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Search of human proteins with 23957692
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|23957692 myocardin isoform 2 [Homo sapiens]
(938 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|23957692 myocardin isoform 2 [Homo sapiens] 1867 0.0
gi|226423889 myocardin isoform 1 [Homo sapiens] 1844 0.0
gi|226423891 myocardin isoform 3 [Homo sapiens] 1242 0.0
gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens] 506 e-143
gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens] 449 e-126
gi|195963410 MEF2 activating motif and SAP domain containing tra... 63 1e-09
gi|32698970 MEF2 activating motif and SAP domain containing tran... 57 1e-07
gi|50345997 E1A binding protein p300 [Homo sapiens] 52 3e-06
gi|148368962 NKF3 kinase family member [Homo sapiens] 50 1e-05
gi|32307128 nuclear receptor coactivator 6 [Homo sapiens] 47 6e-05
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 45 3e-04
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 44 0.001
gi|169166499 PREDICTED: similar to ribonucleic acid binding prot... 44 0.001
gi|113415498 PREDICTED: similar to ribonucleic acid binding prot... 44 0.001
gi|88973230 PREDICTED: similar to ribonucleic acid binding prote... 44 0.001
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot... 43 0.001
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot... 43 0.001
gi|7661990 mastermind-like 1 [Homo sapiens] 43 0.001
gi|157743257 POU domain, class 6, transcription factor 2 [Homo s... 43 0.001
gi|6857826 RNA-binding protein S1, serine-rich domain [Homo sapi... 43 0.001
gi|18379334 RNA-binding protein S1, serine-rich domain [Homo sap... 43 0.001
gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo ... 43 0.002
gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo ... 43 0.002
gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo ... 43 0.002
gi|239754668 PREDICTED: mucin 12 [Homo sapiens] 42 0.003
gi|239743293 PREDICTED: mucin 12 [Homo sapiens] 42 0.004
gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens] 41 0.005
gi|22035604 mitogen-activated protein kinase kinase kinase kinas... 41 0.005
gi|124430752 kinesin family member 26B [Homo sapiens] 41 0.006
gi|91982772 mucin 17 [Homo sapiens] 40 0.008
>gi|23957692 myocardin isoform 2 [Homo sapiens]
Length = 938
Score = 1867 bits (4835), Expect = 0.0
Identities = 938/938 (100%), Positives = 938/938 (100%)
Query: 1 MTLLGSEHSLLIRSKFRSVLQLRLQQRRTQEQLANQGIIPPLKRPAEFHEQRKHLDSDKA 60
MTLLGSEHSLLIRSKFRSVLQLRLQQRRTQEQLANQGIIPPLKRPAEFHEQRKHLDSDKA
Sbjct: 1 MTLLGSEHSLLIRSKFRSVLQLRLQQRRTQEQLANQGIIPPLKRPAEFHEQRKHLDSDKA 60
Query: 61 KNSLKRKARNRCNSADLVNMHILQASTAERSIPTAQMKLKRARLADDLNEKIALRPGPLE 120
KNSLKRKARNRCNSADLVNMHILQASTAERSIPTAQMKLKRARLADDLNEKIALRPGPLE
Sbjct: 61 KNSLKRKARNRCNSADLVNMHILQASTAERSIPTAQMKLKRARLADDLNEKIALRPGPLE 120
Query: 121 LVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAGSPP 180
LVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAGSPP
Sbjct: 121 LVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAGSPP 180
Query: 181 DAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVHAAVKS 240
DAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVHAAVKS
Sbjct: 181 DAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVHAAVKS 240
Query: 241 KSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQ 300
KSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQ
Sbjct: 241 KSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQ 300
Query: 301 ILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVS 360
ILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVS
Sbjct: 301 ILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVS 360
Query: 361 SFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDITT 420
SFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDITT
Sbjct: 361 SFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDITT 420
Query: 421 VTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASP 480
VTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASP
Sbjct: 421 VTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASP 480
Query: 481 SFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQR 540
SFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQR
Sbjct: 481 SFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQR 540
Query: 541 QVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPA 600
QVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPA
Sbjct: 541 QVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPA 600
Query: 601 CEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHF 660
CEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHF
Sbjct: 601 CEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHF 660
Query: 661 LPSSSGAQGEGHRVSSPISSQVCTAQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQP 720
LPSSSGAQGEGHRVSSPISSQVCTAQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQP
Sbjct: 661 LPSSSGAQGEGHRVSSPISSQVCTAQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQP 720
Query: 721 PSYEDAVKQQMTRSQQMDELLDVLIESGEMPADAREDHSCLQKVPKIPRSSRSPTAVLTK 780
PSYEDAVKQQMTRSQQMDELLDVLIESGEMPADAREDHSCLQKVPKIPRSSRSPTAVLTK
Sbjct: 721 PSYEDAVKQQMTRSQQMDELLDVLIESGEMPADAREDHSCLQKVPKIPRSSRSPTAVLTK 780
Query: 781 PSASFEQASSGSQIPFDPYATDSDEHLEVLLNSQSPLGKMSDVTLLKIGSEEPHFDGIMD 840
PSASFEQASSGSQIPFDPYATDSDEHLEVLLNSQSPLGKMSDVTLLKIGSEEPHFDGIMD
Sbjct: 781 PSASFEQASSGSQIPFDPYATDSDEHLEVLLNSQSPLGKMSDVTLLKIGSEEPHFDGIMD 840
Query: 841 GFSGKAAEDLFNAHEILPGPLSPMQTQFSPSSVDSNGLQLSFTESPWETMEWLDLTPPNS 900
GFSGKAAEDLFNAHEILPGPLSPMQTQFSPSSVDSNGLQLSFTESPWETMEWLDLTPPNS
Sbjct: 841 GFSGKAAEDLFNAHEILPGPLSPMQTQFSPSSVDSNGLQLSFTESPWETMEWLDLTPPNS 900
Query: 901 TPGFSALTTSSPSIFNIDFLDVTDLNLNSSMDLHLQQW 938
TPGFSALTTSSPSIFNIDFLDVTDLNLNSSMDLHLQQW
Sbjct: 901 TPGFSALTTSSPSIFNIDFLDVTDLNLNSSMDLHLQQW 938
>gi|226423889 myocardin isoform 1 [Homo sapiens]
Length = 986
Score = 1844 bits (4776), Expect = 0.0
Identities = 938/986 (95%), Positives = 938/986 (95%), Gaps = 48/986 (4%)
Query: 1 MTLLGSEHSLLIRSKFRSVLQLRLQQRRTQEQLANQGIIPPLKRPAEFHEQRKHLDSDKA 60
MTLLGSEHSLLIRSKFRSVLQLRLQQRRTQEQLANQGIIPPLKRPAEFHEQRKHLDSDKA
Sbjct: 1 MTLLGSEHSLLIRSKFRSVLQLRLQQRRTQEQLANQGIIPPLKRPAEFHEQRKHLDSDKA 60
Query: 61 KNSLKRKARNRCNSADLVNMHILQASTAERSIPTAQMKLKRARLADDLNEKIALRPGPLE 120
KNSLKRKARNRCNSADLVNMHILQASTAERSIPTAQMKLKRARLADDLNEKIALRPGPLE
Sbjct: 61 KNSLKRKARNRCNSADLVNMHILQASTAERSIPTAQMKLKRARLADDLNEKIALRPGPLE 120
Query: 121 LVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAGSPP 180
LVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAGSPP
Sbjct: 121 LVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAGSPP 180
Query: 181 DAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVHAAVKS 240
DAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVHAAVKS
Sbjct: 181 DAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVHAAVKS 240
Query: 241 KSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQ 300
KSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQ
Sbjct: 241 KSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQ 300
Query: 301 ILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVS 360
ILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVS
Sbjct: 301 ILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVS 360
Query: 361 SFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDITT 420
SFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDITT
Sbjct: 361 SFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDITT 420
Query: 421 VTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASP 480
VTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASP
Sbjct: 421 VTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASP 480
Query: 481 SFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQR 540
SFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQR
Sbjct: 481 SFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQR 540
Query: 541 QVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPA 600
QVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPA
Sbjct: 541 QVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPA 600
Query: 601 CEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHF 660
CEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHF
Sbjct: 601 CEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHF 660
Query: 661 LPSSSGAQGEGHRVSSPISSQVCTAQ---------------------------------- 686
LPSSSGAQGEGHRVSSPISSQVCTAQ
Sbjct: 661 LPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPPSFSPHSSSLHPPFSGAQADSSHGA 720
Query: 687 --------------MAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQPPSYEDAVKQQMT 732
MAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQPPSYEDAVKQQMT
Sbjct: 721 GGNPCPKSPCVQQKMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQPPSYEDAVKQQMT 780
Query: 733 RSQQMDELLDVLIESGEMPADAREDHSCLQKVPKIPRSSRSPTAVLTKPSASFEQASSGS 792
RSQQMDELLDVLIESGEMPADAREDHSCLQKVPKIPRSSRSPTAVLTKPSASFEQASSGS
Sbjct: 781 RSQQMDELLDVLIESGEMPADAREDHSCLQKVPKIPRSSRSPTAVLTKPSASFEQASSGS 840
Query: 793 QIPFDPYATDSDEHLEVLLNSQSPLGKMSDVTLLKIGSEEPHFDGIMDGFSGKAAEDLFN 852
QIPFDPYATDSDEHLEVLLNSQSPLGKMSDVTLLKIGSEEPHFDGIMDGFSGKAAEDLFN
Sbjct: 841 QIPFDPYATDSDEHLEVLLNSQSPLGKMSDVTLLKIGSEEPHFDGIMDGFSGKAAEDLFN 900
Query: 853 AHEILPGPLSPMQTQFSPSSVDSNGLQLSFTESPWETMEWLDLTPPNSTPGFSALTTSSP 912
AHEILPGPLSPMQTQFSPSSVDSNGLQLSFTESPWETMEWLDLTPPNSTPGFSALTTSSP
Sbjct: 901 AHEILPGPLSPMQTQFSPSSVDSNGLQLSFTESPWETMEWLDLTPPNSTPGFSALTTSSP 960
Query: 913 SIFNIDFLDVTDLNLNSSMDLHLQQW 938
SIFNIDFLDVTDLNLNSSMDLHLQQW
Sbjct: 961 SIFNIDFLDVTDLNLNSSMDLHLQQW 986
>gi|226423891 myocardin isoform 3 [Homo sapiens]
Length = 684
Score = 1242 bits (3213), Expect = 0.0
Identities = 633/681 (92%), Positives = 633/681 (92%), Gaps = 48/681 (7%)
Query: 97 MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEED 156
MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEED
Sbjct: 1 MKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEED 60
Query: 157 SSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSH 216
SSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSH
Sbjct: 61 SSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSH 120
Query: 217 QSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAE 276
QSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAE
Sbjct: 121 QSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAE 180
Query: 277 KSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS 336
KSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS
Sbjct: 181 KSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS 240
Query: 337 SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTA 396
SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTA
Sbjct: 241 SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTA 300
Query: 397 LMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSP 456
LMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSP
Sbjct: 301 LMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSP 360
Query: 457 PISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSE 516
PISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSE
Sbjct: 361 PISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSE 420
Query: 517 KDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAV 576
KDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAV
Sbjct: 421 KDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAV 480
Query: 577 SSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQ 636
SSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQ
Sbjct: 481 SSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQ 540
Query: 637 HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQ---------- 686
HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQ
Sbjct: 541 HSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQNSGAHDGHPP 600
Query: 687 --------------------------------------MAGLHSSDKVGPKFSIPSPTFS 708
MAGLHSSDKVGPKFSIPSPTFS
Sbjct: 601 SFSPHSSSLHPPFSGAQADSSHGAGGNPCPKSPCVQQKMAGLHSSDKVGPKFSIPSPTFS 660
Query: 709 KSSSAISEVTQPPSYEDAVKQ 729
KSSSAISEVTQPPSYEDAVKQ
Sbjct: 661 KSSSAISEVTQPPSYEDAVKQ 681
>gi|38569480 megakaryoblastic leukemia 2 protein [Homo sapiens]
Length = 1049
Score = 506 bits (1302), Expect = e-143
Identities = 382/1045 (36%), Positives = 540/1045 (51%), Gaps = 156/1045 (14%)
Query: 4 LGSEHSLLIRSKFRSVLQLRLQQRRTQEQLANQGIIPPLKRPAEFHEQRKHLDSDKAKNS 63
L S +L ++ ++VLQLRLQQRRT+EQL +QGI+PPLK PA FHEQ K L+ + +N
Sbjct: 37 LQSSQNLPPLNERKNVLQLRLQQRRTREQLVDQGIMPPLKSPAAFHEQIKSLERARTENF 96
Query: 64 LKRKARNRCNSADLVNMHILQASTAERSIPTAQMKLKRARLADDLNEKIALRPGPLELVE 123
LK K R+R + ++LV MHIL+ + AE S+ QMKLKRARLADDLNEKIA RPGP+ELVE
Sbjct: 97 LKHKIRSRPDRSELVRMHILEETFAEPSLQATQMKLKRARLADDLNEKIAQRPGPMELVE 156
Query: 124 KNILPVDSAVKEAIKG-NQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAGSPPDA 182
KNILPVDS+VKEAI G + + + F+F+ED SSD LSPDQ S++ Q SA SP +
Sbjct: 157 KNILPVDSSVKEAIIGVGKEDYPHTQGDFSFDED-SSDALSPDQPASQESQGSAASPSEP 215
Query: 183 KASDTPSTGSLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVHAAVKSKS 242
K S++PS + T AS S + P+ + P+ P+ V S
Sbjct: 216 KVSESPSPVTTNTPAQFASVSPTVPEFLKTPPTADQPPPR-----PAAPVLPTNTVSSAK 270
Query: 243 LG------------DSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLL 290
G + K+R KK KDPKP+VKKLKYHQYIPPDQK EK+ P MDS YARLL
Sbjct: 271 PGPALVKQSHPKNPNDKHRSKKCKDPKPRVKKLKYHQYIPPDQKGEKNEPQMDSNYARLL 330
Query: 291 QQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSN-TPLSPV 349
QQQQLFLQLQILSQQ+Q ++Y + A K N+ +N NS ++ L+N TP +P
Sbjct: 331 QQQQLFLQLQILSQQKQ----HYNYQTILPAPFKPLND---KNSNSGNSALNNATPNTPR 383
Query: 350 KNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSG 409
+N T KPGPLP +LDDLKVSEL+ +L++RGLPVSGTK L++RL+P+Q+ +
Sbjct: 384 QN-----TSTPVRKPGPLPSSLDDLKVSELKTELKLRGLPVSGTKPDLIERLKPYQEVNS 438
Query: 410 NPVPNFGDI-------------TTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSS-- 454
+ + G + TV PVT TL N +SS S L G++++
Sbjct: 439 SGLAAGGIVAVSSSAIVTSNPEVTVALPVT--TLHN-TVTSSVSTLKAELPPTGTSNATR 495
Query: 455 -----SP-PISPASSDLSVAG----SLPDTFND----ASPSFGLHPSPVHVCTEESLMSS 500
SP PISP+ S+ S ++ DTF + SPS L SP+ + E +S
Sbjct: 496 VENVHSPLPISPSPSEQSSLSTDDTNMADTFTEIMTMMSPSQFLSSSPLRMTNNEDSLSP 555
Query: 501 LNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEK 560
+ ELD +EKD+ L EK+K I EL KL+QEQ+ VE L+MQL+ +KR ++
Sbjct: 556 TSSTLSNLELDA--AEKDRKLQEKEKQIEELKRKLEQEQKLVEVLKMQLEVEKRG--QQQ 611
Query: 561 KPLP-----------------FLAASIKQEEAVSSCPFASQ-VPVKRQSSSSECHPPACE 602
+PL L +SIK E ++ C + Q +PV +S P
Sbjct: 612 RPLEAQPSAPGHSVKSDQKHGSLGSSIKDEASLPDCSSSRQPIPV----ASHAVGQPVST 667
Query: 603 AAQLQPLGNAHCVE------SSDQTNVLSSTFLSPQCSPQHSPLGAVKS----------- 645
Q A ++ ++Q +V+S + SPQ Q P A +
Sbjct: 668 GGQTLVAKKAVVIKQEVPVGQAEQQSVVSQFYTSPQAGMQTQPQIATAAQIPTAALASGL 727
Query: 646 -----------PQHISLPPSPNNPHFLPSSSG------AQGEGHRVSSPISS-------Q 681
PQH+ P F S+S + V P + Q
Sbjct: 728 APTVPQTQDTFPQHVLSQPQQVRKVFTNSASSNTVLPYQRHPAPAVQQPFINKASNSVLQ 787
Query: 682 VCTAQMAGLHSSDKVGPKFSIPSP------TFSKSSSAISEVTQPPSYEDAVKQQMT--- 732
A + L + K S P P S S +++ PP YE+A+KQ +
Sbjct: 788 SRNAPLPSLQNGPNTPNKPSSPPPPQQFVVQHSLFGSPVAKTKDPPRYEEAIKQTRSTQA 847
Query: 733 --------RSQQMDELLDVLIESGEMPADAREDHSCLQKVPKIPRS--SRSPTAVLTKPS 782
SQQMD+L D+LI+SGE+ +E+ S + K+ + S + V+++P
Sbjct: 848 PLPEISNAHSQQMDDLFDILIKSGEISLPIKEEPSPISKMRPVTASITTMPVNTVVSRPP 907
Query: 783 ASFEQASSGSQIPFDPYATDSDEHLEVLLNSQSPLGKMSDVTLLKIGSEEPHFDGIMDGF 842
+ A S P + + LE L+ P +++ L+ SE+ +++
Sbjct: 908 PQVQMAPPVSLEPMGSLSASLENQLEAFLDGTLP--SANEIPPLQSSSEDREPFSLIEDL 965
Query: 843 SGKAAEDLFNAHEILPGPLSPMQTQFSPSSVDSNGLQLSFTESPWETMEWLDLTPPNSTP 902
DL + +L SPM+T + + + L L ++S + MEWLD+T PNS+
Sbjct: 966 Q----NDLLSHSGMLDHSHSPMETSETQFAAGTPCLSLDLSDSNLDNMEWLDITMPNSSS 1021
Query: 903 GFSALTTSSPSIFNIDFLDVTDLNL 927
G + L+T++PS+F+ DFLD DL L
Sbjct: 1022 GLTPLSTTAPSMFSADFLDPQDLPL 1046
>gi|14269566 megakaryoblastic leukemia 1 protein [Homo sapiens]
Length = 931
Score = 449 bits (1156), Expect = e-126
Identities = 356/969 (36%), Positives = 495/969 (51%), Gaps = 122/969 (12%)
Query: 39 IPPLKRPAEFHEQRKHLDSDKAKNSLKRKARNRCNSADLVNMHILQASTAERSIPTAQMK 98
+PPLK PA FHEQR+ L+ + ++ LKRK R+R ++LV MHIL+ ++AE S+ Q+K
Sbjct: 1 MPPLKSPAAFHEQRRSLERARTEDYLKRKIRSRPERSELVRMHILEETSAEPSLQAKQLK 60
Query: 99 LKRARLADDLNEKIALRPGPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSS 158
LKRARLADDLNEKIA RPGP+ELVEKNILPV+S++KEAI QV++ K D+ +F+ED S
Sbjct: 61 LKRARLADDLNEKIAQRPGPMELVEKNILPVESSLKEAIIVGQVNYPKVADSSSFDED-S 119
Query: 159 SDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQ--PSH 216
SD LSP+Q S + Q S SP +A+ S+ + + + + S R DS +
Sbjct: 120 SDALSPEQPASHESQGSVPSPLEARVSEPLLSATSASPTQVVSQLPMGR-DSREMLFLAE 178
Query: 217 QSDAGKQGLGPP------------STPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLK 264
Q L PP STP + + + KS + R KK K+ KPKVKKLK
Sbjct: 179 QPPLPPPPLLPPSLTNGTTIPTAKSTPTLIKQS-QPKSASEKSQRSKKAKELKPKVKKLK 237
Query: 265 YHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLK 324
YHQYIPPDQK ++ PPMDS+YA++LQQQQLFLQLQIL+QQQQQ + +QA L
Sbjct: 238 YHQYIPPDQKQDRGAPPMDSSYAKILQQQQLFLQLQILNQQQQQHHN-------YQAILP 290
Query: 325 EPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSF----------KPGPLPPNLDDL 374
P + SS TP + + +S SG G KPG LP NLDD+
Sbjct: 291 APPKSAGEALGSSGTPPVRSLSTTNSSSSSGAPGPCGLARQNSTSLTGKPGALPANLDDM 350
Query: 375 KVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVP-------------NFGDITTV 421
KV+EL+Q+L++R LPVSGTKT L++RLR +QD +PVP G++ V
Sbjct: 351 KVAELKQELKLRSLPVSGTKTELIERLRAYQD-QISPVPGAPKAPAATSILHKAGEV-VV 408
Query: 422 TFPVTP-NTLPNYQSSSSTSA-------LSNGFYHFGSTSSSPPISPASSDLSV-----A 468
FP +T P ++ A S+G FGST S+PP+SP S+ S+
Sbjct: 409 AFPAARLSTGPALVAAGLAPAEVVVATVASSGVVKFGSTGSTPPVSPTPSERSLLSTGDE 468
Query: 469 GSLP-DTFND--ASP--SFGLHPSPVHVCTEES---LMSSLNGGSVPSELDGLDSEKDKM 520
S P DTF + SP L SP+ + +E S +EL+G D KD+M
Sbjct: 469 NSTPGDTFGEMVTSPLTQLTLQASPLQILVKEEGPRAGSCCLSPGGRAELEGRD--KDQM 526
Query: 521 LVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCP 580
L EK K I LT L+Q+Q+ VE L++QL+++KR P P L +KQE + SSC
Sbjct: 527 LQEKDKQIEALTRMLRQKQQLVERLKLQLEQEKRAQQPAPAPAP-LGTPVKQENSFSSCQ 585
Query: 581 FASQVPVKRQSSSSECHP--PACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHS 638
SQ P+ HP P+ A + + V + V+ L P+ P +
Sbjct: 586 L-SQQPL------GPAHPFNPSLAAPATNHI-DPCAVAPGPPSVVVKQEALQPEPEPVPA 637
Query: 639 PLGAVKSPQHISLPPSPNNPHFLPSSSGAQ----GEGHRVSSPISSQVCTAQMAGLHSSD 694
P + PQ SL P + S+G SP S Q + S
Sbjct: 638 P-QLLLGPQGPSLIKGVAPPTLITDSTGTHLVLTVTNKNADSPGLSSGSPQQPSSQPGSP 696
Query: 695 KVGPKFSIP-----SPTFSKSSSAISEVTQPPSYEDAVKQQM------TRSQQMDELLDV 743
P + P F +S + + +PP YE+A+ QQ + SQQMD+L D+
Sbjct: 697 APAPSAQMDLEHPLQPLFGTPTSLLKK--EPPGYEEAMSQQPKQQENGSSSQQMDDLFDI 754
Query: 744 LIESGEMPADAREDHSCLQKVPKIPRS-SRSPTAVLTKPSASFEQASSGSQIPFDPYATD 802
LI+SGE+ AD +E S K P++ SP A PSA QA+ P P +
Sbjct: 755 LIQSGEISADFKEPPSLPGKEKPSPKTVCGSPLAAQPSPSAELPQAA-----PPPPGSPS 809
Query: 803 SDEHLEVLLNSQSPLGKMSDVTLLKIGSEEPHFDGIMDGFSGKAAEDLFNAHEILPGPLS 862
LE L S + L LL G + P ++D + + ++ IL P S
Sbjct: 810 LPGRLEDFLESSTGL------PLLTSGHDGPEPLSLIDDLHSQ----MLSSTAILDHPPS 859
Query: 863 PMQT---QFSPSSVDSNGLQLSFTESPWETMEWLDLTPPNSTPGFSALTTSSPSIFNIDF 919
PM T F P + GL L+ + ++M+WL+L+ + L+T++PS+F+ DF
Sbjct: 860 PMDTSELHFVPEPSSTMGLDLA--DGHLDSMDWLELSSGGPVLSLAPLSTTAPSLFSTDF 917
Query: 920 LDVTDLNLN 928
LD DL L+
Sbjct: 918 LDGHDLQLH 926
>gi|195963410 MEF2 activating motif and SAP domain containing
transcriptional regulator isoform 1 [Homo sapiens]
Length = 415
Score = 63.2 bits (152), Expect = 1e-09
Identities = 71/275 (25%), Positives = 99/275 (36%), Gaps = 75/275 (27%)
Query: 251 KKPKDPKPKVKK----------LKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQ 300
+ PK PK+ + L YHQY+PP+ + P
Sbjct: 76 RSPKKESPKISQRWRESKPRGNLTYHQYMPPEPRQGSRADP------------------- 116
