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Search of human proteins with 239508933
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|239508933 PREDICTED: hypothetical protein [Homo sapiens]
(144 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|239743258 PREDICTED: hypothetical protein [Homo sapiens] 308 1e-84
gi|239508933 PREDICTED: hypothetical protein [Homo sapiens] 308 1e-84
gi|169170099 PREDICTED: similar to speedy homolog A [Homo sapiens] 165 1e-41
gi|239508919 PREDICTED: similar to speedy homolog A [Homo sapiens] 165 1e-41
gi|118601064 speedy homolog E3 [Homo sapiens] 135 1e-32
gi|239743254 PREDICTED: hypothetical protein XP_002342780 [Homo ... 119 7e-28
gi|239508929 PREDICTED: similar to Putative WBSCR19-like protein... 119 7e-28
gi|30795188 Williams Beuren syndrome chromosome region 19 protei... 103 4e-23
gi|194595492 speedy homolog E5 [Homo sapiens] 99 1e-21
gi|226246595 speedy homolog E6 [Homo sapiens] 92 2e-19
gi|239743297 PREDICTED: speedy homolog E6 [Homo sapiens] 92 2e-19
gi|239508980 PREDICTED: speedy homolog E6 (Xenopus laevis) [Homo... 92 2e-19
gi|71979927 speedy homolog E2 [Homo sapiens] 92 2e-19
gi|239743311 PREDICTED: similar to speedy homolog A isoform 1 [H... 91 3e-19
gi|239508994 PREDICTED: similar to speedy homolog A isoform 7 [H... 91 3e-19
gi|239743228 PREDICTED: WBSCR19-like protein 8-like isoform 2 [H... 87 4e-18
gi|239508903 PREDICTED: WBSCR19-like protein 8-like [Homo sapiens] 87 4e-18
gi|189303549 speedy homolog E4 [Homo sapiens] 57 5e-09
gi|239749560 PREDICTED: hypothetical protein XP_002347086 [Homo ... 32 0.24
gi|239743710 PREDICTED: hypothetical protein XP_002342931 [Homo ... 32 0.24
gi|197383784 zinc finger protein 213 [Homo sapiens] 31 0.31
gi|32698678 zinc finger protein 213 [Homo sapiens] 31 0.31
gi|239755939 PREDICTED: hypothetical protein [Homo sapiens] 31 0.41
gi|239750466 PREDICTED: hypothetical protein [Homo sapiens] 31 0.41
gi|239744760 PREDICTED: hypothetical protein XP_002343262 [Homo ... 31 0.41
gi|38371739 RAB15, member RAS onocogene family [Homo sapiens] 30 0.54
gi|93004074 zinc finger protein 215 [Homo sapiens] 30 0.54
gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo ... 30 0.91
gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo ... 30 0.91
gi|148596977 zinc finger protein 31 [Homo sapiens] 30 0.91
>gi|239743258 PREDICTED: hypothetical protein [Homo sapiens]
Length = 144
Score = 308 bits (789), Expect = 1e-84
Identities = 144/144 (100%), Positives = 144/144 (100%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 60
MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFF
Sbjct: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 60
Query: 61 CSMRCRAWVSLEELEEVGGAWGRGGCGEESGGLEAGRGERGVSWGVPVFSKRVCFSRSRL 120
CSMRCRAWVSLEELEEVGGAWGRGGCGEESGGLEAGRGERGVSWGVPVFSKRVCFSRSRL
Sbjct: 61 CSMRCRAWVSLEELEEVGGAWGRGGCGEESGGLEAGRGERGVSWGVPVFSKRVCFSRSRL 120
Query: 121 MTQSTGCGREIAPTFPRAPGTVEA 144
