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Search of human proteins with 239741815
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239741815 PREDICTED: hypothetical protein XP_002342320 [Homo
sapiens]
(448 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239753353 PREDICTED: hypothetical protein [Homo sapiens] 887 0.0
gi|239747921 PREDICTED: hypothetical protein XP_002346480 [Homo ... 887 0.0
gi|239741815 PREDICTED: hypothetical protein XP_002342320 [Homo ... 887 0.0
gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens] 46 8e-05
gi|239758013 PREDICTED: hypothetical protein [Homo sapiens] 44 2e-04
gi|169204930 PREDICTED: hypothetical protein [Homo sapiens] 44 4e-04
gi|239750393 PREDICTED: hypothetical protein [Homo sapiens] 44 4e-04
gi|239744694 PREDICTED: hypothetical protein [Homo sapiens] 44 4e-04
gi|239751491 PREDICTED: hypothetical protein XP_002347883 [Homo ... 42 9e-04
gi|239745989 PREDICTED: hypothetical protein XP_002344188 [Homo ... 42 9e-04
gi|182507165 thymus expressed gene 3-like [Homo sapiens] 42 0.001
gi|239754838 PREDICTED: hypothetical protein [Homo sapiens] 42 0.001
gi|169171388 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239749096 PREDICTED: hypothetical protein [Homo sapiens] 41 0.002
gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo ... 41 0.003
gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo ... 41 0.003
gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo ... 41 0.003
gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo ... 40 0.004
gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo ... 40 0.004
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 40 0.004
gi|126352446 elastin isoform d precursor [Homo sapiens] 40 0.006
gi|126352322 elastin isoform c precursor [Homo sapiens] 40 0.006
gi|126352700 elastin isoform b precursor [Homo sapiens] 40 0.006
gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo ... 40 0.006
gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo ... 40 0.006
gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo ... 40 0.006
gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo ... 40 0.006
gi|239743123 PREDICTED: hypothetical protein [Homo sapiens] 40 0.006
gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens] 40 0.006
gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens] 40 0.006
>gi|239753353 PREDICTED: hypothetical protein [Homo sapiens]
Length = 448
Score = 887 bits (2292), Expect = 0.0
Identities = 448/448 (100%), Positives = 448/448 (100%)
Query: 1 MGAPRAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREAS 60
MGAPRAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREAS
Sbjct: 1 MGAPRAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREAS 60
Query: 61 RAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLS 120
RAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLS
Sbjct: 61 RAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLS 120
Query: 121 GSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLP 180
GSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLP
Sbjct: 121 GSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLP 180
Query: 181 PLPGPPPPAIRCGTPKSQEAGAETGGEAQGGEALAPGCCSEGISPLFHIFLNLDRRFWNQ 240
PLPGPPPPAIRCGTPKSQEAGAETGGEAQGGEALAPGCCSEGISPLFHIFLNLDRRFWNQ
Sbjct: 181 PLPGPPPPAIRCGTPKSQEAGAETGGEAQGGEALAPGCCSEGISPLFHIFLNLDRRFWNQ 240
Query: 241 ILTFEEKDLSIRREPHLSLGEAQRGRQLGSLRQGQVLSLLETPLKSRQLETGVDGAGFPD 300
ILTFEEKDLSIRREPHLSLGEAQRGRQLGSLRQGQVLSLLETPLKSRQLETGVDGAGFPD
Sbjct: 241 ILTFEEKDLSIRREPHLSLGEAQRGRQLGSLRQGQVLSLLETPLKSRQLETGVDGAGFPD 300
Query: 301 FLWLPVHYPNFRLKVLLLCNDKESLVVGWGRTGSIGSVGGVGGGVAQVIAALGGVRDVVE 360
FLWLPVHYPNFRLKVLLLCNDKESLVVGWGRTGSIGSVGGVGGGVAQVIAALGGVRDVVE
Sbjct: 301 FLWLPVHYPNFRLKVLLLCNDKESLVVGWGRTGSIGSVGGVGGGVAQVIAALGGVRDVVE 360
Query: 361 AAGLVLVGTHVRVGRAPAAAAARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATR 420
AAGLVLVGTHVRVGRAPAAAAARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATR
Sbjct: 361 AAGLVLVGTHVRVGRAPAAAAARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATR 420
Query: 421 AGAAAARGLLVLVVRAGGGDLGRVHISH 448
AGAAAARGLLVLVVRAGGGDLGRVHISH
Sbjct: 421 AGAAAARGLLVLVVRAGGGDLGRVHISH 448
>gi|239747921 PREDICTED: hypothetical protein XP_002346480 [Homo
sapiens]
Length = 448
Score = 887 bits (2292), Expect = 0.0
Identities = 448/448 (100%), Positives = 448/448 (100%)
Query: 1 MGAPRAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREAS 60
MGAPRAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREAS
Sbjct: 1 MGAPRAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREAS 60
Query: 61 RAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLS 120
RAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLS
Sbjct: 61 RAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLS 120
Query: 121 GSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLP 180
GSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLP
Sbjct: 121 GSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLP 180
Query: 181 PLPGPPPPAIRCGTPKSQEAGAETGGEAQGGEALAPGCCSEGISPLFHIFLNLDRRFWNQ 240
PLPGPPPPAIRCGTPKSQEAGAETGGEAQGGEALAPGCCSEGISPLFHIFLNLDRRFWNQ
Sbjct: 181 PLPGPPPPAIRCGTPKSQEAGAETGGEAQGGEALAPGCCSEGISPLFHIFLNLDRRFWNQ 240
Query: 241 ILTFEEKDLSIRREPHLSLGEAQRGRQLGSLRQGQVLSLLETPLKSRQLETGVDGAGFPD 300
ILTFEEKDLSIRREPHLSLGEAQRGRQLGSLRQGQVLSLLETPLKSRQLETGVDGAGFPD