Query: 301 ILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVS 360
Q S LG L E + +P +PL TP P GV
Sbjct: 117 ---------QAEGSALGPPGPSLWEGTDSQQPHPRMKPSPL--TPCPP---------GV- 155
Query: 361 SFKPGPLPP---------NLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNP 411
P P PP L++L VSELRQQLR+RGLPVSGTK+ L++R+R P
Sbjct: 156 ---PSPSPPPHKLELQTLKLEELTVSELRQQLRLRGLPVSGTKSMLLERMRGGAPPRERP 212
Query: 412 VPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPI-----SPASSDLS 466
P D P + + +A G + S PP+ +P ++
Sbjct: 213 KPRREDSPAGA------PWPRLKPKALAAARRQGSVKPSAASHRPPLPRAADTPGTAPAP 266
Query: 467 VAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSL 501
P +PS G P + EE L ++
Sbjct: 267 TPTPAPAAAPALTPSSG--PGSAALTLEEELQEAI 299
Score = 37.4 bits (85), Expect = 0.066
Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
Query: 1 MTLLGS-EHSLLIRSKFRSVLQLRLQQRRTQEQLAN 35
MTL S + S +IRSKFRSVLQLR+ RR QEQ+++
Sbjct: 1 MTLAASSQRSQIIRSKFRSVLQLRI-HRRNQEQISD 35
>gi|32698970 MEF2 activating motif and SAP domain containing
transcriptional regulator isoform 2 [Homo sapiens]
Length = 312
Score = 56.6 bits (135), Expect = 1e-07
Identities = 58/202 (28%), Positives = 80/202 (39%), Gaps = 37/202 (18%)
Query: 314 SYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPP---- 369
S LG L E + +P +PL TP P GV P P PP
Sbjct: 18 SALGPPGPSLWEGTDSQQPHPRMKPSPL--TPCPP---------GV----PSPSPPPHKL 62
Query: 370 -----NLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFP 424
L++L VSELRQQLR+RGLPVSGTK+ L++R+R P P D
Sbjct: 63 ELQTLKLEELTVSELRQQLRLRGLPVSGTKSMLLERMRGGAPPRERPKPRREDSPAGA-- 120
Query: 425 VTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPI-----SPASSDLSVAGSLPDTFNDAS 479
P + + +A G + S PP+ +P ++ P +
Sbjct: 121 ----PWPRLKPKALAAARRQGSVKPSAASHRPPLPRAADTPGTAPAPTPTPAPAAAPALT 176
Query: 480 PSFGLHPSPVHVCTEESLMSSL 501
PS G P + EE L ++
Sbjct: 177 PSSG--PGSAALTLEEELQEAI 196
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 51.6 bits (122), Expect = 3e-06
Identities = 119/605 (19%), Positives = 223/605 (36%), Gaps = 92/605 (15%)
Query: 131 SAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAG-SPPDAKASDTPS 189
S + + G Q T A ++ G P ++ P + +PP++ P
Sbjct: 1834 SMQRTGVVGQQQGLPSPTPA----TPTTPTGQQPTTPQTPQPTSQPQPTPPNSMPPYLPR 1889
Query: 190 TGSLG-TNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKN 248
T + G +Q A+G + P+ A GPP P AV A++ + +++
Sbjct: 1890 TQAAGPVSQGKAAGQ-------VTPPTPPQTAQPPLPGPP--PAAVEMAMQIQRAAETQR 1940
Query: 249 RHKKPKDPKPKVKKLKYHQYIP--PDQKAEKSPPPMDSAYARLLQQQQLFLQLQILSQQQ 306
+ + + ++ HQ P P +PPPM + L+ +
Sbjct: 1941 QMAHVQIFQRPIQ----HQMPPMTPMAPMGMNPPPMTRGPSGHLEPG--------MGPTG 1988
Query: 307 QQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGP 366
QQQ +S G+ Q Q + + P S PL+ GQ G+S KPG
Sbjct: 1989 MQQQPPWSQGGLPQPQQLQSG---MPRPAMMSVAQHGQPLNMAPQPGLGQVGISPLKPGT 2045
Query: 367 LPPN-LDDL------KVSELRQQLRIRGLPVSGTKTA--LMDRLRPFQDCSGNPVPNFGD 417
+ L +L S L+QQ + L + A + R + + + P+P
Sbjct: 2046 VSQQALQNLLRTLRSPSSPLQQQQVLSILHANPQLLAAFIKQRAAKYANSNPQPIPGQPG 2105
Query: 418 ITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFND 477
+ + P T+P Q S A+ N ++P + + AG LP
Sbjct: 2106 MPQGQPGLQPPTMPGQQGVHSNPAMQN-------------MNPMQAGVQRAG-LP----Q 2147
Query: 478 ASPSFGLHPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQK---------VI 528
P L P P+ + ++ ++N ++PS+ + + M ++Q+ +
Sbjct: 2148 QQPQQQLQP-PMGGMSPQAQQMNMNHNTMPSQFRDILRRQQMMQQQQQQGAGPGIGPGMA 2206
Query: 529 NELTWKLQQ----EQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQ 584
N ++ Q +Q + ++ +Q+ ++ N + LP ++ E S + +
Sbjct: 2207 NHNQFQQPQGVGYPPQQQQRMQHHMQQMQQGNMGQIGQLP---QALGAEAGASLQAYQQR 2263
Query: 585 VPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSP----- 639
+ ++ S + +P + + L + ++ N LS+ SPQ P P
Sbjct: 2264 LLQQQMGSPVQPNPMSPQQHMLPNQAQSPHLQGQQIPNSLSNQVRSPQPVPSPRPQSQPP 2323
Query: 640 -------LGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVS----SPISSQVCTAQMA 688
+ SP H+S S +P + + + +GH S S +S MA
Sbjct: 2324 HSSPSPRMQPQPSPHHVSPQTSSPHPGLVAAQANPMEQGHFASPDQNSMLSQLASNPGMA 2383
Query: 689 GLHSS 693
LH +
Sbjct: 2384 NLHGA 2388
>gi|148368962 NKF3 kinase family member [Homo sapiens]
Length = 1746
Score = 50.1 bits (118), Expect = 1e-05
Identities = 133/626 (21%), Positives = 229/626 (36%), Gaps = 100/626 (15%)
Query: 130 DSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAGSPPDAK-ASDTP 188
D + E + G + + S + + SSD SPD + +E+ ++ S K +
Sbjct: 310 DDSYDEILNGYEENSVVSYGQGSIQSMVSSDSTSPDSSLTEESRSETASSLSQKICNGGL 369
Query: 189 STGSLGTNQDLASGSENDRNDSA-SQPSHQSDAGKQGLGPPSTPIAVHAAVKSKSLGDSK 247
S G+ G ++D+ N + S+ +Q S A K + P T H AV + L
Sbjct: 370 SPGNPGDSKDMKEIEPNYESPSSNNQDKDSSQASKSSIKVPET----HKAVLALRL---- 421
Query: 248 NRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQILSQQQQ 307
+ KD K V+ K D + + L+ ++ ++++ +Q
Sbjct: 422 ----EEKDGKIAVQTEKEESKASTDVAGQ-------AVTINLVPTEEQAKPYRVVNLEQP 470
Query: 308 QQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPL 367
+ ++ + + A E E V +P + S+ S+TP SPV + SS PG +
Sbjct: 471 LCK-PYTVVDVSAAMASEHLEGPVNSPKTKSS--SSTPNSPVTS--------SSLTPGQI 519
Query: 368 PPNLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTP 427
+ K S +R Q S +P + +T P
Sbjct: 520 SAHFQ--KSSAIRYQ--------------------EVWTSSTSPRQKIPKVELITSGTGP 557
Query: 428 NTLP--NYQSSSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLH 485
N P N S+ TS + S+ + P SP S++ +++N+A G+
Sbjct: 558 NVPPRKNCHKSAPTSPTATNI----SSKTIPVKSPNLSEIKF-----NSYNNA----GMP 604
Query: 486 PSPVHVCTEES-LMSSLNGGSV-----PSELDGLDSEKDKMLVEKQKVINELTWKL---Q 536
P P+ + E + SS N V P+ D L K + + + E T +
Sbjct: 605 PFPIIIHDEPTYARSSKNAIKVPIVINPNAYDNLAIYKSFLGTSGELSVKEKTTSVISHT 664
Query: 537 QEQRQVEELRMQLQKQKRNNCSEKK----PLPFLAASIKQE-EAVSSCPFASQVPVKRQS 591
E+ + E K +C + K S+ Q+ + ++C Q +R
Sbjct: 665 YEEIETESKVPDNTTSKTTDCLQTKGFSNSTEHKRGSVAQKVQEFNNCLNRGQSSPQRSY 724
Query: 592 SSSECHPPACEAAQLQPLGNAHCVE-----SSDQTNVLSSTFLS-------PQCSPQHSP 639
SSS P + A +P+ + S T +ST LS P SP +P
Sbjct: 725 SSSHSSPAKIQRATQEPVAKIEGTQESQMVGSSSTREKASTVLSQIVASIQPPQSPPETP 784
Query: 640 LGAVKS---PQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQMAGLHSSDKV 696
K+ + ++PP + P S+ + + S P S A + KV
Sbjct: 785 QSGPKACSVEELYAIPPDADVAKSTPKSTPVRPKSLFTSQP--SGEAEAPQTTDSPTTKV 842
Query: 697 GPKFSIPSPTFSKSSSAISEVTQPPS 722
SI T S S S ++PP+
Sbjct: 843 QKDPSIKPVTPSPSKLVTSPQSEPPA 868
>gi|32307128 nuclear receptor coactivator 6 [Homo sapiens]
Length = 2063
Score = 47.4 bits (111), Expect = 6e-05
Identities = 98/451 (21%), Positives = 162/451 (35%), Gaps = 71/451 (15%)
Query: 74 SADLVNMHILQASTAERSIPTAQMKLKRARLADDLNEKIALRPGPLELVEKNILPVDSAV 133
S + H A+TA + +QM + D ++ + P ++ ++ N SA
Sbjct: 794 SPHMAQQHGDPATTANNDVSLSQM------MPDVSIQQTNMVPPHVQAMQGN-----SAS 842
Query: 134 KEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSL 193
G+ +SF+ A + S G +P ++D ++ + SD S G
Sbjct: 843 GNHFSGHGMSFNAPFSG-APNGNQMSCGQNPGFPVNKDVTLTSPLLVNLLQSDI-SAGHF 900
Query: 194 GTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPST-PIAVHAAVKSKSLGDS------ 246
G N + N +P + +Q L P T P + A + G+
Sbjct: 901 GVNNK--QNNTNANKPKKKKPPRKKKNSQQDLNTPDTRPAGLEEADQPPLPGEQGINLDN 958
Query: 247 ------KNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPM---DSAYARLLQQQQLFL 297
+ ++ P P V++ Q +PP +PPP +L QQQQ
Sbjct: 959 SGPKLPEFSNRPPGYPSQPVEQRPLQQ-MPPQLMQHVAPPPQPPQQQPQPQLPQQQQPPP 1017
Query: 298 QLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLS-NTPLSPVKNSFSGQ 356
Q SQQQQQQQ + + M Q K + +N + PL+ ++ P++ S S
Sbjct: 1018 PSQPQSQQQQQQQQQMMMMLMMQQDPKSVRLPVSQNVHPPRGPLNPDSQRMPMQQSGSVP 1077
Query: 357 TGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNP----- 411
VS P +PP+ D ++ +PV+ T R +Q+ NP
Sbjct: 1078 VMVSLQGPASVPPSPDKQRMP----------MPVN-TPLGSNSRKMVYQESPQNPSSSPL 1126
Query: 412 -----VPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNG--------FYHFGSTSSSPPI 458
+P + P PN +P++ + G G+T PP+
Sbjct: 1127 AEMASLPEASGSEAPSVPGGPNNMPSHVVLPQNQLMMTGPKPGPSPLSATQGATPQQPPV 1186
Query: 459 SPASSD---------LSVAGSLPDTFNDASP 480
+ S S P T N ASP
Sbjct: 1187 NSLPSSHGHHFPNVAAPTQTSRPKTPNRASP 1217
Score = 33.9 bits (76), Expect = 0.73
Identities = 59/239 (24%), Positives = 76/239 (31%), Gaps = 38/239 (15%)
Query: 265 YHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLK 324
+H P + +P + QQQQ Q Q QQQQQQQ + HQ Q
Sbjct: 240 HHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQHQQQQP 299
Query: 325 E-------PNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVS 377
+ Q+ P + P P + S T +K PLP
Sbjct: 300 QGIRPQFTAPTQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLP--------G 351
Query: 378 ELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVP-NFGDITT----VTFPVTPN---- 428
++QQL+ R L Q S P P FG FP N
Sbjct: 352 PMQQQLQAR------------PSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQF 399
Query: 429 TLPNYQS-SSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHP 486
T P +S S + T+ SP SP+S S P T N G P
Sbjct: 400 TAPQMKSLQGGPSRVPTPLQQPHLTNKSPASSPSSFQQGSPASSP-TVNQTQQQMGPRP 457
Score = 33.5 bits (75), Expect = 0.95
Identities = 65/311 (20%), Positives = 108/311 (34%), Gaps = 48/311 (15%)
Query: 451 STSSSPPISPASSDLSVAGSLPD----TFNDASPSFGLHP--SPVHVCTEESLMSSLNGG 504
+T PP SS + G P+ T AS S + P S +H+ + SL
Sbjct: 180 ATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAPP 239
Query: 505 SVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLP 564
P + ++ + + +L + QQ+Q+Q ++ + Q Q+Q++ + P
Sbjct: 240 HHPMQPVSVNRQMNPANFP------QLQQQQQQQQQQQQQQQQQQQQQQQQQLQARPPQQ 293
Query: 565 FLAASIKQEEAVSSCPFASQVPVK---RQSSSSECHPPACEAA----------QLQPLGN 611
+ + P +QVPV Q S PP + + + PL
Sbjct: 294 HQQQQPQGIRPQFTAP--TQVPVPPGWNQLPSGALQPPPAQGSLGTMTANQGWKKAPLPG 351
Query: 612 AHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQ-HISLPPSPNNPHF-LPSSSGAQG 669
++ Q +T +P P P G+ ++ Q H + P N F P QG
Sbjct: 352 P--MQQQLQARPSLATVQTPSHPPPPYPFGSQQASQAHTNFPQMSNPGQFTAPQMKSLQG 409