MTQSTGCGREIAPTFPRAPGTVEA
Sbjct: 121 MTQSTGCGREIAPTFPRAPGTVEA 144
>gi|239508933 PREDICTED: hypothetical protein [Homo sapiens]
Length = 144
Score = 308 bits (789), Expect = 1e-84
Identities = 144/144 (100%), Positives = 144/144 (100%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 60
MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFF
Sbjct: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 60
Query: 61 CSMRCRAWVSLEELEEVGGAWGRGGCGEESGGLEAGRGERGVSWGVPVFSKRVCFSRSRL 120
CSMRCRAWVSLEELEEVGGAWGRGGCGEESGGLEAGRGERGVSWGVPVFSKRVCFSRSRL
Sbjct: 61 CSMRCRAWVSLEELEEVGGAWGRGGCGEESGGLEAGRGERGVSWGVPVFSKRVCFSRSRL 120
Query: 121 MTQSTGCGREIAPTFPRAPGTVEA 144
MTQSTGCGREIAPTFPRAPGTVEA
Sbjct: 121 MTQSTGCGREIAPTFPRAPGTVEA 144
>gi|169170099 PREDICTED: similar to speedy homolog A [Homo sapiens]
Length = 265
Score = 165 bits (417), Expect = 1e-41
Identities = 75/77 (97%), Positives = 76/77 (98%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 60
MEEDDEAPKQNIFYFLYEETRSHIPLL ELWFQLCRYMNPRARKNCSQIALFRKYRFHFF
Sbjct: 171 MEEDDEAPKQNIFYFLYEETRSHIPLLRELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 230
Query: 61 CSMRCRAWVSLEELEEV 77
CSMRCRAWVSLEELEE+
Sbjct: 231 CSMRCRAWVSLEELEEI 247
>gi|239508919 PREDICTED: similar to speedy homolog A [Homo sapiens]
Length = 265
Score = 165 bits (417), Expect = 1e-41
Identities = 75/77 (97%), Positives = 76/77 (98%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 60
MEEDDEAPKQNIFYFLYEETRSHIPLL ELWFQLCRYMNPRARKNCSQIALFRKYRFHFF
Sbjct: 171 MEEDDEAPKQNIFYFLYEETRSHIPLLRELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 230
Query: 61 CSMRCRAWVSLEELEEV 77
CSMRCRAWVSLEELEE+
Sbjct: 231 CSMRCRAWVSLEELEEI 247
>gi|118601064 speedy homolog E3 [Homo sapiens]
Length = 172
Score = 135 bits (340), Expect = 1e-32
Identities = 63/77 (81%), Positives = 67/77 (87%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 60
MEEDDEAPKQ IFYFLY +T SHIPL + WFQLCR MNPRARKNCSQIALF+K RF FF
Sbjct: 78 MEEDDEAPKQKIFYFLYGKTHSHIPLRPKHWFQLCRPMNPRARKNCSQIALFQKRRFQFF 137
Query: 61 CSMRCRAWVSLEELEEV 77
CSMRCRAWVS EELEE+
Sbjct: 138 CSMRCRAWVSPEELEEI 154
>gi|239743254 PREDICTED: hypothetical protein XP_002342780 [Homo
sapiens]
Length = 575
Score = 119 bits (299), Expect = 7e-28
Identities = 59/77 (76%), Positives = 63/77 (81%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 60
MEEDDE PKQNIFYFLY +TRS IPL+ FQLCR MNPRARKN SQIALF+K RF FF
Sbjct: 481 MEEDDEDPKQNIFYFLYGKTRSRIPLVRNRRFQLCRCMNPRARKNRSQIALFQKLRFQFF 540
Query: 61 CSMRCRAWVSLEELEEV 77
CSM RAWVS EELEE+
Sbjct: 541 CSMSGRAWVSREELEEI 557
>gi|239508929 PREDICTED: similar to Putative WBSCR19-like protein 7
[Homo sapiens]
Length = 575
Score = 119 bits (299), Expect = 7e-28
Identities = 59/77 (76%), Positives = 63/77 (81%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 60
MEEDDE PKQNIFYFLY +TRS IPL+ FQLCR MNPRARKN SQIALF+K RF FF
Sbjct: 481 MEEDDEDPKQNIFYFLYGKTRSRIPLVRNRRFQLCRCMNPRARKNRSQIALFQKLRFQFF 540
Query: 61 CSMRCRAWVSLEELEEV 77