Sbjct: 241 ILTFEEKDLSIRREPHLSLGEAQRGRQLGSLRQGQVLSLLETPLKSRQLETGVDGAGFPD 300
Query: 301 FLWLPVHYPNFRLKVLLLCNDKESLVVGWGRTGSIGSVGGVGGGVAQVIAALGGVRDVVE 360
FLWLPVHYPNFRLKVLLLCNDKESLVVGWGRTGSIGSVGGVGGGVAQVIAALGGVRDVVE
Sbjct: 301 FLWLPVHYPNFRLKVLLLCNDKESLVVGWGRTGSIGSVGGVGGGVAQVIAALGGVRDVVE 360
Query: 361 AAGLVLVGTHVRVGRAPAAAAARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATR 420
AAGLVLVGTHVRVGRAPAAAAARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATR
Sbjct: 361 AAGLVLVGTHVRVGRAPAAAAARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATR 420
Query: 421 AGAAAARGLLVLVVRAGGGDLGRVHISH 448
AGAAAARGLLVLVVRAGGGDLGRVHISH
Sbjct: 421 AGAAAARGLLVLVVRAGGGDLGRVHISH 448
>gi|239741815 PREDICTED: hypothetical protein XP_002342320 [Homo
sapiens]
Length = 448
Score = 887 bits (2292), Expect = 0.0
Identities = 448/448 (100%), Positives = 448/448 (100%)
Query: 1 MGAPRAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREAS 60
MGAPRAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREAS
Sbjct: 1 MGAPRAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREAS 60
Query: 61 RAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLS 120
RAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLS
Sbjct: 61 RAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLS 120
Query: 121 GSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLP 180
GSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLP
Sbjct: 121 GSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLP 180
Query: 181 PLPGPPPPAIRCGTPKSQEAGAETGGEAQGGEALAPGCCSEGISPLFHIFLNLDRRFWNQ 240
PLPGPPPPAIRCGTPKSQEAGAETGGEAQGGEALAPGCCSEGISPLFHIFLNLDRRFWNQ
Sbjct: 181 PLPGPPPPAIRCGTPKSQEAGAETGGEAQGGEALAPGCCSEGISPLFHIFLNLDRRFWNQ 240
Query: 241 ILTFEEKDLSIRREPHLSLGEAQRGRQLGSLRQGQVLSLLETPLKSRQLETGVDGAGFPD 300
ILTFEEKDLSIRREPHLSLGEAQRGRQLGSLRQGQVLSLLETPLKSRQLETGVDGAGFPD
Sbjct: 241 ILTFEEKDLSIRREPHLSLGEAQRGRQLGSLRQGQVLSLLETPLKSRQLETGVDGAGFPD 300
Query: 301 FLWLPVHYPNFRLKVLLLCNDKESLVVGWGRTGSIGSVGGVGGGVAQVIAALGGVRDVVE 360
FLWLPVHYPNFRLKVLLLCNDKESLVVGWGRTGSIGSVGGVGGGVAQVIAALGGVRDVVE
Sbjct: 301 FLWLPVHYPNFRLKVLLLCNDKESLVVGWGRTGSIGSVGGVGGGVAQVIAALGGVRDVVE 360
Query: 361 AAGLVLVGTHVRVGRAPAAAAARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATR 420
AAGLVLVGTHVRVGRAPAAAAARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATR
Sbjct: 361 AAGLVLVGTHVRVGRAPAAAAARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATR 420
Query: 421 AGAAAARGLLVLVVRAGGGDLGRVHISH 448
AGAAAARGLLVLVVRAGGGDLGRVHISH
Sbjct: 421 AGAAAARGLLVLVVRAGGGDLGRVHISH 448
>gi|4502951 collagen type III alpha 1 preproprotein [Homo sapiens]
Length = 1466
Score = 45.8 bits (107), Expect = 8e-05
Identities = 60/226 (26%), Positives = 75/226 (33%), Gaps = 19/226 (8%)
Query: 2 GAPRAGNCRKERSGGAARVKGPRGG-GRAGGTGRSITAASELSPGERARRKKPQSAREAS 60
G P ER G + GP+G G GG G + G P A +
Sbjct: 720 GTPGLQGMPGERGGLGS--PGPKGDKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPG 777
Query: 61 RAWEASISRDPALSPGRG----RRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFA 116
E P ++ RG R +TG PG G G + +PG + E R A
Sbjct: 778 DKGEGGAPGLPGIAGPRGSPGERGETGPPGPAG--FPGAPGQNGEPGGKGE----RGAPG 831
Query: 117 KLLSGSPERGALSGEFSLGLENRP-----RAHRGAPAAVMVVVVMRLRGLSGVQQRRRGL 171
+ G P G G P + RG+P RGL G
Sbjct: 832 EKGEGGPP-GVAGPPGGSGPAGPPGPQGVKGERGSPGGPGAAGFPGARGLPGPPGSNGNP 890
Query: 172 QPELPAPLPPLPGPPPPAIRCGTPKSQEAGAETGGEAQGGEALAPG 217
P P+ P GPP PA G P S G Q GE +PG
Sbjct: 891 GPPGPSGSPGKDGPPGPAGNTGAPGSPGVSGPKGDAGQPGEKGSPG 936
Score = 39.7 bits (91), Expect = 0.006
Identities = 61/230 (26%), Positives = 71/230 (30%), Gaps = 35/230 (15%)
Query: 16 GAARVKGPRGG-------GRAGGTGRSITAASELSPGERARRKKPQSAREASRAWEASIS 68
GA GPRG G GG G S PG + P S E+ R S
Sbjct: 510 GAPGPAGPRGAAGEPGRDGVPGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPS 569
Query: 69 R---DPAL-----------SPGRGRRQTGSPGGEGRQVRGGARNSRDP-------GLRSE 107
P + +PG+ + G PGG G Q G P G +
Sbjct: 570 GPRGQPGVMGFPGPKGNDGAPGKNGER-GGPGGPGPQGPPGKNGETGPQGPPGPTGPGGD 628
Query: 108 MRPFREAFAKLLSGSPERGALSGEFSLGLENRPRAHRGAPAA------VMVVVVMRLRGL 161
+ L G P G GE E P+ GAP A GL
Sbjct: 629 KGDTGPPGPQGLQGLPGTGGPPGENGKPGEPGPKGDAGAPGAPGGKGDAGAPGERGPPGL 688
Query: 162 SGVQQRRRGLQPELPAPLPPLPGPPPPAIRCGTPKSQEAGAETGGEAQGG 211
+G R G P P GPP P GTP Q E GG G
Sbjct: 689 AGAPGLRGGAGPPGPEGGKGAAGPPGPPGAAGTPGLQGMPGERGGLGSPG 738
Score = 36.6 bits (83), Expect = 0.047
Identities = 60/214 (28%), Positives = 72/214 (33%), Gaps = 25/214 (11%)
Query: 15 GGAARVKGPRGG-GRAGGTGRSITAASELSPGERARRKKPQSAREASRAWEASI--SRDP 71
GG A GP G G G G S S SPG + +P A + P
Sbjct: 167 GGLAGYPGPAGPPGPPGPPGTSGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGP 226
Query: 72 ALSPGRGRR-----QTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLSGSPERG 126
A G R + G PG G ++G A PG++ K +G+P
Sbjct: 227 AGKDGESGRPGRPGERGLPGPPG--IKGPAGIPGFPGMKGHRGFDGRNGEKGETGAP--- 281
Query: 127 ALSGEFSLGLENR---PRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLPPLP 183
L GE L EN P RGAP RG G+ + P
Sbjct: 282 GLKGENGLPGENGAPGPMGPRGAPGE---------RGRPGLPGAAGARGNDGARGSDGQP 332
Query: 184 GPPPPAIRCGTPKSQEAGAETGGEAQGGEALAPG 217
GPP P G P S A E G G APG
Sbjct: 333 GPPGPPGTAGFPGSPGAKGEVGPAGSPGSNGAPG 366
Score = 35.0 bits (79), Expect = 0.14
Identities = 56/226 (24%), Positives = 71/226 (31%), Gaps = 58/226 (25%)
Query: 16 GAARVKGPRG-------GGRAGGTGRSITAASELSPGERARRKKPQSAREASRAWEASIS 68
G +KGP G G G GR+ +PG + P A
Sbjct: 246 GPPGIKGPAGIPGFPGMKGHRGFDGRNGEKGETGAPGLKGENGLPGENG-------APGP 298