Query: 670 EGHRVSSPISSQVCTAQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQPPSYEDAVKQ 729
RV +P+ P + SP S SS P+ +Q
Sbjct: 410 GPSRVPTPLQQ-----------------PHLTNKSPASSPSSFQQGSPASSPTVNQTQQQ 452
Query: 730 QMTRSQQMDEL 740
R Q + L
Sbjct: 453 MGPRPPQNNPL 463
Score = 32.3 bits (72), Expect = 2.1
Identities = 38/165 (23%), Positives = 56/165 (33%), Gaps = 27/165 (16%)
Query: 227 PPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKK---------LKYHQYIPPDQKAEK 277
P + I V S + N +P+ P+P + L Q P
Sbjct: 179 PATVMIPPGGNVSSSMMAPGPNPELQPRTPRPASQSDAMDPLLSGLHIQQQSHPSGSLAP 238
Query: 278 SPPPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSS 337
PM F QLQ QQQQQQQ + Q Q ++ +Q+ P
Sbjct: 239 PHHPMQPVSVNRQMNPANFPQLQQQQQQQQQQQQQ-----QQQQQQQQQQQQLQARP--- 290
Query: 338 STPLSNTPLSP--VKNSFSGQTGVSSFKPGPLPPNLDDLKVSELR 380
P + P ++ F+ T V P+PP + L L+
Sbjct: 291 --PQQHQQQQPQGIRPQFTAPTQV------PVPPGWNQLPSGALQ 327
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 45.1 bits (105), Expect = 3e-04
Identities = 53/213 (24%), Positives = 80/213 (37%), Gaps = 47/213 (22%)
Query: 167 TRSEDPQNSAGSPPDAKASDTPSTGSL-------GTNQDLASGSENDRNDSASQPSHQSD 219
T +P+ A +PP A+++ TP + G+ +SGS PS +
Sbjct: 541 TPETEPEEPAQAPP-AQSTPTPGVAAAPTLVSGGGSTSSTSSGSFEASPVEPQLPSKEGP 599
Query: 220 AGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSP 279
+ + PP+TP K +G ++ +P + L Y +Y +KS
Sbjct: 600 EPPEEVPPPTTPPVPKVEPKGDGIGPTR---------QPPSQGLGYPKY-------QKSL 643
Query: 280 PPMDSAYARLLQQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNS--- 336
PP Q+QQ Q Q+L QQQQ Q + HQ P P
Sbjct: 644 PPR-------FQRQQ---QEQLLKQQQQHQWQQ------HQQGSAPPTPVPPSPPQPVTL 687
Query: 337 SSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPP 369
+ P P P K + G G +P P+PP
Sbjct: 688 GAVPAPQAPPPPPKALYPGALG----RPPPMPP 716
Score = 35.4 bits (80), Expect = 0.25
Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 31/242 (12%)
Query: 504 GSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEK-KP 562
G P + + E + +++ +E++ +++ +R+ EE ++Q+++R C+EK K
Sbjct: 433 GGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRAACAEKLKR 492
Query: 563 LPF-LAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQT 621
L A K+ +A + P A+ S+ PPA P + +T
Sbjct: 493 LDEKFGAPDKRLKAEPAAPPAAP--------STPAPPPAVPKELPAPPAPPPASAPTPET 544
Query: 622 NVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQ 681
P+ Q P + +P + P + S+S E +SP+ Q
Sbjct: 545 E--------PEEPAQAPPAQSTPTPGVAAAPTLVSGGGSTSSTSSGSFE----ASPVEPQ 592
Query: 682 VCTAQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQPPS-------YEDAVKQQMTRS 734
+ + + G ++V P + P P I QPPS Y+ ++ + R
Sbjct: 593 LPSKE--GPEPPEEVPPPTTPPVPKVEPKGDGIGPTRQPPSQGLGYPKYQKSLPPRFQRQ 650
Query: 735 QQ 736
QQ
Sbjct: 651 QQ 652
>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 43.5 bits (101), Expect = 0.001
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 117 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 176
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRHSASSG 71
Query: 177 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 235
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 236 -----AAVKSK-SLGDSKNRHKKPKDPKP 258
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|169166499 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 43.5 bits (101), Expect = 0.001
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 117 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 176
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRHSASSG 71
Query: 177 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 235
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 236 -----AAVKSK-SLGDSKNRHKKPKDPKP 258
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|113415498 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 43.5 bits (101), Expect = 0.001
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 117 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 176
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRHSASSG 71
Query: 177 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 235
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 236 -----AAVKSK-SLGDSKNRHKKPKDPKP 258
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|88973230 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 3 [Homo sapiens]
Length = 305
Score = 43.5 bits (101), Expect = 0.001
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 117 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 176
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRHSASSG 71
Query: 177 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 235
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 236 -----AAVKSK-SLGDSKNRHKKPKDPKP 258
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 6 [Homo sapiens]
Length = 305
Score = 43.1 bits (100), Expect = 0.001
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 117 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 176
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRRSASSG 71
Query: 177 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 235
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 236 -----AAVKSK-SLGDSKNRHKKPKDPKP 258
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 2 [Homo sapiens]
Length = 305
Score = 43.1 bits (100), Expect = 0.001
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 117 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 176
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRRSASSG 71
Query: 177 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 235
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 236 -----AAVKSK-SLGDSKNRHKKPKDPKP 258
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|7661990 mastermind-like 1 [Homo sapiens]
Length = 1016
Score = 43.1 bits (100), Expect = 0.001
Identities = 144/682 (21%), Positives = 236/682 (34%), Gaps = 110/682 (16%)
Query: 61 KNSLKRKARNRCNSADLVNMHILQASTAERSIPTAQMKLKRARLADDLNEKIALRPGPLE 120
K+SL + N+ AD ++H+ S S P + K + +DL I G +
Sbjct: 178 KHSLGLDSLNKKRLADS-SLHLNGGSNPSESFPLSLNKELKQEPVEDLPCMITGTVGSIS 236
Query: 121 LVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAGSPP 180
+ N++P + ++ K ++S ++ D + D +DP++S
Sbjct: 237 --QSNLMPDLNLNEQEWKELIEELNRSVP-----DEDMKDLFNEDFEEKKDPESSGS--- 286
Query: 181 DAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVHAAVKS 240
A+ TP + + S + ++ S AG+ LGP S P++ S
Sbjct: 287 ---ATQTPLAQDINIKTEF-SPAAFEQEQLGSPQVRAGSAGQTFLGPSSAPVSTD----S 338
Query: 241 KSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQ 300
SLG S+ P+ A+ P + A A+ Q+ +
Sbjct: 339 PSLGGSQTLFHTSGQPR-----------------ADNPSPNLMPASAQAQNAQRALAGVV 381
Query: 301 ILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVS 360
+ SQ S + Q K+ EQM++NP +TP +P + S QTG S
Sbjct: 382 LPSQGPGGASELSSAHQLQQIAAKQKREQMLQNP-QQATPAP----APGQMSTWQQTGPS 436
Query: 361 SFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDITT 420
P S +Q + +K +M + G P +
Sbjct: 437 HSSLDVPYPMEKPASPSSYKQDF-------TNSKLLMMPSVNKSSPRPGGPYLQPSHVNL 489
Query: 421 VTFPVTPNTLPNYQSSSSTSALSNG----FYHF---------GSTSSSPP---------- 457
++ P+ L +++ S L G H+ GS S P
Sbjct: 490 LSHQ-PPSNLNQNSANNQGSVLDYGNTKPLSHYKADCGQGSPGSGQSKPALMAYLPQQLS 548
Query: 458 -ISPASSDLSVAGSLPDTFNDAS---PSFGLHPSPVHVCTEE----------SLMSSLNG 503
IS + L + P S P +PS V V + S+ SS N
Sbjct: 549 HISHEQNSLFLMKPKPGNMPFRSLVPPGQEQNPSSVPVQAQATSVGTQPPAVSVASSHNS 608
Query: 504 GS-VPSELDGLDSEKDKMLVEKQKVINELTWKLQQE---QRQVEELRMQLQKQKRNNCSE 559
+ S+ ++ ++L+++QK + LQQ+ QRQ L Q ++Q + + +
Sbjct: 609 SPYLSSQQQAAVMKQHQLLLDQQKQREQQQKHLQQQQFLQRQQHLLAEQEKQQFQRHLTR 668
Query: 560 KKPL---PFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVE 616
P P + +Q + A S+S C +A L P+G H
Sbjct: 669 PPPQYQDPTQGSFPQQVGQFTGSSAAVPGMNTLGPSNSSCPRVFPQAGNLMPMGPGHASV 728
Query: 617 SSDQTNVLS-----STFLSPQCSPQHSPLGAVKSPQHISLPPSP---NNPHFLP------ 662
SS TN + F Q PQ S G I P P N +P
Sbjct: 729 SSLPTNSGQQDRGVAQFPGSQNMPQSSLYGMASGITQIVAQPPPQATNGHAHIPRQTNVG 788
Query: 663 ---SSSGAQGEGHRVSSPISSQ 681
S S A G+ SS +S Q
Sbjct: 789 QNTSVSAAYGQNSLGSSGLSQQ 810
Score = 31.6 bits (70), Expect = 3.6
Identities = 77/350 (22%), Positives = 122/350 (34%), Gaps = 37/350 (10%)
Query: 176 AGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 235
AG A+ P+ + D A G E+ R +H D K+ L ++P
Sbjct: 71 AGKHRQPPAATAPAPAAPAPRLDAADGPEHGR-----PATHLHDTVKRNLDSATSP---Q 122
Query: 236 AAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQL 295
+ GD HKK + P + + +PP +S P S L +
Sbjct: 123 NGDQQNGYGDLFPGHKKTRREAPLGVAISSNG-LPPASPLGQSDKP--SGADALQSSGKH 179
Query: 296 FLQLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSG 355
L L L+++ R + +H P+E P S + L P+ + +G
Sbjct: 180 SLGLDSLNKK------RLADSSLHLNGGSNPSESF---PLSLNKELKQEPVEDLPCMITG 230
Query: 356 QTGVSSFKPGPLPP--NLDDLKVSELRQQLRIRGLPVSGTKTALMDRLR----PFQDCSG 409
G S L P NL++ + EL ++L R +P K + P S
Sbjct: 231 TVG--SISQSNLMPDLNLNEQEWKELIEELN-RSVPDEDMKDLFNEDFEEKKDPESSGSA 287
Query: 410 NPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPISPASSDLSVAG 469
P DI T +P Q S + G T P +P S+D G
Sbjct: 288 TQTPLAQDINIKT-EFSPAAFEQEQLGSPQVRAGSA----GQTFLGPSSAPVSTDSPSLG 342
Query: 470 SLPDTFNDASPSFGLHPSPVHV---CTEESLMSSLNGGSVPSELDGLDSE 516
F+ + +PSP + ++ +L G +PS+ G SE
Sbjct: 343 GSQTLFHTSGQPRADNPSPNLMPASAQAQNAQRALAGVVLPSQGPGGASE 392
>gi|157743257 POU domain, class 6, transcription factor 2 [Homo
sapiens]
Length = 691
Score = 43.1 bits (100), Expect = 0.001
Identities = 56/200 (28%), Positives = 72/200 (36%), Gaps = 36/200 (18%)
Query: 246 SKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFLQLQILSQQ 305
S N+H +P P + + Q PP Q PPP Q QLQ Q
Sbjct: 200 STNQHPQPAPQAPSQSQQQPLQPTPPQQ-----PPPASQ------QPPAPTSQLQQAPQP 248
Query: 306 QQQQQHRFSYLGMHQAQLKEPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPG 365
QQ Q H S +N N S P + P K S S G+ P
Sbjct: 249 QQHQPHSHS-----------------QNQNQPS-PTQQSSSPPQKPSQSPGHGL----PS 286
Query: 366 PL-PPNLDDLKVSELRQQLRIRGLPVSG--TKTALMDRLRPFQDCSGNPVPNFGDITTVT 422