CSM RAWVS EELEE+
Sbjct: 541 CSMSGRAWVSREELEEI 557
>gi|30795188 Williams Beuren syndrome chromosome region 19 protein
[Homo sapiens]
Length = 336
Score = 103 bits (258), Expect = 4e-23
Identities = 57/102 (55%), Positives = 63/102 (61%), Gaps = 25/102 (24%)
Query: 1 MEEDDEAPKQNIFYFLY-------------------------EETRSHIPLLSELWFQLC 35
MEEDDE KQNIF+FLY + RSHIPL+ + FQL
Sbjct: 217 MEEDDEDSKQNIFHFLYGKNRSRIPLLRKRRFQLYRSMNPRARKNRSHIPLVRKRRFQLR 276
Query: 36 RYMNPRARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEV 77
R MNPRARKN SQI LF+K RFHFFCSM CRAWVS EELEE+
Sbjct: 277 RCMNPRARKNRSQIVLFQKRRFHFFCSMSCRAWVSPEELEEI 318
>gi|194595492 speedy homolog E5 [Homo sapiens]
Length = 337
Score = 99.0 bits (245), Expect = 1e-21
Identities = 56/102 (54%), Positives = 61/102 (59%), Gaps = 25/102 (24%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNP-------------------- 40
MEEDDE KQNIF+FLY + RS IPLL + WFQL R MNP
Sbjct: 218 MEEDDEDSKQNIFHFLYGKNRSRIPLLRKRWFQLGRSMNPRARKNRSRIPLLRKRRFQLG 277
Query: 41 -----RARKNCSQIALFRKYRFHFFCSMRCRAWVSLEELEEV 77
RARKN SQI LF+K RF FFCSM RAWVS EELEE+
Sbjct: 278 RSMNLRARKNRSQIVLFQKRRFQFFCSMSGRAWVSPEELEEI 319
>gi|226246595 speedy homolog E6 [Homo sapiens]
Length = 402
Score = 91.7 bits (226), Expect = 2e-19
Identities = 57/127 (44%), Positives = 62/127 (48%), Gaps = 50/127 (39%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARK---------------- 44
MEEDDE KQNIF+FLY + RS IPLL + WFQL MNPRARK
Sbjct: 258 MEEDDEDSKQNIFHFLYRKNRSRIPLLRKRWFQLGHSMNPRARKNRSRIPLLRKRRFQLY 317
Query: 45 ----------------------------------NCSQIALFRKYRFHFFCSMRCRAWVS 70
N SQI LF+K RFHFFCSM CRAWVS
Sbjct: 318 RSTNPRARKNRSRIPLLRKRRFQLYRSMNSRARKNRSQIVLFQKRRFHFFCSMSCRAWVS 377
Query: 71 LEELEEV 77
EELEE+
Sbjct: 378 PEELEEI 384
>gi|239743297 PREDICTED: speedy homolog E6 [Homo sapiens]
Length = 402
Score = 91.7 bits (226), Expect = 2e-19
Identities = 57/127 (44%), Positives = 62/127 (48%), Gaps = 50/127 (39%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARK---------------- 44
MEEDDE KQNIF+FLY + RS IPLL + WFQL MNPRARK
Sbjct: 258 MEEDDEDSKQNIFHFLYRKNRSRIPLLRKRWFQLGHSMNPRARKNRSRIPLLRKRRFQLY 317
Query: 45 ----------------------------------NCSQIALFRKYRFHFFCSMRCRAWVS 70
N SQI LF+K RFHFFCSM CRAWVS
Sbjct: 318 RSTNPRARKNRSRIPLLRKRRFQLYRSMNSRARKNRSQIVLFQKRRFHFFCSMSCRAWVS 377
Query: 71 LEELEEV 77
EELEE+
Sbjct: 378 PEELEEI 384
>gi|239508980 PREDICTED: speedy homolog E6 (Xenopus laevis) [Homo
sapiens]
Length = 402
Score = 91.7 bits (226), Expect = 2e-19
Identities = 57/127 (44%), Positives = 62/127 (48%), Gaps = 50/127 (39%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARK---------------- 44
MEEDDE KQNIF+FLY + RS IPLL + WFQL MNPRARK
Sbjct: 258 MEEDDEDSKQNIFHFLYRKNRSRIPLLRKRWFQLGHSMNPRARKNRSRIPLLRKRRFQLY 317
Query: 45 ----------------------------------NCSQIALFRKYRFHFFCSMRCRAWVS 70
N SQI LF+K RFHFFCSM CRAWVS
Sbjct: 318 RSTNPRARKNRSRIPLLRKHRFQLYRSMNSRARKNRSQIVLFQKRRFHFFCSMSCRAWVS 377
Query: 71 LEELEEV 77