Query: 69 RDPALSPGRGRRQTGSPGGEGRQVRGGARNSR----------------DPGLRSEMRPFR 112
P +PG R + G PG G + GAR S PG + E+ P
Sbjct: 299 MGPRGAPGE-RGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGP-- 355
Query: 113 EAFAKLLSGSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQ 172
+GSP G+ E P+ H GA G G+ G
Sbjct: 356 -------AGSPGSNGAPGQRG---EPGPQGHAGAQGPP---------GPPGINGSPGGKG 396
Query: 173 PELPAPLPPLPG------PPPPAIRCGTPKSQEAGAETGGEAQGGE 212
PA +P PG PP PA G P + E G GE
Sbjct: 397 EMGPAGIPGAPGLMGARGPPGPAGANGAPGLRGGAGEPGKNGAKGE 442
Score = 35.0 bits (79), Expect = 0.14
Identities = 67/229 (29%), Positives = 81/229 (35%), Gaps = 28/229 (12%)
Query: 2 GAP-RAGNCRKERSGGAARVKGPRG-GGRAGGTGRSITAASELSPGERARRKKPQSAREA 59
GAP + G + GA GP G G GG G A +PG R P A
Sbjct: 363 GAPGQRGEPGPQGHAGAQGPPGPPGINGSPGGKGEMGPAGIPGAPGLMGARGPPGPAG-- 420
Query: 60 SRAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEM----RPFREAF 115
A A R A PG+ + G PG G RG A PG + E P
Sbjct: 421 --ANGAPGLRGGAGEPGKNGAK-GEPGPRGE--RGEAGIPGVPGAKGEDGKDGSPGEPGA 475
Query: 116 AKLLSGSPERGAL-----SGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRG 170
L + ERGA +G + E P RGAP RG +G + R G
Sbjct: 476 NGLPGAAGERGAPGFRGPAGPNGIPGEKGPAGERGAPGPAGP------RGAAG-EPGRDG 528
Query: 171 LQPELPAP--LPPLPGPPPPAIRCGTPKSQEAGAETGGEAQGGEALAPG 217
+ P P +P PG P + G P SQ G G PG
Sbjct: 529 V-PGGPGMRGMPGSPGGPGSDGKPGPPGSQGESGRPGPPGPSGPRGQPG 576
Score = 33.9 bits (76), Expect = 0.31
Identities = 65/215 (30%), Positives = 73/215 (33%), Gaps = 41/215 (19%)
Query: 2 GAPRA-GNCRKERSGGAARVKGPRG-GGRAGGTGRSITAASELSPGERARRKKPQSAREA 59
GAP A G+ G A G RG G AG G A S +PG + R E
Sbjct: 1041 GAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPAGAPGPAGSRGAPGPQGPRGDKGETGER 1100
Query: 60 SRAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDP-GLRSEMRPFREAFAKL 118
A P +PG GSPG G+Q GA S P G R + P
Sbjct: 1101 GAAGIKGHRGFPG-NPGA----PGSPGPAGQQ---GAIGSPGPAGPRGPVGP-------- 1144
Query: 119 LSGSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAP 178
SG P + SG PR +RG RG G P P P
Sbjct: 1145 -SGPPGKDGTSGHPGPIGPPGPRGNRGE------------RGSEGSPGH-----PGQPGP 1186
Query: 179 LPPLPGPPPPAIRCGTPKSQEAGAETGGEAQGGEA 213
PGPP C A A GGE GG A
Sbjct: 1187 ----PGPPGAPGPCCGGVGAAAIAGIGGEKAGGFA 1217
>gi|239758013 PREDICTED: hypothetical protein [Homo sapiens]
Length = 819
Score = 44.3 bits (103), Expect = 2e-04
Identities = 50/219 (22%), Positives = 84/219 (38%), Gaps = 7/219 (3%)
Query: 4 PRAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREASRAW 63
P AG + R GG K R G +A G+S S ++ RR+ +A ++
Sbjct: 230 PAAGGAKSRRGGGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLRRQGQNAALAGAKRR 289
Query: 64 EASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLSGSP 123
A+ + + + GRG R S GG+ + G + R G ++ A K G
Sbjct: 290 GAATAGEKPAAKGRGGRGPKSLGGQNPRWGRGGKKPRRRGQKATKA--AAAGTKRGGGGQ 347
Query: 124 ERGALSGEFSLGLENR----PRAHRGAPAAVMVVVVMRLRGLSGVQQRRRG-LQPELPAP 178
++ A+ G S + R PR + + A +GL ++R G +P P
Sbjct: 348 QKAAVVGVKSRKKQRRRGKKPRRQKASAAGAKSRGGGDKKGLREAKRRGDGRKKPRWQNP 407
Query: 179 LPPLPGPPPPAIRCGTPKSQEAGAETGGEAQGGEALAPG 217
P R G K +++GG++ + G
Sbjct: 408 RRRAQKAPAAKPRGGGSKKPRRRGPKAAKSRGGKSRSGG 446
Score = 37.4 bits (85), Expect = 0.028
Identities = 54/195 (27%), Positives = 68/195 (34%), Gaps = 41/195 (21%)
Query: 11 KERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREASRAWEASISRD 70
K RSG R +G + G GR A S RRKK + + A A A R
Sbjct: 183 KSRSGKKPRRRGAKSRGDEDKKGRQREAKSRFGKTRGGRRKKHRRPKPA--AGGAKSRRG 240
Query: 71 PALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLSGSPERGALS- 129
P + RR+ G+ G +R D LR R+ L+G+ RGA +
Sbjct: 241 GGKKPQKQRRRGQKAATGGKSRVGKSRGGGDKKLR------RQGQNAALAGAKRRGAATA 294
Query: 130 ------------GEFSLGLENRPRAHRG-------APAAVMVVVVMRLRGLSGVQ----- 165
G SLG +N PR RG A RG G Q
Sbjct: 295 GEKPAAKGRGGRGPKSLGGQN-PRWGRGGKKPRRRGQKATKAAAAGTKRGGGGQQKAAVV 353
Query: 166 -------QRRRGLQP 173
QRRRG +P
Sbjct: 354 GVKSRKKQRRRGKKP 368
Score = 35.8 bits (81), Expect = 0.081
Identities = 28/100 (28%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 1 MGAPRAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREAS 60
+G R G K R G A+ +G GG +G+ AAS+ G A+R++ A+ S
Sbjct: 720 LGKSRGGGGAKSRGSGGAKSRG--SGGAKSRSGKK-AAASKSHGGGGAKRRRGGGAK--S 774
Query: 61 RAWEASIS---RDPALSPGRGRRQTGSPGGEGRQVRGGAR 97
R+ E +++ + A + G+ + S GG G++ G +
Sbjct: 775 RSGEKAVTAGGQKAAAAGGKKPPRVKSRGGRGQKAAAGGK 814
Score = 29.3 bits (64), Expect = 7.6
Identities = 35/127 (27%), Positives = 50/127 (39%), Gaps = 7/127 (5%)
Query: 24 RGGGRAGGTGRSITAASELSPGERARRKKPQSAREASRAWEASISRDPALSPGRGRRQTG 83
+ GRAG G + AA +P E A + A+ + S D L RRQ
Sbjct: 11 QAAGRAG-PGAPLGAALARTPVELAAESAAPALSAAAAGVKILGSGDKKL-----RRQKA 64
Query: 84 SPGGEGRQVRGGARNSRDPGLRSEMRPFREAF-AKLLSGSPERGALSGEFSLGLENRPRA 142
+ GG+ ++RG R + A A+ G ++ A +G SLG R
Sbjct: 65 AAGGKKARLRGQKGAVAGKEARQHWQKAAGAGGAENRGGGEQKAAAAGTKSLGGRGRKPR 124
Query: 143 HRGAPAA 149
RG AA
Sbjct: 125 RRGQKAA 131
>gi|169204930 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 43.5 bits (101), Expect = 4e-04
Identities = 58/215 (26%), Positives = 74/215 (34%), Gaps = 48/215 (22%)
Query: 1 MGAPRAGNCRKERSGGA---------------ARVKGPRGGGRAGGTG-RSITAASELSP 44
+GAPR G GG A ++G GG GG G R + P
Sbjct: 164 LGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPP 223
Query: 45 GERARRKKPQSAREASR-AWEASISRDPALS--------PGRGRRQTGSPGGEGRQVRGG 95
R R ++ + A R A+++R LS RGR S R RGG