PL PPN L + L Q +S + A + L Q +G V N T
Sbjct: 287 PLTPPNPLQLVNNPLASQAAAAAAAMSSIASSQAFGNALSSLQGVTGQLVTNAQGQIIGT 346
Query: 423 FPVTPNTLPNYQSSSSTSAL 442
P+ PN P+ Q++S T L
Sbjct: 347 IPLMPNPGPSSQAASGTQGL 366
Score = 37.0 bits (84), Expect = 0.086
Identities = 90/383 (23%), Positives = 146/383 (38%), Gaps = 51/383 (13%)
Query: 522 VEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPF 581
++ + + L +LQQ Q Q+++ + Q Q+Q + ++ A S Q++ + P
Sbjct: 166 LQNLQATSSLNSQLQQLQLQLQQQQQQQQQQPPPSTNQHPQPAPQAPSQSQQQPLQPTPP 225
Query: 582 ASQVPVKRQSSSSECHPPACEAAQLQ--PLGNAHCVESSDQT-NVLSST--FLSPQCSPQ 636
P +Q PPA +QLQ P H S Q N S T SP P
Sbjct: 226 QQPPPASQQ-------PPA-PTSQLQQAPQPQQHQPHSHSQNQNQPSPTQQSSSPPQKPS 277
Query: 637 HSPLGAVKSPQHISLPPSP----NNPHFLPSSSGAQGEGHRVSSPI------SSQVCTAQ 686
SP + SP PP+P NNP +++ A SS S Q T Q
Sbjct: 278 QSPGHGLPSP---LTPPNPLQLVNNPLASQAAAAAAAMSSIASSQAFGNALSSLQGVTGQ 334
Query: 687 MAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQPPSYEDAVKQQMTRSQQMDELLDVLIE 746
+ +G +P+P SS + TQ + Q +T +Q +++ +I
Sbjct: 335 LVTNAQGQIIGTIPLMPNP---GPSSQAASGTQGLQVQPITPQLLTNAQ--GQIIATVIG 389
Query: 747 SGEMPADAREDHSCLQKVPKIPRSSRSPTAVLTKPSASF--EQASSGSQIPF-DPYATDS 803
+ +P + I S P L +PS + + AS G+ + A+ S
Sbjct: 390 NQILP---------VINTQGITLSPIKPGQQLHQPSQTSVGQAASQGNLLHLAHSQASMS 440
Query: 804 DEHLEVLLNSQSPLGKMSDVTLLKIGSEEPHFDGIMDGFSGKAAEDLFNAHEILPGPLSP 863
+ +S S S +++ ++ S G +DG + + + A +I L
Sbjct: 441 QSPVRQASSSSSSSSSSSALSVGQLVSNPQTAAGEVDGVNLEEIREFAKAFKIRRLSLGL 500
Query: 864 MQTQFSPSSVDSNGLQLSFTESP 886
QTQ G LS TE P
Sbjct: 501 TQTQV--------GQALSATEGP 515
>gi|6857826 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 43.1 bits (100), Expect = 0.001
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 117 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 176
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRRSASSG 71
Query: 177 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 235
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 236 -----AAVKSK-SLGDSKNRHKKPKDPKP 258
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|18379334 RNA-binding protein S1, serine-rich domain [Homo
sapiens]
Length = 305
Score = 43.1 bits (100), Expect = 0.001
Identities = 41/149 (27%), Positives = 62/149 (41%), Gaps = 8/149 (5%)
Query: 117 GPLELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSA 176
G E +K+ S K + ++ S +S D A +E S D D+TR +S
Sbjct: 13 GVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDR-GRDKTRKRRSASSG 71
Query: 177 GSPPDAKASDTPSTG-SLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPSTPIAVH 235
S +++S T S+G S T S S + + S S + +S + G PS H
Sbjct: 72 SSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPSRRRH 131
Query: 236 -----AAVKSK-SLGDSKNRHKKPKDPKP 258
+ KSK D K R ++ PKP
Sbjct: 132 DNRRRSRSKSKPPKRDEKERKRRSPSPKP 160
>gi|34335264 zinc finger, MYND-type containing 8 isoform c [Homo
sapiens]
Length = 1135
Score = 42.7 bits (99), Expect = 0.002
Identities = 99/527 (18%), Positives = 177/527 (33%), Gaps = 107/527 (20%)
Query: 155 EDSSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQP 214
EDS S + S+D Q S P D + + G + D+ SA +
Sbjct: 585 EDSEKSDSSDSEYISDDEQKSKNEPEDTEDKE---------------GCQMDKEPSAVKK 629
Query: 215 SHQSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQK 274
+ P+ P+ + +KS S K DP K +K
Sbjct: 630 KPK----------PTNPVEIKEELKSTSPASEK------ADPGAVKDKASPEPEKDFSEK 673
Query: 275 AEKSPPPMDSAYARLLQQQQLFLQLQILSQQQQQ------QQHRFSYLGMHQAQLKEPN- 327
A+ SP P+ + + L + S + + + H ++ + KEP+
Sbjct: 674 AKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSP 733
Query: 328 --EQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRI 385
+ + + P S++ + P +PV S QT + G V+
Sbjct: 734 KQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAA----GATATTSTSSTVTVTAPAPAA 789
Query: 386 RGLPVSGTKTALMDRLRP--------FQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSS 437
G PV + L P + +T+T + + P SS
Sbjct: 790 TGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSG 849
Query: 438 STSALSNGFYHFGSTSSSPPISPASSDL-------------SVAGSLPDTFNDASPSFGL 484
S S L S ++ PI+ AS+D+ ++ G++ + +ND
Sbjct: 850 SMSTL------VSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYND------- 896
Query: 485 HPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKL--------- 535
+S GS +E+ L E +K+ Q+ ++E+ L
Sbjct: 897 -------------LSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQ 943
Query: 536 ---QQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSS 592
Q+ R + E++ QL+ +K+ E K + A+ K+E C S Q +
Sbjct: 944 SLEQERDRLIAEVKKQLELEKQQAVDETKKKQW-CANCKKEAIFYCCWNTSYCDYPCQQA 1002
Query: 593 SSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSP 639
H +C + P A ++ T L+ + S Q +P
Sbjct: 1003 HWPEHMKSCTQSATAPQQEA---DAEVNTETLNKSSQGSSSSTQSAP 1046
>gi|34335262 zinc finger, MYND-type containing 8 isoform a [Homo
sapiens]
Length = 1188
Score = 42.7 bits (99), Expect = 0.002
Identities = 99/527 (18%), Positives = 177/527 (33%), Gaps = 107/527 (20%)
Query: 155 EDSSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQP 214
EDS S + S+D Q S P D + + G + D+ SA +
Sbjct: 610 EDSEKSDSSDSEYISDDEQKSKNEPEDTEDKE---------------GCQMDKEPSAVKK 654
Query: 215 SHQSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQK 274
+ P+ P+ + +KS S K DP K +K
Sbjct: 655 KPK----------PTNPVEIKEELKSTSPASEK------ADPGAVKDKASPEPEKDFSEK 698
Query: 275 AEKSPPPMDSAYARLLQQQQLFLQLQILSQQQQQ------QQHRFSYLGMHQAQLKEPN- 327
A+ SP P+ + + L + S + + + H ++ + KEP+
Sbjct: 699 AKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSP 758
Query: 328 --EQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRI 385
+ + + P S++ + P +PV S QT + G V+
Sbjct: 759 KQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAA----GATATTSTSSTVTVTAPAPAA 814
Query: 386 RGLPVSGTKTALMDRLRP--------FQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSS 437
G PV + L P + +T+T + + P SS
Sbjct: 815 TGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSG 874
Query: 438 STSALSNGFYHFGSTSSSPPISPASSDL-------------SVAGSLPDTFNDASPSFGL 484
S S L S ++ PI+ AS+D+ ++ G++ + +ND
Sbjct: 875 SMSTL------VSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYND------- 921
Query: 485 HPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKL--------- 535
+S GS +E+ L E +K+ Q+ ++E+ L
Sbjct: 922 -------------LSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQ 968
Query: 536 ---QQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSS 592
Q+ R + E++ QL+ +K+ E K + A+ K+E C S Q +
Sbjct: 969 SLEQERDRLIAEVKKQLELEKQQAVDETKKKQW-CANCKKEAIFYCCWNTSYCDYPCQQA 1027
Query: 593 SSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSP 639
H +C + P A ++ T L+ + S Q +P
Sbjct: 1028 HWPEHMKSCTQSATAPQQEA---DAEVNTETLNKSSQGSSSSTQSAP 1071
>gi|34335266 zinc finger, MYND-type containing 8 isoform b [Homo
sapiens]
Length = 1160
Score = 42.7 bits (99), Expect = 0.002
Identities = 99/527 (18%), Positives = 177/527 (33%), Gaps = 107/527 (20%)
Query: 155 EDSSSDGLSPDQTRSEDPQNSAGSPPDAKASDTPSTGSLGTNQDLASGSENDRNDSASQP 214
EDS S + S+D Q S P D + + G + D+ SA +
Sbjct: 610 EDSEKSDSSDSEYISDDEQKSKNEPEDTEDKE---------------GCQMDKEPSAVKK 654
Query: 215 SHQSDAGKQGLGPPSTPIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQK 274
+ P+ P+ + +KS S K DP K +K
Sbjct: 655 KPK----------PTNPVEIKEELKSTSPASEK------ADPGAVKDKASPEPEKDFSEK 698
Query: 275 AEKSPPPMDSAYARLLQQQQLFLQLQILSQQQQQ------QQHRFSYLGMHQAQLKEPN- 327
A+ SP P+ + + L + S + + + H ++ + KEP+
Sbjct: 699 AKPSPHPIKDKLKGKDETDSPTVHLGLDSDSESELVIDLGEDHSGREGRKNKKEPKEPSP 758
Query: 328 --EQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRI 385
+ + + P S++ + P +PV S QT + G V+
Sbjct: 759 KQDVVGKTPPSTTVGSHSPPETPVLTRSSAQTSAA----GATATTSTSSTVTVTAPAPAA 814
Query: 386 RGLPVSGTKTALMDRLRP--------FQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSS 437
G PV + L P + +T+T + + P SS
Sbjct: 815 TGSPVKKQRPLLPKETAPAVQRVVWNSSTVQQKEITQSPSTSTITLVTSTQSSPLVTSSG 874
Query: 438 STSALSNGFYHFGSTSSSPPISPASSDL-------------SVAGSLPDTFNDASPSFGL 484
S S L S ++ PI+ AS+D+ ++ G++ + +ND
Sbjct: 875 SMSTL------VSSVNADLPIATASADVAADIAKYTSKMMDAIKGTMTEIYND------- 921
Query: 485 HPSPVHVCTEESLMSSLNGGSVPSELDGLDSEKDKMLVEKQKVINELTWKL--------- 535
+S GS +E+ L E +K+ Q+ ++E+ L
Sbjct: 922 -------------LSKNTTGSTIAEIRRLRIEIEKLQWLHQQELSEMKHNLELTMAEMRQ 968
Query: 536 ---QQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSS 592
Q+ R + E++ QL+ +K+ E K + A+ K+E C S Q +
Sbjct: 969 SLEQERDRLIAEVKKQLELEKQQAVDETKKKQW-CANCKKEAIFYCCWNTSYCDYPCQQA 1027
Query: 593 SSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSP 639
H +C + P A ++ T L+ + S Q +P
Sbjct: 1028 HWPEHMKSCTQSATAPQQEA---DAEVNTETLNKSSQGSSSSTQSAP 1071
>gi|239754668 PREDICTED: mucin 12 [Homo sapiens]
Length = 1952
Score = 42.0 bits (97), Expect = 0.003
Identities = 85/411 (20%), Positives = 138/411 (33%), Gaps = 36/411 (8%)
Query: 388 LPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNG-- 445
LP + T + L++ P +G+P ++ T P T ++ SS TS +G
Sbjct: 300 LPDNTTTSGLLEASTPVHSSTGSPHTTLSPASSTTHEGEPTTFQSWPSSKDTSPAPSGTT 359
Query: 446 --FYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNG 503
F +T S P S ++ S + + T + S +H SPV T S
Sbjct: 360 SAFVKLSTTYHSSPSSTPTTHFSASST---TLGHSEESTPVHSSPVATATTPPPARSATS 416
Query: 504 GSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPL 563
G V + + + T E+ K + +
Sbjct: 417 GHVE---ESTAYHRSPGSTQTMHFPESSTTSGHSEESATFHGSTTHTKSSTPSTTAALAH 473
Query: 564 PFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQT-N 622
+S+ E + +S + + + S + P A + P G+ V D T +
Sbjct: 474 TSYHSSLGSTE-TTHFRDSSTISGRSEESKASHSSPDAMATTVLPAGSTPSVLVGDSTPS 532
Query: 623 VLSSTFLSPQCSPQHS--PLGAVKSPQHISLPPSPNNPHFLPS--SSGAQ---------- 668
+SS + P + P + KS S P SP+ H S SSG
Sbjct: 533 PISSGSMETTALPGSTTKPGLSEKSTTFYSSPRSPDTTHLPASMTSSGVSEESTTSHSRP 592
Query: 669 GEGHRVSSPISSQVCTAQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVT----QPPSYE 724
G H + P S+ + S GP + SP + +SS E T +P S E