EELEE+
Sbjct: 378 PEELEEI 384
>gi|71979927 speedy homolog E2 [Homo sapiens]
Length = 258
Score = 91.7 bits (226), Expect = 2e-19
Identities = 57/127 (44%), Positives = 62/127 (48%), Gaps = 50/127 (39%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARK---------------- 44
MEEDDE KQNIF+FLY + RS IPLL + WFQL MNPRARK
Sbjct: 114 MEEDDEDSKQNIFHFLYRKNRSRIPLLRKRWFQLGHSMNPRARKNRSRIPLLRKRRFQLY 173
Query: 45 ----------------------------------NCSQIALFRKYRFHFFCSMRCRAWVS 70
N SQI LF+K RFHFFCSM CRAWVS
Sbjct: 174 RSTNPRARKNRSRIPLLRKRRFQLYRSMNSRARKNRSQIVLFQKRRFHFFCSMSCRAWVS 233
Query: 71 LEELEEV 77
EELEE+
Sbjct: 234 PEELEEI 240
>gi|239743311 PREDICTED: similar to speedy homolog A isoform 1 [Homo
sapiens]
Length = 402
Score = 91.3 bits (225), Expect = 3e-19
Identities = 57/127 (44%), Positives = 62/127 (48%), Gaps = 50/127 (39%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARK---------------- 44
MEEDDE KQNIF+FLY + RS IPLL + WFQL MNPRARK
Sbjct: 258 MEEDDEDSKQNIFHFLYRKNRSRIPLLRKPWFQLGHSMNPRARKNRSRIPLLRKRRFQLY 317
Query: 45 ----------------------------------NCSQIALFRKYRFHFFCSMRCRAWVS 70
N SQI LF+K RFHFFCSM CRAWVS
Sbjct: 318 RSTNPRARKNRSRIPLLRKRRFQLYRSMNSRARKNRSQIVLFQKRRFHFFCSMSCRAWVS 377
Query: 71 LEELEEV 77
EELEE+
Sbjct: 378 PEELEEI 384
>gi|239508994 PREDICTED: similar to speedy homolog A isoform 7 [Homo
sapiens]
Length = 402
Score = 91.3 bits (225), Expect = 3e-19
Identities = 57/127 (44%), Positives = 62/127 (48%), Gaps = 50/127 (39%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARK---------------- 44
MEEDDE KQNIF+FLY + RS IPLL + WFQL MNPRARK
Sbjct: 258 MEEDDEDSKQNIFHFLYRKNRSRIPLLRKPWFQLGHSMNPRARKNRSRIPLLRKRRFQLY 317
Query: 45 ----------------------------------NCSQIALFRKYRFHFFCSMRCRAWVS 70
N SQI LF+K RFHFFCSM CRAWVS
Sbjct: 318 RSTNPRARKNRSRIPLLRKRRFQLYRSMNSRARKNRSQIVLFQKRRFHFFCSMSCRAWVS 377
Query: 71 LEELEEV 77
EELEE+
Sbjct: 378 PEELEEI 384
>gi|239743228 PREDICTED: WBSCR19-like protein 8-like isoform 2 [Homo
sapiens]
Length = 402
Score = 87.4 bits (215), Expect = 4e-18
Identities = 57/127 (44%), Positives = 62/127 (48%), Gaps = 50/127 (39%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRY----------------------- 37
MEEDDE KQNIF+FLY +TRS IPLL + WFQL R
Sbjct: 258 MEEDDEDSKQNIFHFLYGKTRSRIPLLRKRWFQLGRSMNPRARKNRSRIPLLRKRRFQLG 317
Query: 38 ---------------------------MNPRARKNCSQIALFRKYRFHFFCSMRCRAWVS 70
MNPRARKN SQI LF+K RF FFCSM RAWVS
Sbjct: 318 RSMNPRARKYRSRIPLVRKRRFQLRRCMNPRARKNRSQIVLFQKLRFQFFCSMSGRAWVS 377
Query: 71 LEELEEV 77
EELEE+
Sbjct: 378 PEELEEI 384
>gi|239508903 PREDICTED: WBSCR19-like protein 8-like [Homo sapiens]
Length = 402
Score = 87.4 bits (215), Expect = 4e-18
Identities = 57/127 (44%), Positives = 62/127 (48%), Gaps = 50/127 (39%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRY----------------------- 37
MEEDDE KQNIF+FLY +TRS IPLL + WFQL R
Sbjct: 258 MEEDDEDSKQNIFHFLYGKTRSRIPLLRKRWFQLGRSMNPRARKNRSRIPLLRKRRFQLG 317
Query: 38 ---------------------------MNPRARKNCSQIALFRKYRFHFFCSMRCRAWVS 70