Sbjct: 224 SGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGG 283
Query: 96 ARNSRDPGLRSEMRPFREAFAKLLSGSPER--GALSGEFSLGLENRPRAHRGAPAAVMVV 153
AR R R+ R A+L +G+P G G EN GAP +
Sbjct: 284 ARGHRRADGRA-----RGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFS---- 334
Query: 154 VVMRLRGLSGVQQRRRGLQPELPAPLPPLPGPPPP 188
+ L A L PLP PPPP
Sbjct: 335 ------------PHPHASRSTLAAQLLPLPQPPPP 357
>gi|239750393 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 43.5 bits (101), Expect = 4e-04
Identities = 58/215 (26%), Positives = 74/215 (34%), Gaps = 48/215 (22%)
Query: 1 MGAPRAGNCRKERSGGA---------------ARVKGPRGGGRAGGTG-RSITAASELSP 44
+GAPR G GG A ++G GG GG G R + P
Sbjct: 164 LGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPP 223
Query: 45 GERARRKKPQSAREASR-AWEASISRDPALS--------PGRGRRQTGSPGGEGRQVRGG 95
R R ++ + A R A+++R LS RGR S R RGG
Sbjct: 224 SGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGG 283
Query: 96 ARNSRDPGLRSEMRPFREAFAKLLSGSPER--GALSGEFSLGLENRPRAHRGAPAAVMVV 153
AR R R+ R A+L +G+P G G EN GAP +
Sbjct: 284 ARGHRRADGRA-----RGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFS---- 334
Query: 154 VVMRLRGLSGVQQRRRGLQPELPAPLPPLPGPPPP 188
+ L A L PLP PPPP
Sbjct: 335 ------------PHPHASRSTLAAQLLPLPQPPPP 357
>gi|239744694 PREDICTED: hypothetical protein [Homo sapiens]
Length = 373
Score = 43.5 bits (101), Expect = 4e-04
Identities = 58/215 (26%), Positives = 74/215 (34%), Gaps = 48/215 (22%)
Query: 1 MGAPRAGNCRKERSGGA---------------ARVKGPRGGGRAGGTG-RSITAASELSP 44
+GAPR G GG A ++G GG GG G R + P
Sbjct: 164 LGAPRGGAAAPRGWGGQGAERLGVHQPGLPTHAALRGGGGGSEGGGGGARPSPPRARQPP 223
Query: 45 GERARRKKPQSAREASR-AWEASISRDPALS--------PGRGRRQTGSPGGEGRQVRGG 95
R R ++ + A R A+++R LS RGR S R RGG
Sbjct: 224 SGRPRPRRTRLLGSAERHTGRAALARHGQLSRPHAAVRNSSRGRGAATSVSAAARPTRGG 283
Query: 96 ARNSRDPGLRSEMRPFREAFAKLLSGSPER--GALSGEFSLGLENRPRAHRGAPAAVMVV 153
AR R R+ R A+L +G+P G G EN GAP +
Sbjct: 284 ARGHRRADGRA-----RGGCAQLRAGTPSAPGGLQDCRGRQGEENAHPFRSGAPFS---- 334
Query: 154 VVMRLRGLSGVQQRRRGLQPELPAPLPPLPGPPPP 188
+ L A L PLP PPPP
Sbjct: 335 ------------PHPHASRSTLAAQLLPLPQPPPP 357
>gi|239751491 PREDICTED: hypothetical protein XP_002347883 [Homo
sapiens]
Length = 333
Score = 42.4 bits (98), Expect = 9e-04
Identities = 53/184 (28%), Positives = 77/184 (41%), Gaps = 35/184 (19%)
Query: 4 PRAGNCRKERSGGAARVKGPRGGGR--AGGTGRSITAASELSPG-------ERARRKKPQ 54
P G ++RSG +K +GG R G G S AA++L +RAR + P+
Sbjct: 166 PNRGRGEQKRSGQLGDIKRGKGGERNVPAGPGGS-AAANDLRRSRVSAPVWQRARGRGPR 224
Query: 55 SAREASRAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNS-RDPGLRSEMRPFRE 113
AR + R P P R PGG +VRGGAR S R P E+ P E
Sbjct: 225 RARRSGRG--------PRRGPEVWPRSEEGPGGLA-EVRGGARRSGRGPRRGPEVWPRSE 275
Query: 114 AFAKLLSGSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGV----QQRRR 169
+ L + RG G + RG P + V++++ R + G+ Q+ +
Sbjct: 276 EGSGGL--AEVRGGPGGLAEV---------RGGPGGLAEVIIVKPRAMRGLCSVGQEAKS 324
Query: 170 GLQP 173
G P
Sbjct: 325 GTGP 328
>gi|239745989 PREDICTED: hypothetical protein XP_002344188 [Homo
sapiens]
Length = 296
Score = 42.4 bits (98), Expect = 9e-04
Identities = 53/184 (28%), Positives = 77/184 (41%), Gaps = 35/184 (19%)
Query: 4 PRAGNCRKERSGGAARVKGPRGGGR--AGGTGRSITAASELSPG-------ERARRKKPQ 54
P G ++RSG +K +GG R G G S AA++L +RAR + P+
Sbjct: 129 PNRGRGEQKRSGQLGDIKRGKGGERNVPAGPGGS-AAANDLRRSRVSAPVWQRARGRGPR 187
Query: 55 SAREASRAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNS-RDPGLRSEMRPFRE 113
AR + R P P R PGG +VRGGAR S R P E+ P E
Sbjct: 188 RARRSGRG--------PRRGPEVWPRSEEGPGGLA-EVRGGARRSGRGPRRGPEVWPRSE 238
Query: 114 AFAKLLSGSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGV----QQRRR 169
+ L + RG G + RG P + V++++ R + G+ Q+ +
Sbjct: 239 EGSGGL--AEVRGGPGGLAEV---------RGGPGGLAEVIIVKPRAMRGLCSVGQEAKS 287
Query: 170 GLQP 173
G P
Sbjct: 288 GTGP 291
>gi|182507165 thymus expressed gene 3-like [Homo sapiens]
Length = 629
Score = 42.0 bits (97), Expect = 0.001
Identities = 59/209 (28%), Positives = 77/209 (36%), Gaps = 32/209 (15%)
Query: 38 AASELSPGERARRKKPQSAREASRAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGAR 97
AA+ PG ARRK P R R+ E S R+ + GR R + G RG R
Sbjct: 365 AATRGLPGRAARRKPPPLTR--GRSVEQSPPRERPRAAGRRGRMAEASGR-----RGSPR 417
Query: 98 NSRDPGLRSEMRPFREAFAKLLSGSPERGALSGEFSLGLENRPRAHRGAPAAVMVVVV-- 155
+ +SE A A + SG P+ E E RP R PA +
Sbjct: 418 ARKASRSQSETSLLGRASA-VPSGPPKYPTAERE-----EPRPPRPRRGPAPTLAAQAAG 471
Query: 156 --MRLRGLSGVQQR-RRGLQPELPAPLPPLPGPPPPAIR------CGTPKSQEAGAETG- 205
R R + + R ++P PA P PGP P A + C S+ + G
Sbjct: 472 SCRRWRSTAEIDAADGRRVRPRAPAARVPGPGPSPSAPQRRLLYGCAGSDSECSAGRLGP 531
Query: 206 -------GEAQGGEALAPGCCSEGISPLF 227
G GG + SEG SP F
Sbjct: 532 LGRRGPAGGVGGGYGESESSASEGESPAF 560
>gi|239754838 PREDICTED: hypothetical protein [Homo sapiens]
Length = 265
Score = 41.6 bits (96), Expect = 0.001
Identities = 47/155 (30%), Positives = 61/155 (39%), Gaps = 19/155 (12%)
Query: 1 MGAPRAGNCRKERSGGAARVKGPRGGGRAGGTGR--SITAASELSPGERARRKKPQSARE 58
+G R G + +R GG G GGT + TAA+ + G + +P
Sbjct: 104 LGQRRGGGAKGQRGGGGPPNPPAGQGSDTGGTKTPGTTTAAAAAATGSASPEARPLVGSC 163
Query: 59 ASRAWEAS-ISRDPALSPGRGR--RQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFR-EA 114
S + S +S D +L P R RQ GS R G A SR + S P R E
Sbjct: 164 RSPGYGPSLVSADLSLPPRRLAIPRQLGSGSAPSR--IGCASGSRASVVSSLKNPIRKEG 221
Query: 115 FAKLLSGSPERGALSGEFSLGLENRPRAHRGAPAA 149
F L+ GS E GA P H+G P A