Sbjct: 593 GSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFHSRPGSTE 652
Query: 725 DAVKQQMTRSQQMDELLDVLIESGEMPADAREDHSCLQKVPKIPRSSRSPT 775
+ T + +L S + + R H+ L R S T
Sbjct: 653 TTLLPDNTTAS------GLLEASMPVHSSTRSPHTTLSPAGSTTRQGESTT 697
Score = 36.6 bits (83), Expect = 0.11
Identities = 41/178 (23%), Positives = 64/178 (35%), Gaps = 25/178 (14%)
Query: 333 NPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSG 392
+P S+ T LS P S +S ++ PG L LP +
Sbjct: 1060 SPGSTDTTLS--PRSTTASSLGPESTTFHSGPGSTETTL----------------LPDNT 1101
Query: 393 TKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTS----ALSNGFYH 448
T + L++ P +G+P + T T ++ SS T ++ F
Sbjct: 1102 TASGLLEASTPVHSSTGSPRTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSAFVE 1161
Query: 449 FGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSV 506
+TS P S ++ S + + TF + S +H SPV T S S G V
Sbjct: 1162 LSTTSHGSPSSIPTTHFSASST---TFGRSEESTTVHSSPVAPATTPSPARSTTSGLV 1216
Score = 34.3 bits (77), Expect = 0.56
Identities = 90/375 (24%), Positives = 130/375 (34%), Gaps = 56/375 (14%)
Query: 589 RQSSSSECH--PPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVK-S 645
RQ S+ H P + + P + VE S ++ S+ + S + + G V+ S
Sbjct: 691 RQGESTTFHSWPSSNDTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEES 750
Query: 646 PQHISLPPSPNNPHFLPSSSGAQGEG-----------HRVSS-PISSQVCTAQMAGLHSS 693
+ S P S HF P S G G H +SS P ++ + HSS
Sbjct: 751 TTYHSSPGSTQTMHF-PESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYHSS 809
Query: 694 DKVGPKFSIPSPTFSKSSSAISEVTQPPSYEDA-----VKQQMTRSQQMDELLDVLIESG 748
G + P S +S E S +DA + + T S + E I SG
Sbjct: 810 P--GSTATTHFPDSSTTSGRSEESIASHSSQDATGTIVLPARSTNSVLLGESTTSPISSG 867
Query: 749 EMPADA----------REDHSCLQKVPKIPRSSRSPTAVLTKPSASFEQASSGSQIPFDP 798
M A E + P+ P ++ SP + T S E++++ P
Sbjct: 868 SMETTALPGSTTTPGLSERSTTFHSSPRSPATTLSPAS--TTSSGVSEESTTSHSRPGST 925
Query: 799 YATD-SDEHLEVLLNSQSPLGKMS----DVTLLKIGSE-----EPHFDGIMDGF------ 842
+ T D L+ S S D TLL + EP I G
Sbjct: 926 HTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTXLVGEPTTSPISSGSTETTAL 985
Query: 843 --SGKAAEDLFNAHEILPGPLSPMQTQFSPSSVDSNGLQLSFTESPWETMEWLDLTPPNS 900
S A + P SP T SP+S S+G+ T S P S
Sbjct: 986 PGSTTTAGLSEKSTTFYSSPRSP-DTTLSPASTTSSGVSEESTTSHSRPGSTHTTAFPGS 1044
Query: 901 T--PGFSALTTSSPS 913
T PG S +T+S S
Sbjct: 1045 TTMPGVSQESTASHS 1059
>gi|239743293 PREDICTED: mucin 12 [Homo sapiens]
Length = 5478
Score = 41.6 bits (96), Expect = 0.004
Identities = 85/411 (20%), Positives = 138/411 (33%), Gaps = 36/411 (8%)
Query: 388 LPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNG-- 445
LP + T + L++ P +G+P ++ T P T ++ SS TS +G
Sbjct: 379 LPDNTTTSGLLEASTPVHSSTGSPHTTLSPSSSTTHEGEPTTFQSWPSSKDTSPAPSGTT 438
Query: 446 --FYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNG 503
F +T S P S ++ S + + T + S +H SPV T S
Sbjct: 439 SAFVKLSTTYHSSPSSTPTTHFSASST---TLGHSEESTPVHSSPVATATTPPPARSATS 495
Query: 504 GSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPL 563
G V + + + T E+ K + +
Sbjct: 496 GHVE---ESTAYHRSPGSTQTMHFPESSTTSGHSEESATFHGSTTHTKSSTPSTTAALAH 552
Query: 564 PFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQT-N 622
+S+ E + +S + + + S + P A + P G+ V D T +
Sbjct: 553 TSYHSSLGSTE-TTHFRDSSTISGRSEESKASHSSPDAMATTVLPAGSTPSVLVGDSTPS 611
Query: 623 VLSSTFLSPQCSPQHS--PLGAVKSPQHISLPPSPNNPHFLPS--SSGAQ---------- 668
+SS + P + P + KS S P SP+ H S SSG
Sbjct: 612 PISSGSMETTALPGSTTKPGLSEKSTTFYSSPRSPDTTHLPASMTSSGVSEESTTSHSRP 671
Query: 669 GEGHRVSSPISSQVCTAQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVT----QPPSYE 724
G H + P S+ + S GP + SP + +SS E T +P S E
Sbjct: 672 GSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFHSRPGSTE 731
Query: 725 DAVKQQMTRSQQMDELLDVLIESGEMPADAREDHSCLQKVPKIPRSSRSPT 775
+ T + +L S + + R H+ L R S T
Sbjct: 732 TTLLPDNTTAS------GLLEASMPVHSSTRSPHTTLSPAGSTTRQGESTT 776
Score = 35.8 bits (81), Expect = 0.19
Identities = 40/178 (22%), Positives = 63/178 (35%), Gaps = 25/178 (14%)
Query: 333 NPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSG 392
+P S+ T LS P S +S ++ PG L LP +
Sbjct: 1753 SPGSTDTTLS--PGSTTASSLGPESTTFHSSPGSTETTL----------------LPDNT 1794
Query: 393 TKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTS----ALSNGFYH 448
T + L++ P +G+P + T T ++ SS T ++ F
Sbjct: 1795 TASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPSSKDTMPAPPTTTSAFVE 1854
Query: 449 FGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSV 506
+TS P S ++ S + + T + S +H SPV T S S G V
Sbjct: 1855 LSTTSHGSPSSTPTTHFSASST---TLGRSEESTTVHSSPVATATTPSPARSTTSGLV 1909
Score = 35.8 bits (81), Expect = 0.19
Identities = 94/481 (19%), Positives = 155/481 (32%), Gaps = 68/481 (14%)
Query: 63 SLKRKARNRCNSADLVNMHILQASTAERSIP------TAQMKLKRARLADDLNEKIALRP 116
S R + A + ++ + + ST RS P + L+++ + P
Sbjct: 2332 SSPRSPTTTLSPASMTSLGVGEESTTSRSQPGSTHSTVSPASTTTPGLSEESTTVYSSSP 2391
Query: 117 GPLELVEKNILPVDSAVKEAIKGNQV----SFSKSTDAFAFEEDSSSDGLSPDQTRSEDP 172
G E P S ++G + S ST F EDS++ GL+ + T
Sbjct: 2392 GSTETTVFPRTPTTS-----VRGEEPTTFHSRPASTHTTLFTEDSTTSGLTEESTAFP-- 2444
Query: 173 QNSAGSPPDAKAS--DTPSTGSLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPPST 230
GSP + T +T LG S + S P+ + +G G PS
Sbjct: 2445 ----GSPASTQTGLPATLTTADLGEESTTFPSSSGSTGTTLS-PARSTTSGLVGESTPSR 2499
Query: 231 PIAVHAAVKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLL 290
S S ++ P P K ++ SP D+ +
Sbjct: 2500 --------LSPSSTETTTLPGSPTTPSLSEKSTTFYT----------SPRSPDATLSPAT 2541
Query: 291 QQQQLFLQLQILSQQQQQQQHRFSYLGMHQAQ-LKEPNEQMVRNPNSSST---PLSNTPL 346
+ S Q H ++ L + +P S+ T P S T
Sbjct: 2542 TTSSGVSEESSTSHSQPGSTHTTAFPDSTTTPGLSRHSTTSHSSPGSTDTTLLPASTTTS 2601
Query: 347 SPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRG-------LPVSGTKTALMD 399
P + S + + S P + L + P S T + +++
Sbjct: 2602 GPSQESTTSHSSPGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTLFPDSTTSSGIVE 2661
Query: 400 RLRPFQDCSGNPVPNF-----------GDITTV-TFPVTPNTLPNYQSSSSTSALSNGFY 447
+G+P G+ TT T P + +T P+ S+++ + Y
Sbjct: 2662 ASTRVHSSTGSPRTTLSPASSTSPGLQGESTTFQTHPASTHTTPSPPSTATAPVEESTTY 2721
Query: 448 HFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTE---ESLMSSLNGG 504
H S+ PASS S F+ + + G PS H T ES S ++ G
Sbjct: 2722 HRSPGSTPTTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSGRGESTTSRISPG 2781
Query: 505 S 505
S
Sbjct: 2782 S 2782
Score = 35.4 bits (80), Expect = 0.25
Identities = 39/178 (21%), Positives = 64/178 (35%), Gaps = 25/178 (14%)
Query: 333 NPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSG 392
+P S+ T LS P S +S ++ PG L LP +
Sbjct: 4393 SPGSTDTTLS--PGSTTASSLGPESTTFHSSPGSTETTL----------------LPDNT 4434
Query: 393 TKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTS----ALSNGFYH 448
T + L++ P +G+P + T T ++ +S T+ ++ F
Sbjct: 4435 TASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPNSKDTTPAPPTTTSAFVE 4494
Query: 449 FGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGSV 506
+TS P S ++ S + + T + S +H SPV T S S G V
Sbjct: 4495 LSTTSHGSPSSTPTTHFSASST---TLGRSEESTTVHSSPVATATTPSPARSTTSGLV 4549
Score = 34.7 bits (78), Expect = 0.43
Identities = 28/123 (22%), Positives = 48/123 (39%), Gaps = 7/123 (5%)
Query: 388 LPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTS----ALS 443
LP + T + L++ P +G+P + T T ++ +S T+ +
Sbjct: 3347 LPDNTTASGLLEASTPVHSSTGSPHTTLSPAGSTTRQGESTTFQSWPNSKDTTPAPPTTT 3406
Query: 444 NGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNG 503
+ F +TS P S ++ S + + T + S +H SPV T S S
Sbjct: 3407 SAFVELSTTSHGSPSSTPTTHFSASST---TLGRSEESTTVHSSPVATATTPSPARSTTS 3463
Query: 504 GSV 506
G V
Sbjct: 3464 GLV 3466
Score = 34.3 bits (77), Expect = 0.56
Identities = 58/235 (24%), Positives = 86/235 (36%), Gaps = 34/235 (14%)
Query: 589 RQSSSSECH--PPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVK-S 645
RQ S+ H P + + P + VE S ++ S+ + S + + G V+ S
Sbjct: 770 RQGESTTFHSWPSSKDTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEES 829
Query: 646 PQHISLPPSPNNPHFLPSSSGAQGEG-----------HRVSS-PISSQVCTAQMAGLHSS 693
+ S P S HF P S G G H +SS P ++ + HSS
Sbjct: 830 TTYHSSPGSTQTMHF-PESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYHSS 888
Query: 694 DKVGPKFSIPSPTFSKSSSAISEVTQPPSYEDA-----VKQQMTRSQQMDELLDVLIESG 748
G + P S +S E T S +DA + + T S + E I SG
Sbjct: 889 P--GSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTTSVLLGESTTSPISSG 946
Query: 749 EMPADA----------REDHSCLQKVPKIPRSSRSPTAVLTKPSASFEQASSGSQ 793
M A E + P+ P ++ SP A T S E +S S+
Sbjct: 947 SMETTALPGSTTTPGLSERSTTFHSSPRSPATTLSP-ASTTSSGVSEESTTSRSR 1000
Score = 33.1 bits (74), Expect = 1.2
Identities = 40/193 (20%), Positives = 67/193 (34%), Gaps = 31/193 (16%)
Query: 328 EQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRG 387
E + +S ST + +P S SF ++ PG L
Sbjct: 1049 ESTTSHSSSGSTDTALSPGSTTALSFGQESTTFHSNPGSTHTTL---------------- 1092
Query: 388 LPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTV------------TFPVTPNTLPNYQS 435
P S T + +++ +G+P ++ T P + +T P+ S
Sbjct: 1093 FPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPPS 1152
Query: 436 SSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTE- 494
+++ + YH S+ PASS S F+ + + G PS H T
Sbjct: 1153 TATAPVEESTTYHRSPGSTPTTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSG 1212
Query: 495 --ESLMSSLNGGS 505
ES S ++ GS
Sbjct: 1213 RGESTTSRISPGS 1225
Score = 33.1 bits (74), Expect = 1.2
Identities = 40/193 (20%), Positives = 67/193 (34%), Gaps = 31/193 (16%)
Query: 328 EQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRG 387
E + +S ST + +P S SF ++ PG L
Sbjct: 3689 ESTTSHSSSGSTDTALSPGSTTALSFGQESTTFHSSPGSTHTTL---------------- 3732
Query: 388 LPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTV------------TFPVTPNTLPNYQS 435
P S T + +++ +G+P ++ T P + +T P+ S
Sbjct: 3733 FPDSTTSSGIVEASTRVHSSTGSPRTTLSPASSTSPGLQGESTAFQTHPASTHTTPSPPS 3792
Query: 436 SSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTE- 494
+++ + YH S+ PASS S F+ + + G PS H T
