), Expect = 1.8
Identities = 21/74 (28%), Positives = 26/74 (35%), Gaps = 10/74 (13%)
Query: 101 AWAAGGAVTT----------GSSVGALSAGKVVSRAGASAVCRSLEESPCQPWVPAAAAA 150
AW GG T+ G S G +A RA S + P P PA
Sbjct: 274 AWGRGGVCTSALVTPTPGSVGGSTGPSAAASFFIRAMQKLSLASKRKKPHPPPPPATRGT 333
Query: 151 KTDGTDLAGRREPW 164
T TD +G + W
Sbjct: 334 STYPTDFSGVLQLW 347
>gi|238908499 sciellin isoform 1 [Homo sapiens]
Length = 688
Score = 28.9 bits (63), Expect = 2.4
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 14 WLCTAPHGVRAMTRRGSGKKRPCVPVHTPVPPRP 47
W P G A + G+ ++ P VH P+PP+P
Sbjct: 163 WFPPPPPGYNASSSTGTRRREP--GVHPPIPPKP 194
>gi|238908497 sciellin isoform 2 [Homo sapiens]
Length = 668
Score = 28.9 bits (63), Expect = 2.4
Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 14 WLCTAPHGVRAMTRRGSGKKRPCVPVHTPVPPRP 47
W P G A + G+ ++ P VH P+PP+P
Sbjct: 163 WFPPPPPGYNASSSTGTRRREP--GVHPPIPPKP 194
>gi|168229226 hypothetical protein LOC401399 [Homo sapiens]
Length = 899
Score = 28.9 bits (63), Expect = 2.4
Identities = 28/83 (33%), Positives = 39/83 (46%), Gaps = 10/83 (12%)
Query: 75 GSGGRQVEVLSGGPSVWVLPSLLPCL-AWAAGGAVTTGSSVGALSAGKVVSRAGAS-AVC 132
G+GGR E SG S P LP AW AG +V++GS G +SR +S +C
Sbjct: 768 GTGGRASE-RSGEASGPAAPPELPSPGAWPAGSSVSSGSFCG-------LSRDSSSMLLC 819
Query: 133 RSLEESPCQPWVPAAAAAKTDGT 155
S + P P V + + G+
Sbjct: 820 SSPDRPPRCPLVCVLSPPRPSGS 842
>gi|55749431 transcription elongation factor A (SII)-like 3 [Homo
sapiens]
Length = 200
Score = 28.9 bits (63), Expect = 2.4
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 120 GKVVSRAGASAVCRSLEESPCQPWVPAAAAAKTD-GTD 156
GK S+A + R+ E+ P + +VP A KTD GTD
Sbjct: 82 GKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTD 119
>gi|14249718 transcription elongation factor A (SII)-like 3 [Homo
sapiens]
Length = 200
Score = 28.9 bits (63), Expect = 2.4
Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 120 GKVVSRAGASAVCRSLEESPCQPWVPAAAAAKTD-GTD 156
GK S+A + R+ E+ P + +VP A KTD GTD
Sbjct: 82 GKPASQAKPESQPRAAEKRPAEDYVPRKAKRKTDRGTD 119
>gi|42733592 hypothetical protein LOC399693 [Homo sapiens]
Length = 953
Score = 28.9 bits (63), Expect = 2.4
Identities = 20/66 (30%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 88 PSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAGKVVSRAGASAVCRSLEESPCQPWVPAA 147
P W LP W+ G G S ++S+G++ +G VC S +E P Q P
Sbjct: 88 PGPWGKACSLPM--WSTGPEARDGDS--SVSSGRLSCSSGGHDVCVSWKERPPQVLGPQQ 143
Query: 148 AAAKTD 153
K+D
Sbjct: 144 RPRKSD 149
>gi|7706435 headcase [Homo sapiens]
Length = 543
Score = 28.5 bits (62), Expect = 3.1
Identities = 22/71 (30%), Positives = 32/71 (45%), Gaps = 5/71 (7%)
Query: 74 SGSGGRQVEVLSGGPSVWVLPSLLPCLAWAAGGAVTTGSSVGALSAG----KVVSRAGAS 129
+G+G +G + L + C A AA GA G + GA AG + AGA+
Sbjct: 25 NGAGALAAAGAAGAAAGGALAAAAGCGA-AAAGAPGAGGAAGAGGAGTGAANAAAAAGAA 83
Query: 130 AVCRSLEESPC 140
A + E+PC
Sbjct: 84 AAGDAKNEAPC 94
>gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens]
Length = 1541
Score = 28.5 bits (62), Expect = 3.1
Identities = 40/147 (27%), Positives = 52/147 (35%), Gaps = 18/147 (12%)
Query: 35 PCVPVHTPVPPRPYLAQKWGQEDLPREAALWLLLHPRRLSGSGGRQ--VEVLSGGPSVWV 92
P VPV VPPRP L + G + E L L+ G RQ V+ LS VW
Sbjct: 24 PAVPVGASVPPRPLLPLQPGMPHVCAEQELTLV---------GRRQPCVQALSHTVPVW- 73