Sbjct: 222 FGSLVPGSKEAGA-----------GPPKHKGPPTA 245
>gi|169171388 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 41.2 bits (95), Expect = 0.002
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 8 NCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREASRAWEASI 67
+C + GG G GG AGG GR+ A P R R + + A + + + +
Sbjct: 46 DCDIKGGGGGGGAGGAEGG--AGGAGRARERAESGRPCGRRRHPQAEPAPKEFQG-DGAA 102
Query: 68 SRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLSGSPER 125
+R AL+ G+ +PGGEG + + + R+ SE P R A+ +G PER
Sbjct: 103 ARADALTAGKSAEP--APGGEGGERGEESASERE----SERAPGRGPGARSSAGEPER 154
>gi|239749096 PREDICTED: hypothetical protein [Homo sapiens]
Length = 154
Score = 41.2 bits (95), Expect = 0.002
Identities = 35/118 (29%), Positives = 54/118 (45%), Gaps = 9/118 (7%)
Query: 8 NCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREASRAWEASI 67
+C + GG G GG AGG GR+ A P R R + + A + + + +
Sbjct: 46 DCDIKGGGGGGGAGGAEGG--AGGAGRARERAESGRPCGRRRHPQAEPAPKEFQG-DGAA 102
Query: 68 SRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLSGSPER 125
+R AL+ G+ +PGGEG + + + R+ SE P R A+ +G PER
Sbjct: 103 ARADALTAGKSAEP--APGGEGGERGEESASERE----SERAPGRGPGARSSAGEPER 154
>gi|239754081 PREDICTED: hypothetical protein XP_002345876 [Homo
sapiens]
Length = 355
Score = 40.8 bits (94), Expect = 0.003
Identities = 62/200 (31%), Positives = 78/200 (39%), Gaps = 29/200 (14%)
Query: 19 RVKGPRGGGRAG-GTGRSITAASELSPGERAR---RKKPQSAREASRAWEASISRDPALS 74
R+ R G G G G AA + G AR R+ P R + +R
Sbjct: 153 RLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPL 212
Query: 75 PG-RGRRQTGSPG----GEGRQVRGG----ARNSRDPGL----RSEMRPFREAFAKL-LS 120
PG RGR + G G R +RGG A +R GL RS + R + A+ L
Sbjct: 213 PGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLR 272
Query: 121 GSPERGALSGE------FSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPE 174
P R ALS + +RP +H AA + R GL RR GL P
Sbjct: 273 FPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPG 332
Query: 175 LPAPLPPLPGPPPPAIRCGT 194
PAP P P A+R GT
Sbjct: 333 -PAPYPLTPA----ALRPGT 347
>gi|239748667 PREDICTED: hypothetical protein XP_002346761 [Homo
sapiens]
Length = 355
Score = 40.8 bits (94), Expect = 0.003
Identities = 62/200 (31%), Positives = 78/200 (39%), Gaps = 29/200 (14%)
Query: 19 RVKGPRGGGRAG-GTGRSITAASELSPGERAR---RKKPQSAREASRAWEASISRDPALS 74
R+ R G G G G AA + G AR R+ P R + +R
Sbjct: 153 RLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPL 212
Query: 75 PG-RGRRQTGSPG----GEGRQVRGG----ARNSRDPGL----RSEMRPFREAFAKL-LS 120
PG RGR + G G R +RGG A +R GL RS + R + A+ L
Sbjct: 213 PGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLR 272
Query: 121 GSPERGALSGE------FSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPE 174
P R ALS + +RP +H AA + R GL RR GL P
Sbjct: 273 FPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPG 332
Query: 175 LPAPLPPLPGPPPPAIRCGT 194
PAP P P A+R GT
Sbjct: 333 -PAPYPLTPA----ALRPGT 347
>gi|239742692 PREDICTED: hypothetical protein XP_002342583 [Homo
sapiens]
Length = 355
Score = 40.8 bits (94), Expect = 0.003
Identities = 62/200 (31%), Positives = 78/200 (39%), Gaps = 29/200 (14%)
Query: 19 RVKGPRGGGRAG-GTGRSITAASELSPGERAR---RKKPQSAREASRAWEASISRDPALS 74
R+ R G G G G AA + G AR R+ P R + +R
Sbjct: 153 RLPSQRRGASCGLGPGPESRAARQGLGGRSARARTRRGPHRTRRPEPGPHHTGARQAGPL 212
Query: 75 PG-RGRRQTGSPG----GEGRQVRGG----ARNSRDPGL----RSEMRPFREAFAKL-LS 120
PG RGR + G G R +RGG A +R GL RS + R + A+ L
Sbjct: 213 PGTRGRTRAAGTGSAARGPARHLRGGSVAAAAAARCLGLSPPGRSRLFSPRSSLARPPLR 272
Query: 121 GSPERGALSGE------FSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPE 174
P R ALS + +RP +H AA + R GL RR GL P
Sbjct: 273 FPPARPALSPSARRRCRVNWNQSSRPASHNAQRAARHIPSRPRASGLRARAARRPGLDPG 332
Query: 175 LPAPLPPLPGPPPPAIRCGT 194
PAP P P A+R GT
Sbjct: 333 -PAPYPLTPA----ALRPGT 347
>gi|239749695 PREDICTED: hypothetical protein XP_002347121 [Homo
sapiens]
Length = 594
Score = 40.0 bits (92), Expect = 0.004
Identities = 57/213 (26%), Positives = 78/213 (36%), Gaps = 25/213 (11%)
Query: 5 RAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSP-GERARRKKPQSAREASRAW 63
R G R AA+++ G RA GR + P + ARR+ P +A A A
Sbjct: 381 REGEARARLGQAAAQMRREGWGARAKLGGRGVCGKCGPGPWDDPARRRNPGAAARAKLAG 440
Query: 64 EASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDP----GLRSEMRPFREAFAKLL 119
+ + G R G G GR GG R +P G + RP R +L
Sbjct: 441 QRAGRARARTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELP 500
Query: 120 SGSPER------GALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQP 173
+ P R A + LG R GAP + L G + R L P
Sbjct: 501 AVDPARDTRREPDAAAQRTELG--GRVGKGPGAPPS----------ALPGPRPRPDSLSP 548
Query: 174 ELPAPLPPLPGPPPPAIRCGTPKSQEAGAETGG 206
P P PP P PP A+ ++ + + GG
Sbjct: 549 GEP-PGPPTP-PPARALPAAVASARCSLRDPGG 579
>gi|239743961 PREDICTED: hypothetical protein XP_002344246 [Homo
sapiens]
Length = 594
Score = 40.0 bits (92), Expect = 0.004
Identities = 57/213 (26%), Positives = 78/213 (36%), Gaps = 25/213 (11%)
Query: 5 RAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSP-GERARRKKPQSAREASRAW 63
R G R AA+++ G RA GR + P + ARR+ P +A A A
Sbjct: 381 REGEARARLGQAAAQMRREGWGARAKLGGRGVCGKCGPGPWDDPARRRNPGAAARAKLAG 440
Query: 64 EASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDP----GLRSEMRPFREAFAKLL 119
+ + G R G G GR GG R +P G + RP R +L
Sbjct: 441 QRAGRARARTGSQVGSRGRGWGPGAGRVPSGGRRGVGNPERWGGEAAAPRPSRVLLPELP 500
Query: 120 SGSPER------GALSGEFSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQP 173