Sbjct: 3793 TATAPVEESTTYHRSPGSTPTTHFPASSTTSGHSEKSTIFHSSPDASGTTPSSAHSTTSG 3852
Query: 495 --ESLMSSLNGGS 505
ES S ++ GS
Sbjct: 3853 RGESTTSRISPGS 3865
Score = 32.3 bits (72), Expect = 2.1
Identities = 24/87 (27%), Positives = 37/87 (42%), Gaps = 3/87 (3%)
Query: 422 TFPVTPNTLPNYQSSSSTSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPS 481
T P + +T P+ S+++ + YH S+ PASS S F+ + +
Sbjct: 2222 THPASTHTTPSPPSTATAPVEESTTYHRSPGSTPTTHFPASSTTSGHSEKSTIFHSSPDA 2281
Query: 482 FGLHPSPVHVCTE---ESLMSSLNGGS 505
G PS H T ES S ++ GS
Sbjct: 2282 SGTTPSSAHSTTSGRGESTTSRISPGS 2308
>gi|239749217 PREDICTED: similar to Mucin-12, partial [Homo sapiens]
Length = 861
Score = 41.2 bits (95), Expect = 0.005
Identities = 86/412 (20%), Positives = 139/412 (33%), Gaps = 38/412 (9%)
Query: 388 LPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSALSNG-- 445
LP + T + L++ P +G+P ++ T P T ++ SS TS +G
Sbjct: 235 LPDNTTTSGLLEASTPVHSSTGSPHTTLSPSSSTTHEGEPTTFQSWPSSKDTSPAPSGTT 294
Query: 446 --FYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNG 503
F +T S P S ++ S + + T + S +H SPV T S
Sbjct: 295 SAFVKLSTTYHSSPSSTPTTHFSASST---TLGHSEESTPVHSSPVATATTPPPARSATS 351
Query: 504 GSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPL 563
G V + + + T E+ K + +
Sbjct: 352 GHVE---ESTAYHRSPGSTQTMHFPESSTTSGHSEESATFHGSTTHTKSSTPSTTAALAH 408
Query: 564 PFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQT-N 622
+S+ E + +S + + + S + P A + P G+ V D T +
Sbjct: 409 TSYHSSLGSTE-TTHFRDSSTISGRSEESKASHSSPDAMATTVLPAGSTPSVLVGDSTPS 467
Query: 623 VLSSTFLSPQCSPQHS--PLGAVKSPQHISLPPSPNNPHFLP---SSSGAQ--------- 668
+SS + P + P + KS S P SP+ H LP +SSG
Sbjct: 468 PISSGSMETTALPGSTTKPGLSEKSTTFYSSPRSPDTTH-LPARMTSSGVSEESTTSHSR 526
Query: 669 -GEGHRVSSPISSQVCTAQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVT----QPPSY 723
G H + P S+ + S GP + SP + +SS E T P S
Sbjct: 527 PGSTHTTAFPGSTTMPGLSQESTASHSSPGPTDTTLSPGSTTASSLGPEYTTFHSSPGST 586
Query: 724 EDAVKQQMTRSQQMDELLDVLIESGEMPADAREDHSCLQKVPKIPRSSRSPT 775
E + T + +L S + + R H+ L R S T
Sbjct: 587 ETTLLPDNTTAS------GLLEASTPVHSSTRSPHTTLSPAGSTTRQGESTT 632
Score = 34.7 bits (78), Expect = 0.43
Identities = 58/235 (24%), Positives = 86/235 (36%), Gaps = 34/235 (14%)
Query: 589 RQSSSSECH--PPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVK-S 645
RQ S+ H P + + P + VE S ++ S+ + S + + G V+ S
Sbjct: 626 RQGESTTFHSWPSSKDTRPAPPTTTSAFVEPSTTSHGSPSSIPTTHISARSTTSGLVEES 685
Query: 646 PQHISLPPSPNNPHFLPSSSGAQGEG-----------HRVSS-PISSQVCTAQMAGLHSS 693
+ S P S HF P S G G H +SS P ++ + HSS
Sbjct: 686 TTYHSSPGSTQTMHF-PESDTTSGRGEESTTSHSSTTHTISSAPSTTSALVEEPTSYHSS 744
Query: 694 DKVGPKFSIPSPTFSKSSSAISEVTQPPSYEDA-----VKQQMTRSQQMDELLDVLIESG 748
G + P S +S E T S +DA + + T S + E I SG
Sbjct: 745 P--GSTATTHFPDSSTTSGRSEESTASHSSQDATGTIVLPARSTNSVLLGESTTSPISSG 802
Query: 749 EMPADA----------REDHSCLQKVPKIPRSSRSPTAVLTKPSASFEQASSGSQ 793
M A E + P+ P ++ SP A T S E +S S+
Sbjct: 803 SMETTALPGSTTTPGLSERSTTFHSSPRSPATTLSP-ASTTSSGVSEESTTSHSR 856
>gi|22035604 mitogen-activated protein kinase kinase kinase kinase 4
isoform 2 [Homo sapiens]
Length = 1320
Score = 41.2 bits (95), Expect = 0.005
Identities = 66/280 (23%), Positives = 109/280 (38%), Gaps = 44/280 (15%)
Query: 519 KMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEEAVSS 578
+ L+++Q ++ E W+ +E RQ E L+ QLQ+++ S Q +
Sbjct: 484 QQLLQEQAMLLECRWREMEEHRQAERLQRQLQQEQAYLLS------------LQHDHRRP 531
Query: 579 CPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHS 638
P SQ P Q S+ P+ A P AH E +D+ + F S S
Sbjct: 532 HPQHSQQPPPPQQERSK---PSFHA----PEPKAH-YEPADRAREVEDRFRKTNHS---S 580
Query: 639 PLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQMAGLHSSDKVGP 698
P K + PP P+ S+ ++ + P QV + +A L + V P
Sbjct: 581 PEAQSKQTGRVLEPPVPSRSESF-SNGNSESVHPALQRPAEPQVQWSHLASL--KNNVSP 637
Query: 699 -----KFSIPSPTFSKSSSAISEVTQPPSYEDAVKQQMTRSQQMDELLDVLIESGEMPAD 753
FS PSP F+ S+ PPS RS+ + + D E+ +
Sbjct: 638 VSRSHSFSDPSPKFAHHHLR-SQDPCPPS----------RSEVLSQSSDSKSEAPDPTQK 686
Query: 754 AREDHSCLQKVPKIPRSSRSPTAVLTKPSASFEQASSGSQ 793
A + P++P + S + VL++ + + SG Q
Sbjct: 687 AWSRSDSDEVPPRVPVRTTSRSPVLSRRDSPLQ--GSGQQ 724
Score = 38.5 bits (88), Expect = 0.030
Identities = 79/343 (23%), Positives = 129/343 (37%), Gaps = 34/343 (9%)
Query: 517 KDKMLVEKQKVIN---ELTWKLQQEQRQVEELRMQLQK-QKRNNCSEKKPLPFLAASIKQ 572
K ++L E+QK I E +L+++QR+ E R Q ++ Q+R EK+ L L K+
Sbjct: 388 KRQLLAERQKRIEQQKEQRRRLEEQQRREREARRQQEREQRRREQEEKRRLEELERRRKE 447
Query: 573 EEAVSSCP------FASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSS 626
EE Q ++RQ + H + LQ + +
Sbjct: 448 EEERRRAEEEKRRVEREQEYIRRQLEEEQRHLEVLQQQLLQEQAMLLECRWREMEEHRQA 507
Query: 627 TFLSPQCSPQHSPLGAVK------SPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISS 680
L Q + + L +++ PQH PP P PS + + H + +
Sbjct: 508 ERLQRQLQQEQAYLLSLQHDHRRPHPQHSQQPPPPQQERSKPSFHAPEPKAHYEPADRAR 567
Query: 681 QVCTAQMAGLHS-----SDKVGPKFSIPSPTFSKS-SSAISEVTQPPSYEDAVKQ-QMTR 733
+V HS S + G P P+ S+S S+ SE P A Q Q +
Sbjct: 568 EVEDRFRKTNHSSPEAQSKQTGRVLEPPVPSRSESFSNGNSESVHPALQRPAEPQVQWSH 627
Query: 734 SQQMDELLDVLIESGEM--PADAREDHSCLQKVPKIPRSSRSPTAVLTKPSASFEQASSG 791
+ + + S P+ H + P P S + VL++ S S +A
Sbjct: 628 LASLKNNVSPVSRSHSFSDPSPKFAHHHLRSQDPCPP----SRSEVLSQSSDSKSEAPDP 683
Query: 792 SQIPFDPYATDSDE---HLEVLLNSQSPLGKMSDVTLLKIGSE 831
+Q + +DSDE + V S+SP+ D L G +
Sbjct: 684 TQKAWS--RSDSDEVPPRVPVRTTSRSPVLSRRDSPLQGSGQQ 724
>gi|124430752 kinesin family member 26B [Homo sapiens]
Length = 2108
Score = 40.8 bits (94), Expect = 0.006
Identities = 85/377 (22%), Positives = 135/377 (35%), Gaps = 35/377 (9%)
Query: 534 KLQQEQRQVEELRMQLQKQKRN--NCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQS 591
K + + R E K +R+ C+ L I E SS PF ++P +
Sbjct: 898 KTRGDSRPAEAGEAAAGKSERDCLKCNTFAELQERLDCIDGSEEPSSFPF-EELPAQFGP 956
Query: 592 SSSECHPPACEAAQLQPLGNAHCVESSDQ---TNVLSSTFLSPQCSPQHSPLGAVKSPQH 648
+ P +AA PL + ++ + TN + + HSP+ A +P H
Sbjct: 957 EQASRGPRLSQAAGASPLSESDKEDNGSEGQLTNREGPELPASKMQRSHSPVPAA-APAH 1015
Query: 649 ISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQMAGLHSSDKV-GPKFSIPSPTF 707
PSP +P +P SS H S + S + L+S V G + SP
Sbjct: 1016 ---SPSPASPRSVPGSSSQ----HSASPLVQSPSLQSSRESLNSCGFVEGKPRPMGSPRL 1068
Query: 708 SKSSSAISEVTQPPSYEDAVKQQMTRSQQMDELLDVLIESGEMPADAREDHSCLQKVPKI 767
+S + + +PPS + T+ + + S + +RE S LQ +
Sbjct: 1069 GIASLSKTSEYKPPSSPSQRCKVYTQKGVLPSPAPLPPSSKDSGVASRE--SLLQPEVRT 1126
Query: 768 PRSSRSPTAVLTKPSASFEQASSGSQIPFDPYATDSDEHLEVL----LNSQSPLGKMSDV 823
P SP + SA E AT S+ E+L + Q PL +
Sbjct: 1127 PPVGMSPQVLKKSMSAGSEGFPETPVDDEQQAATPSESKKEILSTTMVTVQQPLELNGED 1186
Query: 824 TLLKIGSEEPHFDGIMDGFSGKAAEDLFNAHEILPGPLSPMQTQFSPSSVDSNGLQLSFT 883
L+ EE G++D SG+ P + + S ++ S +S
Sbjct: 1187 ELVFTLVEELTISGVLD--SGR------------PTSIISFNSDCSARALASGSRPVSII 1232
Query: 884 ESPWETMEWLDLTPPNS 900
S E +E T P S
Sbjct: 1233 SSISEDLECYSSTAPVS 1249
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 40.4 bits (93), Expect = 0.008
Identities = 85/424 (20%), Positives = 149/424 (35%), Gaps = 43/424 (10%)
Query: 331 VRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPV 390
+ P+ STPL++ P+S + + +S+ P + +VS +P+
Sbjct: 3038 ISTPSEGSTPLTSIPVSTTPVAIPEASTLSTTPVDSNSPVVTSTEVSSSPTPAEGTSMPI 3097
Query: 391 SGTKTALMDRLRPFQDC--SGNPVPNFGDITTVTFPV---TPNTLPNYQSSSSTSALSNG 445
S + P S PV + T T PV TP T SS T++
Sbjct: 3098 S----TYSEGSTPLTGVPVSTTPVTSSAISTLSTTPVDTSTPVTTSTEAHSSPTTSEGTS 3153
Query: 446 FYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLMSSLNGGS 505
+ S P++ + S D+ A+P +PV TE + ++ G S
Sbjct: 3154 MPTSTPSEGSTPLTYMPVSTMLVVSSEDSTLSATPVDT--STPVTTSTEATSSTTAEGTS 3211
Query: 506 VPSEL--DGL--------------DSEKDKMLVEKQKVINELTWKLQQEQRQ--VEELRM 547
+P+ +G+ SE + LT + E M
Sbjct: 3212 IPTSTPSEGMTPLTSVPVSNTPVASSEASILSTTPVDSNTPLTTSTEASSSPPTAEGTSM 3271
Query: 548 QLQKQKRNNCS-EKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPACEAAQL 606
+ P+ + + +S+ P + PV S +S PP + +
Sbjct: 3272 PTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADTSTPVTTYSQASSS-PPIADGTSM 3330
Query: 607 QPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGA--------VKSPQHISLPPSPNNP 658
+ + S+ TN+ ST +P S + S L V + SL P+
Sbjct: 3331 PT--STYSEGSTPLTNMSFST--TPVVSSEASTLSTTPVDTSTPVTTSTEASLSPTTAEG 3386
Query: 659 HFLPSSSGAQGEGHRVSSPISSQVCTAQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVT 718
+P+SS ++G S P+S+ + S+ V + + T + SS I+E T
Sbjct: 3387 TSIPTSSPSEGTTPLASMPVSTTPVVSSEVNTLSTTPVDSNTLVTTSTEASSSPTIAEGT 3446
Query: 719 QPPS 722
P+
Sbjct: 3447 SLPT 3450
Score = 40.0 bits (92), Expect = 0.010
Identities = 122/602 (20%), Positives = 211/602 (35%), Gaps = 84/602 (13%)
Query: 333 NPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKP---------GPLPPNLDDLKVSELR-QQ 382
+P +S PLS TP++ + S T V S P P+P ++ S ++
Sbjct: 2101 SPLLTSIPLSTTPVASPEASTLSTTPVDSNSPVITSTEVSSSPIPTEGTSMQTSTYSDRR 2160
Query: 383 LRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSSSTSAL 442
+ +PVS T A S PV +T T + T +S TS
Sbjct: 2161 TPLTSMPVSTTVVASS----AISTLSTTPVDTSTPVTNSTEARSSPTTSE-GTSMPTSTP 2215
Query: 443 SNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEE-SLMSSL 501
S G F +S P+S S A +L T D S +PV TE S ++
Sbjct: 2216 SEGSTPF----TSMPVSTMPVVTSEASTLSATPVDTS-------TPVTTSTEATSSPTTA 2264
Query: 502 NGGSVPSELDGLDSEKDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKK 561
G S+P+ ++E T L
Sbjct: 2265 EGTSIPTS-----------------TLSEGTTPLTSI----------------------- 2284
Query: 562 PLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPACEAAQLQPL----GNAHCVES 617
P+ + + +S+ P S P + +S PP E + GN
Sbjct: 2285 PVSHTLVANSEVSTLSTTPVDSNTPFTTSTEASS-PPPTAEGTSMPTSTSSEGNTPLTRM 2343
Query: 618 SDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSP 677
T +++S S + V + P+ + +P+S+ ++G S P
Sbjct: 2344 PVSTTMVASFETSTLSTTPADTSTPVTTYSQAGSSPTTADDTSMPTSTYSEGSTPLTSVP 2403
Query: 678 ISSQVCTAQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQPPSYEDAVKQQMTRSQQM 737
+S+ + A HS+ V + + T + SS +E T P+ + S +