MNPRARKN SQI LF+K RF FFCSM RAWVS
Sbjct: 318 RSMNPRARKYRSRIPLVRKRRFQLRRCMNPRARKNRSQIVLFQKLRFQFFCSMSGRAWVS 377
Query: 71 LEELEEV 77
EELEE+
Sbjct: 378 PEELEEI 384
>gi|189303549 speedy homolog E4 [Homo sapiens]
Length = 237
Score = 57.0 bits (136), Expect = 5e-09
Identities = 33/77 (42%), Positives = 39/77 (50%), Gaps = 25/77 (32%)
Query: 1 MEEDDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFF 60
MEED++APKQ+IF FLY KN SQ LF K R+
Sbjct: 168 MEEDNQAPKQDIFSFLYG-------------------------KNYSQRPLFHKLRYQLL 202
Query: 61 CSMRCRAWVSLEELEEV 77
CSMR R WVS EE+EE+
Sbjct: 203 CSMRWRTWVSPEEMEEI 219
>gi|239749560 PREDICTED: hypothetical protein XP_002347086 [Homo
sapiens]
Length = 443
Score = 31.6 bits (70), Expect = 0.24
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Query: 83 RGGCGEESGGLEAGRGERGVSWG-VPVFSKRVCFSRSRLMTQSTGCGREI 131
R CG GG AG+G RG +WG PV S + T S GC E+
Sbjct: 86 RAACGGRGGGTRAGQGGRG-AWGEAPVGSAALSSP-----TASPGCSEEV 129
>gi|239743710 PREDICTED: hypothetical protein XP_002342931 [Homo
sapiens]
Length = 522
Score = 31.6 bits (70), Expect = 0.24
Identities = 20/50 (40%), Positives = 24/50 (48%), Gaps = 7/50 (14%)
Query: 83 RGGCGEESGGLEAGRGERGVSWG-VPVFSKRVCFSRSRLMTQSTGCGREI 131
R CG GG AG+G RG +WG PV S + T S GC E+
Sbjct: 86 RAACGGRGGGTRAGQGGRG-AWGEAPVGSAALSSP-----TASPGCSEEV 129
>gi|197383784 zinc finger protein 213 [Homo sapiens]
Length = 459
Score = 31.2 bits (69), Expect = 0.31
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 14/111 (12%)
Query: 4 DDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSM 63
D EA +Q F Y + S+LW CR++ P R + L +F
Sbjct: 40 DSEACRQRFRQFCYGDVHGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPG 99
Query: 64 RCRAWVS-------------LEELE-EVGGAWGRGGCGEESGGLEAGRGER 100
+ WV +E+L+ + AW + EE+ AGRG +
Sbjct: 100 EIQGWVREQHPGSGEEAVALVEDLQKQPVKAWRQDVPSEEAEPEAAGRGSQ 150
>gi|32698678 zinc finger protein 213 [Homo sapiens]
Length = 459
Score = 31.2 bits (69), Expect = 0.31
Identities = 27/111 (24%), Positives = 42/111 (37%), Gaps = 14/111 (12%)
Query: 4 DDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSM 63
D EA +Q F Y + S+LW CR++ P R + L +F
Sbjct: 40 DSEACRQRFRQFCYGDVHGPHEAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPG 99
Query: 64 RCRAWVS-------------LEELE-EVGGAWGRGGCGEESGGLEAGRGER 100
+ WV +E+L+ + AW + EE+ AGRG +
Sbjct: 100 EIQGWVREQHPGSGEEAVALVEDLQKQPVKAWRQDVPSEEAEPEAAGRGSQ 150
>gi|239755939 PREDICTED: hypothetical protein [Homo sapiens]
Length = 313
Score = 30.8 bits (68), Expect = 0.41
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 79 GAWGRGGCGEESGGLEAG--RGERGVSWGVPV 108
G W GG G +GGL AG R +RGV G PV
Sbjct: 96 GTWQLGGSGCGAGGLSAGRVREKRGVGAGGPV 127
>gi|239750466 PREDICTED: hypothetical protein [Homo sapiens]
Length = 351
Score = 30.8 bits (68), Expect = 0.41
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 79 GAWGRGGCGEESGGLEAG--RGERGVSWGVPV 108
G W GG G +GGL AG R +RGV G PV