+ P R A + LG R GAP + L G + R L P
Sbjct: 501 AVDPARDTRREPDAAAQRTELG--GRVGKGPGAPPS----------ALPGPRPRPDSLSP 548
Query: 174 ELPAPLPPLPGPPPPAIRCGTPKSQEAGAETGG 206
P P PP P PP A+ ++ + + GG
Sbjct: 549 GEP-PGPPTP-PPARALPAAVASARCSLRDPGG 579
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 40.0 bits (92), Expect = 0.004
Identities = 39/129 (30%), Positives = 53/129 (41%), Gaps = 15/129 (11%)
Query: 4 PRAGNCRKERSGGAARVKGPRGGGRAGGTGRSITAASELSP--GERARR-----KKPQSA 56
P+ G R+ A R R + + S T++S S R+RR + + A
Sbjct: 360 PQPGGPAPGRNASARR----RSSSSSSSSSASRTSSSRSSSRSSSRSRRGGGYYRSGRHA 415
Query: 57 REASRAWEASISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFA 116
R SR+W S SR S R R + S GG R G R SR P R P R + +
Sbjct: 416 RSRSRSWSRSRSRSRRYSRSRSRGRRHSGGGS----RDGHRYSRSPARRGGYGPRRRSRS 471
Query: 117 KLLSGSPER 125
+ SG R
Sbjct: 472 RSHSGDRYR 480
Score = 28.9 bits (63), Expect = 9.9
Identities = 29/107 (27%), Positives = 45/107 (42%), Gaps = 9/107 (8%)
Query: 11 KERSGGAARV--KGPRGGGRAGGTGRSITAASELSPGERARR----KKPQSAREASRAWE 64
+ SGG +R + R R GG G + S G+R RR + S+ + +W
Sbjct: 440 RRHSGGGSRDGHRYSRSPARRGGYGPRRRSRSRSHSGDRYRRGGRGLRHHSSSRSRSSWS 499
Query: 65 ASISRDPALSPGRGRRQTGSPGGEGRQVRGGARN-SRDPGLRSEMRP 110
S SR +L+ R R + SP + R +++ S P RP
Sbjct: 500 LSPSRSRSLT--RSRSHSPSPSQSRSRSRSRSQSPSPSPAREKLTRP 544
>gi|126352446 elastin isoform d precursor [Homo sapiens]
Length = 711
Score = 39.7 bits (91), Expect = 0.006
Identities = 37/106 (34%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 342 GGGVAQVIAALGGVRDVVEAAGLVLVGTHVRVGRAPAAAAARRVLLVGVVA----AVGGG 397
G V V+ LG + V G+V G A AAA A + LVG VGG
Sbjct: 601 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 660
Query: 398 GHRKGGRLLGLVEAAAAAAVATRAGAAAARGLLVLVVRAGGGDLGR 443
G G L G+ AAAA A + G AA G + + GG LG+
Sbjct: 661 GVPGVGGLGGI--PPAAAAKAAKYGVAARPGFGLSPIFPGGACLGK 704
Score = 35.8 bits (81), Expect = 0.081
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 337 SVGGVGGGVAQVIAALGGVRDVVEAAGLVLVGTHVRV---GRAPAAAAARRVLLVG--VV 391
+ G+G G+ + +G V + AG+ +G V G P A AA + G V
Sbjct: 547 AAAGLGAGIPGLGVGVG-VPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP 605
Query: 392 AAVGGGGHRKGGRLLGLVEAAAAAAVATRAGAAAARGLLVLVVRAGGGDLG 442
+GG G G + G V A AA A A AAA LV AG G LG
Sbjct: 606 GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLG 656
Score = 31.2 bits (69), Expect = 2.0
Identities = 43/128 (33%), Positives = 49/128 (38%), Gaps = 16/128 (12%)
Query: 328 GWGRTGSIGSVGGVGG----GVAQVIAALGGVRDVVEAAGLVLVGTHVRVGRA-----PA 378
G G +G GVG GVA I GGV ++A V +R P
Sbjct: 499 GVGLAPGVGVAPGVGVAPGVGVAPGIGP-GGVAAAAKSAAKVAAKAQLRAAAGLGAGIPG 557
Query: 379 AAAARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATRAGAAAARGLLVLVVRAGG 438
V +GV A V G G G G V A AAA A + GAA V V G
Sbjct: 558 LGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAA------VPGVLGGL 611
Query: 439 GDLGRVHI 446
G LG V I
Sbjct: 612 GALGGVGI 619
Score = 29.3 bits (64), Expect = 7.6
Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 354 GVRDVVEAAGLVLVGTHVRVGRAPAAAAARRVLL------VGVVAAVGGGG-HRKGGRLL 406
G V AAG T VG AAAAA + GV+ VGG G G +
Sbjct: 236 GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIP 295
Query: 407 GL---------VEAAAAAAVATRAGAAAARGLL 430
G+ AAAAAA A A AA GL+
Sbjct: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLV 328
Score = 29.3 bits (64), Expect = 7.6
Identities = 28/88 (31%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Query: 339 GGVGGGVAQVIAALG-GVRDVVEAAGLVLVGTHVRVGRAPAAAAARRVLLVGVVAAVGGG 397
GGV G + G GV AA G A + GV A+ G
Sbjct: 238 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
Query: 398 GHRKGGRLLGLVEAAAAAAVATRAGAAA 425
G G AAAAAA A + GAAA
Sbjct: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAA 325
>gi|126352322 elastin isoform c precursor [Homo sapiens]
Length = 692
Score = 39.7 bits (91), Expect = 0.006
Identities = 37/106 (34%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 342 GGGVAQVIAALGGVRDVVEAAGLVLVGTHVRVGRAPAAAAARRVLLVGVVA----AVGGG 397
G V V+ LG + V G+V G A AAA A + LVG VGG
Sbjct: 582 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 641
Query: 398 GHRKGGRLLGLVEAAAAAAVATRAGAAAARGLLVLVVRAGGGDLGR 443
G G L G+ AAAA A + G AA G + + GG LG+
Sbjct: 642 GVPGVGGLGGI--PPAAAAKAAKYGVAARPGFGLSPIFPGGACLGK 685
Score = 35.8 bits (81), Expect = 0.081
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 337 SVGGVGGGVAQVIAALGGVRDVVEAAGLVLVGTHVRV---GRAPAAAAARRVLLVG--VV 391
+ G+G G+ + +G V + AG+ +G V G P A AA + G V
Sbjct: 528 AAAGLGAGIPGLGVGVG-VPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP 586
Query: 392 AAVGGGGHRKGGRLLGLVEAAAAAAVATRAGAAAARGLLVLVVRAGGGDLG 442
+GG G G + G V A AA A A AAA LV AG G LG
Sbjct: 587 GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLG 637
Score = 31.2 bits (69), Expect = 2.0
Identities = 43/128 (33%), Positives = 49/128 (38%), Gaps = 16/128 (12%)
Query: 328 GWGRTGSIGSVGGVGG----GVAQVIAALGGVRDVVEAAGLVLVGTHVRVGRA-----PA 378
G G +G GVG GVA I GGV ++A V +R P
Sbjct: 480 GVGLAPGVGVAPGVGVAPGVGVAPGIGP-GGVAAAAKSAAKVAAKAQLRAAAGLGAGIPG 538
Query: 379 AAAARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATRAGAAAARGLLVLVVRAGG 438
V +GV A V G G G G V A AAA A + GAA V V G
Sbjct: 539 LGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAA------VPGVLGGL 592
Query: 439 GDLGRVHI 446
G LG V I
Sbjct: 593 GALGGVGI 600
Score = 29.3 bits (64), Expect = 7.6
Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 354 GVRDVVEAAGLVLVGTHVRVGRAPAAAAARRVLL------VGVVAAVGGGG-HRKGGRLL 406
G V AAG T VG AAAAA + GV+ VGG G G +
Sbjct: 236 GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIP 295
Query: 407 GL---------VEAAAAAAVATRAGAAAARGLL 430
G+ AAAAAA A A AA GL+
Sbjct: 296 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLV 328
Score = 29.3 bits (64), Expect = 7.6
Identities = 28/88 (31%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Query: 339 GGVGGGVAQVIAALG-GVRDVVEAAGLVLVGTHVRVGRAPAAAAARRVLLVGVVAAVGGG 397
GGV G + G GV AA G A + GV A+ G
Sbjct: 238 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 297
Query: 398 GHRKGGRLLGLVEAAAAAAVATRAGAAA 425
G G AAAAAA A + GAAA
Sbjct: 298 GGIAGVGTPAAAAAAAAAAKAAKYGAAA 325
>gi|126352700 elastin isoform b precursor [Homo sapiens]
Length = 677
Score = 39.7 bits (91), Expect = 0.006
Identities = 37/106 (34%), Positives = 46/106 (43%), Gaps = 6/106 (5%)
Query: 342 GGGVAQVIAALGGVRDVVEAAGLVLVGTHVRVGRAPAAAAARRVLLVGVVA----AVGGG 397
G V V+ LG + V G+V G A AAA A + LVG VGG
Sbjct: 567 GAAVPGVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLGVGGL 626
Query: 398 GHRKGGRLLGLVEAAAAAAVATRAGAAAARGLLVLVVRAGGGDLGR 443
G G L G+ AAAA A + G AA G + + GG LG+
Sbjct: 627 GVPGVGGLGGI--PPAAAAKAAKYGVAARPGFGLSPIFPGGACLGK 670
Score = 35.8 bits (81), Expect = 0.081
Identities = 37/111 (33%), Positives = 48/111 (43%), Gaps = 6/111 (5%)
Query: 337 SVGGVGGGVAQVIAALGGVRDVVEAAGLVLVGTHVRV---GRAPAAAAARRVLLVG--VV 391
+ G+G G+ + +G V + AG+ +G V G P A AA + G V
Sbjct: 513 AAAGLGAGIPGLGVGVG-VPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAAVP 571
Query: 392 AAVGGGGHRKGGRLLGLVEAAAAAAVATRAGAAAARGLLVLVVRAGGGDLG 442
+GG G G + G V A AA A A AAA LV AG G LG
Sbjct: 572 GVLGGLGALGGVGIPGGVVGAGPAAAAAAAKAAAKAAQFGLVGAAGLGGLG 622
Score = 31.2 bits (69), Expect = 2.0
Identities = 43/128 (33%), Positives = 49/128 (38%), Gaps = 16/128 (12%)
Query: 328 GWGRTGSIGSVGGVGG----GVAQVIAALGGVRDVVEAAGLVLVGTHVRVGRA-----PA 378
G G +G GVG GVA I GGV ++A V +R P
Sbjct: 465 GVGLAPGVGVAPGVGVAPGVGVAPGIGP-GGVAAAAKSAAKVAAKAQLRAAAGLGAGIPG 523
Query: 379 AAAARRVLLVGVVAAVGGGGHRKGGRLLGLVEAAAAAAVATRAGAAAARGLLVLVVRAGG 438
V +GV A V G G G G V A AAA A + GAA V V G
Sbjct: 524 LGVGVGVPGLGVGAGVPGLGVGAGVPGFGAVPGALAAAKAAKYGAA------VPGVLGGL 577
Query: 439 GDLGRVHI 446
G LG V I
Sbjct: 578 GALGGVGI 585
Score = 29.3 bits (64), Expect = 7.6
Identities = 33/93 (35%), Positives = 38/93 (40%), Gaps = 16/93 (17%)
Query: 354 GVRDVVEAAGLVLVGTHVRVGRAPAAAAARRVLL------VGVVAAVGGGG-HRKGGRLL 406
G V AAG T VG AAAAA + GV+ VGG G G +
Sbjct: 221 GPGGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIP 280
Query: 407 GL---------VEAAAAAAVATRAGAAAARGLL 430
G+ AAAAAA A A AA GL+
Sbjct: 281 GIGGIAGVGTPAAAAAAAAAAKAAKYGAAAGLV 313
Score = 29.3 bits (64), Expect = 7.6
Identities = 28/88 (31%), Positives = 32/88 (36%), Gaps = 1/88 (1%)
Query: 339 GGVGGGVAQVIAALG-GVRDVVEAAGLVLVGTHVRVGRAPAAAAARRVLLVGVVAAVGGG 397
GGV G + G GV AA G A + GV A+ G
Sbjct: 223 GGVAGAAGKAGYPTGTGVGPQAAAAAAAKAAAKFGAGAAGVLPGVGGAGVPGVPGAIPGI 282
Query: 398 GHRKGGRLLGLVEAAAAAAVATRAGAAA 425
G G AAAAAA A + GAAA
Sbjct: 283 GGIAGVGTPAAAAAAAAAAKAAKYGAAA 310
>gi|239749538 PREDICTED: hypothetical protein XP_002347080 [Homo
sapiens]
Length = 400
Score = 39.7 bits (91), Expect = 0.006
Identities = 60/203 (29%), Positives = 70/203 (34%), Gaps = 35/203 (17%)
Query: 40 SELSPGERARRKKPQ-------SAREASRAWEASISRDPALSPGRGRRQTGSPGGEGRQV 92
+ LSP R ++ P+ SA A+R A +P GS GG R +
Sbjct: 79 ASLSPAGRGAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWL 138
Query: 93 RG-------GARNSRDPG----LRSEMRPFREAFA--KLLSGSPERGAL----SGEFSLG 135
+G G + P L RPF A A K G E L G G
Sbjct: 139 QGLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKGAEGGGEKG 198
Query: 136 LENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLPPLPGPPPPAIRCG-T 194
N A G PA LR RRR L+ P P LP P P IRC
Sbjct: 199 NRNMAAAPLGDPAREAAQAQTGLR-------RRRPLEL---VPRPALPSAPSPRIRCFLA 248
Query: 195 PKSQEAGAETGGEAQGGEALAPG 217
P GA E GEA A G
Sbjct: 249 PGRSRVGAALTEEQAAGEAAARG 271
>gi|239749293 PREDICTED: hypothetical protein XP_002346984 [Homo
sapiens]
Length = 585
Score = 39.7 bits (91), Expect = 0.006
Identities = 53/200 (26%), Positives = 74/200 (37%), Gaps = 42/200 (21%)
Query: 36 ITAASELSPGERARRKKPQSAREASRA-----------WEASISRDPALSPGRGRRQTGS 84
++ A SPG R + P++AR +R W ++ P L R+ S
Sbjct: 330 VSQAGPPSPGHAGRPRGPEAARPCARGPPSQEPGPPRPWPCALRPRPRLRAALPSRRLFS 389
Query: 85 PGGEGRQVRGGARN-----SRDPGLRSEMRPFREAFAKLLSGSPERGALSGEFSLGLENR 139
RG A+ PG +RPF+E ++ PE L + +G +
Sbjct: 390 --------RGAAQQLPCCYKLHPGRHVPLRPFKEKHSEARRRLPEPRQLHLQ-PVGANSV 440
Query: 140 PRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLPPLPGPPPPAIRCGTPKSQE 199
RA R R R RRG + E P P P L PP A G+ +Q
Sbjct: 441 ERAAR------------RRRTRPEPGPARRGARAEPPGP-PTLQDPP--ASHLGSSPAQA 485
Query: 200 AGAETGGEAQGGE--ALAPG 217
E G A GG A +PG
Sbjct: 486 PSGEAGRRAGGGAVGARSPG 505
>gi|239743688 PREDICTED: hypothetical protein XP_002342946 [Homo
sapiens]
Length = 400
Score = 39.7 bits (91), Expect = 0.006
Identities = 60/203 (29%), Positives = 70/203 (34%), Gaps = 35/203 (17%)
Query: 40 SELSPGERARRKKPQ-------SAREASRAWEASISRDPALSPGRGRRQTGSPGGEGRQV 92
+ LSP R ++ P+ SA A+R A +P GS GG R +
Sbjct: 79 ASLSPAGRGAQRPPERFLPSSVSAGSAARTLRRGSEARKAQTPRPAGVAQGSGGGGERWL 138
Query: 93 RG-------GARNSRDPG----LRSEMRPFREAFA--KLLSGSPERGAL----SGEFSLG 135
+G G + P L RPF A A K G E L G G