Sbjct: 2404 VSTMPVVSSEASTHSTTPVDTSTPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPV 2463
Query: 738 DELLDVLIESGEMPADAREDHSCLQKVPKIPRSSRSPTAVLTKPSASFEQASSGSQIPFD 797
V E+G + + + + + S + ++ S + E ++ + IP
Sbjct: 2464 STTPVVSSEAGTLSTTPVDTSTPMTTSTEASSSPTTAEDIVVPISTASEGSTLLTSIPVS 2523
Query: 798 --PYATDSDEHLEVL-LNSQSPLGKMSDVTLLKIGSEEPHFDGI-MDGFSGKAAEDLFNA 853
P A+ L ++S SP+ VT +I S +G M + +
Sbjct: 2524 TTPVASPEASTLSTTPVDSNSPV-----VTSTEISSSATSAEGTSMPTSTYSEGSTPLRS 2578
Query: 854 HEILPGPLSPMQ-TQFSPSSVDSNGLQLSFTESPWETMEWLDLTPPNSTPGFSALTTSSP 912
+ PL+ + + S + VD++ + TE+ D + P STP S ++TS
Sbjct: 2579 MPVSTKPLASSEASTLSTTPVDTSIPVTTSTETSSSPTTAKDTSMPISTP--SEVSTSLT 2636
Query: 913 SI 914
SI
Sbjct: 2637 SI 2638
Score = 39.3 bits (90), Expect = 0.017
Identities = 90/421 (21%), Positives = 149/421 (35%), Gaps = 42/421 (9%)
Query: 334 PNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLRIRGLPVSGT 393
P+ +TPL++TP+S + S + +S+ P + S +P S
Sbjct: 978 PSEGTTPLTSTPVSHTLVANSEASTLSTTPVDSNTPLTTSTEASSPPPTAEGTSMPTSTP 1037
Query: 394 KTALMDRLRPFQDCSGNPVPNFGDITTVTFPV---TPNTLPNYQSSSSTSA----LSNGF 446
R S V + T T P TP T + SSSST+A +
Sbjct: 1038 SEGSTPLTR--MPVSTTMVASSETSTLSTTPADTSTPVTTYSQASSSSTTADGTSMPTST 1095
Query: 447 YHFGSTS-SSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLM-SSLNGG 504
Y GST +S P+S S A +L T D S PV TE S ++ G
Sbjct: 1096 YSEGSTPLTSVPVSTRLVVSSEASTLSTTPVDTS-------IPVTTSTEASSSPTTAEGT 1148
Query: 505 SVPSELDG-----LDSEKDKMLVEKQKVINELTWKLQQEQRQV-------------EELR 546
S+P+ L S + N L+ + QV E
Sbjct: 1149 SIPTSPPSEGTTPLASMPVSTTLVVSSEANTLSTTPVDSKTQVATSTEASSPPPTAEVTS 1208
Query: 547 MQLQKQ-KRNNCSEKKPLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPACEAAQ 605
M +R+ P+ + + +S+ P + PV + +S P E
Sbjct: 1209 MPTSTPGERSTPLTSMPVRHTPVASSEASTLSTSPVDTSTPVTTSAETSSS-PTTAEGTS 1267
Query: 606 LQPL----GNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHFL 661
L G+ T +++S S + G V + +S P+P +
Sbjct: 1268 LPTSTTSEGSTLLTSIPVSTTLVTSPEASTLLTTPVDTKGPVVTSNEVSSSPTPAEGTSM 1327
Query: 662 PSSSGAQGEGHRVSSPISSQVCTAQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQPP 721
P+S+ ++G S P+++ + + + S+ V + + T + SS SE T P
Sbjct: 1328 PTSTYSEGRTPLTSIPVNTTLVASSAISILSTTPVDNSTPVTTSTEACSSPTTSEGTSMP 1387
Query: 722 S 722
+
Sbjct: 1388 N 1388
Score = 36.6 bits (83), Expect = 0.11
Identities = 125/638 (19%), Positives = 212/638 (33%), Gaps = 106/638 (16%)
Query: 120 ELVEKNILPVDSAVKEAIKGNQVSFSKSTDAFAFEEDSSSDGLSPDQTRSEDPQNSAGSP 179
E+ +I PVD++ S + +A + + S+G +P A S
Sbjct: 350 EMSTLSITPVDTSTLVTTSTEPSSLPTTAEATSMLTSTLSEGSTPLTNMPVSTILVASSE 409
Query: 180 PDAKASDTPSTGSLGTNQDLASGSENDRNDSASQPSHQSDAGKQGLGPP--STPIAVHAA 237
++ + + T AS S D++ S S+ P +TP+A
Sbjct: 410 ASTTSTIPVDSKTFVTTASEASSSPTTAEDTSIATSTPSEGSTPLTSMPVSTTPVAS--- 466
Query: 238 VKSKSLGDSKNRHKKPKDPKPKVKKLKYHQYIPPDQKAEKSPPPMDSAYARLLQQQQLFL 297
++ N P D K +V PP + P S + L +
Sbjct: 467 ------SEASNLSTTPVDSKTQVTTSTEASSSPPTAEVNSMPTSTPSEGSTPLTSMSVST 520
Query: 298 ------QLQILSQQQQQQQHRFSYLGMHQAQLKEPNEQMV--RNPNSSSTPLSNTPLSPV 349
+ LS + + P + P+ STPL+N P+S
Sbjct: 521 MPVASSEASTLSTTPVDTSTPVTTSSEASSSSTTPEGTSIPTSTPSEGSTPLTNMPVS-T 579
Query: 350 KNSFSGQTGVSSFKPGPLPPNLD-DLKVSELRQQLRIRGLPVS-----GTKTALMDRLRP 403
+ S + +S P + + S +P S GT M
Sbjct: 580 RLVVSSEASTTSTTPADSNTFVTTSSEASSSSTTAEGTSMPTSTYSERGTTITSMS---- 635
Query: 404 FQDCSGNPVPNFGDITTVTFPV---TPNTLPNYQSSSSTSA----LSNGFYHFGSTS-SS 455
S V + T T PV TP T +SSST+A + Y GST +S
Sbjct: 636 ---VSTTLVASSEASTLSTTPVDSNTPVTTSTEATSSSTTAEGTSMPTSTYTEGSTPLTS 692
Query: 456 PPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLM-SSLNGGSVPSELDGLD 514
P++ S A +L T D S +PV TE S ++ +G S+P+
Sbjct: 693 MPVNTTLVASSEASTLSTTPVDTS-------TPVTTSTEASSSPTTADGASMPTSTPSEG 745
Query: 515 SEKDKMLVEKQKVINELTWKLQQEQRQVEELRMQLQKQKRNNCSEKKPLPFLAASIKQEE 574
S LT P+ + +
Sbjct: 746 S-------------TPLT---------------------------SMPVSKTLLTSSEAS 765
Query: 575 AVSSCPFASQVPVKRQSSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSS--TFLSPQ 632
+S+ P + + + +S C P E + P+ S+ + +L+S ++P
Sbjct: 766 TLSTTPLDTSTHITTSTEAS-CSPTTTEGTSM-PISTP-----SEGSPLLTSIPVSITPV 818
Query: 633 CSPQHSPLGA--------VKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCT 684
SP+ S L V + +S P+P +P+S+ ++G S P+S+ +
Sbjct: 819 TSPEASTLSTTPVDSNSPVTTSTEVSSSPTPAEGTSMPTSTYSEGRTPLTSMPVSTTLVA 878
Query: 685 AQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQPPS 722
S+ V + + T ++SS SE T P+
Sbjct: 879 TSAISTLSTTPVDTSTPVTNSTEARSSPTTSEGTSMPT 916
Score = 35.0 bits (79), Expect = 0.33
Identities = 116/621 (18%), Positives = 210/621 (33%), Gaps = 59/621 (9%)
Query: 333 NPNSSSTPLSNTPLS---------------PVKNSFSGQTGVSSFKPGPLPPNLDDLKVS 377
NP+ +TPL++ P+S PV S G T + + +
Sbjct: 1390 NPSEGTTPLTSIPVSTTPVVSSEASTLSATPVDTSTPGTTSAEATSSPTTAEGISIPTST 1449
Query: 378 ELRQQLRIRGLPVSGTKTALMDRLRPFQDCSGNPVPNFGDITTVTFPVTPNTLPNYQSSS 437
+ ++ +PVS T A + S PV + + T T V+ + P +S
Sbjct: 1450 PSEGKTPLKSIPVSNTPVANSEA----STLSTTPVDSNSPVVTST-AVSSSPTPAEGTSI 1504
Query: 438 STSALSNGFYHFGS------TSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHV 491
+ S S G S T +S I+ S+ +V + T++ AS S P
Sbjct: 1505 AISTPSEGSTALTSIPVSTTTVASSEINSLSTTPAVTSTPVTTYSQASSS------PTTA 1558
Query: 492 CTEESLMSSLNGGSVP------SELDGLDSEKDKMLVEKQKVINELTWKLQQEQRQVEEL 545
S+ + GS P S + + SE + + ++T + E
Sbjct: 1559 DGTSMQTSTYSEGSTPLTSLPVSTMLVVSSEANTLSTTPIDSKTQVTASTEASSSTTAEG 1618
Query: 546 RMQLQKQKRNNCSEKKPLPFLAASIKQEEA--VSSCPFASQVPVKRQSSSSECHPPACEA 603
+P + EA +S+ P S PV + S PA E
Sbjct: 1619 SSMTISTPSEGSPLLTSIPVSTTPVASPEASTLSTTPVDSNSPVITSTEVSSSPTPA-EG 1677
Query: 604 AQLQPL----GNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPH 659
+ G + +T ++S+ +S + V + P+ +
Sbjct: 1678 TSMPTSTYTEGRTPLTSITVRTTPVASSAISTLSTTPVDNSTPVTTSTEARSSPTTSEGT 1737
Query: 660 FLPSSSGAQGEGHRVSSPISSQVCTAQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQ 719
+P+S+ ++G S P+S+ + A S+ + + + T + SS +E T
Sbjct: 1738 SMPNSTPSEGTTPLTSIPVSTTPVLSSEASTLSATPIDTSTPVTTSTEATSSPTTAEGTS 1797
Query: 720 PPSYEDAVKQQMTRSQQMDELLDVLIESGEMPADAREDHSCLQKVPKIPRSSRSPTAVLT 779
P+ + S + L E+ + + +S V S SPT
Sbjct: 1798 IPTSTLSEGMTPLTSTPVSHTLVANSEASTLSTTPVDSNS---PVVTSTAVSSSPTPAEG 1854
Query: 780 KPSASFEQASSGSQIPFDPYATDSDEHLEVLLNSQSPLGKMSDVTLLKIGSEEPHFDGIM 839
A+ + + + P +T + E S +P + VT S P
Sbjct: 1855 TSIATSTPSEGSTALTSIPVSTTTVASSETNTLSTTPAVTSTPVTTYAQVSSSP---TTA 1911
Query: 840 DGFSGKAAEDLFNAHEILPGPLSPMQTQFSPSSVDSNGLQLSFTESPWETMEWLDLTPPN 899
DG S + + P+S T + S +++ L+ T +P T +P
Sbjct: 1912 DGSSMPTSTPREGRPPLTSIPVS--TTTVASSEINTLSTTLADTRTPVTTYSQASSSPTT 1969
Query: 900 S------TPGFSALTTSSPSI 914
+ TP +S +T S+
Sbjct: 1970 ADGTSMPTPAYSEGSTPLTSM 1990
Score = 33.9 bits (76), Expect = 0.73
Identities = 55/281 (19%), Positives = 104/281 (37%), Gaps = 18/281 (6%)
Query: 562 PLPFLAASIKQEEAVSSCPFASQVPVKRQSSSSECHPPACEAAQLQPL----GNAHCVES 617
P+ + + +S+ P S P+ + +S PP E + G+
Sbjct: 989 PVSHTLVANSEASTLSTTPVDSNTPLTTSTEASS-PPPTAEGTSMPTSTPSEGSTPLTRM 1047
Query: 618 SDQTNVLSSTFLSPQCSPQHSPLGAVKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSP 677
T +++S+ S + V + S + + +P+S+ ++G S P
Sbjct: 1048 PVSTTMVASSETSTLSTTPADTSTPVTTYSQASSSSTTADGTSMPTSTYSEGSTPLTSVP 1107
Query: 678 ISSQVCTAQMAGLHSSDKVGPKFSIPSPTFSKSSSAISEVTQPPSYEDAVKQQMTRSQQM 737
+S+++ + A S+ V + + T + SS +E T P+ + S +
Sbjct: 1108 VSTRLVVSSEASTLSTTPVDTSIPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPV 1167
Query: 738 DELLDVLIESGEM---PADAREDHSCLQKVPKIPRSSRSPTAVLTK--PSASFEQASSGS 792
L V E+ + P D++ Q SS PTA +T S E+++ +
Sbjct: 1168 STTLVVSSEANTLSTTPVDSK-----TQVATSTEASSPPPTAEVTSMPTSTPGERSTPLT 1222
Query: 793 QIPFDPYATDSDEHLEVLLNSQSPLGKMSDVTLLKIGSEEP 833
+P S E + S SP+ + VT S P
Sbjct: 1223 SMPVRHTPVASSEASTL---STSPVDTSTPVTTSAETSSSP 1260
Score = 33.9 bits (76), Expect = 0.73
Identities = 88/440 (20%), Positives = 149/440 (33%), Gaps = 62/440 (14%)
Query: 325 EPNEQMVRNPNSSSTPLSNTPLSPVKNSFSGQTGVSSFKPGPLPPNLDDLKVSELRQQLR 384
E + P+ STPL++ +S + + S + VS+ P + S
Sbjct: 2737 EGTSMRISTPSDGSTPLTSILVSTLPVASSEASTVSTTAVDTSIPVTTSTEASSSPTTAE 2796
Query: 385 IRGLPVSG---TKTALMDRLRPFQDCSGNPVPNFGDITTVTFPV---TPNTLPNYQSSSS 438
+ +P S T T L + PV + T T PV TP T SSS
Sbjct: 2797 VTSMPTSTPSETSTPLTS-----MPVNHTPVASSEAGTLSTTPVDTSTPVTTSTKASSSP 2851
Query: 439 TSALSNGFYHFGSTSSSPPISPASSDLSVAGSLPDTFNDASPSFGLHPSPVHVCTEESLM 498
T+A PIS AS ++ S+P + + S S V T +
Sbjct: 2852 TTA----------EGIVVPISTASEGSTLLTSIPVSTTPVASSEASTLSTTPVDTSIPVT 2901
Query: 499 SSLNGGSVPSELDG----------LDSEKDKMLVEKQKVINELTWKLQQEQRQVE-ELRM 547
+S G S P+ +G + + +LV V L +
Sbjct: 2902 TSTEGSSSPTTAEGTSMPISTPSEVSTPLTSILVSTVPVAGSEASTLSTTPVDTRTPVTT 2961
Query: 548 QLQKQKRNNCSEKKPLPF-----------------LAASIKQEEAVSSCPFASQVPVKRQ 590
+ +E +P + + + +S P + PV
Sbjct: 2962 SAEASSSPTTAEGTSMPISTPGERRTPLTSMSVSTMPVASSEASTLSRTPADTSTPVTTS 3021
Query: 591 SSSSECHPPACEAAQLQPLGNAHCVESSDQTNVLSSTFLSPQCSPQHSPLGA-------- 642
+ +S P E + P+ + S+ T++ ST +P P+ S L
Sbjct: 3022 TEASS-SPTTAEGTGI-PI-STPSEGSTPLTSIPVST--TPVAIPEASTLSTTPVDSNSP 3076
Query: 643 VKSPQHISLPPSPNNPHFLPSSSGAQGEGHRVSSPISSQVCTAQMAGLHSSDKVGPKFSI 702
V + +S P+P +P S+ ++G P+S+ T+ S+ V +
Sbjct: 3077 VVTSTEVSSSPTPAEGTSMPISTYSEGSTPLTGVPVSTTPVTSSAISTLSTTPVDTSTPV 3136
Query: 703 PSPTFSKSSSAISEVTQPPS 722
+ T + SS SE T P+
Sbjct: 3137 TTSTEAHSSPTTSEGTSMPT 3156
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.126 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,152,191
Number of Sequences: 37866
Number of extensions: 2097080
Number of successful extensions: 13255
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 403
Number of HSP's that attempted gapping in prelim test: 10625
Number of HSP's gapped (non-prelim): 2135
length of query: 938
length of database: 18,247,518
effective HSP length: 112
effective length of query: 826
effective length of database: 14,006,526
effective search space: 11569390476
effective search space used: 11569390476
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.