Sbjct: 96 GTWQLGGSGCGAGGLSAGRVREKRGVGAGGPV 127
>gi|239744760 PREDICTED: hypothetical protein XP_002343262 [Homo
sapiens]
Length = 351
Score = 30.8 bits (68), Expect = 0.41
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 79 GAWGRGGCGEESGGLEAG--RGERGVSWGVPV 108
G W GG G +GGL AG R +RGV G PV
Sbjct: 96 GTWQLGGSGCGAGGLSAGRVREKRGVGAGGPV 127
>gi|38371739 RAB15, member RAS onocogene family [Homo sapiens]
Length = 208
Score = 30.4 bits (67), Expect = 0.54
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 6/58 (10%)
Query: 68 WVSLEELEEVGGAWGRGGCGEESGGLEAGRGERGVSWGVPVFSKRVCFSRSRLMTQST 125
WVS +++EVG A GCGE G G+ RG G S+++C + + T T
Sbjct: 102 WVS--DVDEVGDATSLPGCGE---GASPGKARRGPD-GKANASRKLCLPQPWMKTSGT 153
>gi|93004074 zinc finger protein 215 [Homo sapiens]
Length = 517
Score = 30.4 bits (67), Expect = 0.54
Identities = 18/69 (26%), Positives = 28/69 (40%)
Query: 4 DDEAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSM 63
D EA +Q +F Y + LS+LW +++ P I L +F
Sbjct: 43 DSEASRQKFRHFQYLKVSGPHEALSQLWELCLQWLRPEIHTKKQIIELLVLEQFLAILPE 102
Query: 64 RCRAWVSLE 72
R WV+L+
Sbjct: 103 EVRTWVNLQ 111
>gi|239757337 PREDICTED: hypothetical protein XP_002345251 [Homo
sapiens]
Length = 330
Score = 29.6 bits (65), Expect = 0.91
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 12/62 (19%)
Query: 79 GAWGRGGCGEESGGLEAGRGERGVSWGVPVFSKRVCFSRSRLMTQSTGCGREIAPTFPRA 138
G+ RG CG AG G+ WG P R + Q GCGRE + FP
Sbjct: 193 GSQTRGNCGA------AGSGDP--RWGDP----RPGEGFTARFLQPRGCGREFSGPFPSR 240
Query: 139 PG 140
PG
Sbjct: 241 PG 242
>gi|239751874 PREDICTED: hypothetical protein XP_002348034 [Homo
sapiens]
Length = 330
Score = 29.6 bits (65), Expect = 0.91
Identities = 22/62 (35%), Positives = 26/62 (41%), Gaps = 12/62 (19%)
Query: 79 GAWGRGGCGEESGGLEAGRGERGVSWGVPVFSKRVCFSRSRLMTQSTGCGREIAPTFPRA 138
G+ RG CG AG G+ WG P R + Q GCGRE + FP
Sbjct: 193 GSQTRGNCGA------AGSGDP--RWGDP----RPGEGFTARFLQPRGCGREFSGPFPSR 240
Query: 139 PG 140
PG
Sbjct: 241 PG 242
>gi|148596977 zinc finger protein 31 [Homo sapiens]
Length = 1043
Score = 29.6 bits (65), Expect = 0.91
Identities = 17/70 (24%), Positives = 25/70 (35%)
Query: 6 EAPKQNIFYFLYEETRSHIPLLSELWFQLCRYMNPRARKNCSQIALFRKYRFHFFCSMRC 65
EA +Q F Y + S+LW CR++ P R + L +F
Sbjct: 48 EASRQRFRQFQYRDAAGPHEAFSQLWALCCRWLRPEIRLKEQILELLVLEQFLTILPREV 107
Query: 66 RAWVSLEELE 75
+ WV E
Sbjct: 108 QTWVQARHPE 117
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.324 0.139 0.459
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,561,546
Number of Sequences: 37866
Number of extensions: 298498
Number of successful extensions: 1198
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1064
Number of HSP's gapped (non-prelim): 141
length of query: 144
length of database: 18,247,518
effective HSP length: 92
effective length of query: 52
effective length of database: 14,763,846
effective search space: 767719992
effective search space used: 767719992
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.