Sbjct: 139 QGLGPPRGRGLSTAPPPSSLRLLPPTPRPFPPAPAGGKGEGGGKESAVLWKGAEGGGEKG 198
Query: 136 LENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLPPLPGPPPPAIRCG-T 194
N A G PA LR RRR L+ P P LP P P IRC
Sbjct: 199 NRNMAAAPLGDPAREAAQAQTGLR-------RRRPLEL---VPRPALPSAPSPRIRCFLA 248
Query: 195 PKSQEAGAETGGEAQGGEALAPG 217
P GA E GEA A G
Sbjct: 249 PGRSRVGAALTEEQAAGEAAARG 271
>gi|239743383 PREDICTED: hypothetical protein XP_002342846 [Homo
sapiens]
Length = 585
Score = 39.7 bits (91), Expect = 0.006
Identities = 53/200 (26%), Positives = 74/200 (37%), Gaps = 42/200 (21%)
Query: 36 ITAASELSPGERARRKKPQSAREASRA-----------WEASISRDPALSPGRGRRQTGS 84
++ A SPG R + P++AR +R W ++ P L R+ S
Sbjct: 330 VSQAGPPSPGHAGRPRGPEAARPCARGPPSQEPGPPRPWPCALRPRPRLRAALPSRRLFS 389
Query: 85 PGGEGRQVRGGARN-----SRDPGLRSEMRPFREAFAKLLSGSPERGALSGEFSLGLENR 139
RG A+ PG +RPF+E ++ PE L + +G +
Sbjct: 390 --------RGAAQQLPCCYKLHPGRHVPLRPFKEKHSEARRRLPEPRQLHLQ-PVGANSV 440
Query: 140 PRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLPPLPGPPPPAIRCGTPKSQE 199
RA R R R RRG + E P P P L PP A G+ +Q
Sbjct: 441 ERAAR------------RRRTRPEPGPARRGARAEPPGP-PTLQDPP--ASHLGSSPAQA 485
Query: 200 AGAETGGEAQGGE--ALAPG 217
E G A GG A +PG
Sbjct: 486 PSGEAGRRAGGGAVGARSPG 505
>gi|239743123 PREDICTED: hypothetical protein [Homo sapiens]
Length = 123
Score = 39.7 bits (91), Expect = 0.006
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 9/111 (8%)
Query: 15 GGAARVKGPRGGGRAGGTGRSITAASELSPGERARRKKPQSAREASRAWEASISRDPALS 74
GG G GG AGG GR+ A P R R + + A + + + + +R AL+
Sbjct: 22 GGGGGAGGAEGG--AGGAGRARERAESGRPCGRRRHPQAEPAPKEFQG-DGAAARADALT 78
Query: 75 PGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLSGSPER 125
G+ +PGGEG + + + R+ SE P R A+ +G PER
Sbjct: 79 AGKSAEP--APGGEGGERGEESASERE----SERAPGRGPGARSSAGEPER 123
>gi|62422554 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 39.7 bits (91), Expect = 0.006
Identities = 57/199 (28%), Positives = 76/199 (38%), Gaps = 29/199 (14%)
Query: 4 PRAGNCRKERSGGAARVKGPRGG-GRAGGTGRSITAASELSPGERARR-----KKPQSAR 57
P R+E RGG G+AG GR SE G RR K+P+S+R
Sbjct: 106 PPPARARQENGMPEEPATTARGGPGKAGSRGR-FAGHSEAGGGSGDRRRAGPEKRPKSSR 164
Query: 58 EASRA-WEASISRDPALSPGRGRRQTGSPGG--EGRQVRGGARNSRDPGLRSEMRPFREA 114
E S E+S + P P G T P G G ++ G + P ++ P R A
Sbjct: 165 EGSGGPQESSRDKRPLSGPDVG---TPQPAGLASGAKLAAGRPFNTYPRADTD-HPSRGA 220
Query: 115 FAK---LLSGSPERGALSGEFSLGLENRPRAH-RGAPAAVMVVVVMRLRGLSGVQQRRRG 170
+ + P G L+ S +RP RGAP+ G+ G
Sbjct: 221 QGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSP----------GVLGPHASEPQ 270
Query: 171 LQPELPAP-LPPLPGPPPP 188
L P P P +PGPP P
Sbjct: 271 LAPPACTPAAPAVPGPPGP 289
Score = 30.0 bits (66), Expect = 4.4
Identities = 40/147 (27%), Positives = 51/147 (34%), Gaps = 44/147 (29%)
Query: 66 SISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLSGSPER 125
S+ RD P R R++ G P RGG PG F +G E
Sbjct: 99 SLRRDSPPPPARARQENGMPEEPATTARGG------PGKAGSRGRF--------AGHSEA 144
Query: 126 GALSGE-FSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLPPLPG 184
G SG+ G E RP++ R G G Q+ R + PL G
Sbjct: 145 GGGSGDRRRAGPEKRPKSSR--------------EGSGGPQESSRDKR--------PLSG 182
Query: 185 PPPPAIRCGTPKSQEAGAETGGEAQGG 211
P GTP Q AG +G + G
Sbjct: 183 PD-----VGTP--QPAGLASGAKLAAG 202
>gi|62422557 p21-activated kinase 4 isoform 1 [Homo sapiens]
Length = 591
Score = 39.7 bits (91), Expect = 0.006
Identities = 57/199 (28%), Positives = 76/199 (38%), Gaps = 29/199 (14%)
Query: 4 PRAGNCRKERSGGAARVKGPRGG-GRAGGTGRSITAASELSPGERARR-----KKPQSAR 57
P R+E RGG G+AG GR SE G RR K+P+S+R
Sbjct: 106 PPPARARQENGMPEEPATTARGGPGKAGSRGR-FAGHSEAGGGSGDRRRAGPEKRPKSSR 164
Query: 58 EASRA-WEASISRDPALSPGRGRRQTGSPGG--EGRQVRGGARNSRDPGLRSEMRPFREA 114
E S E+S + P P G T P G G ++ G + P ++ P R A
Sbjct: 165 EGSGGPQESSRDKRPLSGPDVG---TPQPAGLASGAKLAAGRPFNTYPRADTD-HPSRGA 220
Query: 115 FAK---LLSGSPERGALSGEFSLGLENRPRAH-RGAPAAVMVVVVMRLRGLSGVQQRRRG 170
+ + P G L+ S +RP RGAP+ G+ G
Sbjct: 221 QGEPHDVAPNGPSAGGLAIPQSSSSSSRPPTRARGAPSP----------GVLGPHASEPQ 270
Query: 171 LQPELPAP-LPPLPGPPPP 188
L P P P +PGPP P
Sbjct: 271 LAPPACTPAAPAVPGPPGP 289
Score = 30.0 bits (66), Expect = 4.4
Identities = 40/147 (27%), Positives = 51/147 (34%), Gaps = 44/147 (29%)
Query: 66 SISRDPALSPGRGRRQTGSPGGEGRQVRGGARNSRDPGLRSEMRPFREAFAKLLSGSPER 125
S+ RD P R R++ G P RGG PG F +G E
Sbjct: 99 SLRRDSPPPPARARQENGMPEEPATTARGG------PGKAGSRGRF--------AGHSEA 144
Query: 126 GALSGE-FSLGLENRPRAHRGAPAAVMVVVVMRLRGLSGVQQRRRGLQPELPAPLPPLPG 184
G SG+ G E RP++ R G G Q+ R + PL G
Sbjct: 145 GGGSGDRRRAGPEKRPKSSR--------------EGSGGPQESSRDKR--------PLSG 182
Query: 185 PPPPAIRCGTPKSQEAGAETGGEAQGG 211
P GTP Q AG +G + G
Sbjct: 183 PD-----VGTP--QPAGLASGAKLAAG 202
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.138 0.410
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 20,254,280
Number of Sequences: 37866
Number of extensions: 1194195
Number of successful extensions: 14733
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 157
Number of HSP's successfully gapped in prelim test: 559
Number of HSP's that attempted gapping in prelim test: 11609
Number of HSP's gapped (non-prelim): 3061
length of query: 448
length of database: 18,247,518
effective HSP length: 106
effective length of query: 342
effective length of database: 14,233,722
effective search space: 4867932924
effective search space used: 4867932924
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.