Query: 93 LPSLLPCLAWAAGGAVTTGSSVGALSAGKVVSRAGASAVCRSLEESP----CQPWVPAAA 148
+ AW G T +G +R CR + P C +A+
Sbjct: 74 -KAGCGWQAWCVGHERRTVYYMGYRQVYTTEART-VLRCCRGWMQQPDEEGCLSAECSAS 131
Query: 149 AAKTDGTDLAGRREPWMALPGSLLERC 175
G + G +P PG RC
Sbjct: 132 LCFHGGRCVPGSAQPCHCPPGFQGPRC 158
>gi|110227615 echinoderm microtubule associated protein like 3 [Homo
sapiens]
Length = 896
Score = 28.5 bits (62), Expect = 3.1
Identities = 19/73 (26%), Positives = 28/73 (38%), Gaps = 7/73 (9%)
Query: 94 PSLLPCLAWAAGGAVTTGSSVGAL-------SAGKVVSRAGASAVCRSLEESPCQPWVPA 146
P +PC + G + TG S G + S K R GA + ++
Sbjct: 459 PKFIPCFVFLPDGDILTGDSEGNILTWGRSPSDSKTPGRGGAKETYGIVAQAHAHEGSIF 518
Query: 147 AAAAKTDGTDLAG 159
A + DGT L+G
Sbjct: 519 ALCLRRDGTVLSG 531
>gi|239754301 PREDICTED: hypothetical protein XP_002345934 [Homo
sapiens]
Length = 221
Score = 28.1 bits (61), Expect = 4.1
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 26 TRRGSGKKRPCVPVHTPVPPRPYLAQKWGQEDLPREAALWLLLHPRRLSGSGGRQVEVLS 85
T RGS RP P V A G E + + LL R + ++L+
Sbjct: 119 TPRGSAPPRPPGPHLRVVAAHLAWAAGGGAEVVVLTLVVPLLHGQRHVHALVCDGEQILA 178
Query: 86 GGPSVWVL-PSLLPCLAWAAGGAVTTGSSVGALS 118
P++ V+ P LPC+ GG + S G++S
Sbjct: 179 AAPALLVVAPHALPCVGLGEGGQLLVPSLQGSMS 212
>gi|239748840 PREDICTED: hypothetical protein XP_002346835 [Homo
sapiens]
Length = 221
Score = 28.1 bits (61), Expect = 4.1
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 26 TRRGSGKKRPCVPVHTPVPPRPYLAQKWGQEDLPREAALWLLLHPRRLSGSGGRQVEVLS 85
T RGS RP P V A G E + + LL R + ++L+
Sbjct: 119 TPRGSAPPRPPGPHLRVVAAHLAWAAGGGAEVVVLTLVVPLLHGQRHVHALVCDGEQILA 178
Query: 86 GGPSVWVL-PSLLPCLAWAAGGAVTTGSSVGALS 118
P++ V+ P LPC+ GG + S G++S
Sbjct: 179 AAPALLVVAPHALPCVGLGEGGQLLVPSLQGSMS 212
>gi|239742867 PREDICTED: hypothetical protein XP_002342667 [Homo
sapiens]
Length = 221
Score = 28.1 bits (61), Expect = 4.1
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Query: 26 TRRGSGKKRPCVPVHTPVPPRPYLAQKWGQEDLPREAALWLLLHPRRLSGSGGRQVEVLS 85
T RGS RP P V A G E + + LL R + ++L+
Sbjct: 119 TPRGSAPPRPPGPHLRVVAAHLAWAAGGGAEVVVLTLVVPLLHGQRHVHALVCDGEQILA 178
Query: 86 GGPSVWVL-PSLLPCLAWAAGGAVTTGSSVGALS 118
P++ V+ P LPC+ GG + S G++S
Sbjct: 179 AAPALLVVAPHALPCVGLGEGGQLLVPSLQGSMS 212
>gi|116292180 outer dense fiber of sperm tails 3B [Homo sapiens]
Length = 253
Score = 28.1 bits (61), Expect = 4.1
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 7/67 (10%)
Query: 31 GKKRPCVPVHTPVPPRPYLAQKWGQEDLPREAALWLLLHPRRLSGSGGRQVEVLSGGPSV 90
G+ R P TP P R Y ++ G P +A + PR + G Q E S GP+
Sbjct: 91 GRPRRSAPFLTPGPGR-YFPERAGNATYP--SAPRHTIAPR----NWGVQAEQQSPGPAA 143
Query: 91 WVLPSLL 97
+ +PSLL
Sbjct: 144 YTVPSLL 150
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.134 0.455
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,711,681
Number of Sequences: 37866
Number of extensions: 446670
Number of successful extensions: 1418
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 1390
Number of HSP's gapped (non-prelim): 75
length of query: 175
length of database: 18,247,518
effective HSP length: 95
effective length of query: 80
effective length of database: 14,650,248
effective search space: 1172019840
effective search space used: 1172019840
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.